Pregenerated sensors for FGF20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031603Ensembl transcript IDs: ENSMUST00000034014.14, ENSMUST00000118639.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGAGACATGCGGCGTCAGCAGCAAGGTTCACATTATCCGCAGATaGACTGATTTCAGCATCGTCAGTCTACTGGTAAGACTGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: PETCGVSSKVHIIRR*TDFSIVSLLVRLKQ Trigger: TTGTTTCAGTCTTACCAGTAGACTGACGATGCTGAAATCAGTTCATCTGCGGATAATGTGAACCTTGCTGCTGACGCCGCATGTCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| 3UTR TCA 90 bp | GTTAATTCCTTACTCTCAATTTTCTTCCCAAATAGAGTCTTTCAGTaGAAAGCAGACTCCCGTAATATCCTGAACGTCTTCTTCGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: VNSLLSIFFPNRVFQ*KADSRNILNVFFGV Trigger: AACACCGAAGAAGACGTTCAGGATATTACGGGAGTCTGCTTTTCACTGAAAGACTCTATTTGGGAAGAAAATTGAGAGTAAGGAATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| 3UTR-3UTR TCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAAATAGAGTCTTTCAGTaGAAAGCAGACTCCCGTAAT | + |
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Preference number: 2 (lower is better) Translates to: ENDLALLQVNSLLSIFFPNRVFQ*KADSRN Trigger: ATTACGGGAGTCTGCTTTTCACTGAAAGACTCTATT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| 3UTR TCA 72 bp | TGCGGCGTCAGCAGCAAGGTTCACATTATCCGCAGATaGACTGATTTCAGCATCGTCAGTCTACTGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: CGVSSKVHIIRR*TDFSIVSLLVR Trigger: TCTTACCAGTAGACTGACGATGCTGAAATCAGTTCATCTGCGGATAATGTGAACCTTGCTGCTGACGCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| 3UTR TCA 72 bp | CGTCAGCAGCAAGGTTCACATTATCCGCAGATGAACTaGTTTCAGCATCGTCAGTCTACTGGTAAGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: RQQQGSHYPQMN*FQHRQSTGKTE Trigger: TTCAGTCTTACCAGTAGACTGACGATGCTGAAATCAGTTCATCTGCGGATAATGTGAACCTTGCTGCTGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| 3UTR TCA 72 bp | TTACTCTCAATTTTCTTCCCAAATAGAGTCTTTCAGTaGAAAGCAGACTCCCGTAATATCCTGAACGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LLSIFFPNRVFQ*KADSRNILNVF Trigger: GAAGACGTTCAGGATATTACGGGAGTCTGCTTTTCACTGAAAGACTCTATTTGGGAAGAAAATTGAGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAGCCGGCGGCGCAGGATaGCGTGCAGGTGCGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPAGGAG*RAGAPA Trigger: AGCTGGCGCACCTGCACGGCATCCTGCGCCGCCGGC...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCATCCTGCCGGGTGCCCTaGACGGTGCCGTCGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPSCRVP*TVPSGR Trigger: CCTGCCCGACGGCACCGTGCAGGGCACCCGGCAGGA...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAGGGTGCCCTGCACGGTaGCGTCGGGCAGGATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPGCPAR*RRAGSA Trigger: TGCAGATCCTGCCCGACGGCACCGTGCAGGGCACCC...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCATGTGATCCTGCCGGGTaGCCTGCACGGTGCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPCDPAG*PARCRR Trigger: CCGACGGCACCGTGCAGGGCACCCGGCAGGATCACA...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR CCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCATGCGACCCCACCTGCTaGCTCAAGCCCTCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPCDPTC*LKPSRP Trigger: CGGCCTGGAGGGCTTGAGCCAGCAGGTGGGGTCGCA...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAAGGATGCCGTGCAGGTaGGCCAGCTCCACGGAACCG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPRMPCR*ASSTEP Trigger: CGGTTCCGTGGAGCTGGCGCACCTGCACGGCATCCT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAAAGTGCGACCCCACCTaGTGGCTCAAGCCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPKCDPT*WLKPSR Trigger: CCTGGAGGGCTTGAGCCAGCAGGTGGGGTCGCACTT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAGGAGGCAGCAAGAAGTaGGACCCCACCTGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPGGSKK*DPTCWL Trigger: GAGCCAGCAGGTGGGGTCGCACTTCTTGCTGCCTCC...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCACGGTGGCCTCTCCCCTaGAGGAGGCAGCAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPRWPLP*RRQQEV Trigger: CACTTCTTGCTGCCTCCTGCAGGGGAGAGGCCACCG...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR TCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAATACCGAAGAGACTGTaGTCCTGCCGGGTGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPIPKRL*SCRVPC Trigger: GCAGGGCACCCGGCAGGATCACAGTCTCTTCGGTAT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAACTGACCAGTCCCACTaGCACACTGATGAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPTDQSH*HTDEFQ Trigger: CTGGAATTCATCAGTGTGGCAGTGGGACTGGTCAGT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAGTGCTACAAAATACCTaGGACCCGTGTCTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPVLQNT*DPCLHV Trigger: AACATGGAGACACGGGTCGCAGGTATTTTGTAGCAC...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR TCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAAAGTGGGTAAACTTTTaGTGTCTTTTGGACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPKWVNF*CLLDLA Trigger: TGCCAGGTCCAAAAGACATCAAAAGTTTACCCACTT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR GCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCATCCATCCTTGTTAAGTaGTACAAAATACCTGCGACC | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPSILVK*YKIPAT Trigger: GGTCGCAGGTATTTTGTAGCACTTAACAAGGATGGA...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR TCA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCACTTCAAATTGTTCCCTaGAGATGCATTCAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ENDLALLQVNSLLSIFFPLQIVP*RCIQKS Trigger: TGACTTCTGAATGCATCTTCAGGGAACAATTTGAAG...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS GCA 90 bp | TCTTTTGGACCTGGCACCATCTCTTGGAGTTCCATCCTTGTTAAGTaGTACAAAATACCTGCGACCCGTGTCTCCATGTTTATATATGTT | + |
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Preference number: 5 (lower is better) Translates to: SFGPGTISWSSILVK*YKIPATRVSMFIYV Trigger: AACATATATAAACATGGAGACACGGGTCGCAGGTATTTTGTAGCACTTAACAAGGATGGAACTCCAAGAGATGGTGCCAGGTCCAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034014.14 ENSMUST00000118639.2 |
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| CDS-3UTR CAA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCAAAAGTGGGTAAACTTTaGATGTCTTTTGGACCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ENDLALLQVNSLLSIFFPKVGKL*MSFGPG Trigger: GCCAGGTCCAAAAGACATCAAAAGTTTACCCACTTT...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS-3UTR CAA 90 bp | GAGAATGATCTTGCTTTGCTTCAAGTTAATTCCTTACTCTCAATTTTCTTCCCACTTGGAGTTCCATCCTaGTTAAGTGCTACAAAATAC | + |
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Preference number: 5 (lower is better) Translates to: ENDLALLQVNSLLSIFFPLGVPS*LSATKY Trigger: GTATTTTGTAGCACTTAACAAGGATGGAACTCCAAG...TGGGAAGAAAATTGAGAGTAAGGAATTAACTTGAAGCAAAGCAAGATCATTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS GCA 72 bp | GGGACGGCTCCCGGGATGTCGGGCCGGCCCTTCTCCTaGCGGGAGGAGGACGAGGGGGCCGTCGCGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTAPGMSGRPFS*REEDEGAVAEA Trigger: CGCCTCCGCGACGGCCCCCTCGTCCTCCTCCCGGCAGGAGAAGGGCCGGCCCGACATCCCGGGAGCCGTCCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118639.2 |
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| CDS GCA 72 bp | CACACTGATGAATTCCAGGATACCGTGGGGGCGGCCTaGGGGGACGGCTCCCGGGATGTCGGGCCGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: HTDEFQDTVGAA*GDGSRDVGPAL Trigger: AAGGGCCGGCCCGACATCCCGGGAGCCGTCCCCGCAGGCCGCCCCCACGGTATCCTGGAATTCATCAGTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118639.2 |
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| CDS GCA 72 bp | TCCCCTGCAGGAGGCAGCAAGAAGTGCGACCCCACCTaGTGGCTCAAGCCCTCCAGGCCGCCCAAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SPAGGSKKCDPT*WLKPSRPPKKA Trigger: GGCTTTCTTGGGCGGCCTGGAGGGCTTGAGCCAGCAGGTGGGGTCGCACTTCTTGCTGCCTCCTGCAGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS GCA 72 bp | ATTCCAGGATACCGAAGAGACTGTGATCCTGCCGGGTaGCCTGCACGGTGCCGTCGGGCAGGATCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IPGYRRDCDPAG*PARCRRAGSAG Trigger: ACCTGCAGATCCTGCCCGACGGCACCGTGCAGGGCACCCGGCAGGATCACAGTCTCTTCGGTATCCTGGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034014.14 |
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| CDS GCA 72 bp | CCTGGCACCATCTCTTGGAGTTCCATCCTTGTTAAGTaGTACAAAATACCTGCGACCCGTGTCTCCATGTTT | + |
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Preference number: 6 (lower is better) Translates to: PGTISWSSILVK*YKIPATRVSMF Trigger: AAACATGGAGACACGGGTCGCAGGTATTTTGTAGCACTTAACAAGGATGGAACTCCAAGAGATGGTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034014.14 ENSMUST00000118639.2 |
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| CDS CAA 72 bp | CTTTTGGACCTGGCACCATCTCTTGGAGTTCCATCCTaGTTAAGTGCTACAAAATACCTGCGACCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLDLAPSLGVPS*LSATKYLRPVS Trigger: AGACACGGGTCGCAGGTATTTTGTAGCACTTAACAAGGATGGAACTCCAAGAGATGGTGCCAGGTCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034014.14 ENSMUST00000118639.2 |
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