RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031073

Ensembl transcript IDs: ENSMUST00000033389.7, ENSMUST00000207229.2

Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGAGCTGGGGACACAACTGGATGGCTCATAAGCTACCTGCTCTaGGGTTGGAGAGCCCAGGTGAACTCTGGGAAAGGTCAGAGGAGA +
Preference number: 1 (lower is better)
Translates to: PGAGDTTGWLISYLL*GWRAQVNSGKGQRR
Trigger: TCTCCTCTGACCTTTCCCAGAGTTCACCTGGGCTCTCCAACCCCAGAGCAGGTAGCTTATGAGCCATCCAGTTGTGTCCCCAGCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR CCA 90 bp GAACTCTGGGAAAGGTCAGAGGAGAAGATCCAGGTCCTGGAAATCTaGGGTCATGGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: ELWERSEEKIQVLEI*GHGTETSSWGLSGS
Trigger: GCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGACCCCAGATTTCCAGGACCTGGATCTTCTCCTCTGACCTTTCCCAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR CCA 90 bp GGAAAGGTCAGAGGAGAAGATCCAGGTCCTGGAAATCTGGGGTCATaGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGCTTGGCTAT +
Preference number: 1 (lower is better)
Translates to: GKVRGEDPGPGNLGS*DRDKLLGPKWQLGY
Trigger: ATAGCCAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGACCCCAGATTTCCAGGACCTGGATCTTCTCCTCTGACCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR TCA 90 bp TCCAGGTTGACACAGGCAGCAGACACGTTGATTCACAATGTTTGGTaGCCAGAACTGAGAGCCAGGAGCTGGGGACACAACTGGATGGCT +
Preference number: 1 (lower is better)
Translates to: SRLTQAADTLIHNVW*PELRARSWGHNWMA
Trigger: AGCCATCCAGTTGTGTCCCCAGCTCCTGGCTCTCAGTTCTGGTCACCAAACATTGTGAATCAACGTGTCTGCTGCCTGTGTCAACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR GCA 90 bp CACACACACAATAAATTACTTATAAATATCATGCTGCCACGTAAGTaGCGGGGAAAGGACTCCACAGTTCCCCAGCTGCCACTGGAGAAT +
Preference number: 1 (lower is better)
Translates to: HTHNKLLINIMLPRK*RGKDSTVPQLPLEN
Trigger: ATTCTCCAGTGGCAGCTGGGGAACTGTGGAGTCCTTTCCCCGGCACTTACGTGGCAGCATGATATTTATAAGTAATTTATTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CCA 90 bp TCATGGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGCTTGGCTATGCACTCTCAGTGGGGCTCCGATaGCAGCCAGGCAGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: SWDRDKLLGPKWQLGYALSVGLR*QPGRLS
Trigger: TGACAACCTGCCTGGCTGCCATCGGAGCCCCACTGA...GAGTGCATAGCCAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CCA 90 bp CACAACTGGATGGCTCATAAGCTACCTGCTCTGGGGTTGGAGAGCCCAGGTGAACTCCTGGGGCCTAAGTaGCAGCTTGGCTATGCACTC +
Preference number: 2 (lower is better)
Translates to: HNWMAHKLPALGLESPGELLGPK*QLGYAL
Trigger: GAGTGCATAGCCAAGCTGCCACTTAGGCCCCAGGAG...TTCACCTGGGCTCTCCAACCCCAGAGCAGGTAGCTTATGAGCCATCCAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CCA 90 bp AGGACTCCACAGTTCCCCAGCTGCCACTGGAGAATTTGGGGCTTCCTAATCTTGACAGAGACAAGCTCCTaGGGCCTAAGTGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: RTPQFPSCHWRIWGFLILTETSS*GLSGSL
Trigger: CAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGT...CAAGATTAGGAAGCCCCAAATTCTCCAGTGGCAGCTGGGGAACTGTGGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CCA 90 bp AGGACTCCACAGTTCCCCAGCTGCCACTGGAGAATTTGGGGCTTCCTAATCTTGAGCCCAGGTGAACTCTaGGAAAGGTCAGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RTPQFPSCHWRIWGFLILSPGEL*ERSEEK
Trigger: CTTCTCCTCTGACCTTTCCCAGAGTTCACCTGGGCT...CAAGATTAGGAAGCCCCAAATTCTCCAGTGGCAGCTGGGGAACTGTGGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR TCA 90 bp AGGACTCCACAGTTCCCCAGCTGCCACTGGAGAATTTGGGGCTTCCTAATCTTGAGGCAGCAGACACGTTaGTTCACAATGTTTGGTGAC +
Preference number: 2 (lower is better)
Translates to: RTPQFPSCHWRIWGFLILRQQTR*FTMFGD
Trigger: GTCACCAAACATTGTGAATCAACGTGTCTGCTGCCT...CAAGATTAGGAAGCCCCAAATTCTCCAGTGGCAGCTGGGGAACTGTGGAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CCA 90 bp AATCCTAAGACCATCCTTCAAGGCTCCCAAAGTTTTCTAGGCTGTCCTTTGTTCAGCCTCCAAAGTCAGTaGGGCTCCGATGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: NPKTILQGSQSFLGCPLFSLQSQ*GSDGSQ
Trigger: CTGGCTGCCATCGGAGCCCCACTGACTTTGGAGGCT...GAACAAAGGACAGCCTAGAAAACTTTGGGAGCCTTGAAGGATGGTCTTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR TCA 90 bp TGGGGCTTCCTAATCTTGTTTGTAAATGAGGGGTCCAGGTTGACACAGGCAGCAACAACAGGGTCCATGTaGGACTTAGAATATGTACAG +
Preference number: 2 (lower is better)
Translates to: WGFLILFVNEGSRLTQAATTGSM*DLEYVQ
Trigger: CTGTACATATTCTAAGTCTCACATGGACCCTGTTGT...TGCTGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR CCA 72 bp GGGGACACAACTGGATGGCTCATAAGCTACCTGCTCTaGGGTTGGAGAGCCCAGGTGAACTCTGGGAAAGGT +
Preference number: 3 (lower is better)
Translates to: GDTTGWLISYLL*GWRAQVNSGKG
Trigger: ACCTTTCCCAGAGTTCACCTGGGCTCTCCAACCCCAGAGCAGGTAGCTTATGAGCCATCCAGTTGTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR-3UTR CAA 90 bp TGGGGCTTCCTAATCTTGTTTGTAAATGAGGGGTCCAGGTTGACACAGGCAGCACTACCTGCTCTGGGGTaGGAGAGCCCAGGTGAACTC +
Preference number: 3 (lower is better)
Translates to: WGFLILFVNEGSRLTQAALPALG*ESPGEL
Trigger: GAGTTCACCTGGGCTCTCCAACCCCAGAGCAGGTAG...TGCTGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR TCA 72 bp ACACAGGCAGCAGACACGTTGATTCACAATGTTTGGTaGCCAGAACTGAGAGCCAGGAGCTGGGGACACAAC +
Preference number: 3 (lower is better)
Translates to: TQAADTLIHNVW*PELRARSWGHN
Trigger: GTTGTGTCCCCAGCTCCTGGCTCTCAGTTCTGGTCACCAAACATTGTGAATCAACGTGTCTGCTGCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR TCA 72 bp CTGGAGAATTTGGGGCTTCCTAATCTTGTTTGTAAATaGGGGGTCCAGGTTGACACAGGCAGCAGACACGTT +
Preference number: 3 (lower is better)
Translates to: LENLGLPNLVCK*GVQVDTGSRHV
Trigger: AACGTGTCTGCTGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCAAATTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp TGGGGTCATGGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGCTTGGCTATGTTCGGAGGAAGCAGTTaGAGACATAGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: WGHGTETSSWGLSGSLAMFGGSS*RHRDQR
Trigger: CCGCTGGTCCCTATGTCTCCAACTGCTTCCTCCGAA...CATAGCCAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR TCA 90 bp GGTCATGGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGCTTGGCTATGCACAGTCCATTTCCTCCCTaGAGGTACAGTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GHGTETSSWGLSGSLAMHSPFPP*RYSLPP
Trigger: CGGAGGAAGACTGTACCTTCAGGGAGGAAATGGACT...GTGCATAGCCAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp TGGGGTCATGGGACAGAGACAAGCTCCTGGGGCCTAAGTGGCAGCTTGGCTATGAAGTTTGAGGGTTTCTaGTCCTGGAGCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WGHGTETSSWGLSGSLAMKFEGF*SWSCSL
Trigger: CAGAGAACAGCTCCAGGACCAGAAACCCTCAAACTT...CATAGCCAAGCTGCCACTTAGGCCCCAGGAGCTTGTCTCTGTCCCATGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR GCA 90 bp ATACCTTCTGGCTTCCTCGCTAAAACCATCCAAGTCACAGATTTGGCTCAAAACTGCCGTCCGCGCTCATaGAGAGGTACCGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IPSGFLAKTIQVTDLAQNCRPRS*RGTARC
Trigger: GCAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCA...GTTTTGAGCCAAATCTGTGACTTGGATGGTTTTAGCGAGGAAGCCAGAAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp CACAACTGGATGGCTCATAAGCTACCTGCTCTGGGGTTGGAGAGCCCAGGTGAAGGACTCTTCACTAGGTaGTCTACATCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: HNWMAHKLPALGLESPGEGLFTR*STSSTI
Trigger: GATGGTGGAGGATGTAGACCACCTAGTGAAGAGTCC...TTCACCTGGGCTCTCCAACCCCAGAGCAGGTAGCTTATGAGCCATCCAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR TCA 90 bp AATCCTAAGACCATCCTTCAAGGCTCCCAAAGTTTTCTAGGCTGTCCTTTGTTCACAGACTGGGATTGCTaGGCCAGGGGACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: NPKTILQGSQSFLGCPLFTDWDC*ARGRPD
Trigger: GTCTGGGCGTCCCCTGGCTCAGCAATCCCAGTCTGT...GAACAAAGGACAGCCTAGAAAACTTTGGGAGCCTTGAAGGATGGTCTTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp CACAACTGGATGGCTCATAAGCTACCTGCTCTGGGGTTGGAGAGCCCAGGTGAATCTCTGGGCTTGGCCTaGATGAAGATGATATGGAGA +
Preference number: 4 (lower is better)
Translates to: HNWMAHKLPALGLESPGESLGLA*MKMIWR
Trigger: TCTCCATATCATCTTCATCCAGGCCAAGCCCAGAGA...TTCACCTGGGCTCTCCAACCCCAGAGCAGGTAGCTTATGAGCCATCCAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp ATTTTATCATTTGACTTCATACCTTCTGGCTTCCTCGCTAAAACCATCCAAGTCCAGCCAGCCACAGAGTaGCCAGGACCAGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ILSFDFIPSGFLAKTIQVQPATE*PGPGLG
Trigger: CCCGAGCCCTGGTCCTGGCCACTCTGTGGCTGGCTG...GACTTGGATGGTTTTAGCGAGGAAGCCAGAAGGTATGAAGTCAAATGATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
3UTR CAA 72 bp CCCAGCTGCCACTGGAGAATTTGGGGCTTCCTAATCTaGTTTGTAAATGAGGGGTCCAGGTTGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: PSCHWRIWGFLI*FVNEGSRLTQA
Trigger: TGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCAAATTCTCCAGTGGCAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp TGGGGCTTCCTAATCTTGTTTGTAAATGAGGGGTCCAGGTTGACACAGGCAGCAGGAGATGGTGCTTCATaGATCTGTACTGGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: WGFLILFVNEGSRLTQAAGDGAS*ICTGCS
Trigger: GCTACAACCAGTACAGATCCATGAAGCACCATCTCC...TGCTGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp TGGGGCTTCCTAATCTTGTTTGTAAATGAGGGGTCCAGGTTGACACAGGCAGCATGGATGAAGATGATATaGAGATGGTGCTTCATGGAT +
Preference number: 4 (lower is better)
Translates to: WGFLILFVNEGSRLTQAAWMKMI*RWCFMD
Trigger: ATCCATGAAGCACCATCTCCATATCATCTTCATCCA...TGCTGCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS-3UTR CCA 90 bp AGAATTTGGGGCTTCCTAATCTTGTTTGTAAATGAGGGGTCCAGGTTGACACAGAAATTTCGTTCGTTTTaGTCCTCCTCGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: RIWGFLILFVNEGSRLTQKFRSF*SSSQST
Trigger: TGTGGACTGCGAGGAGGACCAAAACGAACGAAATTT...CTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS TCA 90 bp GCGGGTAATCTTGCCCCAGCCGTAGAGAAAGAGTGGATCTTCATCTaGCACAGACTGGGATTGCTGAGCCAGGGGACGCCCAGACACAGC +
Preference number: 5 (lower is better)
Translates to: AGNLAPAVEKEWIFI*HRLGLLSQGTPRHS
Trigger: GCTGTGTCTGGGCGTCCCCTGGCTCAGCAATCCCAGTCTGTGTCAGATGAAGATCCACTCTTTCTCTACGGCTGGGGCAAGATTACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS TCA 90 bp GGAAGCTGGGACTCTTCACTAGGTGGTCTACATCCTCCACCATCCTaGACGGATCCATGCTGTCACTCTCCAGGGGCAGGGAGAACATTT +
Preference number: 5 (lower is better)
Translates to: GSWDSSLGGLHPPPS*TDPCCHSPGAGRTF
Trigger: AAATGTTCTCCCTGCCCCTGGAGAGTGACAGCATGGATCCGTTCAGGATGGTGGAGGATGTAGACCACCTAGTGAAGAGTCCCAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS CCA 90 bp AAGTTTGAGGGTTTCTGGTCCTGGAGCTGTTCTCTGGGCTTGGCCTaGATGAAGATGATATGGAGATGGTGCTTCATGGATCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: KFEGFWSWSCSLGLA*MKMIWRWCFMDLYW
Trigger: CCAGTACAGATCCATGAAGCACCATCTCCATATCATCTTCATCCAGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAAACCCTCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS CCA 72 bp GAGCCAGGGGACGCCCAGACACAGCCAGCCACAGAGTaGCCAGGACCAGGGCTCGGGCCACCGCACGCCCGT +
Preference number: 6 (lower is better)
Translates to: EPGDAQTQPATE*PGPGLGPPHAR
Trigger: ACGGGCGTGCGGTGGCCCGAGCCCTGGTCCTGGCCACTCTGTGGCTGGCTGTGTCTGGGCGTCCCCTGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS GCA 72 bp GGAGCTGTTCTCTGGGCTTGGCCAGCCCGTATATCTTaGCGTCCGCGCTCATGCAGAGGTACCGCACGCTGC +
Preference number: 6 (lower is better)
Translates to: GAVLWAWPARIS*RPRSCRGTARC
Trigger: GCAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS CAA 90 bp TTCTGGTCCTGGAGCTGTTCTCTGGGCTTGGCCAGCCCGTATATCTaGCCGTCCGCGCTCATGCAGAGGTACCGCACGCTGCTGACGTCC +
Preference number: 6 (lower is better)
Translates to: FWSWSCSLGLASPYI*PSALMQRYRTLLTS
Trigger: GGACGTCAGCAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS CAA 72 bp TGGAGCTGTTCTCTGGGCTTGGCCAGCCCGTATATCTaGCCGTCCGCGCTCATGCAGAGGTACCGCACGCTG +
Preference number: 6 (lower is better)
Translates to: WSCSLGLASPYI*PSALMQRYRTL
Trigger: CAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS CAA 72 bp GCGCTCATGCAGAGGTACCGCACGCTGCTGACGTCCTaGATGGCAATCGTCTTCAGAGCGACCGCGCGGAAT +
Preference number: 6 (lower is better)
Translates to: ALMQRYRTLLTS*MAIVFRATARN
Trigger: ATTCCGCGCGGTCGCTCTGAAGACGATTGCCATCAAGGACGTCAGCAGCGTGCGGTACCTCTGCATGAGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS GCA 72 bp AGTCTTCCTCCGAGTAGCGAATCAGCCCGTATATCTTaGCGTCCGCGCTCATGCAGAGGTACCGCACGCTGC +
Preference number: 6 (lower is better)
Translates to: SLPPSSESARIS*RPRSCRGTARC
Trigger: GCAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCAAGATATACGGGCTGATTCGCTACTCGGAGGAAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS CCA 72 bp CCACAGAGCCGTCGCTCCGGATTCGGAGGAAGCAGTTaGAGACATAGGGACCAGCGGAGTACAGGTACTGCA +
Preference number: 6 (lower is better)
Translates to: PQSRRSGFGGSS*RHRDQRSTGTA
Trigger: TGCAGTACCTGTACTCCGCTGGTCCCTATGTCTCCAACTGCTTCCTCCGAATCCGGAGCGACGGCTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS CCA 72 bp GCGACCGCGCGGAATTCCAACAAATTTCGTTCGTTTTaGTCCTCCTCGCAGTCCACAGAGCCGTCGCTCCGG +
Preference number: 6 (lower is better)
Translates to: ATARNSNKFRSF*SSSQSTEPSLR
Trigger: CCGGAGCGACGGCTCTGTGGACTGCGAGGAGGACCAAAACGAACGAAATTTGTTGGAATTCCGCGCGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS CCA 72 bp TTGAGGGTTTCTGGTCCTGGAGCTGTTCTCTGGGCTTaGCCAGCCCGTATATCTTGCCGTCCGCGCTCATGC +
Preference number: 6 (lower is better)
Translates to: LRVSGPGAVLWA*PARISCRPRSC
Trigger: GCATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAAACCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS CAA 90 bp TTGCCGTCCGCGCTCATGCAGAGGTACCGCACGCTGCTGACGTCCTaGATGGCAATCGTCTTCAGAGCGACCGCGCGGAATTCCAACAAA +
Preference number: 6 (lower is better)
Translates to: LPSALMQRYRTLLTS*MAIVFRATARNSNK
Trigger: TTTGTTGGAATTCCGCGCGGTCGCTCTGAAGACGATTGCCATCAAGGACGTCAGCAGCGTGCGGTACCTCTGCATGAGCGCGGACGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS TCA 72 bp CTTGCCCCAGCCGTAGAGAAAGAGTGGATCTTCATCTaGCACAGACTGGGATTGCTGAGCCAGGGGACGCCC +
Preference number: 6 (lower is better)
Translates to: LAPAVEKEWIFI*HRLGLLSQGTP
Trigger: GGGCGTCCCCTGGCTCAGCAATCCCAGTCTGTGTCAGATGAAGATCCACTCTTTCTCTACGGCTGGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS CAA 72 bp TTTGAGGGTTTCTGGTCCTGGAGCTGTTCTCTGGGCTaGGCCAGCCCGTATATCTTGCCGTCCGCGCTCATG +
Preference number: 6 (lower is better)
Translates to: FEGFWSWSCSLG*ASPYILPSALM
Trigger: CATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAAACCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS CAA 90 bp GGGATAAAGTTTGAGGGTTTCTGGTCCTGGAGCTGTTCTCTGGGCTaGGCCAGCCCGTATATCTTGCCGTCCGCGCTCATGCAGAGGTAC +
Preference number: 6 (lower is better)
Translates to: GIKFEGFWSWSCSLG*ASPYILPSALMQRY
Trigger: GTACCTCTGCATGAGCGCGGACGGCAAGATATACGGGCTGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAAACCCTCAAACTTTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207229.2
CDS TCA 72 bp GACTCTTCACTAGGTGGTCTACATCCTCCACCATCCTaGACGGATCCATGCTGTCACTCTCCAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: DSSLGGLHPPPS*TDPCCHSPGAG
Trigger: CCCTGCCCCTGGAGAGTGACAGCATGGATCCGTTCAGGATGGTGGAGGATGTAGACCACCTAGTGAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS TCA 72 bp GACCTCAGCTGGTCCCCGGTTTCAAAGAAGGAGCGGTaGAACACGGGGATAAAGTTTGAGGGTTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: DLSWSPVSKKER*NTGIKFEGFWS
Trigger: GGACCAGAAACCCTCAAACTTTATCCCCGTGTTTCACCGCTCCTTCTTTGAAACCGGGGACCAGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033389.7
ENSMUST00000207229.2
CDS CCA 72 bp GGTTTCTGGTCCTGGAGCTGTTCTCTGGGCTTGGCCTaGATGAAGATGATATGGAGATGGTGCTTCATGGAT +
Preference number: 6 (lower is better)
Translates to: GFWSWSCSLGLA*MKMIWRWCFMD
Trigger: ATCCATGAAGCACCATCTCCATATCATCTTCATCCAGGCCAAGCCCAGAGAACAGCTCCAGGACCAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7
CDS TCA 72 bp TGTACTGGTTGTAGCCTAAACAGTCCATTTCCTCCCTaGAGGTACAGTCTTCCTCCGAGTAGCGAATCAGCC +
Preference number: 6 (lower is better)
Translates to: CTGCSLNSPFPP*RYSLPPSSESA
Trigger: GGCTGATTCGCTACTCGGAGGAAGACTGTACCTTCAGGGAGGAAATGGACTGTTTAGGCTACAACCAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033389.7