Pregenerated sensors for FGF10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021732Ensembl transcript IDs: ENSMUST00000022246.9
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCATGGTGCCACACCCAAAGCTCCTTTGGTTGTGCATATGATATaGCCCAAGTGCTTTCCAGTAAATGCTTGCGTGTCTTACTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: FHGATPKAPLVVHMI*PKCFPVNACVSYCS Trigger: TGAGCAGTAAGACACGCAAGCATTTACTGGAAAGCACTTGGGTCATATCATATGCACAACCAAAGGAGCTTTGGGTGTGGCACCATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR TCA 90 bp | CCCCACCACAACATTGTTCACTTGAGGATAACTTCCATCCAAACTTaGCTTGCCTCTATCTTGATTATAAGGCATGACACAATGACACAG | + |
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Preference number: 1 (lower is better) Translates to: PHHNIVHLRITSIQT*LASILIIRHDTMTQ Trigger: CTGTGTCATTGTGTCATGCCTTATAATCAAGATAGAGGCAAGTCAAGTTTGGATGGAAGTTATCCTCAAGTGAACAATGTTGTGGTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR GCA 90 bp | TCCTTTGGTTGTGCATATGATATGACCCAAGTGCTTTCCAGTAAATaGTTGCGTGTCTTACTGCTCATTGAATCATCAGGCTTGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: SFGCAYDMTQVLSSK*LRVLLLIESSGLNE Trigger: CTCATTCAAGCCTGATGATTCAATGAGCAGTAAGACACGCAAGCATTTACTGGAAAGCACTTGGGTCATATCATATGCACAACCAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR TCA 90 bp | AACTTCCATCCAAACTTGACTTGCCTCTATCTTGATTATAAGGCATaGCACAATGACACAGAGCTAGTGAAAAGAACTTTGTATGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: NFHPNLTCLYLDYKA*HNDTELVKRTLYVS Trigger: GCTGACATACAAAGTTCTTTTCACTAGCTCTGTGTCATTGTGTCATGCCTTATAATCAAGATAGAGGCAAGTCAAGTTTGGATGGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR TCA 90 bp | AGAGAATTTGGCCTTCTACATTTTAAGGTAAGGGTCCCTCTGGACTaGTATATGTTGACAAATGATGACAGATATCTGTTACATAATCTA | + |
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Preference number: 1 (lower is better) Translates to: REFGLLHFKVRVPLD*YMLTNDDRYLLHNL Trigger: TAGATTATGTAACAGATATCTGTCATCATTTGTCAACATATATCAGTCCAGAGGGACCCTTACCTTAAAATGTAGAAGGCCAAATTCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGGTGCTTTCCAGTAAATaGTTGCGTGTCTTACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTVLSSK*LRVLLL Trigger: GAGCAGTAAGACACGCAAGCATTTACTGGAAAGCAC...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGACTTCCATCCAAACTTaGCTTGCCTCTATCTTGATT | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTTSIQT*LASILI Trigger: AATCAAGATAGAGGCAAGTCAAGTTTGGATGGAAGT...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTTCATACTGCTTCCTTaGTCTCATCTCCTATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTFILLP*SHLLFL Trigger: CAGAAATAGGAGATGAGATCAAGGAAGCAGTATGAA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTTTCCAGTAAATGCTTaGGTGTCTTACTGCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTFPVNA*VSYCSL Trigger: CAATGAGCAGTAAGACACGCAAGCATTTACTGGAAA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGAGGATGGAGACAGAATaGACAAGCATACCATACTAT | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTRMETE*TSIPYY Trigger: ATAGTATGGTATGCTTGTGCATTCTGTCTCCATCCT...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTGTCAGAAAACAAGTTaGAAGAACACCACAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: VPVANTLQHGGAVPTLPTCQKTS*KNTTKC Trigger: GCATTTTGTGGTGTTCTTTCAACTTGTTTTCTGACA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTACAGAGCGAGGGTGCATGGCACACTTACATACTGCTTTCTATACCTTTTCTCAACTGAGAGCGCATaGGGCATTCATACTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IYRARVHGTLTYCFLYLFSTESA*GIHTAS Trigger: GGAAGCAGTATGAATGCCCCATGCGCTCTCAGTTGA...GAAAAGGTATAGAAAGCAGTATGTAAGTGTGCCATGCACCCTCGCTCTGTAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGGGAGAAGGATTCTGTGGGCCTTACAAAGGGCTCATGTATGTGCAGATAATGGGGCATTCATACTaGTTCCTTGATCTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: FEGEGFCGPYKGLMYVQIMGHSY*FLDLIS Trigger: GGAGATGAGATCAAGGAAGCAGTATGAATGCCCCAT...TATCTGCACATACATGAGCCCTTTGTAAGGCCCACAGAATCCTTCTCCCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTCCAATTCTTCCATGGTaGCACACCCAAAGCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGPILPW*HTQSSF Trigger: AAAGGAGCTTTGGGTGTGGCACCATGGAAGAATTGG...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTAGCTACAGTCTTCAGTaGGGATACCATCTCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGSYSLQ*GYHLFL Trigger: CAGAAAGAGATGGTATCCTCACTGAAGACTGTAGCT...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAAAGGGTCCCTCTGGACTaGTATATGTTGACAAATGAT | + |
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Preference number: 2 (lower is better) Translates to: NLCIICHCDLWQAIISRKRVPLD*YMLTND Trigger: ATCATTTGTCAACATATATCAGTCCAGAGGGACCCT...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTACAGAGCGAGGGTGCATGGCACACTTACATACTGCTTTCTATACCTTTTCTGTCCAAAGAGTCATTaGTTGTACTGCATCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: IYRARVHGTLTYCFLYLFCPKSH*LYCIHQ Trigger: TTGGTGGATGCAGTACAACCAATGACTCTTTGGACA...GAAAAGGTATAGAAAGCAGTATGTAAGTGTGCCATGCACCCTCGCTCTGTAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CAA 90 bp | CAAAGCCTTCCTTCCTTTAAACAAGCTGAATTCAGGGCTATGTCTTaGCCTTTTGAGCTACAGTCTTCAGTGAGGATACCATCTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QSLPSFKQAEFRAMS*PFELQSSVRIPSLS Trigger: AGAAAGAGATGGTATCCTCACTGAAGACTGTAGCTCAAAAGGCAAAGACATAGCCCTGAATTCAGCTTGTTTAAAGGAAGGAAGGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CAA 90 bp | ACGTCTGCACTATTTGCTGTTACCCTTGTCACTGAATACTATAGTTaGTCTCCCCAAACATTTAATTTTGGTTGTGGGTGGTCCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: TSALFAVTLVTEYYS*SPQTFNFGCGWSMV Trigger: GACCATGGACCACCCACAACCAAAATTAAATGTTTGGGGAGACAAACTATAGTATTCAGTGACAAGGGTAACAGCAAATAGTGCAGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTTATGTCTTTGCCTTTTaGGCTACAGTCTTCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGYVFAF*ATVFSE Trigger: CTCACTGAAGACTGTAGCTCAAAAGGCAAAGACATA...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAACTTGATTATAAGGCATaGCACAATGACACAGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: NLCIICHCDLWQAIISRKLDYKA*HNDTEL Trigger: TAGCTCTGTGTCATTGTGTCATGCCTTATAATCAAG...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTGTTGTGCATATGATATaGCCCAAGTGCTTTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGVVHMI*PKCFPV Trigger: TACTGGAAAGCACTTGGGTCATATCATATGCACAAC...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAAAGTCATTGGTTGTACTaGATCCACCAACAGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: NLCIICHCDLWQAIISRKSHWLY*IHQQCF Trigger: AAAACACTGTTGGTGGATGCAGTACAACCAATGACT...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTGCATATGATATGACCCAAGTGCTTTCCAGTAAATGCTTGCGTGTCTTATCAGGGCTATGTCTTTaGCTTTTGAGCTACAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GCAYDMTQVLSSKCLRVLSGLCL*LLSYSL Trigger: AAGACTGTAGCTCAAAAGGCAAAGACATAGCCCTGA...TAAGACACGCAAGCATTTACTGGAAAGCACTTGGGTCATATCATATGCACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAATCTATAGCAGAATTCTaGCATAGTCATTGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: NLCIICHCDLWQAIISRKSIAEF*HSHCWC Trigger: ACACCAGCAATGACTATGGCAGAATTCTGCTATAGA...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTACAGAGCGAGGGTGCATGGCACACTTACATACTGCTTTCTATACCTTTTCTGTGCAGATAACCTTTaGATCATTTGCCATTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: IYRARVHGTLTYCFLYLFCADNL*IICHCD Trigger: GTCACAATGGCAAATGATGCAAAGGTTATCTGCACA...GAAAAGGTATAGAAAGCAGTATGTAAGTGTGCCATGCACCCTCGCTCTGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATGGGGGGAAATGTAGGGTaGGAGAGGGGGAAAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: KNLLSPYRIHFVFISVRMGGNVG*ERGKDV Trigger: AACATCTTTCCCCCTCTCCCACCCTACATTTCCCCC...CATCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAAACAAGGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTTGAACACCAGAGGGCAGCATTaGAGATACTCTTTAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: YRKQGLCGSVKTRPFSLNTRGQH*RYSLNP Trigger: GGGGTTTAAAGAGTATCTTCAATGCTGCCCTCTGGT...GTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACCTTGTTTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTGGCTTGAATGAGCAATaGAAGTCTTTGATATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGGLNEQ*KSLICV Trigger: AACACATATCAAAGACTTTCATTGCTCATTCAAGCC...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CAA 90 bp | CCCTTGTCACTGAATACTATAGTTTGTCTCCCCAAACATTTAATTTaGGTTGTGGGTGGTCCATGGTCATGTGTCAGGTATAATTATTAT | + |
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Preference number: 2 (lower is better) Translates to: PLSLNTIVCLPKHLI*VVGGPWSCVRYNYY Trigger: ATAATAATTATACCTGACACATGACCATGGACCACCCACAACCAAAATTAAATGTTTGGGGAGACAAACTATAGTATTCAGTGACAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAAACAAGGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTTGAACTTTGTATGTCAGCAGTaGGTACAAAAACATCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YRKQGLCGSVKTRPFSLNFVCQQ*VQKHPK Trigger: CTTTGGATGTTTTTGTACTCACTGCTGACATACAAA...GTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACCTTGTTTTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGACTCATCTCCTATTTCTaGAGTGTTTGCCAAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RRISSLLTEFILYLSLLGLISYF*SVCQGF Trigger: AAAACCTTGGCAAACACTTCAGAAATAGGAGATGAG...TCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CAA 90 bp | CAAAGTGAAATAAGAATCCAACGTCTGCACTATTTGCTGTTACCCTaGTCACTGAATACTATAGTTTGTCTCCCCAAACATTTAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSEIRIQRLHYLLLP*SLNTIVCLPKHLIL Trigger: CAAAATTAAATGTTTGGGGAGACAAACTATAGTATTCAGTGACAAGGGTAACAGCAAATAGTGCAGACGTTGGATTCTTATTTCACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATGAACAGACACATTTGGTaGGTCTTTTTGTTCCTATCA | + |
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Preference number: 2 (lower is better) Translates to: KNLLSPYRIHFVFISVRMNRHIW*VFLFLS Trigger: TGATAGGAACAAAAAGACTCACCAAATGTGTCTGTT...CATCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR GCA 72 bp | TACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTaGCCACACTTCCCACGGAGGCAGAACTCACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: YPWLTHFSMVEQ*PHFPRRQNSQN Trigger: ATTTTGTGAGTTCTGCCTCCGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGCTAGTGAAAAGAACTTaGTATGTCAGCAGTGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: VPVANTLQHGGAVPTLPTLVKRT*YVSSEY Trigger: GTACTCACTGCTGACATACAAAGTTCTTTTCACTAG...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGGTAAACCAGAGGGCAGCACTGTCCAAAGAGTCATaGGTTGTACTGCATCCACCA | + |
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Preference number: 3 (lower is better) Translates to: EREREREREREKVNQRAALSKES*VVLHPP Trigger: TGGTGGATGCAGTACAACCAATGACTCTTTGGACAG...TGCTGCCCTCTGGTTTACCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR TCA 72 bp | GCCACACCCAAAGCTCCTTTGGTTGTGCATATGATATaGCCCAAGTGCTTTCCAGTAAATGCTTGCGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ATPKAPLVVHMI*PKCFPVNACVS Trigger: AGACACGCAAGCATTTACTGGAAAGCACTTGGGTCATATCATATGCACAACCAAAGGAGCTTTGGGTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR GCA 72 bp | GCCTTACAAAGGGCTCATGTATGTGCAGATAACCTTTaGATCATTTGCCATTGTGACCTGTGGCAAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: ALQRAHVCADNL*IICHCDLWQAI Trigger: GATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTTATCTGCACATACATGAGCCCTTTGTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAAAACCAGAGGGCAGCATaGAAGATACTCTTTAAACCC | + |
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Preference number: 3 (lower is better) Translates to: NLCIICHCDLWQAIISRKNQRAA*KILFKP Trigger: GGGTTTAAAGAGTATCTTCAATGCTGCCCTCTGGTT...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR GCA 72 bp | TCTGTATCTTTAAGGAGTCTGATGTCAACAGTCATATaGTCTGTACCCGTGGCTAACACACTTCAGCATGGT | + |
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Preference number: 3 (lower is better) Translates to: SVSLRSLMSTVI*SVPVANTLQHG Trigger: ACCATGCTGAAGTGTGTTAGCCACGGGTACAGAGCATATGACTGTTGACATCAGACTCCTTAAAGATACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CCA 72 bp | ATTGCAGAAGTGCAAATTAAGTCAACTGAGAGCGCATaGGGCATTCATACTGCTTCCTTGATCTCATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: IAEVQIKSTESA*GIHTASLISSP Trigger: AGGAGATGAGATCAAGGAAGCAGTATGAATGCCCCATGCGCTCTCAGTTGACTTAATTTGCACTTCTGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR GCA 72 bp | TGTGCATATGATATGACCCAAGTGCTTTCCAGTAAATaGTTGCGTGTCTTACTGCTCATTGAATCATCAGGC | + |
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Preference number: 3 (lower is better) Translates to: CAYDMTQVLSSK*LRVLLLIESSG Trigger: GCCTGATGATTCAATGAGCAGTAAGACACGCAAGCATTTACTGGAAAGCACTTGGGTCATATCATATGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | TACAGAAAACAAGGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTTGAACAAGCCCCAGGGAGAGTaGCACTTCATACCAAATTTC | + |
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Preference number: 3 (lower is better) Translates to: YRKQGLCGSVKTRPFSLNKPQGE*HFIPNF Trigger: GAAATTTGGTATGAAGTGCAACTCTCCCTGGGGCTT...GTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACCTTGTTTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGACCAAAGAGTCATTGGTaGTACTGCATCCACCAACAG | + |
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Preference number: 3 (lower is better) Translates to: RRISSLLTEFILYLSLLGPKSHW*YCIHQQ Trigger: CTGTTGGTGGATGCAGTACAACCAATGACTCTTTGG...TCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR-3UTR CAA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTACCAAATTTCCTTTTTaGGTTCTTTTGAGGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGTKFPF*VLLREK Trigger: CTTCTCCCTCAAAAGAACCAAAAAAGGAAATTTGGT...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| 3UTR CCA 72 bp | ACGTGTTTATTTAGTGATCTACAGAGCGAGGGTGCATaGCACACTTACATACTGCTTTCTATACCTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TCLFSDLQSEGA*HTYILLSIPFL Trigger: TAGAAAAGGTATAGAAAGCAGTATGTAAGTGTGCCATGCACCCTCGCTCTGTAGATCACTAAATAAACACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAAAGATCATTCAACAGAGTGTTCCATGTTCTTTAAGTTCTATCTCAGATTCAGGGCTATGTCTTaGCCTTTTGAGCTACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPKDHSTECSMFFKFYLRFRAMS*PFELQS Trigger: AGACTGTAGCTCAAAAGGCAAAGACATAGCCCTGAA...TCTGAGATAGAACTTAAAGAACATGGAACACTCTGTTGAATGATCTTTGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATGCTTTCCAGTAAATGCTaGCGTGTCTTACTGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: KNLLSPYRIHFVFISVRMLSSKC*RVLLLI Trigger: AATGAGCAGTAAGACACGCAAGCATTTACTGGAAAG...CATCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGAACTAGACCATTCAGCTaGAACAGGTGTCAGTATATG | + |
|
Preference number: 3 (lower is better) Translates to: RRISSLLTEFILYLSLLGTRPFS*NRCQYM Trigger: CATATACTGACACCTGTTCAAGCTGAATGGTCTAGT...TCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR TCA 72 bp | AACATTGTTCACTTGAGGATAACTTCCATCCAAACTTaGCTTGCCTCTATCTTGATTATAAGGCATGACACA | + |
|
Preference number: 3 (lower is better) Translates to: NIVHLRITSIQT*LASILIIRHDT Trigger: TGTGTCATGCCTTATAATCAAGATAGAGGCAAGTCAAGTTTGGATGGAAGTTATCCTCAAGTGAACAATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR GCA 72 bp | CAACCTATACCCATAAACCAAAGCATTGTGCCTCTGTaGTTTTCTCTTGAAATGCAAGCTTTTCAAAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QPIPINQSIVPL*FSLEMQAFQRN Trigger: ATTTCTTTGAAAAGCTTGCATTTCAAGAGAAAAGCACAGAGGCACAATGCTTTGGTTTATGGGTATAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGCAAGAGCTTGGCAGGTaGCAGGGAACGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VPVANTLQHGGAVPTLPTQELGR*QGTKTP Trigger: TGGTGTCTTCGTTCCCTGTCACCTGCCAAGCTCTTG...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR GCA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTCCTTTTCCATTCAATaGCACATACATTTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVANTLQHGGAVPTLPTSFSIQ*HIHLPA Trigger: GGCAGGCAAATGTATGTGGCATTGAATGGAAAAGGA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CCA 90 bp | AACCTTTGCATCATTTGCCATTGTGACCTGTGGCAAGCCATCATCAGTAGGAAACATGCCTTCCCGCACTaGAAGGAGAGGAGAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: NLCIICHCDLWQAIISRKHAFPH*KERRRT Trigger: CGTCCTTCTCCTCTCCTTCCAGTGCGGGAAGGCATG...TTTCCTACTGATGATGGCTTGCCACAGGTCACAATGGCAAATGATGCAAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | ATCTACAGAGCGAGGGTGCATGGCACACTTACATACTGCTTTCTATACCTTTTCCAGGTGGGGAAAGGCTaGGGCACAATGTGTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IYRARVHGTLTYCFLYLFQVGKG*GTMCQY Trigger: ATACTGACACATTGTGCCTCAGCCTTTCCCCACCTG...GAAAAGGTATAGAAAGCAGTATGTAAGTGTGCCATGCACCCTCGCTCTGTAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTAAGAAGAGCAGTTGGTaGCCTCCTGTGACACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGKKSSW*PPVTPC Trigger: ACATGGTGTCACAGGAGGCCACCAACTGCTCTTCTT...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTATGTTTGGATCGTCATaGGGAGGAAGTGAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGMFGSS*GGSEQR Trigger: CCTCTGCTCACTTCCTCCCCATGACGATCCAAACAT...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR CAA 72 bp | CCAGGGAGAGTTGCACTTCATACCAAATTTCCTTTTTaGGTTCTTTTGAGGGAGAAGGATTCTGTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRVALHTKFPF*VLLREKDSVGL Trigger: AAGGCCCACAGAATCCTTCTCCCTCAAAAGAACCAAAAAAGGAAATTTGGTATGAAGTGCAACTCTCCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAAGATCATTCAACAGAGTGTTCCATGTTCTTTAAGTTCTATCTCAGATGTGACACCATGTCCTaGCCAAGAGCTTGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKDHSTECSMFFKFYLRCDTMS*PRAWQV Trigger: CACCTGCCAAGCTCTTGGTCAGGACATGGTGTCACA...TCTGAGATAGAACTTAAAGAACATGGAACACTCTGTTGAATGATCTTTGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR CAA 72 bp | CCTTCCTTTAAACAAGCTGAATTCAGGGCTATGTCTTaGCCTTTTGAGCTACAGTCTTCAGTGAGGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFKQAEFRAMS*PFELQSSVRIP Trigger: TGGTATCCTCACTGAAGACTGTAGCTCAAAAGGCAAAGACATAGCCCTGAATTCAGCTTGTTTAAAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAAGATCATTCAACAGAGTGTTCCATGTTCTTTAAGTTCTATCTCAGACATTCTTGGTCCCGCTaGCCTTGCCGTTCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPKDHSTECSMFFKFYLRHSWSR*PCRSSQ Trigger: TTGAGAAGAACGGCAAGGTCAGCGGGACCAAGAATG...TCTGAGATAGAACTTAAAGAACATGGAACACTCTGTTGAATGATCTTTGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAAGATCATTCAACAGAGTGTTCCATGTTCTTTAAGTTCTATCTCAGAGTCATGGGGAGGAAGTaGGCAGAGGTGTTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPKDHSTECSMFFKFYLRVMGRK*AEVFFL Trigger: AAGGAAAAACACCTCTGCTCACTTCCTCCCCATGAC...TCTGAGATAGAACTTAAAGAACATGGAACACTCTGTTGAATGATCTTTGGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAAAACAAGGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTTGAACAATGCCACATACATTTaGCTGCCATTGTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRKQGLCGSVKTRPFSLNNATYI*LPLCCQ Trigger: CTGGCAGCACAATGGCAGGCAAATGTATGTGGCATT...GTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACCTTGTTTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR TCA 90 bp | TACAGAAAACAAGGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTTGAACAACTCCGATTTCCACTaGTGTTATCTCCAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: YRKQGLCGSVKTRPFSLNNSDFH*CYLQDT Trigger: AGTGTCCTGGAGATAACATCAGTGGAAATCGGAGTT...GTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACCTTGTTTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR GCA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTCTGCCAGTTAAAAGATaGATAGGTGTTGTATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGLPVKR*IGVVSI Trigger: AATGGATACAACACCTATGCATCTTTTAACTGGCAG...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR CAA 72 bp | CTGAATACTATAGTTTGTCTCCCCAAACATTTAATTTaGGTTGTGGGTGGTCCATGGTCATGTGTCAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTIVCLPKHLI*VVGGPWSCVRY Trigger: ATACCTGACACATGACCATGGACCACCCACAACCAAAATTAAATGTTTGGGGAGACAAACTATAGTATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR CAA 72 bp | ATAAGAATCCAACGTCTGCACTATTTGCTGTTACCCTaGTCACTGAATACTATAGTTTGTCTCCCCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IRIQRLHYLLLP*SLNTIVCLPKH Trigger: ATGTTTGGGGAGACAAACTATAGTATTCAGTGACAAGGGTAACAGCAAATAGTGCAGACGTTGGATTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| 3UTR CAA 72 bp | GGTTTATGTGGTTCTGTAAAGACTAGACCATTCAGCTaGAACAGGTGTCAGTATATGGTTACTCATATACTA | + |
|
Preference number: 4 (lower is better) Translates to: GLCGSVKTRPFS*NRCQYMVTHIL Trigger: TAGTATATGAGTAACCATATACTGACACCTGTTCAAGCTGAATGGTCTAGTCTTTACAGAACCACATAAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATGTCCCCTTCTTGTTCATaGCTAAGTAATAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLLSPYRIHFVFISVRMSPSCS*LSNSCC Trigger: ACAGCAACTATTACTTAGCCATGAACAAGAAGGGGA...CATCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS TCA 90 bp | GAGGAGGAAGAAGAGCAGTTGGTGGCCTCCTGTGACACCATGTCCTaGCCAAGAGCTTGGCAGGTGACAGGGAACGAAGACACCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEEEEQLVASCDTMS*PRAWQVTGNEDTKK Trigger: CTTTTTGGTGTCTTCGTTCCCTGTCACCTGCCAAGCTCTTGGTCAGGACATGGTGTCACAGGAGGCCACCAACTGCTCTTCTTCCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTTGCTGTTGATGGCTTaGACGGCAACAACTCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: VPVANTLQHGGAVPTLPTLLLMA*TATTPI Trigger: AATCGGAGTTGTTGCCGTCAAAGCCATCAACAGCAA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGGTAAACCAGAGGGCAGCAGAGGAAGAAGAGCAGTaGGTGGCCTCCTGTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: EREREREREREKVNQRAAEEEEQ*VASCDT Trigger: GGTGTCACAGGAGGCCACCAACTGCTCTTCTTCCTC...TGCTGCCCTCTGGTTTACCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGATCGTGAGAAAGTACTaGGTGAAGGAGAACAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPVANTLQHGGAVPTLPTIVRKY*VKENSL Trigger: AAGGCTGTTCTCCTTCACCAAGTACTTTCTCACGAT...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGGTAAACCAGAGGGCAGCAGGACAGTCTTCATTCTaGGTCCCGCTGACCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EREREREREREKVNQRAAGQSSF*VPLTLP Trigger: CGGCAAGGTCAGCGGGACCAAGAATGAAGACTGTCC...TGCTGCCCTCTGGTTTACCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | GTACCCGTGGCTAACACACTTCAGCATGGTGGAGCAGTGCCCACACTTCCCACGTACATTTGCCTGCCATaGTGCTGCCAGTTAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPVANTLQHGGAVPTLPTYICLP*CCQLKD Trigger: ATCTTTTAACTGGCAGCACAATGGCAGGCAAATGTA...CGTGGGAAGTGTGGGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGGAGAAGGATTCTGTGGGCCTTACAAAGGGCTCATGTATGTGCAGATAGTCCTGACCAAGAGCTaGGCAGGTGACAGGGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: FEGEGFCGPYKGLMYVQIVLTKS*AGDRER Trigger: TCGTTCCCTGTCACCTGCCAAGCTCTTGGTCAGGAC...TATCTGCACATACATGAGCCCTTTGTAAGGCCCACAGAATCCTTCTCCCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | CAGACACTGCAAATAAGGCTTACGTGTTTATTTAGTGATCTACAGAGCGAGGGTCCAGCGGACATCTCCTaGGAGGTGATTGTAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTLQIRLTCLFSDLQSEGPADIS*EVIVAP Trigger: CGGAGCTACAATCACCTCCAAGGAGATGTCCGCTGG...ACCCTCGCTCTGTAGATCACTAAATAAACACGTAAGCCTTATTTGCAGTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATGTTGGTCCCGCTGACCTaGCCGTTCTTCTCAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNLLSPYRIHFVFISVRMLVPLT*PFFSIV Trigger: CACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAA...CATCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAAAGATCATTCAACAGAGTGTTCCATGTTCTTTAAGTTCTATCTCAGACAATGCCACATACATTaGCCTGCCATTGTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPKDHSTECSMFFKFYLRQCHIH*PAIVLP Trigger: TGGCAGCACAATGGCAGGCAAATGTATGTGGCATTG...TCTGAGATAGAACTTAAAGAACATGGAACACTCTGTTGAATGATCTTTGGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATTTCCTTCTTGTTTTTaGTCCTCTCCTGGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRISSLLTEFILYLSLLGFPSCF*SSPGSS Trigger: GGAGCTCCCAGGAGAGGACAAAAAACAAGAAGGAAA...TCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAATCTCCTCTCTCCTTACCGAATTCATTTTGTATTTATCTCTGTTAGGATTCAGCTTACAGTCGTaGTTAAACTCTTTTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRISSLLTEFILYLSLLGFSLQS*LNSFEP Trigger: TGGCTCAAAAGAGTTTAACAACGACTGTAAGCTGAA...TCCTAACAGAGATAAATACAAAATGAATTCGGTAAGGAGAGAGGAGATTCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS TCA 72 bp | GGACGAGGAGGAAGAAGAGCAGTTGGTGGCCTCCTGTaGCACCATGTCCTGACCAAGAGCTTGGCAGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGGRRAVGGLL*HHVLTKSLAGD Trigger: GTCACCTGCCAAGCTCTTGGTCAGGACATGGTGTCACAGGAGGCCACCAACTGCTCTTCTTCCTCCTCGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 72 bp | GGTGAAGGAGAACAGCCTTCTCCAGCGGACATCTCCTaGGAGGTGATTGTAGCTCCGCACATGCCTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GEGEQPSPADIS*EVIVAPHMPSR Trigger: GCGGGAAGGCATGTGCGGAGCTACAATCACCTCCAAGGAGATGTCCGCTGGAGAAGGCTGTTCTCCTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS TCA 72 bp | GAAGAGCAGTTGGTGGCCTCCTGTGACACCATGTCCTaGCCAAGAGCTTGGCAGGTGACAGGGAACGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EEQLVASCDTMS*PRAWQVTGNED Trigger: GTCTTCGTTCCCTGTCACCTGCCAAGCTCTTGGTCAGGACATGGTGTCACAGGAGGCCACCAACTGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 90 bp | AAAGTACTTGGTGAAGGAGAACAGCCTTCTCCAGCGGACATCTCCTaGGAGGTGATTGTAGCTCCGCACATGCCTTCCCGCACTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KVLGEGEQPSPADIS*EVIVAPHMPSRTGR Trigger: CCTTCCAGTGCGGGAAGGCATGTGCGGAGCTACAATCACCTCCAAGGAGATGTCCGCTGGAGAAGGCTGTTCTCCTTCACCAAGTACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 90 bp | TTGGTCCCGCTGACCTTGCCGTTCTTCTCAATCGTGAGAAAGTACTaGGTGAAGGAGAACAGCCTTCTCCAGCGGACATCTCCTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVPLTLPFFSIVRKY*VKENSLLQRTSPWR Trigger: CCTCCAAGGAGATGTCCGCTGGAGAAGGCTGTTCTCCTTCACCAAGTACTTTCTCACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 72 bp | GTTATCTCCAGGACACTGTACGGACAGTCTTCATTCTaGGTCCCGCTGACCTTGCCGTTCTTCTCAATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VISRTLYGQSSF*VPLTLPFFSIV Trigger: CACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAAGAATGAAGACTGTCCGTACAGTGTCCTGGAGATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 90 bp | TCCAGGACACTGTACGGACAGTCTTCATTCTTGGTCCCGCTGACCTaGCCGTTCTTCTCAATCGTGAGAAAGTACTTGGTGAAGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRTLYGQSSFLVPLT*PFFSIVRKYLVKEN Trigger: GTTCTCCTTCACCAAGTACTTTCTCACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAAGAATGAAGACTGTCCGTACAGTGTCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 72 bp | CTGACCTTGCCGTTCTTCTCAATCGTGAGAAAGTACTaGGTGAAGGAGAACAGCCTTCTCCAGCGGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: LTLPFFSIVRKY*VKENSLLQRTS Trigger: AGATGTCCGCTGGAGAAGGCTGTTCTCCTTCACCAAGTACTTTCTCACGATTGAGAAGAACGGCAAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 72 bp | CTGTACGGACAGTCTTCATTCTTGGTCCCGCTGACCTaGCCGTTCTTCTCAATCGTGAGAAAGTACTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LYGQSSFLVPLT*PFFSIVRKYLV Trigger: CACCAAGTACTTTCTCACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAAGAATGAAGACTGTCCGTACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 90 bp | TCCACTGATGTTATCTCCAGGACACTGTACGGACAGTCTTCATTCTaGGTCCCGCTGACCTTGCCGTTCTTCTCAATCGTGAGAAAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: STDVISRTLYGQSSF*VPLTLPFFSIVRKY Trigger: GTACTTTCTCACGATTGAGAAGAACGGCAAGGTCAGCGGGACCAAGAATGAAGACTGTCCGTACAGTGTCCTGGAGATAACATCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS TCA 72 bp | GTTGATGGCTTTGACGGCAACAACTCCGATTTCCACTaGTGTTATCTCCAGGACACTGTACGGACAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDGFDGNNSDFH*CYLQDTVRTVF Trigger: GAAGACTGTCCGTACAGTGTCCTGGAGATAACATCAGTGGAAATCGGAGTTGTTGCCGTCAAAGCCATCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
||
| CDS CAA 90 bp | TTGTCCTCTCCTGGGAGCTCCTTTTCCATTCAATGCCACATACATTaGCCTGCCATTGTGCTGCCAGTTAAAAGATGCATAGGTGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSSPGSSFSIQCHIH*PAIVLPVKRCIGVV Trigger: TACAACACCTATGCATCTTTTAACTGGCAGCACAATGGCAGGCAAATGTATGTGGCATTGAATGGAAAAGGAGCTCCCAGGAGAGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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| CDS CAA 72 bp | CCTGGGAGCTCCTTTTCCATTCAATGCCACATACATTaGCCTGCCATTGTGCTGCCAGTTAAAAGATGCATA | + |
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Preference number: 6 (lower is better) Translates to: PGSSFSIQCHIH*PAIVLPVKRCI Trigger: TATGCATCTTTTAACTGGCAGCACAATGGCAGGCAAATGTATGTGGCATTGAATGGAAAAGGAGCTCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022246.9 |
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