Pregenerated sensors for FGF16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031230Ensembl transcript IDs: ENSMUST00000033581.4
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATCTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATaGGAGATCTGCAGAGCCAGGGTAGGGATGGCTTGCAGCAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: ISPTSGGRKTACQDE*EICRARVGMACSRV Trigger: AACCCTGCTGCAAGCCATCCCTACCCTGGCTCTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR TCA 90 bp | TGGTCTTTCATTTGTACCCCCATTTCAAGGTATCTGGGTAGATTGTaGGGCAAGACAGCCTTGGCCCTTAATGGGGGCCCTTGTTCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: WSFICTPISRYLGRL*GKTALALNGGPCSL Trigger: CAAAGAACAAGGGCCCCCATTAAGGGCCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAATGAAAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR GCA 90 bp | CTAATTGATAGGAAGGAAGGATTGAAAAGCTATGAGTATAGTGTTTaGAGAGCCAACCATGGTCACAGAGTACATGGGTCACAGAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: LIDRKEGLKSYEYSV*RANHGHRVHGSQRW Trigger: CCACCTCTGTGACCCATGTACTCTGTGACCATGGTTGGCTCTGCAAACACTATACTCATAGCTTTTCAATCCTTCCTTCCTATCAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCACTGTGGCAGATTCCTTaGTCTTTCATTTGTACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LPLPVAGKLHVRTNERSALWQIP*SFICTP Trigger: GGGGGTACAAATGAAAGACCAAGGAATCTGCCACAG...TGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTACCCCCATTTCAAGGTATCTGGGTAGATTGTGAGGCAAGACAGCCTTGGTGGTCACAGAGTACATaGGTCACAGAGGTGGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: FVPPFQGIWVDCEARQPWWSQST*VTEVAP Trigger: TGGTGCCACCTCTGTGACCCATGTACTCTGTGACCA...CCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGCAGGGTTGGAGCCCCTAGGATTTTCCAAATAACACTTTCCCAGAGCTCTTTGCAGAGCCAACCATaGTCACAGAGTACATGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CSRVGAPRIFQITLSQSSLQSQP*SQSTWV Trigger: GACCCATGTACTCTGTGACCATGGTTGGCTCTGCAA...AGAGCTCTGGGAAAGTGTTATTTGGAAAATCCTAGGGGCTCCAACCCTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR TCA 90 bp | CACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGAGCGGTCACATTGAACAGTaGGTGCTTCTCTGTTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: HFRWQENCMSGRMRDLQSGHIEQ*VLLCYL Trigger: TAGATAACAGAGAAGCACTCACTGTTCAATGTGACC...GCTCTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGTATGAGTATAGTGTTTaGAGAGCCAACCATGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SHFRWQENCMSGRMRDLQYEYSV*RANHGH Trigger: GTGACCATGGTTGGCTCTGCAAACACTATACTCATA...CTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CCA 90 bp | CACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGAGCCCATTTCAAGGTATCTaGGTAGATTGTGAGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HFRWQENCMSGRMRDLQSPFQGI*VDCEAR Trigger: TCTTGCCTCACAATCTACCCAGATACCTTGAAATGG...GCTCTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCATGGCTTGCAGCAGGGTaGGAGCCCCTAGGATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPLPVAGKLHVRTNERSAWLAAG*EPLGFS Trigger: GGAAAATCCTAGGGGCTCCAACCCTGCTGCAAGCCA...TGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGACCTTGATATACACTTaGAACAAGGGGACAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SHFRWQENCMSGRMRDLQTLIYT*NKGTAG Trigger: CCCAGCTGTCCCCTTGTTCAAAGTGTATATCAAGGT...CTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR TCA 72 bp | ATTTGTACCCCCATTTCAAGGTATCTGGGTAGATTGTaGGGCAAGACAGCCTTGGCCCTTAATGGGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICTPISRYLGRL*GKTALALNGGP Trigger: AGGGCCCCCATTAAGGGCCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR CCA 72 bp | CAAGGTATCTGGGTAGATTGTGAGGCAAGACAGCCTTaGCCCTTAATGGGGGCCCTTGTTCTTTGTAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGIWVDCEARQP*PLMGALVLCNA Trigger: GGCATTACAAAGAACAAGGGCCCCCATTAAGGGCCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGTCCTTGGTCTTTCATTaGTACCCCCATTTCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ISHFRWQENCMSGRMRDLSLVFH*YPHFKV Trigger: TACCTTGAAATGGGGGTACAAATGAAAGACCAAGGA...CAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| 3UTR CCA 72 bp | CTTGGTCTTTCATTTGTACCCCCATTTCAAGGTATCTaGGTAGATTGTGAGGCAAGACAGCCTTGGCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGLSFVPPFQGI*VDCEARQPWPL Trigger: TAAGGGCCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAATGAAAGACCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR GCA 90 bp | TCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGTCGTGGCGGGTGCCGTaGACCGTGCCGTTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHFRWQENCMSGRMRDLQSWRVP*TVPLGK Trigger: CTTCCCCAACGGCACGGTGCACGGCACCCGCCACGA...CTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGGTGGGCGAAGTCTGTaGGCGAGCCGCGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPVAGKLHVRTNERSAGGRSL*ASRAAA Trigger: AGCTGCAGCGCGGCTCGCCCACAGACTTCGCCCACC...TGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAACCATGGTCACAGAGTACATGGGTCACAGAGGTGGCACCACAGGTCCAGGATCCCCTTCAGGTaGGCGAAGTCTGTGGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RANHGHRVHGSQRWHHRSRIPFR*AKSVGE Trigger: CTCGCCCACAGACTTCGCCCACCTGAAGGGGATCCT...GGACCTGTGGTGCCACCTCTGTGACCCATGTACTCTGTGACCATGGTTGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAATTCCGAAGCGGCTGTaGTCGTGGCGGGTGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPVAGKLHVRTNERSAIPKRL*SWRVPC Trigger: GCACGGCACCCGCCACGACCACAGCCGCTTCGGAAT...TGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGAGCTTCCCCTCGATCTaGCCCAGGCGCTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFRWQENCMSGRMRDLQSFPSI*PRRSFR Trigger: CCTGAACGAGCGCCTGGGCCAGATCGAGGGGAAGCT...CTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR GCA 90 bp | TTTGTACCCCCATTTCAAGGTATCTGGGTAGATTGTGAGGCAAGACAGCCTTGGGTGGGCGAGCCGCGCTaGAGCTTCCCCTCGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVPPFQGIWVDCEARQPWVGEPR*SFPSIW Trigger: CCAGATCGAGGGGAAGCTGCAGCGCGGCTCGCCCAC...CCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | GCTATGAGTATAGTGTTTGCAGAGCCAACCATGGTCACAGAGTACATGGGTCACAAGCGGCTGTGGTCGTaGCGGGTGCCGTGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AMSIVFAEPTMVTEYMGHKRLWS*RVPCTV Trigger: CACGGTGCACGGCACCCGCCACGACCACAGCCGCTT...GTGACCCATGTACTCTGTGACCATGGTTGGCTCTGCAAACACTATACTCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCCGGTGGCAGGAAAACTGCATGTCAGGACGAATGAGAGATCTGCAGCGTGCACCGTGCCGTTaGGGAAGATCTCAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHFRWQENCMSGRMRDLQRAPCR*GRSQGG Trigger: TCCACCTTGAGATCTTCCCCAACGGCACGGTGCACG...CTGCAGATCTCTCATTCGTCCTGACATGCAGTTTTCCTGCCACCGGAAGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAGGGTTGGAGCCCCTAGGATTTTCCAAATAACACTTTCCCAGAGCTCTGGGTGCCGTGCACCGTaGCGTTGGGGAAGATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSRVGAPRIFQITLSQSSGCRAP*RWGRSQ Trigger: TTGAGATCTTCCCCAACGGCACGGTGCACGGCACCC...AGAGCTCTGGGAAAGTGTTATTTGGAAAATCCTAGGGGCTCCAACCCTGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR GCA 90 bp | TCCCAGAGCTCTTTAGGTAGCATCTGTGGCAGATTCCTTGGTCTTTCATTTGTATGTGGTCGTGGCGGGTaGCGTGCACCGTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSLGSICGRFLGLSFVCGRGG*RAPCRW Trigger: CCAACGGCACGGTGCACGGCACCCGCCACGACCACA...TACAAATGAAAGACCAAGGAATCTGCCACAGATGCTACCTAAAGAGCTCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCCCCATTTCAAGGTATCTGGGTAGATTGTGAGGCAAGACAGCCTTGGGTATCCCTCCCGGGGTaGGCCGTCTTTATTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVPPFQGIWVDCEARQPWVSLPG*AVFIQG Trigger: GCCCTGAATAAAGACGGCTCACCCCGGGAGGGATAC...CCAAGGCTGTCTTGCCTCACAATCTACCCAGATACCTTGAAATGGGGGTACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR GCA 90 bp | GAAGGATTGAAAAGCTATGAGTATAGTGTTTGCAGAGCCAACCATGGTCACAGAGAGGAGGAGAAGCCGTaGAGGTCCCAGTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLKSYEYSVCRANHGHREEEKP*RSQSKE Trigger: CTCCTTGGACTGGGACCTGCACGGCTTCTCCTCCTC...TCTGTGACCATGGTTGGCTCTGCAAACACTATACTCATAGCTTTTCAATCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CCA 90 bp | CACTTTGAACAAGGGGACAGCTGGGTCACATTGAACAGTGAGTGCTTCTCTGTTAGTGTTTGTACAAGGTaGAGGCATAGGTGTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HFEQGDSWVTLNSECFSVSVCTR*RHRCCT Trigger: GGTACAACACCTATGCCTCCACCTTGTACAAACACT...AACAGAGAAGCACTCACTGTTCAATGTGACCCAGCTGTCCCCTTGTTCAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR TCA 90 bp | AGCTCTTTAGGTAGCATCTGTGGCAGATTCCTTGGTCTTTCATTTGTACCCCCAAAACACATTCACGTGTaGGTTTCTTCGATCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGSICGRFLGLSFVPPKHIHV*VSSIHR Trigger: TCTATGGATCGAAGAAACTCACACGTGAATGTGTTT...TGGGGGTACAAATGAAAGACCAAGGAATCTGCCACAGATGCTACCTAAAGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS GCA 90 bp | CGCAGGATCCCCTTCAGGTGGGCGAAGTCTGTGGGCGAGCCGCGCTaGAGCTTCCCCTCGATCTGGCCCAGGCGCTCGTTCAGGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RRIPFRWAKSVGEPR*SFPSIWPRRSFRKP Trigger: GGGTTTCCTGAACGAGCGCCTGGGCCAGATCGAGGGGAAGCTGCAGCGCGGCTCGCCCACAGACTTCGCCCACCTGAAGGGGATCCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS CCA 90 bp | TGGGCGAAGTCTGTGGGCGAGCCGCGCTGCAGCTTCCCCTCGATCTaGCCCAGGCGCTCGTTCAGGAAACCCGGGGAGTCAGCTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WAKSVGEPRCSFPSI*PRRSFRKPGESAKG Trigger: GCCCTTAGCTGACTCCCCGGGTTTCCTGAACGAGCGCCTGGGCCAGATCGAGGGGAAGCTGCAGCGCGGCTCGCCCACAGACTTCGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTTAGGTAGCATCTGTGGCAGATTCCTTGGTCTTTCATTTGTACCCCCACCGTGCACCGTGCCGTaGGGGAAGATCTCAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLGSICGRFLGLSFVPPPCTVP*GKISRW Trigger: CCACCTTGAGATCTTCCCCAACGGCACGGTGCACGG...TGGGGGTACAAATGAAAGACCAAGGAATCTGCCACAGATGCTACCTAAAGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS GCA 72 bp | CCCTTCAGGTGGGCGAAGTCTGTGGGCGAGCCGCGCTaGAGCTTCCCCTCGATCTGGCCCAGGCGCTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PFRWAKSVGEPR*SFPSIWPRRSF Trigger: GAACGAGCGCCTGGGCCAGATCGAGGGGAAGCTGCAGCGCGGCTCGCCCACAGACTTCGCCCACCTGAAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS GCA 72 bp | GCTAAGGGCACGTTCCCCAGAGAGGAGGAGAAGCCGTaGAGGTCCCAGTCCAAGGAGGCAAAGACGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AKGTFPREEEKP*RSQSKEAKTPP Trigger: CGGGGGCGTCTTTGCCTCCTTGGACTGGGACCTGCACGGCTTCTCCTCCTCTCTGGGGAACGTGCCCTTAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS CCA 72 bp | GCCAAGCTGATAAATTCCAGAATTCCGAAGCGGCTGTaGTCGTGGCGGGTGCCGTGCACCGTGCCGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKLINSRIPKRL*SWRVPCTVPLG Trigger: CCCCAACGGCACGGTGCACGGCACCCGCCACGACCACAGCCGCTTCGGAATTCTGGAATTTATCAGCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS GCA 72 bp | ATTCCAGAATTCCGAAGCGGCTGTGGTCGTGGCGGGTaGCGTGCACCGTGCCGTTGGGGAAGATCTCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IPEFRSGCGRGG*RAPCRWGRSQG Trigger: ACCTTGAGATCTTCCCCAACGGCACGGTGCACGGCACCCGCCACGACCACAGCCGCTTCGGAATTCTGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS TCA 72 bp | TTTCTTCAAACTGTTCCCGGAAAACACATTCACGTGTaGGTTTCTTCGATCCATAGAGCTCTCCTCGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLQTVPGKHIHV*VSSIHRALLAH Trigger: ATGAGCGAGGAGAGCTCTATGGATCGAAGAAACTCACACGTGAATGTGTTTTCCGGGAACAGTTTGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||
| CDS CCA 72 bp | AATACTGTCTCTCCGAGTCCGAGTGTTTGTACAAGGTaGAGGCATAGGTGTTGTACCAGTTTTCTTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: NTVSPSPSVCTR*RHRCCTSFLQT Trigger: AGTTTGAAGAAAACTGGTACAACACCTATGCCTCCACCTTGTACAAACACTCGGACTCGGAGAGACAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033581.4 |
||