Pregenerated sensors for FGA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028001Ensembl transcript IDs: ENSMUST00000029630.15, ENSMUST00000166581.4
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGTTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACAAAGTTCCCAGAGTCTaGGCCAGGTCTAGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RLGNGCSVPGKHFAVMVNKVPRV*ARSRAS Trigger: GGAAGCCCTAGACCTGGCTCAGACTCTGGGAACTTT...GTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | AGGTTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACGCGCCTCAGGTCTTCTaGCACTTGCCCATAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RLGNGCSVPGKHFAVMVNAPQVF*HLPISV Trigger: AACACTTATGGGCAAGTGTCAGAAGACCTGAGGCGC...GTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | AGGTTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACCCAGAAAGGTCAGGATaGCTTTCAGAGAGTTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: RLGNGCSVPGKHFAVMVNPERSG*LSESSS Trigger: CGACGAACTCTCTGAAAGGCATCCTGACCTTTCTGG...GTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CCA 90 bp | AGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGATCTCTCCACAACTCTTaGGCCACGTACTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RHLGITEIDTWSSPCPQGSLHNS*ATYSSS Trigger: GGAGGAGGAGTACGTGGCCCAAGAGTTGTGGAGAGA...TCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | AGGTTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACGTTGCGCTTTCTCTATaGCTTTTCGCCTCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: RLGNGCSVPGKHFAVMVNVALSL*LFASGS Trigger: AGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAAC...GTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | TGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCGGCATCGCCACAGTCTaGGCCATCATCCGAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: CTVRHLGITEIDTWSSPCGIATV*AIIRGD Trigger: ATCACCTCGGATGATGGCTCAGACTGTGGCGATGCC...GCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CCA 90 bp | AGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAGAAAACTCAGGTACATaGGAGCTGGGGTCCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: RHLGITEIDTWSSPCPQGENSGT*ELGSSM Trigger: CATTGAGGACCCCAGCTCCCATGTACCTGAGTTTTC...TCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | ACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCTTTCATCCTGCAGCCTaGAGGGCATTTGTGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TVRHLGITEIDTWSSPCPFHPAA*RAFVVP Trigger: TGGAACCACAAATGCCCTTCAGGCTGCAGGATGAAA...GGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | ACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCTTCTTGTGGCTGGGCTaGTACTGTCTCCAAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: TVRHLGITEIDTWSSPCPFLWLG*YCLQTL Trigger: CAGAGTTTGGAGACAGTAGCAGCCCAGCCACAAGAA...GGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CCA 90 bp | AGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAGATACTCTTTTCTTGTaGCTGGGCTGCTACTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RHLGITEIDTWSSPCPQGDTLFL*LGCYCL Trigger: GAGACAGTAGCAGCCCAGCCACAAGAAAAGAGTATC...TCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | TTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACTTATGCAAGAGCGGATCTTaGTATCAATATCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGNGCSVPGKHFAVMVNLCKSGS*YQYPPP Trigger: TGGAGGTGGATATTGATATCAAGATCCGCTCTTGCA...TAAGTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | GGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTAGCTCCATTCTCATCTaGCGCATTTCTGTTAATGCC | + |
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Preference number: 4 (lower is better) Translates to: GITEIDTWSSPCPQGTYSSSILI*RISVNA Trigger: GGCATTAACAGAAATGCGGCAGATGAGAATGGAGCT...ACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | AATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTCTGTGAGCTTCGCTTCCTaGCTCGTCTGCCATTTTATA | + |
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Preference number: 4 (lower is better) Translates to: NYRNRHMVKSLPPRNVQSVSFAS*LVCHFI Trigger: TATAAAATGGCAGACGAGGCAGGAAGCGAAGCTCAC...AGACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CCA 90 bp | AATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTCTCTGCCGCTAAAACTGTaGGATATGTCTAACTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: NYRNRHMVKSLPPRNVQSLPLKL*DMSNSV Trigger: CACCGAGTTAGACATATCCCACAGTTTTAGCGGCAG...AGACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | AATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTCTACCGCTTTACCTGTGTaGTACTCTTTTCTTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NYRNRHMVKSLPPRNVQSTALPV*YSFLVA Trigger: AGCCACAAGAAAAGAGTATCACACAGGTAAAGCGGT...AGACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | TGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCAGTGCTGGCAAGTACTaGCTGTCTTTTGTAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CTVRHLGITEIDTWSSPCSAGKY*LSFVGS Trigger: GCTTCCTACAAAAGACAGGCAGTACTTGCCAGCACT...GCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | TGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCAATGGTTTTAGAGCATaGACGATGTGTGGTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: CTVRHLGITEIDTWSSPCNGFRA*TMCGAC Trigger: ACAAGCACCACACATCGTTCATGCTCTAAAACCATT...GCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CCA 90 bp | AATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTCTCTGTTTGTAAAATCCTaGTTGGCTTCGTCAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: NYRNRHMVKSLPPRNVQSLFVKS*LASSIN Trigger: GTTGATTGACGAAGCCAACCAGGATTTTACAAACAG...AGACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR TCA 90 bp | TGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCGATATTCCTGGTCAGTaGGTTAGAATCCTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: CTVRHLGITEIDTWSSPCDIPGQ*VRILVV Trigger: AACAACAAGGATTCTAACTCACTGACCAGGAATATC...GCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR GCA 90 bp | AGAAATGACTGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCATCAACCCTTTCATCCTaGAGCCTGAAGGGCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: RNDCTVRHLGITEIDTWSSTLSS*SLKGIC Trigger: ACAAATGCCCTTCAGGCTGCAGGATGAAAGGGTTGA...TGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCAGTCATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS GCA 90 bp | TCCAGCAGTGCCCCGGTAGGAGGAGACCTGCAGCGCGTAGCCCTCTaGCTCAGAGCCTACCCGGAAGTGGTACTCCGCATAAGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SSSAPVGGDLQRVAL*LRAYPEVVLRISLF Trigger: AAAGAGGCTTATGCGGAGTACCACTTCCGGGTAGGCTCTGAGGCAGAGGGCTACGCGCTGCAGGTCTCCTCCTACCGGGGCACTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 90 bp | AAACACACCCCAGTTAGGGTTGGCAGGCCTAAAGTTCCCAGAGTCTaGGCCAGGTCTAGGGCTTCCGGTACCCCAGTCTCCAGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: KHTPVRVGRPKVPRV*ARSRASGTPVSSAI Trigger: GATGGCACTGGAGACTGGGGTACCGGAAGCCCTAGACCTGGCTCAGACTCTGGGAACTTTAGGCCTGCCAACCCTAACTGGGGTGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 90 bp | GGCGGCCTGACAGCTGTTGTACCACCAGCCTCCCCCATAGACCTCTaGACAGTTCTCTTCCCATTGGTCGGCATCTCTGTCAAAGGTACT | + |
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Preference number: 5 (lower is better) Translates to: GGLTAVVPPASPIDL*TVLFPLVGISVKGT Trigger: AGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGAACTGTGCAGAGGTCTATGGGGGAGGCTGGTGGTACAACAGCTGTCAGGCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 90 bp | ATCTGCCGCATTTCTGTTAATGCCTTCCACTCTGGAGGGGCCTCCTaGAGCTGGCTCTTAAAACTTCCGGGAACCAAGTCGGGAACTGGA | + |
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Preference number: 5 (lower is better) Translates to: ICRISVNAFHSGGAS*SWLLKLPGTKSGTG Trigger: TCCAGTTCCCGACTTGGTTCCCGGAAGTTTTAAGAGCCAGCTTCAGGAGGCCCCTCCAGAGTGGAAGGCATTAACAGAAATGCGGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 90 bp | CACCAGCGGTCTGATTTTCATCCGAACGGCCCTGAGGGAATAATCTaGTCCTCTGAAGGGAACCCAGACCACCCCGTTCTCTATCTCATA | + |
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Preference number: 5 (lower is better) Translates to: HQRSDFHPNGPEGII*SSEGNPDHPVLYLI Trigger: TATGAGATAGAGAACGGGGTGGTCTGGGTTCCCTTCAGAGGAGCAGATTATTCCCTCAGGGCCGTTCGGATGAAAATCAGACCGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 90 bp | AGGGCATTTGTGGTTCCAGTCATCATCAGAGCAGAAGGGCCAGTCTaGGTCCTTGCATTGACTCTGATGTCTCTCCACAACTCTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RAFVVPVIIRAEGPV*VLALTLMSLHNSWA Trigger: GGCCCAAGAGTTGTGGAGAGACATCAGAGTCAATGCAAGGACTCAGACTGGCCCTTCTGCTCTGATGATGACTGGAACCACAAATGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 90 bp | CCCGGACATTGCTCTGCAGAGCTTGAATCTGTTGCGCTTTCTCTATaGCTTTTCGCCTCAGGATCTCAATTCTGCGCCTCAGGTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PGHCSAELESVALSL*LFASGSQFCASGLL Trigger: CAGAAGACCTGAGGCGCAGAATTGAGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAATGTCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 90 bp | CTGCACAGTTCTCTTCCCATTGGTCGGCATCTCTGTCAAAGGTACTaGACTGCATGTTGCTGTGTGAGGTGTATTCTGTCCCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LHSSLPIGRHLCQRY*TACCCVRCILSPPP Trigger: TGGAGGAGGGGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGAACTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS GCA 90 bp | CAGTTCTCTTCCCATTGGTCGGCATCTCTGTCAAAGGTACTGAACTaGATGTTGCTGTGTGAGGTGTATTCTGTCCCCTCCTCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: QFSSHWSASLSKVLN*MLLCEVYSVPSSTE Trigger: CTCTGTGGAGGAGGGGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS-3UTR CAA 90 bp | TGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCGTCTCTCCACAACTCTaGGGCCACGTACTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CTVRHLGITEIDTWSSPCVSPQL*GHVLLL Trigger: GAGGAGGAGTACGTGGCCCAAGAGTTGTGGAGAGAC...GCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CAA 90 bp | AGGTTAGGAAACGGGTGCAGCGTGCCTGGTAAGCACTTCGCAGTAATGGTTAACTGTGATACTCTTTTCTaGTGGCTGGGCTGCTACTGT | + |
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Preference number: 5 (lower is better) Translates to: RLGNGCSVPGKHFAVMVNCDTLF*WLGCYC Trigger: ACAGTAGCAGCCCAGCCACAAGAAAAGAGTATCACA...GTTAACCATTACTGCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS TCA 90 bp | GCGACCATCAGGACCTGTGACAGTCTTGGTAATGGTTTTAGAGCATaGACGATGTGTGGTGCTTGTGCCAGAAGAGGTGACTTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ATIRTCDSLGNGFRA*TMCGACARRGDFLL Trigger: AAGGAGAAAGTCACCTCTTCTGGCACAAGCACCACACATCGTTCATGCTCTAAAACCATTACCAAGACTGTCACAGGTCCTGATGGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 90 bp | ACTGGATCCAGGTGGCTTGATACTGAAAATGCCATTTTGGGCACCTaGAGTTTGTGTTTGGAGGACATCATCACAGTCTCTCGTTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: TGSRWLDTENAILGT*SLCLEDIITVSRWA Trigger: CGCCCAACGAGAGACTGTGATGATGTCCTCCAAACACAAACTTCAGGTGCCCAAAATGGCATTTTCAGTATCAAGCCACCTGGATCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS-3UTR CAA 90 bp | GGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTGTGTTATCAAAGTTGTaGGCATTCGCGAAGTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GITEIDTWSSPCPQGTYSVLSKL*AFAKSP Trigger: AGGGGACTTCGCGAATGCCAACAACTTTGATAACAC...ACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CAA 90 bp | AGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGATTTAGCGATGACCTGTaGAAGCTGTTTTTGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: RHLGITEIDTWSSPCPQGFSDDL*KLFLVT Trigger: GGTCACCAAAAACAGCTTCAACAGGTCATCGCTAAA...TCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS TCA 90 bp | TATGACTTTTCGCCTCAGGATCTCAATTCTGCGCCTCAGGTCTTCTaGCACTTGCCCATAAGTGTTATCAAAGTTGTTGGCATTCGCGAA | + |
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Preference number: 5 (lower is better) Translates to: YDFSPQDLNSAPQVF*HLPISVIKVVGIRE Trigger: TTCGCGAATGCCAACAACTTTGATAACACTTATGGGCAAGTGTCAGAAGACCTGAGGCGCAGAATTGAGATCCTGAGGCGAAAAGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS-3UTR CAA 90 bp | AGAAATGACTGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAACACCCCAGTTAGGGTaGGCAGGCCTAAAGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RNDCTVRHLGITEIDTWSTPQLG*AGLKFP Trigger: TGGGAACTTTAGGCCTGCCAACCCTAACTGGGGTGT...TGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCAGTCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CAA 90 bp | ACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCGGACCTGTGACAGTCTaGGTAATGGTTTTAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: TVRHLGITEIDTWSSPCPGPVTV*VMVLEH Trigger: ATGCTCTAAAACCATTACCAAGACTGTCACAGGTCC...GGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS CCA 90 bp | TGGGAGCTGGGGTCCTCAATGTTTGTGAGGATGTCGGAATCAGAATaGGTCTTACTGCCAAATTCTTTGAAGTTAGGTGAGATTAAACCA | + |
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Preference number: 5 (lower is better) Translates to: WELGSSMFVRMSESE*VLLPNSLKLGEIKP Trigger: TGGTTTAATCTCACCTAACTTCAAAGAATTTGGCAGTAAGACCCATTCTGATTCCGACATCCTCACAAACATTGAGGACCCCAGCTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS-3UTR CAA 90 bp | AATTACAGAAATAGACACATGGTCAAGTCCCTGCCCCCAAGGAACGTACAGTCTTTTGTAAAATCCTGGTaGGCTTCGTCAATCAACCCT | + |
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Preference number: 5 (lower is better) Translates to: NYRNRHMVKSLPPRNVQSFVKSW*ASSINP Trigger: AGGGTTGATTGACGAAGCCAACCAGGATTTTACAAA...AGACTGTACGTTCCTTGGGGGCAGGGACTTGACCATGTGTCTATTTCTGTAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS-3UTR CAA 90 bp | AGAAATGACTGCACTGTTAGGCATTTGGGAATTACAGAAATAGACACATGGTCAATTGCTCTGCAGAGCTaGAATCTGTTGCGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RNDCTVRHLGITEIDTWSIALQS*NLLRFL Trigger: GAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAAT...TGACCATGTGTCTATTTCTGTAATTCCCAAATGCCTAACAGTGCAGTCATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029630.15 |
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| CDS TCA 90 bp | TCCATGATATTCCTGGTCAGTGAGTTAGAATCCTTGTTGTTCCTTTaGAAGTCAAATAGTGAGTTTTTGAGCTTGTTGATTCTGTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: SMIFLVSELESLLFL*KSNSEFLSLLILFV Trigger: TACAAACAGAATCAACAAGCTCAAAAACTCACTATTTGACTTTCAAAGGAACAACAAGGATTCTAACTCACTGACCAGGAATATCATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 72 bp | GCCCCGGTAGGAGGAGACCTGCAGCGCGTAGCCCTCTaGCTCAGAGCCTACCCGGAAGTGGTACTCCGCATA | + |
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Preference number: 6 (lower is better) Translates to: APVGGDLQRVAL*LRAYPEVVLRI Trigger: TATGCGGAGTACCACTTCCGGGTAGGCTCTGAGGCAGAGGGCTACGCGCTGCAGGTCTCCTCCTACCGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 72 bp | CCAGTTAGGGTTGGCAGGCCTAAAGTTCCCAGAGTCTaGGCCAGGTCTAGGGCTTCCGGTACCCCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PVRVGRPKVPRV*ARSRASGTPVS Trigger: GGAGACTGGGGTACCGGAAGCCCTAGACCTGGCTCAGACTCTGGGAACTTTAGGCCTGCCAACCCTAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 72 bp | ACAGCTGTTGTACCACCAGCCTCCCCCATAGACCTCTaGACAGTTCTCTTCCCATTGGTCGGCATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TAVVPPASPIDL*TVLFPLVGISV Trigger: GACAGAGATGCCGACCAATGGGAAGAGAACTGTGCAGAGGTCTATGGGGGAGGCTGGTGGTACAACAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CCA 72 bp | AGTTTGTGTTTGGAGGACATCATCACAGTCTCTCGTTaGGCGAGCTCTGGCACGGCCCCTCTTAGTGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: SLCLEDIITVSR*ASSGTAPLSVA Trigger: CGCAACACTAAGAGGGGCCGTGCCAGAGCTCGCCCAACGAGAGACTGTGATGATGTCCTCCAAACACAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GGGCTGCTACTGTCTCCAAACTCTGAAAACACACCCCAGTTAGGGTaGGCAGGCCTAAAGTTCCCAGAGTCTGAGCCAGGTCTAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GLLLSPNSENTPQLG*AGLKFPESEPGLGL Trigger: AAGCCCTAGACCTGGCTCAGACTCTGGGAACTTTAGGCCTGCCAACCCTAACTGGGGTGTGTTTTCAGAGTTTGGAGACAGTAGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GTGGCATCGCCACAGTCTGAGCCATCATCCGAGGTGATCACTTCTTaGACCACTTCTCGGCGACCATCAGGACCTGTGACAGTCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VASPQSEPSSEVITS*TTSRRPSGPVTVLV Trigger: TACCAAGACTGTCACAGGTCCTGATGGTCGCCGAGAAGTGGTCAAAGAAGTGATCACCTCGGATGATGGCTCAGACTGTGGCGATGCCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 72 bp | TCTGATTTTCATCCGAACGGCCCTGAGGGAATAATCTaGTCCTCTGAAGGGAACCCAGACCACCCCGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SDFHPNGPEGII*SSEGNPDHPVL Trigger: GAGAACGGGGTGGTCTGGGTTCCCTTCAGAGGAGCAGATTATTCCCTCAGGGCCGTTCGGATGAAAATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 72 bp | CCACAGTCTGAGCCATCATCCGAGGTGATCACTTCTTaGACCACTTCTCGGCGACCATCAGGACCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: PQSEPSSEVITS*TTSRRPSGPVT Trigger: TGTCACAGGTCCTGATGGTCGCCGAGAAGTGGTCAAAGAAGTGATCACCTCGGATGATGGCTCAGACTGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | TCTTCCCATTGGTCGGCATCTCTGTCAAAGGTACTGAACTGCATGTaGCTGTGTGAGGTGTATTCTGTCCCCTCCTCCACAGAGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSHWSASLSKVLNCM*LCEVYSVPSSTEPC Trigger: GCAGGGCTCTGTGGAGGAGGGGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GTACCACCAGCCTCCCCCATAGACCTCTGCACAGTTCTCTTCCCATaGGTCGGCATCTCTGTCAAAGGTACTGAACTGCATGTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VPPASPIDLCTVLFP*VGISVKGTELHVAV Trigger: CACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGAACTGTGCAGAGGTCTATGGGGGAGGCTGGTGGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 72 bp | CAGCCCTGCTGCAGGACCCTTTGCAAGAGCGGATCTTaGTATCAATATCCACCTCCAGGCGCTTCATGTCTA | + |
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Preference number: 6 (lower is better) Translates to: QPCCRTLCKSGS*YQYPPPGASCL Trigger: TAGACATGAAGCGCCTGGAGGTGGATATTGATATCAAGATCCGCTCTTGCAAAGGGTCCTGCAGCAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | ACAGCCCTGCTGCAGGACCCTTTGCAAGAGCGGATCTaGATATCAATATCCACCTCCAGGCGCTTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: TALLQDPLQERI*ISISTSRRFMS Trigger: AGACATGAAGCGCCTGGAGGTGGATATTGATATCAAGATCCGCTCTTGCAAAGGGTCCTGCAGCAGGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | CTGTCTCCAAACTCTGAAAACACACCCCAGTTAGGGTaGGCAGGCCTAAAGTTCCCAGAGTCTGAGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LSPNSENTPQLG*AGLKFPESEPG Trigger: ACCTGGCTCAGACTCTGGGAACTTTAGGCCTGCCAACCCTAACTGGGGTGTGTTTTCAGAGTTTGGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | GCCTCCCCCATAGACCTCTGCACAGTTCTCTTCCCATaGGTCGGCATCTCTGTCAAAGGTACTGAACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: ASPIDLCTVLFP*VGISVKGTELH Trigger: ATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGAACTGTGCAGAGGTCTATGGGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 72 bp | ATTTCTGTTAATGCCTTCCACTCTGGAGGGGCCTCCTaGAGCTGGCTCTTAAAACTTCCGGGAACCAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: ISVNAFHSGGAS*SWLLKLPGTKS Trigger: CGACTTGGTTCCCGGAAGTTTTAAGAGCCAGCTTCAGGAGGCCCCTCCAGAGTGGAAGGCATTAACAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 72 bp | GTTGCGAGTTTCTCCTTCCCGGTGAGCTTCGCTTCCTaGCTCGTCTGCCATTTTATAGGTCTTGGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: VASFSFPVSFAS*LVCHFIGLGYL Trigger: CAAGTAACCAAGACCTATAAAATGGCAGACGAGGCAGGAAGCGAAGCTCACCGGGAAGGAGAAACTCGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS GCA 72 bp | TCCCATTGGTCGGCATCTCTGTCAAAGGTACTGAACTaGATGTTGCTGTGTGAGGTGTATTCTGTCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHWSASLSKVLN*MLLCEVYSVPS Trigger: GGAGGGGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 72 bp | CTGAGCCCGGACATTGCTCTGCAGAGCTTGAATCTGTaGCGCTTTCTCTATGACTTTTCGCCTCAGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LSPDIALQSLNL*RFLYDFSPQDL Trigger: GAGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAATGTCCGGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | TGGTCGGCATCTCTGTCAAAGGTACTGAACTGCATGTaGCTGTGTGAGGTGTATTCTGTCCCCTCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: WSASLSKVLNCM*LCEVYSVPSST Trigger: TGTGGAGGAGGGGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GCGCTTCATGTCTATCAACTGAGCCCGGACATTGCTCTGCAGAGCTaGAATCTGTTGCGCTTTCTCTATGACTTTTCGCCTCAGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALHVYQLSPDIALQS*NLLRFLYDFSPQDL Trigger: GAGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAATGTCCGGGCTCAGTTGATAGACATGAAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | GTTGGCTTCGTCAATCAACCCTTTCATCCTGCAGCCTaGAGGGCATTTGTGGTTCCAGTCATCATCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VGFVNQPFHPAA*RAFVVPVIIRA Trigger: TGCTCTGATGATGACTGGAACCACAAATGCCCTTCAGGCTGCAGGATGAAAGGGTTGATTGACGAAGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | TTTTCTTGTGGCTGGGCTGCTACTGTCTCCAAACTCTaGAAACACACCCCAGTTAGGGTTGGCAGGCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: FSCGWAATVSKL*KHTPVRVGRPK Trigger: TTTAGGCCTGCCAACCCTAACTGGGGTGTGTTTTCAGAGTTTGGAGACAGTAGCAGCCCAGCCACAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | ACTCAGGTACATGGGAGCTGGGGTCCTCAATGTTTGTaGGGATGTCGGAATCAGAATGGGTCTTACTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TQVHGSWGPQCL*GCRNQNGSYCQ Trigger: TTGGCAGTAAGACCCATTCTGATTCCGACATCCTCACAAACATTGAGGACCCCAGCTCCCATGTACCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | ACCACTTCTCGGCGACCATCAGGACCTGTGACAGTCTaGGTAATGGTTTTAGAGCATGAACGATGTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TTSRRPSGPVTV*VMVLEHERCVV Trigger: CACCACACATCGTTCATGCTCTAAAACCATTACCAAGACTGTCACAGGTCCTGATGGTCGCCGAGAAGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GCCAGTCTGAGTCCTTGCATTGACTCTGATGTCTCTCCACAACTCTaGGGCCACGTACTCCTCCTCCTTCTGATAGGAATTCACCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ASLSPCIDSDVSPQL*GHVLLLLLIGIHLY Trigger: ATAAAGGTGAATTCCTATCAGAAGGAGGAGGAGTACGTGGCCCAAGAGTTGTGGAGAGACATCAGAGTCAATGCAAGGACTCAGACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GTCTATCAACTGAGCCCGGACATTGCTCTGCAGAGCTTGAATCTGTaGCGCTTTCTCTATGACTTTTCGCCTCAGGATCTCAATTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VYQLSPDIALQSLNL*RFLYDFSPQDLNSA Trigger: CGCAGAATTGAGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAATGTCCGGGCTCAGTTGATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | ACTTCTTTGACCACTTCTCGGCGACCATCAGGACCTGTGACAGTCTaGGTAATGGTTTTAGAGCATGAACGATGTGTGGTGCTTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSLTTSRRPSGPVTV*VMVLEHERCVVLVP Trigger: TGGCACAAGCACCACACATCGTTCATGCTCTAAAACCATTACCAAGACTGTCACAGGTCCTGATGGTCGCCGAGAAGTGGTCAAAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 90 bp | TCCTTCCCCTTTGTCATTCAGGCTGCCGAAACCTCTCTTGTAGTCTaGCCAGGTCCGGTTAAAATTCAGCGATCCATCCATTCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFPFVIQAAETSLVV*PGPVKIQRSIHSLL Trigger: CAGCAAAGAATGGATGGATCGCTGAATTTTAACCGGACCTGGCAAGACTACAAGAGAGGTTTCGGCAGCCTGAATGACAAAGGGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 72 bp | TCGCCTCAGGATCTCAATTCTGCGCCTCAGGTCTTCTaGCACTTGCCCATAAGTGTTATCAAAGTTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPQDLNSAPQVF*HLPISVIKVVG Trigger: GCCAACAACTTTGATAACACTTATGGGCAAGTGTCAGAAGACCTGAGGCGCAGAATTGAGATCCTGAGGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | TGCTCTGCAGAGCTTGAATCTGTTGCGCTTTCTCTATaGCTTTTCGCCTCAGGATCTCAATTCTGCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSAELESVALSL*LFASGSQFCAS Trigger: TGAGGCGCAGAATTGAGATCCTGAGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | TCTCTTCCCATTGGTCGGCATCTCTGTCAAAGGTACTaGACTGCATGTTGCTGTGTGAGGTGTATTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLPIGRHLCQRY*TACCCVRCILS Trigger: GGACAGAATACACCTCACACAGCAACATGCAGTTCAGTACCTTTGACAGAGATGCCGACCAATGGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS GCA 72 bp | AATCCTGGTTGGCTTCGTCAATCAACCCTTTCATCCTaGAGCCTGAAGGGCATTTGTGGTTCCAGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: NPGWLRQSTLSS*SLKGICGSSHH Trigger: ATGATGACTGGAACCACAAATGCCCTTCAGGCTGCAGGATGAAAGGGTTGATTGACGAAGCCAACCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | AGTCCTTGCATTGACTCTGATGTCTCTCCACAACTCTaGGGCCACGTACTCCTCCTCCTTCTGATAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: SPCIDSDVSPQL*GHVLLLLLIGI Trigger: AATTCCTATCAGAAGGAGGAGGAGTACGTGGCCCAAGAGTTGTGGAGAGACATCAGAGTCAATGCAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | GTCTATCAACTGAGCCCGGACATTGCTCTGCAGAGCTaGAATCTGTTGCGCTTTCTCTATGACTTTTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: VYQLSPDIALQS*NLLRFLYDFSP Trigger: AGGCGAAAAGTCATAGAGAAAGCGCAACAGATTCAAGCTCTGCAGAGCAATGTCCGGGCTCAGTTGATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | CCAGGTCCGGTTAAAATTCAGCGATCCATCCATTCTTaGCTGGATCAAAAGCCATCCTCCCAAACTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PGPVKIQRSIHS*LDQKPSSQTGL Trigger: GAGACCAGTTTGGGAGGATGGCTTTTGATCCAGCAAAGAATGGATGGATCGCTGAATTTTAACCGGACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 90 bp | GTAGTCTTGCCAGGTCCGGTTAAAATTCAGCGATCCATCCATTCTTaGCTGGATCAAAAGCCATCCTCCCAAACTGGTCTCTTGATCGCA | + |
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Preference number: 6 (lower is better) Translates to: VVLPGPVKIQRSIHS*LDQKPSSQTGLLIA Trigger: TGCGATCAAGAGACCAGTTTGGGAGGATGGCTTTTGATCCAGCAAAGAATGGATGGATCGCTGAATTTTAACCGGACCTGGCAAGACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS GCA 72 bp | CAGGTCCGGTTAAAATTCAGCGATCCATCCATTCTTTaGTGGATCAAAAGCCATCCTCCCAAACTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QVRLKFSDPSIL*WIKSHPPKLVS Trigger: AGAGACCAGTTTGGGAGGATGGCTTTTGATCCAGCAAAGAATGGATGGATCGCTGAATTTTAACCGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CAA 72 bp | TTTGTCATTCAGGCTGCCGAAACCTCTCTTGTAGTCTaGCCAGGTCCGGTTAAAATTCAGCGATCCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: FVIQAAETSLVV*PGPVKIQRSIH Trigger: ATGGATGGATCGCTGAATTTTAACCGGACCTGGCAAGACTACAAGAGAGGTTTCGGCAGCCTGAATGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS CCA 72 bp | CTGGATCCAGGTGGCTTGATACTGAAAATGCCATTTTaGGCACCTGAAGTTTGTGTTTGGAGGACATCATCA | + |
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Preference number: 6 (lower is better) Translates to: LDPGGLILKMPF*APEVCVWRTSS Trigger: TGATGATGTCCTCCAAACACAAACTTCAGGTGCCCAAAATGGCATTTTCAGTATCAAGCCACCTGGATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS TCA 72 bp | AGGTGGCTTGATACTGAAAATGCCATTTTGGGCACCTaGAGTTTGTGTTTGGAGGACATCATCACAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RWLDTENAILGT*SLCLEDIITVS Trigger: AGAGACTGTGATGATGTCCTCCAAACACAAACTTCAGGTGCCCAAAATGGCATTTTCAGTATCAAGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166581.4 |
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| CDS GCA 72 bp | TCGGGAACTGGAGACATTTTTAGTGCTGGCAAGTACTaGCTGTCTTTTGTAGGAAGCAATTCTTTAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: SGTGDIFSAGKY*LSFVGSNSLAM Trigger: CATCGCTAAAGAATTGCTTCCTACAAAAGACAGGCAGTACTTGCCAGCACTAAAAATGTCTCCAGTTCCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CCA 72 bp | GGGTCCTCAATGTTTGTGAGGATGTCGGAATCAGAATaGGTCTTACTGCCAAATTCTTTGAAGTTAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSSMFVRMSESE*VLLPNSLKLGE Trigger: CTCACCTAACTTCAAAGAATTTGGCAGTAAGACCCATTCTGATTCCGACATCCTCACAAACATTGAGGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS TCA 72 bp | GTCCCCTCTCAAATACTCCATGATATTCCTGGTCAGTaGGTTAGAATCCTTGTTGTTCCTTTGAAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VPSQILHDIPGQ*VRILVVPLKVK Trigger: TTTGACTTTCAAAGGAACAACAAGGATTCTAACTCACTGACCAGGAATATCATGGAGTATTTGAGAGGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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| CDS CAA 72 bp | ATGTCGGAATCAGAATGGGTCTTACTGCCAAATTCTTaGAAGTTAGGTGAGATTAAACCAAAGTGGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: MSESEWVLLPNS*KLGEIKPKWLS Trigger: TGACAACCACTTTGGTTTAATCTCACCTAACTTCAAAGAATTTGGCAGTAAGACCCATTCTGATTCCGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029630.15 ENSMUST00000166581.4 |
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