Pregenerated sensors for FGF18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057967Ensembl transcript IDs: ENSMUST00000020507.8, ENSMUST00000109363.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGAGAGAGGCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTaGGTCCTTTGTCATGGGGTTCAGGTCAACAGTGGAATCCTATCG | + |
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Preference number: 1 (lower is better) Translates to: LERGKHLWVDSGPLV*VLCHGVQVNSGILS Trigger: CGATAGGATTCCACTGTTGACCTGAACCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR TCA 90 bp | ACTTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATaGGTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: TLVSRSFLVQVLLWG*VLNCHLLERGKHLW Trigger: CCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGCAAGCACCTGTGGGTTaGCAGCGGTCCCCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PRSSPPLGMSFELSPPREQAPVG*QRSPCV Trigger: CACACAAGGGGACCGCTGTCAACCCACAGGTGCTTG...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAAAGAGGCAAGCACCTGTaGGTTGACAGCGGTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FGFSQFPRSSPPLGMSFERGKHL*VDSGPL Trigger: AAGGGGACCGCTGTCAACCCACAGGTGCTTGCCTCT...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR TCA 72 bp | GGCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTaGGTCCTTTGTCATGGGGTTCAGGTCAACAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: GKHLWVDSGPLV*VLCHGVQVNSG Trigger: TCCACTGTTGACCTGAACCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR TCA 72 bp | TTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGTTaGCAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGG | + |
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Preference number: 3 (lower is better) Translates to: LSPPRERQAPVG*QRSPCVSPLSW Trigger: CCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGGCAAGCACCTGTGGGTaGACAGCGGTCCCCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PRSSPPLGMSFELSPPREASTCG*TAVPLC Trigger: ACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAAGCAAGCACCTGTGGGTaGACAGCGGTCCCCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: FGFSQFPRSSPPLGMSFEASTCG*TAVPLC Trigger: ACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTCCTTGTGTGAGTCCTTaGTCATGGGGTTCAGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: PPLGMSFELSPPRERQAPPCVSP*SWGSGQ Trigger: TTGACCTGAACCCCATGACAAAGGACTCACACAAGG...AGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR CCA 72 bp | TGTGTGAGTCCTTTGTCATGGGGTTCAGGTCAACAGTaGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: CVSPLSWGSGQQ*NPIAPPPKTLG Trigger: ACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGAACCCCATGACAAAGGACTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR TCA 72 bp | TCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATaGGTTTTGAATTGTCACCTCCTAGAGAGAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: SRSFLVQVLLWG*VLNCHLLERGK Trigger: CTTGCCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGGGGGGTTCTCGCGGGTCTTaGGACCCTTGCGAGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: ASTCGLTAVPLCESFVMGGSRGS*DPCEAA Trigger: GGCGGCCTCGCAAGGGTCCCAAGACCCGCGAGAACC...CCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | GCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGGGGGCCGCCCCTTCTTGGTaGAGCCCACATACCAACCAG | + |
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Preference number: 4 (lower is better) Translates to: ASTCGLTAVPLCESFVMGAAPSW*SPHTNQ Trigger: CTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGC...CCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CCA 90 bp | CGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGGGTTCTCGCGGGTCTTaGGACCCTTGCGAGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RSSPPLGMSFELSPPRERGSRGS*DPCEAA Trigger: GGCGGCCTCGCAAGGGTCCCAAGACCCGCGAGAACC...CCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | AAGGACTTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTCCTCGCCACGGGCACTaGTCCTACGGCCCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: KDFGFSQFPRSSPPLGMSPRHGH*SYGPGL Trigger: AAGTCCTGGGCCGTAGGATCAGTGCCCGTGGCGAGG...ACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAAGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTGGGTCTTGGGACCCTTaGGAGGCCGCCCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVGSWDP*EAAPSW Trigger: CCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCC...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | GTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGTTGACAGCGGTGCCGCCCCTTCTTGGTaGAGCCCACATACCAACCAG | + |
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Preference number: 4 (lower is better) Translates to: VLNCHLLERGKHLWVDSGAAPSW*SPHTNQ Trigger: CTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGC...ACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGGGGAAGTGTACATCTTGCTaGTTCTCGCGGGTCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ASTCGLTAVPLCESFVMGKCTSC*FSRVLG Trigger: TCCCAAGACCCGCGAGAACCAGCAAGATGTACACTT...CCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| 3UTR CAA 72 bp | AGAGAGGCAAGCACCTGTGGGTTGACAGCGGTCCCCTaGTGTGAGTCCTTTGTCATGGGGTTCAGGTCAACA | + |
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Preference number: 4 (lower is better) Translates to: REASTCGLTAVP*CESFVMGFRST Trigger: TGTTGACCTGAACCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGCCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTCTGTCTCCTTGCCCTTaGTCCGGACTTGACTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PPLGMSFELSPPRERQAPLSPCP*SGLDSR Trigger: TCGGGAGTCAAGTCCGGATCAAGGGCAAGGAGACAG...AGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATCTCGAGCCCGCGTCTaGTTCTCCACGTGGATGCGG | + |
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Preference number: 4 (lower is better) Translates to: FGFSQFPRSSPPLGMSFESRARV*FSTWMR Trigger: CCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGA...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTGTCTCCACTAGGAGCTaGGCATACTTGTCCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVVSTRS*AYLSPS Trigger: GGACGGGGACAAGTATGCCCAGCTCCTAGTGGAGAC...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| 3UTR CAA 72 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATaGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PRSSPPLGMSFE*SPPRERQAPVG Trigger: ACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR GCA 90 bp | GTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGTTGACAGCGGTTATTTGAAGGGCTTCTaGAGCTCGGCCTGTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VLNCHLLERGKHLWVDSGYLKGF*SSACPL Trigger: CAAGGGACAGGCCGAGCTGCAGAAGCCCTTCAAATA...ACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CCA 90 bp | GTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGTTGACAGCGGTGTCTGGTTCTCCACGTaGATGCGGAAGTCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: VLNCHLLERGKHLWVDSGVWFST*MRKSTF Trigger: GAATGTGGACTTCCGCATCCACGTGGAGAACCAGAC...ACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CCA 90 bp | GTTTTGAATTGTCACCTCCTAGAGAGAGGCAAGCACCTGTGGGTTGACAGCGGTACCAACCAGAGTACTTaGCAGACATCAGGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLNCHLLERGKHLWVDSGTNQST*QTSGPC Trigger: ACACGGCCCTGATGTCTGCCAAGTACTCTGGTTGGT...ACCGCTGTCAACCCACAGGTGCTTGCCTCTCTCTAGGAGGTGACAATTCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATCGGCTGCCAACACCTaGACCTGGAAGCACAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FGFSQFPRSSPPLGMSFESAANT*TWKHSS Trigger: ACTGCTGTGCTTCCAGGTTCAGGTGTTGGCAGCCGA...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR TCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAACTACGGCCCAGGACTTaGATGTGCTTCCCACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FGFSQFPRSSPPLGMSFELRPRT*MCFPLV Trigger: GACCAGTGGGAAGCACATTCAAGTCCTGGGCCGTAG...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTGGTTCTCCACGTGGATaGGGAAGTCCACATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVGSPRG*GSPHSP Trigger: AGGAGAATGTGGACTTCCGCATCCACGTGGAGAACC...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTTATTTGAAGGGCTTCTaGAGCTCGGCCTGTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVYLKGF*SSACPL Trigger: CAAGGGACAGGCCGAGCTGCAGAAGCCCTTCAAATA...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTACCAACCAGAGTACTTaGCAGACATCAGGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVTNQST*QTSGPC Trigger: ACACGGCCCTGATGTCTGCCAAGTACTCTGGTTGGT...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR TCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAACCCTTGATCCGGACTTaGCTCCCGAAGGTATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FGFSQFPRSSPPLGMSFEPLIRT*LPKVSV Trigger: GACAGATACCTTCGGGAGTCAAGTCCGGATCAAGGG...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAAGTAAACACAGGCAAGTaGAGGCGGAGGGCGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FGFSQFPRSSPPLGMSFEVNTGK*RRRALN Trigger: ATTCAGCGCCCTCCGCCTGCACTTGCCTGTGTTTAC...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTCAACAGTGGAATCCTATCGCCCCTCCTCCCAAGACTTTAGGTTCAGTTTGGTACAAGCGCAGCTaGTTCCGACTCACATCATCT | + |
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Preference number: 4 (lower is better) Translates to: SGQQWNPIAPPPKTLGSVWYKRS*FRLTSS Trigger: AGATGATGTGAGTCGGAAGCAGCTGCGCTTGTACCA...AACTGAACCTAAAGTCTTGGGAGGAGGGGCGATAGGATTCCACTGTTGACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR GCA 90 bp | CGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGGCTTCCCCACGAGCTTaGCTTTTCGGTTCATACACA | + |
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Preference number: 4 (lower is better) Translates to: RSSPPLGMSFELSPPRERASPRA*LFGSYT Trigger: TGTGTATGAACCGAAAAGGCAAGCTCGTGGGGAAGC...CCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CCA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAAGTGTACATCTTGCTaGTTCTCGCGGGTCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PRSSPPLGMSFELSPPREKCTSC*FSRVLG Trigger: TCCCAAGACCCGCGAGAACCAGCAAGATGTACACTT...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR GCA 90 bp | CGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGATGAAGTGTACATCTTaGTGGTTCTCGCGGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RSSPPLGMSFELSPPRERMKCTS*WFSRVL Trigger: CAAGACCCGCGAGAACCAGCAAGATGTACACTTCAT...CCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR GCA 90 bp | AAGGACTTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTATGAAGTGTACATCTTaGTGGTTCTCGCGGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KDFGFSQFPRSSPPLGMSMKCTS*WFSRVL Trigger: CAAGACCCGCGAGAACCAGCAAGATGTACACTTCAT...ACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAAGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS TCA 90 bp | CCACTAGGAGCTGGGCATACTTGTCCCCGTCCTCGCCACGGGCACTaGTCCTACGGCCCAGGACTTGAATGTGCTTCCCACTGGTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PLGAGHTCPRPRHGH*SYGPGLECASHWSC Trigger: GCAGGACCAGTGGGAAGCACATTCAAGTCCTGGGCCGTAGGATCAGTGCCCGTGGCGAGGACGGGGACAAGTATGCCCAGCTCCTAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS TCA 90 bp | GGTTCTCGCGGGTCTTGGGACCCTTGCGAGGCCGCCCCTTCTTGGTaGAGCCCACATACCAACCAGAGTACTTGGCAGACATCAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: GSRGSWDPCEAAPSW*SPHTNQSTWQTSGP Trigger: CGGCCCTGATGTCTGCCAAGTACTCTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCGCGAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS CCA 90 bp | TACAAGCGCAGCTGCTTCCGACTCACATCATCTCGAGCCCGCGTCTaGTTCTCCACGTGGATGCGGAAGTCCACATTCTCCTCGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: YKRSCFRLTSSRARV*FSTWMRKSTFSSAA Trigger: GGCAGCCGAGGAGAATGTGGACTTCCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGATGATGTGAGTCGGAAGCAGCTGCGCTTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | GCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGGGGCGAGGCCGCCCCTTCTaGGTGAAGCCCACATACCAA | + |
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Preference number: 5 (lower is better) Translates to: ASTCGLTAVPLCESFVMGRGRPF*VKPTYQ Trigger: TTGGTATGTGGGCTTCACCAAGAAGGGGCGGCCTCG...CCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS GCA 90 bp | TCCGACTCACATCATCTCGAGCCCGCGTCTGGTTCTCCACGTGGATaGGGAAGTCCACATTCTCCTCGGCTGCCAACACCTGAACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SDSHHLEPASGSPRG*GSPHSPRLPTPEPG Trigger: TCCAGGTTCAGGTGTTGGCAGCCGAGGAGAATGTGGACTTCCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGATGATGTGAGTCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | GCAAGCACCTGTGGGTTGACAGCGGTCCCCTTGTGTGAGTCCTTTGTCATGGGGGGCTTCCCCACGAGCTaGCCTTTTCGGTTCATACAC | + |
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Preference number: 5 (lower is better) Translates to: ASTCGLTAVPLCESFVMGGFPTS*PFRFIH Trigger: GTGTATGAACCGAAAAGGCAAGCTCGTGGGGAAGCC...CCCCATGACAAAGGACTCACACAAGGGGACCGCTGTCAACCCACAGGTGCTTGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGCGGGTCTTGGGACCCTaGCGAGGCCGCCCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PRSSPPLGMSFELSPPRERVLGP*RGRPFL Trigger: CAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCG...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAACGGGTCTTGGGACCCTaGCGAGGCCGCCCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FGFSQFPRSSPPLGMSFERVLGP*RGRPFL Trigger: CAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCG...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CAA 90 bp | AAGGACTTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTCCTACGGCCCAGGACTaGAATGTGCTTCCCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: KDFGFSQFPRSSPPLGMSPTAQD*NVLPTG Trigger: ACCAGTGGGAAGCACATTCAAGTCCTGGGCCGTAGG...ACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGTACCAACCAGAGTACTaGGCAGACATCAGGGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: PRSSPPLGMSFELSPPREYQPEY*ADIRAV Trigger: CACGGCCCTGATGTCTGCCAAGTACTCTGGTTGGTA...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CAA 90 bp | CGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGAGGGTGACTGTGGTGTATTaGAAGGGCTTCTGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: RSSPPLGMSFELSPPRERVTVVY*KGFCSS Trigger: CGAGCTGCAGAAGCCCTTCAAATACACCACAGTCAC...CCTCTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS-3UTR CAA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGGTGACTGTGGTGTATTaGAAGGGCTTCTGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: PRSSPPLGMSFELSPPREVTVVY*KGFCSS Trigger: CGAGCTGCAGAAGCCCTTCAAATACACCACAGTCAC...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS TCA 90 bp | TGCCTTTTCGGTTCATACACAGGTAGAATTCTGTCTCCTTGCCCTTaGTCCGGACTTGACTCCCGAAGGTATCTGTCTCCACTAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: CLFGSYTGRILSPCP*SGLDSRRYLSPLGA Trigger: AGCTCCTAGTGGAGACAGATACCTTCGGGAGTCAAGTCCGGATCAAGGGCAAGGAGACAGAATTCTACCTGTGTATGAACCGAAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTTTCTCGCAGTTTCCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAAGCCCTTGATCCGGACTaGACTCCCGAAGGTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: FGFSQFPRSSPPLGMSFEALDPD*TPEGIC Trigger: ACAGATACCTTCGGGAGTCAAGTCCGGATCAAGGGC...TTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGGAAACTGCGAGAAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS-3UTR CAA 90 bp | CCTCGTTCAAGTCCTCCTCTGGGGATGAGTTTTGAATTGTCACCTCCTAGAGAGCATGAAGTGTACATCTaGCTGGTTCTCGCGGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: PRSSPPLGMSFELSPPREHEVYI*LVLAGL Trigger: AAGACCCGCGAGAACCAGCAAGATGTACACTTCATG...CTCTCTAGGAGGTGACAATTCAAAACTCATCCCCAGAGGAGGACTTGAACGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS TCA 72 bp | GCTGGGCATACTTGTCCCCGTCCTCGCCACGGGCACTaGTCCTACGGCCCAGGACTTGAATGTGCTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: AGHTCPRPRHGH*SYGPGLECASH Trigger: GTGGGAAGCACATTCAAGTCCTGGGCCGTAGGATCAGTGCCCGTGGCGAGGACGGGGACAAGTATGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS CAA 72 bp | CGGATCCGCCGGGATCGCTTGGTGACTGTGGTGTATTaGAAGGGCTTCTGCAGCTCGGCCTGTCCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RIRRDRLVTVVY*KGFCSSACPLG Trigger: CCCCAAGGGACAGGCCGAGCTGCAGAAGCCCTTCAAATACACCACAGTCACCAAGCGATCCCGGCGGATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS CAA 72 bp | TCGCGGGTCTTGGGACCCTTGCGAGGCCGCCCCTTCTaGGTGAAGCCCACATACCAACCAGAGTACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SRVLGPLRGRPF*VKPTYQPEYLA Trigger: TGCCAAGTACTCTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS CAA 90 bp | TGCTGGTTCTCGCGGGTCTTGGGACCCTTGCGAGGCCGCCCCTTCTaGGTGAAGCCCACATACCAACCAGAGTACTTGGCAGACATCAGG | + |
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Preference number: 6 (lower is better) Translates to: CWFSRVLGPLRGRPF*VKPTYQPEYLADIR Trigger: CCTGATGTCTGCCAAGTACTCTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCGCGAGAACCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS TCA 72 bp | GGGTCTTGGGACCCTTGCGAGGCCGCCCCTTCTTGGTaGAGCCCACATACCAACCAGAGTACTTGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: GSWDPCEAAPSW*SPHTNQSTWQT Trigger: TGTCTGCCAAGTACTCTGGTTGGTATGTGGGCTTCACCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS GCA 72 bp | CATCATCTCGAGCCCGCGTCTGGTTCTCCACGTGGATaGGGAAGTCCACATTCTCCTCGGCTGCCAACACCT | + |
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Preference number: 6 (lower is better) Translates to: HHLEPASGSPRG*GSPHSPRLPTP Trigger: AGGTGTTGGCAGCCGAGGAGAATGTGGACTTCCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGATGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS CCA 72 bp | CTCACATCATCTCGAGCCCGCGTCTGGTTCTCCACGTaGATGCGGAAGTCCACATTCTCCTCGGCTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LTSSRARVWFST*MRKSTFSSAAN Trigger: GTTGGCAGCCGAGGAGAATGTGGACTTCCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGATGATGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS CAA 72 bp | TGTACATCTTGCTGGTTCTCGCGGGTCTTGGGACCCTaGCGAGGCCGCCCCTTCTTGGTGAAGCCCACATAC | + |
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Preference number: 6 (lower is better) Translates to: CTSCWFSRVLGP*RGRPFLVKPTY Trigger: GTATGTGGGCTTCACCAAGAAGGGGCGGCCTCGCAAGGGTCCCAAGACCCGCGAGAACCAGCAAGATGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS CCA 72 bp | AGCTGCTTCCGACTCACATCATCTCGAGCCCGCGTCTaGTTCTCCACGTGGATGCGGAAGTCCACATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCFRLTSSRARV*FSTWMRKSTFS Trigger: GGAGAATGTGGACTTCCGCATCCACGTGGAGAACCAGACGCGGGCTCGAGATGATGTGAGTCGGAAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS TCA 72 bp | TCTGCAGCTCGGCCTGTCCCTTGGGGTAACGCTTCATaGAGTGTACATCTTGCTGGTTCTCGCGGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SAARPVPWGNAS*SVHLAGSRGSW Trigger: CCAAGACCCGCGAGAACCAGCAAGATGTACACTTCATGAAGCGTTACCCCAAGGGACAGGCCGAGCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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| CDS TCA 72 bp | GGTTCATACACAGGTAGAATTCTGTCTCCTTGCCCTTaGTCCGGACTTGACTCCCGAAGGTATCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GSYTGRILSPCP*SGLDSRRYLSP Trigger: TGGAGACAGATACCTTCGGGAGTCAAGTCCGGATCAAGGGCAAGGAGACAGAATTCTACCTGTGTATGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020507.8 |
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| CDS CAA 72 bp | TTGTTTTCCAGAACCTTCTCAATGAACACGCACTCCTaGCTAGTACCATCAGGCTTCCCCACGAGCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LFSRTFSMNTHS*LVPSGFPTSLP Trigger: AGGCAAGCTCGTGGGGAAGCCTGATGGTACTAGCAAGGAGTGCGTGTTCATTGAGAAGGTTCTGGAAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020507.8 ENSMUST00000109363.8 |
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