Pregenerated sensors for FGF13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031137Ensembl transcript IDs: ENSMUST00000033473.12, ENSMUST00000119306.2, ENSMUST00000119833.8, ENSMUST00000124402.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAGAGGGTGCGAGAGAGGAAAACCCATAAGAACACGGTTACCTTaGACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: RRGCERGKPIRTRLP*TSDANSDSTLPLVN Trigger: ATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACCGTGTTCTTATGGGTTTTCCTCTCTCGCACCCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 90 bp | ACACTTGAGGATAATCTTGTTTCAACTTATCTTACTGACTGGGATTaGCGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TLEDNLVSTYLTDWD*RYNSISTHKVQHKN Trigger: GTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGTCAGTAAGATAAGTTGAAACAAGATTATCCTCAAGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 90 bp | TTCCACAGTTCCTGTCTTTACACAAGAAGCCACAATAGATTAACATaGTACACGAATGGAATTAAGAGAAATCTACACTTGAGGATAATC | + |
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Preference number: 1 (lower is better) Translates to: FHSSCLYTRSHNRLT*YTNGIKRNLHLRII Trigger: GATTATCCTCAAGTGTAGATTTCTCTTAATTCCATTCGTGTATCATGTTAATCTATTGTGGCTTCTTGTGTAAAGACAGGAACTGTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACATCCCCAAAGTACAGGTaGGATCATGAGAAAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTSPKYR*DHEKIW Trigger: CCAAATTTTCTCATGATCTCACCTGTACTTTGGGGA...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACACTTACTGACTGGGATTaGCGATACAACTCAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTLTDWD*RYNSIS Trigger: AGAAATTGAGTTGTATCGTCAATCCCAGTCAGTAAG...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTGTACAGGTGAGATCATaGGAAAATTTGGCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTVQVRS*ENLAVL Trigger: AAGGACTGCCAAATTTTCTCATGATCTCACCTGTAC...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCTCCCCAAAGTACAGGTaGGATCATGAGAAAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: LVHVQVRHFLFEQHERQCSPKYR*DHEKIW Trigger: CCAAATTTTCTCATGATCTCACCTGTACTTTGGGGA...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCAGAACACGGTTACCTTaGACCTCAGATGCCAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRYNICCLGGTILNIALFRTRLP*TSDANS Trigger: TGAATTGGCATCTGAGGTTCAAGGTAACCGTGTTCT...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACGTACAGGTGAGATCATaGGAAAATTTGGCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HFSSSRYNICCLGGTILNVQVRS*ENLAVL Trigger: AAGGACTGCCAAATTTTCTCATGATCTCACCTGTAC...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACTACAGCACAAGAACTTaGCCAGAATGCTACAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HFSSSRYNICCLGGTILNYSTRT*PECYSS Trigger: AGAACTGTAGCATTCTGGTCAAGTTCTTGTGCTGTA...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACCTTACTGACTGGGATTaGCGATACAACTCAATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HFSSSRYNICCLGGTILNLTDWD*RYNSIS Trigger: AGAAATTGAGTTGTATCGTCAATCCCAGTCAGTAAG...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTATGGGGCTTTAATATaGGTGATAACAAGGTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTYGALI*VITRYN Trigger: GTTATACCTTGTTATCACCCATATTAAAGCCCCATA...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CCA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTATTCATTGATAATGCTTaGCACTCTTTTGCACAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YNSISTHKVQHKNLTRMLFIDNA*HSFAQA Trigger: AGCTTGTGCAAAAGAGTGCCAAGCATTATCAATGAA...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTTGTACATGTACAGGTaGGACACTTCTTATTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SRYNICCLGGTILNIALFLYMYR*DTSYLN Trigger: GTTCAAATAAGAAGTGTCTCACCTGTACATGTACAA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACTTGTACATGTACAGGTaGGACACTTCTTATTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HFSSSRYNICCLGGTILNLYMYR*DTSYLN Trigger: GTTCAAATAAGAAGTGTCTCACCTGTACATGTACAA...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR GCA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTAATTCAGATTCAACCCTaGCTTTGGTTAATATGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YNSISTHKVQHKNLTRMLIQIQP*LWLIWI Trigger: AATCCATATTAACCAAAGGCAGGGTTGAATCTGAAT...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCATTCAGATTCAACCCTaGCTTTGGTTAATATGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LVHVQVRHFLFEQHERQCIQIQP*LWLIWI Trigger: AATCCATATTAACCAAAGGCAGGGTTGAATCTGAAT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CCA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTATATGGGGCTTTAATATaGGTGATAACAAGGTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: YNSISTHKVQHKNLTRMLYGALI*VITRYN Trigger: GTTATACCTTGTTATCACCCATATTAAAGCCCCATA...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCTATGGGGCTTTAATATaGGTGATAACAAGGTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: LVHVQVRHFLFEQHERQCYGALI*VITRYN Trigger: GTTATACCTTGTTATCACCCATATTAAAGCCCCATA...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTTCATTGATAATGCTTaGCACTCTTTTGCACAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRYNICCLGGTILNIALFFIDNA*HSFAQA Trigger: AGCTTGTGCAAAAGAGTGCCAAGCATTATCAATGAA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 72 bp | TGCGAGAGAGGAAAACCCATAAGAACACGGTTACCTTaGACCTCAGATGCCAATTCAGATTCAACCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: CERGKPIRTRLP*TSDANSDSTLP Trigger: AGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACCGTGTTCTTATGGGTTTTCCTCTCTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CAA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACAGTACAGCACAAGAACTaGACCAGAATGCTACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTVQHKN*TRMLQF Trigger: GAACTGTAGCATTCTGGTCAAGTTCTTGTGCTGTAC...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 72 bp | AGGACTTGTACATGTACAGGTGAGACACTTCTTATTTaGACAACACGAAAGACAATGCCACTGTTCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: RTCTCTGETLLI*TTRKTMPLFHS Trigger: ACTGTGGAACAGTGGCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAGATAAGTTTGAACTTTaGGATGAAGGACTGCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIDKFEL*DEGLLE Trigger: TTCTAGCAGTCCTTCATCCAAAAGTTCAAACTTATC...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CAA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTATCCAGGTTTAGTTCATaGATAATGCTTGGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: YNSISTHKVQHKNLTRMLSRFSS*IMLGTL Trigger: AAGAGTGCCAAGCATTATCAATGAACTAAACCTGGA...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR GCA 72 bp | CATGCAACTCTATGCCAAGATTCCAACTTTCTTCCATaGAACAGATATGAAGATCTAAATGGAAACCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: HATLCQDSNFLP*NRYEDLNGNLA Trigger: AGCTAGGTTTCCATTTAGATCTTCATATCTGTTGCATGGAAGAAAGTTGGAATCTTGGCATAGAGTTGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CAA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTAGATAAGTTTGAACTTTaGGATGAAGGACTGCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: YNSISTHKVQHKNLTRMLDKFEL*DEGLLE Trigger: TTCTAGCAGTCCTTCATCCAAAAGTTCAAACTTATC...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTCCAGGTTTAGTTCATaGATAATGCTTGGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: SRYNICCLGGTILNIALFSRFSS*IMLGTL Trigger: AAGAGTGCCAAGCATTATCAATGAACTAAACCTGGA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 72 bp | GATAATCTTGTTTCAACTTATCTTACTGACTGGGATTaGCGATACAACTCAATTTCTACGCACAAAGTACAG | + |
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Preference number: 3 (lower is better) Translates to: DNLVSTYLTDWD*RYNSISTHKVQ Trigger: CTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGTCAGTAAGATAAGTTGAAACAAGATTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR GCA 72 bp | GAAGCCAAGAAAACAGCACAGTTCACAGAATTTGTTTaGCCCTACAAAACATTTAAGCAGTTAACTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: EAKKTAQFTEFV*PYKTFKQLTLF Trigger: AAACAAAGTTAACTGCTTAAATGTTTTGTAGGGGCAAACAAATTCTGTGAACTGTGCTGTTTTCTTGGCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR TCA 72 bp | TCCTGTCTTTACACAAGAAGCCACAATAGATTAACATaGTACACGAATGGAATTAAGAGAAATCTACACTTG | + |
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Preference number: 3 (lower is better) Translates to: SCLYTRSHNRLT*YTNGIKRNLHL Trigger: CAAGTGTAGATTTCTCTTAATTCCATTCGTGTATCATGTTAATCTATTGTGGCTTCTTGTGTAAAGACAGGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR CCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTAGACGCTTCTGCTCTTaGTCGGGGTCCCACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVRRFCS*SGSHFQ Trigger: CTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCT...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR TCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTATCGGGAGAACTCCGTaGGATCGTGCAGAGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVIGRTP*DRAEMA Trigger: AGCCATCTCTGCACGATCTCACGGAGTTCTCCCGAT...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| 3UTR CAA 72 bp | GTGCGAGAGAGGAAAACCCATAAGAACACGGTTACCTaGAACCTCAGATGCCAATTCAGATTCAACCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VRERKTHKNTVT*NLRCQFRFNPA Trigger: GGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACCGTGTTCTTATGGGTTTTCCTCTCTCGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR GCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCCGGGCTTGTCTCTTTTaGCGGATGAGCGAGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCRACLF*RMSELA Trigger: CGCCAGCTCGCTCATCCGGCAAAAGAGACAAGCCCG...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
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| CDS-3UTR CCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTTGTTTTTGTCGCAGCTaGTCTTGCCTTTGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVCFCRS*SCLCWG Trigger: GCCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACA...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
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| CDS-3UTR CCA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTAGACGCTTCTGCTCTTaGTCGGGGTCCCACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTRRFCS*SGSHFQ Trigger: CTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCT...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR GCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTAACTCCGTGAGATCGTaGAGAGATGGCTCCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVNSVRS*RDGSLY Trigger: GTACAAGGAGCCATCTCTGCACGATCTCACGGAGTT...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR CCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCAGACGCTTCTGCTCTTaGTCGGGGTCCCACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCRRFCS*SGSHFQ Trigger: CTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFLCWGC*HTCRHW Trigger: CCAATGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAG...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
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| CDS-3UTR GCA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACATGTCCTCGTCTTTGGTaGCATCAATGGTTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTCPRLW*HQWFHL Trigger: CAGATGGAACCATTGATGGCACCAAAGACGAGGACA...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR GCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTGGGCAGAAAATGTGCTaGAGGCTTGTTCTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVGQKMC*RLVLLH Trigger: GTGAAGAAGAACAAGCCTGCAGCACATTTTCTGCCC...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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| CDS-3UTR GCA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAAACTCCGTGAGATCGTaGAGAGATGGCTCCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GYLEPQMPIQIQPCLWLINSVRS*RDGSLY Trigger: GTACAAGGAGCCATCTCTGCACGATCTCACGGAGTT...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCCACACTTGCAGGCATTaGATTTCTCGCGCTCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFHTCRH*ISRARG Trigger: CCCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGTG...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACACTTTGGTGCCATCAATaGTTCCATCTGCCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTLWCHQ*FHLPAV Trigger: AACTGCAGGCAGATGGAACCATTGATGGCACCAAAG...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCATCGGGAGAACTCCGTaGGATCGTGCAGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFIGRTP*DRAEMA Trigger: AGCCATCTCTGCACGATCTCACGGAGTTCTCCCGAT...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTTCCCTCGCTGTTCATTaGCAAATACAGCTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVSLAVH*QIQLGL Trigger: CAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGA...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATACTTTGGTGCCATCAATaGTTCCATCTGCCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYLEPQMPIQIQPCLWLILWCHQ*FHLPAV Trigger: AACTGCAGGCAGATGGAACCATTGATGGCACCAAAG...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATACATGGCCACTTTCAGTaGTTTGGGCAGAAAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIHGHFQ*FGQKMC Trigger: GCACATTTTCTGCCCAAACCACTGAAAGTGGCCATG...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAATGGCTCCTTGTACATaGCCACTTTCAGTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIMAPCT*PLSVVW Trigger: CCAAACCACTGAAAGTGGCCATGTACAAGGAGCCAT...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTTACGTTGATTCGTTGTaGCTCATGGATTTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARRIQQHLKVRFCYRALVYVDSL*LMDLPP Trigger: TGGAGGCAAATCCATGAGCCACAACGAATCAACGTA...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCACTATACCCTTAAGCTaGGGCTCTGGTCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCTIPLS*GSGLLL Trigger: CAGAAGGAGACCAGAGCCTCAGCTTAAGGGTATAGT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR GCA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGTGGCTCATGGATTTaGCTCCATTCAGTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTCGSWI*LHSVHQ Trigger: CTGGTGTACTGAATGGAGGCAAATCCATGAGCCACA...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTCCACTTTCAGTGGTTTaGGCAGAAAATGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTPLSVV*AENVLQ Trigger: CTGCAGCACATTTTCTGCCCAAACCACTGAAAGTGG...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTATGTCCTCGTCTTTGGTaGCATCAATGGTTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNSISTHKVQHKNLTRMLCPRLW*HQWFHL Trigger: CAGATGGAACCATTGATGGCACCAAAGACGAGGACA...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCCATGGCCACTTTCAGTaGTTTGGGCAGAAAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCHGHFQ*FGQKMC Trigger: GCACATTTTCTGCCCAAACCACTGAAAGTGGCCATG...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCATCAATGGTTCCATCTaGCTGCAGTTGCAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCINGSI*LQLQVV Trigger: TACCACTTGCAACTGCAGGCAGATGGAACCATTGAT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTATCCCTCGCTGTTCATTaGCAAATACAGCTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YNSISTHKVQHKNLTRMLSLAVH*QIQLGL Trigger: CAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGA...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTGTGGCTCATGGATTTaGCTCCATTCAGTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFCGSWI*LHSVHQ Trigger: CTGGTGTACTGAATGGAGGCAAATCCATGAGCCACA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCCTTTGGTGCCATCAATaGTTCCATCTGCCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFLWCHQ*FHLPAV Trigger: AACTGCAGGCAGATGGAACCATTGATGGCACCAAAG...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCCCACTTTCAGTGGTTTaGGCAGAAAATGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFPLSVV*AENVLQ Trigger: CTGCAGCACATTTTCTGCCCAAACCACTGAAAGTGG...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACCCACTTTCAGTGGTTTaGGCAGAAAATGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFSSSRYNICCLGGTILNPLSVV*AENVLQ Trigger: CTGCAGCACATTTTCTGCCCAAACCACTGAAAGTGG...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCATGGCTCCTTGTACATaGCCACTTTCAGTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRYNICCLGGTILNIALFMAPCT*PLSVVW Trigger: CCAAACCACTGAAAGTGGCCATGTACAAGGAGCCAT...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTTGGAGCCAAAGAGTTTaGCCCGGGAAAAGACGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTIWSQRV*PGKRRL Trigger: TAAACGTCTTTTCCCGGGTCAAACTCTTTGGCTCCA...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR TCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCACTATACCCTTAAGCTaGGGCTCTGAATATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCTIPLS*GSEYDF Trigger: GAAGTCATATTCAGAGCCTCAGCTTAAGGGTATAGT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119306.2 |
||
| CDS-3UTR GCA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACTCCCTCGCTGTTCATTaGCAAATACAGCTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFSSSRYNICCLGGTILNSLAVH*QIQLGL Trigger: CAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGA...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTGGGCAGAAAATGTGCTaGAGGCTTGTTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTIGQKMC*RLVLLH Trigger: GTGAAGAAGAACAAGCCTGCAGCACATTTTCTGCCC...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTTGTGGCTCATGGATTTaGCTCCATTCAGTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTICGSWI*LHSVHQ Trigger: CTGGTGTACTGAATGGAGGCAAATCCATGAGCCACA...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTATGGCTCCTTGTACATaGCCACTTTCAGTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTIMAPCT*PLSVVW Trigger: CCAAACCACTGAAAGTGGCCATGTACAAGGAGCCAT...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCATTCGTTGTGGCTCATaGATTTGCCTCCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHVQVRHFLFEQHERQCIRCGS*ICLHSV Trigger: TACTGAATGGAGGCAAATCCATGAGCCACAACGAAT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| 3UTR CAA 72 bp | AGAAAATTTGGCAGTCCTTCTTCCAGGTTTAGTTCATaGATAATGCTTGGCACTCTTTTGCACAAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKFGSPSSRFSS*IMLGTLLHKLR Trigger: TCTGAGCTTGTGCAAAAGAGTGCCAAGCATTATCAATGAACTAAACCTGGAAGAAGGACTGCCAAATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTATCAATGGTTCCATCTaGCTGCAGTTGCAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTIINGSI*LQLQVV Trigger: TACCACTTGCAACTGCAGGCAGATGGAACCATTGAT...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTATTCGTTGTGGCTCATaGATTTGCCTCCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKHFSSSRYNICCLGGTIIRCGS*ICLHSV Trigger: TACTGAATGGAGGCAAATCCATGAGCCACAACGAAT...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS TCA 90 bp | TTAACTTGTTTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCATTGGATTTCTCGCGCTCGCGGGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTCFCRSWSCLCWGC*HTCRHWISRARGLV Trigger: GACAAGCCCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACAAGTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS TCA 90 bp | GAGGCTCTGGTCTCCTTCTGCGCCTCTTCTTGGAGCCAAAGAGTTTaGCCCGGGAAAAGACGTTTAACTTGTTTTTGTCGCAGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EALVSFCASSWSQRV*PGKRRLTCFCRSWS Trigger: AGACCAGCTGCGACAAAAACAAGTTAAACGTCTTTTCCCGGGTCAAACTCTTTGGCTCCAAGAAGAGGCGCAGAAGGAGACCAGAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAGCGGGCTTGTCTCTTTaGCCGGATGAGCGAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIAGLSL*PDERAG Trigger: GCCAGCTCGCTCATCCGGCAAAAGAGACAAGCCCGC...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTCAGCTGGTCTTGCCTTaGCTGGGGCTGCTGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVQLVLP*LGLLTH Trigger: GTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTG...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACACCACCCTCGGCCGGATaGCTGCTGACGGTAGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTPPSAG*LLTVDH Trigger: ATGATCTACCGTCAGCAGCAATCCGGCCGAGGGTGG...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTCTCGCGCTCGCGGGCTaGTCTCTTTTGCCGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTLALAG*SLLPDE Trigger: CTCATCCGGCAAAAGAGACAAGCCCGCGAGCGCGAG...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTACACACTTGCAGGCATaGGATTTCTCGCGCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVTHLQA*DFSRSR Trigger: CCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGTGT...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTTCCATCTGCCTGCAGTaGCAAGTGGTAGCCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVSICLQ*QVVALS Trigger: CGACAAGGCTACCACTTGCAACTGCAGGCAGATGGA...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS GCA 90 bp | AGGTGTGAAATGTTCCGAGGTGTACAAGTATCCCTCGCTGTTCATTaGCAAATACAGCTTGGTTTGAACTCCTTGAATAGCCACCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RCEMFRGVQVSLAVH*QIQLGLNSLNSHHP Trigger: CGGGTGGTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGATACTTGTACACCTCGGAACATTTCACACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTCTTCTGCGCCTCTTCTaGGAGCCAAAGAGTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVLLRLF*EPKSLT Trigger: GGTCAAACTCTTTGGCTCCAAGAAGAGGCGCAGAAG...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACTTGTCGCAGCTGGTCTaGCCTTTGCTGGGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFSSSRYNICCLGGTILNLSQLV*PLLGLL Trigger: CAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAA...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTCCATCTGCCTGCAGTaGCAAGTGGTAGCCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTSICLQ*QVVALS Trigger: CGACAAGGCTACCACTTGCAACTGCAGGCAGATGGA...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTCTTGGTTTGAACTCCTaGAATAGCCACCACCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVLGLNS*NSHHPK Trigger: CTTCGGGTGGTGGCTATTCAAGGAGTTCAAACCAAG...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAACAGCACCTGAAGGTAAGGTTCTGTTATAGAGCCCTCGTTGCCACTTTCAGTGGTTaGGGCAGAAAATGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARRIQQHLKVRFCYRALVATFSG*GRKCAA Trigger: TGCAGCACATTTTCTGCCCAAACCACTGAAAGTGGC...AACGAGGGCTCTATAACAGAACCTTACCTTCAGGTGCTGTTGAATTCTTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACATTGGAGCCAAAGAGTTaGACCCGGGAAAAGACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTLEPKS*TREKTF Trigger: AAACGTCTTTTCCCGGGTCAAACTCTTTGGCTCCAA...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATACTTGGTTTGAACTCCTaGAATAGCCACCACCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLILGLNS*NSHHPK Trigger: CTTCGGGTGGTGGCTATTCAAGGAGTTCAAACCAAG...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCCACCCTCGGCCGGATaGCTGCTGACGGTAGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKHFSSSRYNICCLGGTIPPSAG*LLTVDH Trigger: ATGATCTACCGTCAGCAGCAATCCGGCCGAGGGTGG...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAGCCACTTTCAGTGGTTaGGGCAGAAAATGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIATFSG*GRKCAA Trigger: TGCAGCACATTTTCTGCCCAAACCACTGAAAGTGGC...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTCCATCTGCCTGCAGTaGCAAGTGGTAGCCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRYNICCLGGTILNIALFSICLQ*QVVALS Trigger: CGACAAGGCTACCACTTGCAACTGCAGGCAGATGGA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTGTTCACAATGTTCACGTGCCAAATCCAATGACAGGAGGACTTGTACAATCCCTCGCTGTTCATaGCCAAATACAGCTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCSQCSRAKSNDRRTCTIPRCS*PNTAWF Trigger: AAACCAAGCTGTATTTGGCAATGAACAGCGAGGGAT...TGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAACATTGTGAACAAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTGGGCTGCTGACACACTaGCAGGCATTGGATTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LKHFSSSRYNICCLGGTIGLLTH*QALDFS Trigger: CGAGAAATCCAATGCCTGCAAGTGTGTCAGCAGCCC...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAAAATGTGCTGCAGGCTaGTTCTTCTTCACATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIKCAAG*FFFTWL Trigger: CAACCATGTGAAGAAGAACAAGCCTGCAGCACATTT...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATACAAATACAGCTTGGTTaGAACTCCTTGAATAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIQIQLG*NSLNSH Trigger: GTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTG...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATAATGATCTCTCCTTCTTaGTTCAGACCTAGATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIMISPS*FRPRYH Trigger: GTGGTATCTAGGTCTGAACAAAGAAGGAGAGATCAT...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACCTTGAACCTCAGATGCCAATTCAGATTCAACCCTGCCTTTGGTTAATATTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GYLEPQMPIQIQPCLWLIFFFTW*PFMISP Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...TATTAACCAAAGGCAGGGTTGAATCTGAATTGGCATCTGAGGTTCAAGGTAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCGCCACTTTCAGTGGTTaGGGCAGAAAATGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRYNICCLGGTILNIALFATFSG*GRKCAA Trigger: TGCAGCACATTTTCTGCCCAAACCACTGAAAGTGGC...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCACGTTTAACTTGTTTTaGTCGCAGCTGGTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVHVQVRHFLFEQHERQCTFNLF*SQLVLP Trigger: AGGCAAGACCAGCTGCGACAAAAACAAGTTAAACGT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS-3UTR CAA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTAATCCCTCGCTGTTCATaGCCAAATACAGCTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YNSISTHKVQHKNLTRMLIPRCS*PNTAWF Trigger: AAACCAAGCTGTATTTGGCAATGAACAGCGAGGGAT...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTATGATCTCTCCTTCTTaGTTCAGACCTAGATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTMISPS*FRPRYH Trigger: GTGGTATCTAGGTCTGAACAAAGAAGGAGAGATCAT...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATTGACGATACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGIDDTTQFLRTKYSTRTFFFTW*PFMISP Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...AGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTATCGTCAATCCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTAAAATGTGCTGCAGGCTaGTTCTTCTTCACATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YNSISTHKVQHKNLTRMLKCAAG*FFFTWL Trigger: CAACCATGTGAAGAAGAACAAGCCTGCAGCACATTT...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCATCCCTCGCTGTTCATaGCCAAATACAGCTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRYNICCLGGTILNIALFIPRCS*PNTAWF Trigger: AAACCAAGCTGTATTTGGCAATGAACAGCGAGGGAT...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | TACAACTCAATTTCTACGCACAAAGTACAGCACAAGAACTTGACCAGAATGCTAGCTGACGGTAGATCATaGATGAGTATGTCACGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YNSISTHKVQHKNLTRMLADGRS*MSMSRN Trigger: ATTACGTGACATACTCATCAATGATCTACCGTCAGC...TAGCATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGAGTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTACATGTACAGGTGAGACACTTCTTATTTGAACAACACGAAAGACAATGCATGATCTCTCCTTCTTaGTTCAGACCTAGATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVHVQVRHFLFEQHERQCMISPS*FRPRYH Trigger: GTGGTATCTAGGTCTGAACAAAGAAGGAGAGATCAT...GCATTGTCTTTCGTGTTGTTCAAATAAGAAGTGTCTCACCTGTACATGTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCCAAATACAGCTTGGTTaGAACTCCTTGAATAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRYNICCLGGTILNIALFQIQLG*NSLNSH Trigger: GTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTG...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACCAAATACAGCTTGGTTaGAACTCCTTGAATAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HFSSSRYNICCLGGTILNQIQLG*NSLNSH Trigger: GTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTG...GTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTATAATATATGTTGTTTAGGGGGAACCATTCTTAACATTGCCTTGTTCTTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRYNICCLGGTILNIALFFFFTW*PFMISP Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...GAACAAGGCAATGTTAAGAATGGTTCCCCCTAAACAACATATATTATACCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTAAATGTGCTGCAGGCTaGTTCTTCTTCACATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKHFSSSRYNICCLGGTIKCAAG*FFFTWL Trigger: CAACCATGTGAAGAAGAACAAGCCTGCAGCACATTT...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAACACTTTTCCAGTAGCAGGTATAATATATGTTGTTTAGGGGGAACCATTGAAAAGACGTTTAACTaGTTTTTGTCGCAGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKHFSSSRYNICCLGGTIEKTFN*FLSQLV Trigger: GACCAGCTGCGACAAAAACAAGTTAAACGTCTTTTC...AATGGTTCCCCCTAAACAACATATATTATACCTGCTACTGGAAAAGTGTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CAA 72 bp | GGCATTGGATTTCTCGCGCTCGCGGGCTTGTCTCTTTaGCCGGATGAGCGAGCTGGCGATAGCCGCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GIGFLALAGLSL*PDERAGDSRRH Trigger: ATGGCGGCGGCTATCGCCAGCTCGCTCATCCGGCAAAAGAGACAAGCCCGCGAGCGCGAGAAATCCAATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CAA 90 bp | GCTGCTGACACACTTGCAGGCATTGGATTTCTCGCGCTCGCGGGCTaGTCTCTTTTGCCGGATGAGCGAGCTGGCGATAGCCGCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AADTLAGIGFLALAG*SLLPDERAGDSRRH Trigger: ATGGCGGCGGCTATCGCCAGCTCGCTCATCCGGCAAAAGAGACAAGCCCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGTGTCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CAA 72 bp | CAGCTGGTCTTGCCTTTGCTGGGGCTGCTGACACACTaGCAGGCATTGGATTTCTCGCGCTCGCGGGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLVLPLLGLLTH*QALDFSRSRAC Trigger: ACAAGCCCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CCA 72 bp | TGCCTCCATTCAGTACACCAGAGACGCTTCTGCTCTTaGTCGGGGTCCCACTTCCAGATCGGGAGAACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CLHSVHQRRFCS*SGSHFQIGRTP Trigger: CGGAGTTCTCCCGATCTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCTCTGGTGTACTGAATGGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CAA 72 bp | ACACTTGCAGGCATTGGATTTCTCGCGCTCGCGGGCTaGTCTCTTTTGCCGGATGAGCGAGCTGGCGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLAGIGFLALAG*SLLPDERAGDS Trigger: GCTATCGCCAGCTCGCTCATCCGGCAAAAGAGACAAGCCCGCGAGCGCGAGAAATCCAATGCCTGCAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS TCA 72 bp | TTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCATTGGATTTCTCGCGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: FCRSWSCLCWGC*HTCRHWISRAR Trigger: GCGAGCGCGAGAAATCCAATGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS GCA 72 bp | TGGATTTGCCTCCATTCAGTACACCAGAGACGCTTCTaGTCTTGGTCGGGGTCCCACTTCCAGATCGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WICLHSVHQRRF*SWSGSHFQIGR Trigger: TCTCCCGATCTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCTCTGGTGTACTGAATGGAGGCAAATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CCA 72 bp | GAGTGTAAGTGCTGTCCTCGTCTTTGGTGCCATCAATaGTTCCATCTGCCTGCAGTTGCAAGTGGTAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ECKCCPRLWCHQ*FHLPAVASGSL Trigger: AAGGCTACCACTTGCAACTGCAGGCAGATGGAACCATTGATGGCACCAAAGACGAGGACAGCACTTACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CAA 90 bp | GGTGTACAAGTATCCCTCGCTGTTCATTGCCAAATACAGCTTGGTTaGAACTCCTTGAATAGCCACCACCCGAAGACCCACAGGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVQVSLAVHCQIQLG*NSLNSHHPKTHRDE Trigger: CTCATCCCTGTGGGTCTTCGGGTGGTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGATACTTGTACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CAA 72 bp | GAGCCAAAGAGTTTGACCCGGGAAAAGACGTTTAACTaGTTTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EPKSLTREKTFN*FLSQLVLPLLG Trigger: CCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACAAGTTAAACGTCTTTTCCCGGGTCAAACTCTTTGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CAA 72 bp | GTATCCCTCGCTGTTCATTGCCAAATACAGCTTGGTTaGAACTCCTTGAATAGCCACCACCCGAAGACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSLAVHCQIQLG*NSLNSHHPKTH Trigger: GTGGGTCTTCGGGTGGTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CAA 72 bp | AGGCTCTTCGGGTTCTGTGTTTTCTTTGTGGTGCACTaGCTTCAGCGGGCAGCAGAAGATTTCGTGACACTT | + |
|
Preference number: 6 (lower is better) Translates to: RLFGFCVFFVVH*LQRAAEDFVTL Trigger: AAGTGTCACGAAATCTTCTGCTGCCCGCTGAAGCAAGTGCACCACAAAGAAAACACAGAACCCGAAGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124402.2 |
||
| CDS CAA 90 bp | CTTAAGCTGAGGCTCTTCGGGTTCTGTGTTTTCTTTGTGGTGCACTaGCTTCAGCGGGCAGCAGAAGATTTCGTGACACTTAGCACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKLRLFGFCVFFVVH*LQRAAEDFVTLSTK Trigger: TTTCGTGCTAAGTGTCACGAAATCTTCTGCTGCCCGCTGAAGCAAGTGCACCACAAAGAAAACACAGAACCCGAAGAGCCTCAGCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124402.2 |
||
| CDS TCA 72 bp | GTCTCCTTCTGCGCCTCTTCTTGGAGCCAAAGAGTTTaGCCCGGGAAAAGACGTTTAACTTGTTTTTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSFCASSWSQRV*PGKRRLTCFCR Trigger: GCGACAAAAACAAGTTAAACGTCTTTTCCCGGGTCAAACTCTTTGGCTCCAAGAAGAGGCGCAGAAGGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
||
| CDS CCA 72 bp | GAGATGGCTCCTTGTACATGGCCACTTTCAGTGGTTTaGGCAGAAAATGTGCTGCAGGCTTGTTCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EMAPCTWPLSVV*AENVLQACSSS Trigger: TGAAGAAGAACAAGCCTGCAGCACATTTTCTGCCCAAACCACTGAAAGTGGCCATGTACAAGGAGCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
||
| CDS CAA 72 bp | GGTCTCCTTCTGCGCCTCTTCTTGGAGCCAAAGAGTTaGACCCGGGAAAAGACGTTTAACTTGTTTTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: GLLLRLFLEPKS*TREKTFNLFLS Trigger: CGACAAAAACAAGTTAAACGTCTTTTCCCGGGTCAAACTCTTTGGCTCCAAGAAGAGGCGCAGAAGGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033473.12 |
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| CDS GCA 72 bp | ATGTTCCGAGGTGTACAAGTATCCCTCGCTGTTCATTaGCAAATACAGCTTGGTTTGAACTCCTTGAATAGC | + |
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Preference number: 6 (lower is better) Translates to: MFRGVQVSLAVH*QIQLGLNSLNS Trigger: GCTATTCAAGGAGTTCAAACCAAGCTGTATTTGGCAATGAACAGCGAGGGATACTTGTACACCTCGGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033473.12 ENSMUST00000119306.2 ENSMUST00000119833.8 |
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