Pregenerated sensors for FGF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042826Ensembl transcript IDs: ENSMUST00000011285.11, ENSMUST00000102585.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGTGAGAGCGGCAAGGCCCGGCGCAGGGCTAGGACACAGGATGTaGCGGTGGCTGACTCACTGGAAGAGCAGGGAGCCTCCAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GVRAARPGAGLGHRM*RWLTHWKSREPPVQ Trigger: CTGGACTGGAGGCTCCCTGCTCTTCCAGTGAGTCAGCCACCGCCACATCCTGTGTCCTAGCCCTGCGCCGGGCCTTGCCGCTCTCACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR GCA 90 bp | CAGCCCCGAAGCTCCCACAGGGTGCAGCACCTGCTGAGACCTGACTaGTCAGGGCATGTGTGTGGCAACAGGGGTGAGAGCGGCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: QPRSSHRVQHLLRPD*SGHVCGNRGESGKA Trigger: GGCCTTGCCGCTCTCACCCCTGTTGCCACACACATGCCCTGAGCAGTCAGGTCTCAGCAGGTGCTGCACCCTGTGGGAGCTTCGGGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR CCA 90 bp | AGAGCGGCAAGGCCCGGCGCAGGGCTAGGACACAGGATGTGGCGGTaGCTGACTCACTGGAAGAGCAGGGAGCCTCCAGTCCAGGGACTA | + |
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Preference number: 1 (lower is better) Translates to: RAARPGAGLGHRMWR*LTHWKSREPPVQGL Trigger: TAGTCCCTGGACTGGAGGCTCCCTGCTCTTCCAGTGAGTCAGCCACCGCCACATCCTGTGTCCTAGCCCTGCGCCGGGCCTTGCCGCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR TCA 90 bp | GAGGTCCCTGACAGCCCCGAAGCTCCCACAGGGTGCAGCACCTGCTaGGACCTGACTGCTCAGGGCATGTGTGTGGCAACAGGGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: EVPDSPEAPTGCSTC*DLTAQGMCVATGVR Trigger: TCTCACCCCTGTTGCCACACACATGCCCTGAGCAGTCAGGTCTCAGCAGGTGCTGCACCCTGTGGGAGCTTCGGGGCTGTCAGGGACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR CCA 90 bp | GATCAGGCAGGGTCATCTCAGGCACCCCCATCTTGGGACCTCTCCTaGGCCCCAGGATCTAAGAGCTCAGCAACTCCGGAGGTCCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: DQAGSSQAPPSWDLS*APGSKSSATPEVPD Trigger: GTCAGGGACCTCCGGAGTTGCTGAGCTCTTAGATCCTGGGGCCCAGGAGAGGTCCCAAGATGGGGGTGCCTGAGATGACCCTGCCTGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR TCA 90 bp | ACGATGCAAAGAAGGACATGGCTTCAGAGACTGGCTCAGCCAGGGTaGAGAGTATTACCTTCCTGCCTTGAGTGTTGGAACCCCGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: TMQRRTWLQRLAQPG*RVLPSCLECWNPGA Trigger: GGCACCGGGGTTCCAACACTCAAGGCAGGAAGGTAATACTCTTCACCCTGGCTGAGCCAGTCTCTGAAGCCATGTCCTTCTTTGCATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR CCA 90 bp | CATACTTGGGTTCCAACACAGAACATAGGGATGGCCCTGCCTGGCTaGGGTGACCAGCTCTATCAGAACCTGTCCAGACCAAGTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HTWVPTQNIGMALPG*GDQLYQNLSRPSQK Trigger: CTTCTGACTTGGTCTGGACAGGTTCTGATAGAGCTGGTCACCCCAGCCAGGCAGGGCCATCCCTATGTTCTGTGTTGGAACCCAAGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR TCA 90 bp | ACGATGCAAAGAAGGACATGGCTTCAGAGACTGGCTCAGCCAGGGTaGAGAGTATTACCTTCCTGCCTTGAGTGTTGGAACCCCGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: TMQRRTWLQRLAQPG*RVLPSCLECWNPGA Trigger: AGCACCGGGGTTCCAACACTCAAGGCAGGAAGGTAATACTCTTCACCCTGGCTGAGCCAGTCTCTGAAGCCATGTCCTTCTTTGCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| 3UTR TCA 90 bp | CAGACCAAGTCAGAAGGTAGAGCAGAGAGAGAAGGAGATGCATTCTaGGTGCCAGTGGACCGACCTAGAAAGCTATGGCTTCGAGACGAT | + |
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Preference number: 1 (lower is better) Translates to: QTKSEGRAEREGDAF*VPVDRPRKLWLRDD Trigger: ATCGTCTCGAAGCCATAGCTTTCTAGGTCGGTCCACTGGCACTCAGAATGCATCTCCTTCTCTCTCTGCTCTACCTTCTGACTTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR GCA 90 bp | CCAAGTCAGAAGGTAGAGCAGAGAGAGAAGGAGATGCATTCTGAGTaGCAGTGGACCGACCTAGAAAGCTATGGCTTCGAGACGATGCAA | + |
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Preference number: 1 (lower is better) Translates to: PSQKVEQREKEMHSE*QWTDLESYGFETMQ Trigger: TTGCATCGTCTCGAAGCCATAGCTTTCTAGGTCGGTCCACTGGCACTCAGAATGCATCTCCTTCTCTCTCTGCTCTACCTTCTGACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR GCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTaGTATTGTAGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: CVCMCVCVLAFETGF*YCSPGWPPTQDLSD Trigger: ATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCTACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR CCA 90 bp | GAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGAAGTATaGCTCCAGAAAGGTCTAGAATACCACGTTCTAGAATTGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: ESHGLCPRTEIQEEV*LQKGLEYHVLELGV Trigger: GACACCCAATTCTAGAACGTGGTATTCTAGACCTTTCTGGAGCCATACTTCCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR CCA 90 bp | CCTGTATCTTTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTaGAATGCTGAAACTAGAAACCATGTAAAAGTAAGGTTAGTATTC | + |
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Preference number: 1 (lower is better) Translates to: PVSFPRLLSPWQNPS*NAETRNHVKVRLVF Trigger: GAATACTAACCTTACTTTTACATGGTTTCTAGTTTCAGCATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAAAGATACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR TCA 90 bp | CACCAAGCACAGCTCAGAGCCAATCAGTTTTTAATTAATCATAGCTaGGTTCTACCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: HQAQLRANQFLINHS*VLPIAHPLIARESG Trigger: TCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGGTAGAACTCAGCTATGATTAATTAAAAACTGATTGGCTCTGAGCTGTGCTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGGGATGTGGCGGTGGCTaGCTCACTGGAAGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SPGWPPTQDLSDSASRVLGCGGG*LTGRAG Trigger: CCCTGCTCTTCCAGTGAGTCAGCCACCGCCACATCC...CAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGGTGTGGCAACAGGGGTaGGAGCGGCAAGGCCCGGCG | + |
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Preference number: 2 (lower is better) Translates to: LAPSGKKGLRVMGYVLELVWQQG*ERQGPA Trigger: CGCCGGGCCTTGCCGCTCTCACCCCTGTTGCCACAC...CAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGACAGGCACCCCCATCTTaGGACCTCTCCTGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPSSIREERAESHGLCPRQAPPS*DLSWAP Trigger: TGGGGCCCAGGAGAGGTCCCAAGATGGGGGTGCCTG...TCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTGCTGAGTTGGGGGTCTCTCTGCTGTGAGGGGGAGTCAAGGCTGTGTCCCCAGCCTCCCGGGTGCTaGATTACAGGTGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLLSWGSLCCEGESRLCPQPPGC*ITGVCH Trigger: GTGGCACACACCTGTAATTCAGCACCCGGGAGGCTG...GGGACACAGCCTTGACTCCCCCTCACAGCAGAGAGACCCCCAACTCAGCAATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGAAGTATGGCTCCGGGTGCAGCACCTGCTaGGACCTGACTGCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LRVMGYVLELRFRRKYGSGCSTC*DLTAQG Trigger: GCCCTGAGCAGTCAGGTCTCAGCAGGTGCTGCACCC...GGAGCCATACTTCCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCTTGGAACCCCGGTGCTaGAAGAGCAGGGAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSGKKGLRVMGYVLELRFLEPRC*KSREPP Trigger: TGGAGGCTCCCTGCTCTTCCAGCACCGGGGTTCCAA...GAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| 3UTR-3UTR CCA 90 bp | CCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCATGGCCCTGCCTGGCTaGGGTGACCAGCTCTATCAG | + |
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Preference number: 2 (lower is better) Translates to: PSGKKGLRVMGYVLELRFMALPG*GDQLYQ Trigger: CTGATAGAGCTGGTCACCCCAGCCAGGCAGGGCCAT...GAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCCTGACCTGTAGAGGGCTCGGAGAAGTTGAACTTATTGCTGAGTTGGGGCCGGGAAGAAAGGGCTaGGAGTCATGGGCTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: LSLTCRGLGEVELIAELGPGRKG*ESWAMS Trigger: GGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGG...CCCCAACTCAGCAATAAGTTCAACTTCTCCGAGCCCTCTACAGGTCAGGCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAATCAGTGGTGACCTGAGACTGGTCCCAATTCAGACCAAGGCCAATTGCGTGTTGGAACCCCGGTaGTGGAAGAGCAGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GLISGDLRLVPIQTKANCVLEPR*WKSREP Trigger: AGGCTCCCTGCTCTTCCAGCACCGGGGTTCCAACAC...GCAATTGGCCTTGGTCTGAATTGGGACCAGTCTCAGGTCACCACTGATTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGAGAGTATTACCTTCCTaGCTTGAGTGTTGGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: CSPGWPPTQDLSDSASRVRVLPS*LECWNP Trigger: GGGGTTCCAACACTCAAGGCAGGAAGGTAATACTCT...CACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAGAGGCTCCTCGTTTCCTAAGCCTGACCTGTAGAGGGCTCGGAGAAGTTAGAGTATTACCTTCCTaGCTTGAGTGTTGGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: AQEAPRFLSLTCRGLGEVRVLPS*LECWNP Trigger: GGGGTTCCAACACTCAAGGCAGGAAGGTAATACTCT...AACTTCTCCGAGCCCTCTACAGGTCAGGCTTAGGAAACGAGGAGCCTCTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | AATATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGTCCTGCCTTGAGTGTTaGAACCCCGGTGCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: NMAIQALAPSGKKGLRVMSCLEC*NPGAGR Trigger: TCTTCCAGCACCGGGGTTCCAACACTCAAGGCAGGA...CATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| 3UTR-3UTR CCA 90 bp | TTATTGCTGAGTTGGGGGTCTCTCTGCTGTGAGGGGGAGTCAAGGCTGTGTCCCACTAGAGGTTCCCCATaGCTTTCTCCGTTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLSWGSLCCEGESRLCPTRGSP*LSPFFR Trigger: CCTGAAAAACGGAGAAAGCCATGGGGAACCTCTAGT...GGGACACAGCCTTGACTCCCCCTCACAGCAGAGAGACCCCCAACTCAGCAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGGTGACCAGCTCTATCAGAACCTGTCCAGACCAAGTCAGAAGGTAGAGCGACCTAGAAAGCTATaGCTTCGAGACGATGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GWGDQLYQNLSRPSQKVERPRKL*LRDDAK Trigger: CTTTGCATCGTCTCGAAGCCATAGCTTTCTAGGTCG...CTCTACCTTCTGACTTGGTCTGGACAGGTTCTGATAGAGCTGGTCACCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAAGAGGCTCCTCGTTTCCTAAGCCTGACCTGTAGAGGGCTCGGAGAAGTTGTGTGTATTGGCTTTTaGGACAGGGTTTTGCTATTG | + |
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Preference number: 2 (lower is better) Translates to: AQEAPRFLSLTCRGLGEVVCIGF*DRVLLL Trigger: CAATAGCAAAACCCTGTCTCAAAAGCCAATACACAC...AACTTCTCCGAGCCCTCTACAGGTCAGGCTTAGGAAACGAGGAGCCTCTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTGAGGTAGCTAAGTGTTCAGACACAGGTTCAATCATACCATGGCATTTTGCACCTGCTGAGACCTaGCTGCTCAGGGCATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PAEVAKCSDTGSIIPWHFAPAET*LLRACV Trigger: CACACATGCCCTGAGCAGTCAGGTCTCAGCAGGTGC...AAAATGCCATGGTATGATTGAACCTGTGTCTGAACACTTAGCTACCTCAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGAGAGAGAAGGAGATaGATTCTGAGTGCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LAPSGKKGLRVMGYVLELRERRR*ILSASG Trigger: TCCACTGGCACTCAGAATGCATCTCCTTCTCTCTCT...CAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCATGCAAAGAAGGACATaGCTTCAGAGACTGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PSGKKGLRVMGYVLELRFMQRRT*LQRLAQ Trigger: CTGAGCCAGTCTCTGAAGCCATGTCCTTCTTTGCAT...GAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTATCTTTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTGGAATGAGGTTTAATCAGTGGTaGCCTGAGACTGGTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: FLYLSPDSCLPGRTLVGMRFNQW*PETGPN Trigger: ATTGGGACCAGTCTCAGGTCACCACTGATTAAACCT...CATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAAAGATACAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTATCTTTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTGGAATGATGCAAAGAAGGACATaGCTTCAGAGACTGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLYLSPDSCLPGRTLVGMMQRRT*LQRLAQ Trigger: CTGAGCCAGTCTCTGAAGCCATGTCCTTCTTTGCAT...CATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAAAGATACAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGAAGGGTAGGTCTAGAACTAGGACACAGGATGTaGCGGTGGCTGACTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LPIAHPLIARESGRVGLELGHRM*RWLTHW Trigger: CCAGTGAGTCAGCCACCGCCACATCCTGTGTCCTAG...TTCTAGACCTACCCTTCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTGCTATTGTCCGGGAAGAAAGGGCTaGGAGTCATGGGCTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: CVCMCVCVLAFETGFCYCPGRKG*ESWAMS Trigger: GGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGG...ACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCTAGAGTTATTCTCATTGTAGACCTTAGCTTCCTGTTGTTTGAGACAGGGCAGCCTCCCGGGTGCTaGATTACAGGTGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: NSRVILIVDLSFLLFETGQPPGC*ITGVCH Trigger: GTGGCACACACCTGTAATTCAGCACCCGGGAGGCTG...CCCTGTCTCAAACAACAGGAAGCTAAGGTCTACAATGAGAATAACTCTAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | ATATCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTGCAGACCAAGGCCAATTaGTACAGTAGGGGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ISERKSSALKGIWKEFLLQTKAN*YSRGPL Trigger: AAGAGGCCCCCTACTGTAGCAATTGGCCTTGGTCTG...CAGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGAAGGGTAGGTCTAGAACAGACCAAGGCCAATTaGTACAGTAGGGGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPIAHPLIARESGRVGLEQTKAN*YSRGPL Trigger: AAGAGGCCCCCTACTGTAGCAATTGGCCTTGGTCTG...TTCTAGACCTACCCTTCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCAGCTTCCCTTCTAGGAGCCAGGTATATTCTTCCAGAATTCCTGTATCTAGACTCTTGTCTCCCTaGCAGAACCCTAGTTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: PLSFPSRSQVYSSRIPVSRLLSP*QNPSWN Trigger: ATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCT...AGATACAGGAATTCTGGAAGAATATACCTGGCTCCTAGAAGGGAAGCTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTGCTATTGTAGAGAGAGAAGGAGATaGATTCTGAGTGCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CVCMCVCVLAFETGFCYCRERRR*ILSASG Trigger: TCCACTGGCACTCAGAATGCATCTCCTTCTCTCTCT...ACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR TCA 90 bp | ATATCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTGGTGTGTATTGGCTTTTaGGACAGGGTTTTGCTATTG | + |
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Preference number: 2 (lower is better) Translates to: ISERKSSALKGIWKEFLLVCIGF*DRVLLL Trigger: CAATAGCAAAACCCTGTCTCAAAAGCCAATACACAC...CAGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR-3UTR CCA 90 bp | CATATCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTAGGAAAAGCAAGAAGTaGTTCTTGATCCGTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: HIRTKVLSFKRDLEGIPARKSKK*FLIRSV Trigger: TACTGAACGGATCAAGAACCACTTCTTGCTTTTCCT...AGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR CCA 72 bp | AGGCCCGGCGCAGGGCTAGGACACAGGATGTGGCGGTaGCTGACTCACTGGAAGAGCAGGGAGCCTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: RPGAGLGHRMWR*LTHWKSREPPV Trigger: GACTGGAGGCTCCCTGCTCTTCCAGTGAGTCAGCCACCGCCACATCCTGTGTCCTAGCCCTGCGCCGGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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| 3UTR TCA 72 bp | GACAGCCCCGAAGCTCCCACAGGGTGCAGCACCTGCTaGGACCTGACTGCTCAGGGCATGTGTGTGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: DSPEAPTGCSTC*DLTAQGMCVAT Trigger: TGTTGCCACACACATGCCCTGAGCAGTCAGGTCTCAGCAGGTGCTGCACCCTGTGGGAGCTTCGGGGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| 3UTR GCA 72 bp | AGCTCCCACAGGGTGCAGCACCTGCTGAGACCTGACTaGTCAGGGCATGTGTGTGGCAACAGGGGTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHRVQHLLRPD*SGHVCGNRGES Trigger: GCTCTCACCCCTGTTGCCACACACATGCCCTGAGCAGTCAGGTCTCAGCAGGTGCTGCACCCTGTGGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| 3UTR CCA 72 bp | AGTGATCAGGCAGGGTCATCTCAGGCACCCCCATCTTaGGACCTCTCCTGGGCCCCAGGATCTAAGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SDQAGSSQAPPS*DLSWAPGSKSS Trigger: TGAGCTCTTAGATCCTGGGGCCCAGGAGAGGTCCCAAGATGGGGGTGCCTGAGATGACCCTGCCTGATCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| 3UTR CCA 72 bp | GTTCCAACACAGAACATAGGGATGGCCCTGCCTGGCTaGGGTGACCAGCTCTATCAGAACCTGTCCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: VPTQNIGMALPG*GDQLYQNLSRP Trigger: TGGTCTGGACAGGTTCTGATAGAGCTGGTCACCCCAGCCAGGCAGGGCCATCCCTATGTTCTGTGTTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR TCA 72 bp | AACACAGAACATAGGGATGGCCCTGCCTGGCTGGGGTaGCCAGCTCTATCAGAACCTGTCCAGACCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTEHRDGPAWLG*PALSEPVQTKS Trigger: TGACTTGGTCTGGACAGGTTCTGATAGAGCTGGTCACCCCAGCCAGGCAGGGCCATCCCTATGTTCTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGAAGGGTAGGTCTAGAATCAGGCACCCCCATCTaGGGACCTCTCCTGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPIAHPLIARESGRVGLESGTPI*GPLLGP Trigger: GGGGCCCAGGAGAGGTCCCAAGATGGGGGTGCCTGA...TTCTAGACCTACCCTTCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| 3UTR CCA 72 bp | TCGAGACGATGCAAAGAAGGACATGGCTTCAGAGACTaGCTCAGCCAGGGTGAAGAGTATTACCTTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRRCKEGHGFRD*LSQGEEYYLPA Trigger: GGCAGGAAGGTAATACTCTTCACCCTGGCTGAGCCAGTCTCTGAAGCCATGTCCTTCTTTGCATCGTCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGTATTACCTTCCTGCCTaGAGTGTTGGAACCCCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GKKGLRVMGYVLELRFRRYYLPA*SVGTPV Trigger: CACCGGGGTTCCAACACTCAAGGCAGGAAGGTAATA...CCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR GCA 72 bp | AAGGTAGAGCAGAGAGAGAAGGAGATGCATTCTGAGTaGCAGTGGACCGACCTAGAAAGCTATGGCTTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: KVEQREKEMHSE*QWTDLESYGFE Trigger: CTCGAAGCCATAGCTTTCTAGGTCGGTCCACTGGCACTCAGAATGCATCTCCTTCTCTCTCTGCTCTACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR GCA 72 bp | GAGAAGTTGAACTTATTGCTGAGTTGGGGGTCTCTCTaGTGTGAGGGGGAGTCAAGGCTGTGTCCCTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: EKLNLLLSWGSL*CEGESRLCPYL Trigger: CAAATAGGGACACAGCCTTGACTCCCCCTCACAGCAGAGAGACCCCCAACTCAGCAATAAGTTCAACTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGTCTGATTCAGCCTCCCGGGTGCTGAATTACAGGTGTGTGCCACCAAGCGGAAAGGATACATACTaGGGTTCCAACACAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: DLSDSASRVLNYRCVPPSGKDTY*GSNTEH Trigger: ATGTTCTGTGTTGGAACCCAAGTATGTATCCTTTCC...GCTTGGTGGCACACACCTGTAATTCAGCACCCGGGAGGCTGAATCAGACAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGTACCACGTTCTAGAATaGGGTGTCTCTGGGATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NMAIQALAPSGKKGLRVMYHVLE*GVSGIR Trigger: TCTTATCCCAGAGACACCCAATTCTAGAACGTGGTA...CATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR GCA 72 bp | ATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTaGTATTGTAGCCCAGGATGGCCTCCAACTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MCVCVLAFETGF*YCSPGWPPTQD Trigger: ATCCTGAGTTGGAGGCCATCCTGGGCTACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR CCA 72 bp | GGGCTATGTCCTAGAACTGAGATTCAGGAGGAAGTATaGCTCCAGAAAGGTCTAGAATACCACGTTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLCPRTEIQEEV*LQKGLEYHVLE Trigger: TTCTAGAACGTGGTATTCTAGACCTTTCTGGAGCCATACTTCCTCCTGAATCTCAGTTCTAGGACATAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR CCA 72 bp | TTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTaGAATGCTGAAACTAGAAACCATGTAAAAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPRLLSPWQNPS*NAETRNHVKVR Trigger: CCTTACTTTTACATGGTTTCTAGTTTCAGCATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTAGAGTTATTCTCATTGTAGACCTTAGCTTCCTGTTGTTTGAGACAGGGTATTACCTTCCTGCCTaGAGTGTTGGAACCCCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NSRVILIVDLSFLLFETGYYLPA*SVGTPV Trigger: CACCGGGGTTCCAACACTCAAGGCAGGAAGGTAATA...CCCTGTCTCAAACAACAGGAAGCTAAGGTCTACAATGAGAATAACTCTAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTGAGGTAGCTAAGTGTTCAGACACAGGTTCAATCATACCATGGCATTTTTGTGTGTATTGGCTTTaGAGACAGGGTTTTGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: PAEVAKCSDTGSIIPWHFCVYWL*RQGFAI Trigger: AATAGCAAAACCCTGTCTCAAAAGCCAATACACACA...AAAATGCCATGGTATGATTGAACCTGTGTCTGAACACTTAGCTACCTCAGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| 3UTR TCA 72 bp | CAGCTCAGAGCCAATCAGTTTTTAATTAATCATAGCTaGGTTCTACCCATAGCTCATCCTTTAATTGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLRANQFLINHS*VLPIAHPLIAR Trigger: TCTAGCAATTAAAGGATGAGCTATGGGTAGAACTCAGCTATGATTAATTAAAAACTGATTGGCTCTGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGACGATGCCTTTGAGCTaGGGCTCTGGGCCGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGWPPTQDLSDSASRVLTMPLS*GSGPRS Trigger: GGACCGCGGCCCAGAGCCTCAGCTCAAAGGCATCGT...CAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGTGGCACTCTGGATGGTaGCCACACGGAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPGWPPTQDLSDSASRVWHSGW*PHGVPQ Trigger: CTGTGGGACTCCGTGTGGTCACCATCCAGAGTGCCA...CACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGCCTTGGACAGCAGGATaGGGAGCTGTTTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGWPPTQDLSDSASRVLPWTAG*GAVSGK Trigger: TTTGCCAGAAACAGCTCCTCATCCTGCTGTCCAAGG...CAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TTATTGCTGAGTTGGGGGTCTCTCTGCTGTGAGGGGGAGTCAAGGCTGTGTCCCTCCTCTGGGGTGCCCTaGATACTCCCATCGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSWGSLCCEGESRLCPSSGVP*ILPSGF Trigger: GAATCCCGATGGGAGTATCCAGGGCACCCCAGAGGA...GGGACACAGCCTTGACTCCCCCTCACAGCAGAGAGACCCCCAACTCAGCAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGACTGGTCCCAATTCAGACCAAGGCCAATTGCTACAGTAGGGGGCCTCTTGGAGCTGGTGTCCTCTaGGGTGCCCTGGATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPIQTKANCYSRGPLGAGVL*GALDTP Trigger: GGGAGTATCCAGGGCACCCCAGAGGACACCAGCTCC...AAGAGGCCCCCTACTGTAGCAATTGGCCTTGGTCTGAATTGGGACCAGTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGAGTGGGCAGGGGGACTaGAAGGGGAGGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YGYTGPSSIREERAESHGSGQGD*KGRSQE Trigger: TTCCTGAGACCTCCCCTTCCAGTCCCCCTGCCCACT...CCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCCCAGCTTGGCACTCTaGATGGTGACCACACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGYTGPSSIREERAESHGPSLAL*MVTTRS Trigger: ACTCCGTGTGGTCACCATCCAGAGTGCCAAGCTGGG...CCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAAGCGACACTCTGCTGTaGAATGTGGCGAGCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GPSSIREERAESHGLCPRSDTLL*NVASCT Trigger: TGTACAGCTCGCCACATTTCACAGCAGAGTGTCGCT...TCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGCCTGACCTGTAGAGGGCTCGGAGAAGTTGAACTTATTGCTGAGTTGGGGTGGTGTCCTCTGGGGTaGCCTGGATACTCCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTCRGLGEVELIAELGWCPLG*PGYSHR Trigger: CCGATGGGAGTATCCAGGGCACCCCAGAGGACACCA...CCCCAACTCAGCAATAAGTTCAACTTCTCCGAGCCCTCTACAGGTCAGGCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGACACAAAGTGGGCAGCTaGCTTGGTCTTCTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSIREERAESHGLCPRHKVGS*LGLLDS Trigger: CGAGTCAAGAAGACCAAGGCAGCTGCCCACTTTGTG...TCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAGGAATCAGATTGAAGTaGGTGAAGGAGCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSSIREERAESHGLCPRGIRLK*VKELVS Trigger: GGACACCAGCTCCTTCACCCACTTCAATCTGATTCC...TCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTGAGTTGGGGGTCTCTCTGCTGTGAGGGGGAGTCAAGGCTGTGTCCCCTTAAAGCGACACTCTaGTGTGAAATGTGGCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSWGSLCCEGESRLCPLKATL*CEMWRA Trigger: AGCTCGCCACATTTCACAGCAGAGTGTCGCTTTAAG...GGGACACAGCCTTGACTCCCCCTCACAGCAGAGAGACCCCCAACTCAGCAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTATCTTTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTGGAATGTCTGGCAAAGTGACTTaGTACCGCGGGGACACACGC | + |
|
Preference number: 4 (lower is better) Translates to: FLYLSPDSCLPGRTLVGMSGKVT*YRGDTR Trigger: GCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGA...CATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAAAGATACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGAGCTTGGGCACAAAGTaGGCAGCTGCCTTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKKGLRVMGYVLELRFRRSLGTK*AAALVF Trigger: GAAGACCAAGGCAGCTGCCCACTTTGTGCCCAAGCT...CCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | AATATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGAGCTTGGGCACAAAGTaGGCAGCTGCCTTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NMAIQALAPSGKKGLRVMSLGTK*AAALVF Trigger: GAAGACCAAGGCAGCTGCCCACTTTGTGCCCAAGCT...CATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGGTCTCAGGAACACTGTaGAGAGAAGGCTCCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKKGLRVMGYVLELRFRRVSGTL*REGSRY Trigger: GTACCGGGAGCCTTCTCTCCACAGTGTTCCTGAGAC...CCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCCCTTGGACAGCAGGATaGGGAGCTGTTTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSGKKGLRVMGYVLELRFPWTAG*GAVSGK Trigger: TTTGCCAGAAACAGCTCCTCATCCTGCTGTCCAAGG...GAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTATCTTTCCCCAGACTCTTGTCTCCCTGGCAGAACCCTAGTTGGAATGGTCTCAGGAACACTGTaGAGAGAAGGCTCCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLYLSPDSCLPGRTLVGMVSGTL*REGSRY Trigger: GTACCGGGAGCCTTCTCTCCACAGTGTTCCTGAGAC...CATTCCAACTAGGGTTCTGCCAGGGAGACAAGAGTCTGGGGAAAGATACAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGAAAGGTCTAGAATACCACGTTCTAGAATTGGGTGTCTCTGGGATAAGAGTGGGCAGGGGGACTaGAAGGGGAGGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: APERSRIPRSRIGCLWDKSGQGD*KGRSQE Trigger: TTCCTGAGACCTCCCCTTCCAGTCCCCCTGCCCACT...CTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTCTAGACCTTTCTGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | CATATCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTGGAGCTGGTGTCCTCTaGGGTGCCCTGGATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIRTKVLSFKRDLEGIPAGAGVL*GALDTP Trigger: GGGAGTATCCAGGGCACCCCAGAGGACACCAGCTCC...AGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTGAGGCCCAGCTTGGCACTCTaGATGGTGACCACACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SERKSSALKGIWKEFLLRPSLAL*MVTTRS Trigger: ACTCCGTGTGGTCACCATCCAGAGTGCCAAGCTGGG...CCTCAGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | GAATACCACGTTCTAGAATTGGGTGTCTCTGGGATAAGAAGGTTTAATCAGTGGTGGCACTCTGGATGGTaGCCACACGGAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EYHVLELGVSGIRRFNQWWHSGW*PHGVPQ Trigger: CTGTGGGACTCCGTGTGGTCACCATCCAGAGTGCCA...CCACTGATTAAACCTTCTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTGCTATTGTTGGTGTCCTCTGGGGTaGCCTGGATACTCCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCMCVCVLAFETGFCYCWCPLG*PGYSHR Trigger: CCGATGGGAGTATCCAGGGCACCCCAGAGGACACCA...ACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAGCTTCCCTTCTAGGAGCCAGGTATATTCTTCCAGAATTCCTGTATCTCACAAAGTGGGCAGCTaGCTTGGTCTTCTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLSFPSRSQVYSSRIPVSHKVGS*LGLLDS Trigger: CGAGTCAAGAAGACCAAGGCAGCTGCCCACTTTGTG...AGATACAGGAATTCTGGAAGAATATACCTGGCTCCTAGAAGGGAAGCTGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGAAGGGTAGGTCTAGAATCTGGCAAAGTGACTTaGTACCGCGGGGACACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LPIAHPLIARESGRVGLESGKVT*YRGDTR Trigger: GCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGA...TTCTAGACCTACCCTTCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR CCA 90 bp | CCCATAGCTCATCCTTTAATTGCTAGAGAAAGTGGAAGGGTAGGTCTAGAACTTGCCCCTCAGCGTTCATaGCCATGTAGTGACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIAHPLIARESGRVGLELAPQRS*PCSDPA Trigger: AGCTGGGTCACTACATGGCCATGAACGCTGAGGGGC...AAGTTCTAGACCTACCCTTCCACTTTCTCTAGCAATTAAAGGATGAGCTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | GAATACCACGTTCTAGAATTGGGTGTCTCTGGGATAAGAAGGTTTAATCAGTGGCTGTTTCTGGCAAAGTaGCTTGGTACCGCGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EYHVLELGVSGIRRFNQWLFLAK*LGTAGT Trigger: TGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAG...CCACTGATTAAACCTTCTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
||
| CDS-3UTR TCA 90 bp | ATATCAGAACGAAAGTCCTCAGCTTTAAAAGGGATCTGGAAGGAATTCCTGCTGCTGTTTCTGGCAAAGTaGCTTGGTACCGCGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ISERKSSALKGIWKEFLLLFLAK*LGTAGT Trigger: TGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAG...CAGCAGGAATTCCTTCCAGATCCCTTTTAAAGCTGAGGACTTTCGTTCTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCAGCTTCCCTTCTAGGAGCCAGGTATATTCTTCCAGAATTCCTGTATCTGGAATCAGATTGAAGTaGGTGAAGGAGCTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLSFPSRSQVYSSRIPVSGIRLK*VKELVS Trigger: GGACACCAGCTCCTTCACCCACTTCAATCTGATTCC...AGATACAGGAATTCTGGAAGAATATACCTGGCTCCTAGAAGGGAAGCTGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CCA 90 bp | GCTCCAGAAAGGTCTAGAATACCACGTTCTAGAATTGGGTGTCTCTGGGATAAGATGAGGAGCTGTTTCTaGCAAAGTGACTTGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: APERSRIPRSRIGCLWDKMRSCF*QSDLVP Trigger: CGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCAT...CTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTCTAGACCTTTCTGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CCA 90 bp | AATTCTAGAGTTATTCTCATTGTAGACCTTAGCTTCCTGTTGTTTGAGACAGGGGCCCCTCAGCGTTCATaGCCATGTAGTGACCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NSRVILIVDLSFLLFETGAPQRS*PCSDPA Trigger: AGCTGGGTCACTACATGGCCATGAACGCTGAGGGGC...CCCTGTCTCAAACAACAGGAAGCTAAGGTCTACAATGAGAATAACTCTAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| 3UTR CAA 72 bp | TGGCTCCAGAAAGGTCTAGAATACCACGTTCTAGAATaGGGTGTCTCTGGGATAAGAAGGTTTAATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: WLQKGLEYHVLE*GVSGIRRFNQW Trigger: CCACTGATTAAACCTTCTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTCTAGACCTTTCTGGAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTGCTATTGTATGAGGAGCTGTTTCTaGCAAAGTGACTTGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: CVCMCVCVLAFETGFCYCMRSCF*QSDLVP Trigger: CGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCAT...ACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS GCA 90 bp | TGGTACCGCGGGGACACACGCGCCGCTGCGCCGACACGGGCCGGCTaGCCCCGGGCTCGCGGACCTCCCGCTTCTGTCGGATCAGGCTAC | + |
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Preference number: 5 (lower is better) Translates to: WYRGDTRAAAPTRAG*PRARGPPASVGSGY Trigger: GTAGCCTGATCCGACAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCCGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGTACCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CCA 90 bp | CCCCCGCACAGTCGCACCTTGGACAGCAGGATGAGGAGCTGTTTCTaGCAAAGTGACTTGGTACCGCGGGGACACACGCGCCGCTGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PPHSRTLDSRMRSCF*QSDLVPRGHTRRCA Trigger: GGCGCAGCGGCGCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS TCA 90 bp | CAGTCGCACCTTGGACAGCAGGATGAGGAGCTGTTTCTGGCAAAGTaGCTTGGTACCGCGGGGACACACGCGCCGCTGCGCCGACACGGG | + |
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Preference number: 5 (lower is better) Translates to: QSHLGQQDEELFLAK*LGTAGTHAPLRRHG Trigger: CCCGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCATCCTGCTGTCCAAGGTGCGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGATGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGCCGCACAGTCGCACCTaGGACAGCAGGATGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SPGWPPTQDLSDSASRVLPHSRT*DSRMRS Trigger: GCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGG...CAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCATCCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCCGCACAGTCGCACCTaGGACAGCAGGATGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: YGYTGPSSIREERAESHGPHSRT*DSRMRS Trigger: GCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGG...CCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | GGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAATGACCCGGCCTTCCTaGTCCAGGCCTAGGTACCAG | + |
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Preference number: 5 (lower is better) Translates to: GPSSIREERAESHGLCPRMTRPS*SRPRYQ Trigger: CTGGTACCTAGGCCTGGACAAGGAAGGCCGGGTCAT...TCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CCA 90 bp | TCCCACAGGAATCAGATTGAAGTGGGTGAAGGAGCTGGTGTCCTCTaGGGTGCCCTGGATACTCCCATCGGGATTCGCCTGGAGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: SHRNQIEVGEGAGVL*GALDTPIGIRLEVE Trigger: TTCTACCTCCAGGCGAATCCCGATGGGAGTATCCAGGGCACCCCAGAGGACACCAGCTCCTTCACCCACTTCAATCTGATTCCTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGAAAGGGCTGAGAGTCATGGGCTATGTCCTAGAACTGAGATTCAGGAGGTTCTGGCAAAGTGACTaGGTACCGCGGGGACACACG | + |
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Preference number: 5 (lower is better) Translates to: GKKGLRVMGYVLELRFRRFWQSD*VPRGHT Trigger: CGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAA...CCTCCTGAATCTCAGTTCTAGGACATAGCCCATGACTCTCAGCCCTTTCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGAATTACAGGCCCACAGGAATCAGATaGAAGTGGGTGAAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: WPPTQDLSDSASRVLNYRPTGIR*KWVKEL Trigger: CAGCTCCTTCACCCACTTCAATCTGATTCCTGTGGG...CCTGTAATTCAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TATGGCTATACAGGCCCTAGCTCCATCCGGGAAGAAAGGGCTGAGAGTCATGGGCCCACAGGAATCAGATaGAAGTGGGTGAAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: YGYTGPSSIREERAESHGPTGIR*KWVKEL Trigger: CAGCTCCTTCACCCACTTCAATCTGATTCCTGTGGG...CCCATGACTCTCAGCCCTTTCTTCCCGGATGGAGCTAGGGCCTGTATAGCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTCCAACTCAGGATCTGTCTGATTCAGCCTCCCGGGTGCTGAATTACAGGGCTGCCTTGGTCTTCTaGACTCGGTTTCCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: WPPTQDLSDSASRVLNYRAALVF*TRFPFM Trigger: CATGAAGGGAAACCGAGTCAAGAAGACCAAGGCAGC...CCTGTAATTCAGCACCCGGGAGGCTGAATCAGACAGATCCTGAGTTGGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCCCTTCTAGGAGCCAGGTATATTCTTCCAGAATTCCTGTATCTTTCCATGACCCGGCCTTCCTaGTCCAGGCCTAGGTACCAG | + |
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Preference number: 5 (lower is better) Translates to: SASLLGARYILPEFLYLSMTRPS*SRPRYQ Trigger: CTGGTACCTAGGCCTGGACAAGGAAGGCCGGGTCAT...GGAAAGATACAGGAATTCTGGAAGAATATACCTGGCTCCTAGAAGGGAAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTGAGGTAGCTAAGTGTTCAGACACAGGTTCAATCATACCATGGCATTTTTTCTGGCAAAGTGACTaGGTACCGCGGGGACACACG | + |
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Preference number: 5 (lower is better) Translates to: PAEVAKCSDTGSIIPWHFFWQSD*VPRGHT Trigger: CGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAA...AAAATGCCATGGTATGATTGAACCTGTGTCTGAACACTTAGCTACCTCAGCAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTATGTGTGTGTGTGTATTGGCTTTTGAGACAGGGTTTTGCTATTGTTGGCGGCAGAACAGTTaGGTGACGATGCCTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: CVCMCVCVLAFETGFCYCWRQNS*VTMPLS Trigger: GCTCAAAGGCATCGTCACCAAACTGTTCTGCCGCCA...ACAATAGCAAAACCCTGTCTCAAAAGCCAATACACACACACACATACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS-3UTR CAA 90 bp | GAATACCACGTTCTAGAATTGGGTGTCTCTGGGATAAGAAGGTTTAATCAGTGGGCTGCCTTGGTCTTCTaGACTCGGTTTCCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EYHVLELGVSGIRRFNQWAALVF*TRFPFM Trigger: CATGAAGGGAAACCGAGTCAAGAAGACCAAGGCAGC...CCACTGATTAAACCTTCTTATCCCAGAGACACCCAATTCTAGAACGTGGTATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS GCA 72 bp | GGGGACACACGCGCCGCTGCGCCGACACGGGCCGGCTaGCCCCGGGCTCGCGGACCTCCCGCTTCTGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: GDTRAAAPTRAG*PRARGPPASVG Trigger: TCCGACAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCCGTGTCGGCGCAGCGGCGCGTGTGTCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CAA 90 bp | CGCACCTTGGACAGCAGGATGAGGAGCTGTTTCTGGCAAAGTGACTaGGTACCGCGGGGACACACGCGCCGCTGCGCCGACACGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RTLDSRMRSCFWQSD*VPRGHTRRCADTGR Trigger: CCGGCCCGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCATCCTGCTGTCCAAGGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS TCA 72 bp | TGGCGGCAGAACAGTTTGGTGACGATGCCTTTGAGCTaGGGCTCTGGGCCGCGGTCCTGTCGCGTGGGACGC | + |
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Preference number: 6 (lower is better) Translates to: WRQNSLVTMPLS*GSGPRSCRVGR Trigger: GCGTCCCACGCGACAGGACCGCGGCCCAGAGCCTCAGCTCAAAGGCATCGTCACCAAACTGTTCTGCCGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CCA 72 bp | GCAGGGGGACTGGAAGGGGAGGTCTCAGGAACACTGTaGAGAGAAGGCTCCCGGTACATGGCCACCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGGLEGEVSGTL*REGSRYMATSR Trigger: CCTGGAGGTGGCCATGTACCGGGAGCCTTCTCTCCACAGTGTTCCTGAGACCTCCCCTTCCAGTCCCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CAA 90 bp | GCCTTGGTCTTCTTGACTCGGTTTCCCTTCATGACCCGGCCTTCCTaGTCCAGGCCTAGGTACCAGGCCCGGCCAGAACGACGCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALVFLTRFPFMTRPS*SRPRYQARPERREL Trigger: CAGCTCGCGTCGTTCTGGCCGGGCCTGGTACCTAGGCCTGGACAAGGAAGGCCGGGTCATGAAGGGAAACCGAGTCAAGAAGACCAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| CDS CAA 72 bp | TTCTTGACTCGGTTTCCCTTCATGACCCGGCCTTCCTaGTCCAGGCCTAGGTACCAGGCCCGGCCAGAACGA | + |
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Preference number: 6 (lower is better) Translates to: FLTRFPFMTRPS*SRPRYQARPER Trigger: TCGTTCTGGCCGGGCCTGGTACCTAGGCCTGGACAAGGAAGGCCGGGTCATGAAGGGAAACCGAGTCAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CCA 72 bp | AACGACGCGAGCTGTACAATAGCCCCTCAGCGTTCATaGCCATGTAGTGACCCAGCTTGGCACTCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: NDASCTIAPQRS*PCSDPAWHSGW Trigger: CCATCCAGAGTGCCAAGCTGGGTCACTACATGGCCATGAACGCTGAGGGGCTATTGTACAGCTCGCGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011285.11 |
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| CDS CAA 72 bp | AGCTTGGGCACAAAGTGGGCAGCTGCCTTGGTCTTCTaGACTCGGTTTCCCTTCATGACCCGGCCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLGTKWAAALVF*TRFPFMTRPSL Trigger: CAAGGAAGGCCGGGTCATGAAGGGAAACCGAGTCAAGAAGACCAAGGCAGCTGCCCACTTTGTGCCCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011285.11 ENSMUST00000102585.2 |
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| CDS CCA 72 bp | AATGTGGCGAGCTGTACAATAGCCCCTCAGCGTTCATaGCCATGTAGTGACCCAGCTTGGCACTCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: NVASCTIAPQRS*PCSDPAWHSGW Trigger: CCATCCAGAGTGCCAAGCTGGGTCACTACATGGCCATGAACGCTGAGGGGCTATTGTACAGCTCGCCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102585.2 |
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