Pregenerated sensors for FBXO8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038206Ensembl transcript IDs: ENSMUST00000040218.13, ENSMUST00000110322.9
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAGCTCCTTGCTTGCCCATAGGAACCCTGCTTCGTTGATTCTGTaGACCATGTTCTCTTGGTGTCACTCTTCTGATAGGACCTGGATG | + |
|
Preference number: 1 (lower is better) Translates to: ASSLLAHRNPASLIL*TMFSWCHSSDRTWM Trigger: CATCCAGGTCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGCAGGGTTCCTATGGGCAAGCAAGGAGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR TCA 90 bp | AGCTCCATGCAAGCTCCTTGCTTGCCCATAGGAACCCTGCTTCGTTaGTTCTGTGGACCATGTTCTCTTGGTGTCACTCTTCTGATAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SSMQAPCLPIGTLLR*FCGPCSLGVTLLIG Trigger: TCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGCAGGGTTCCTATGGGCAAGCAAGGAGCTTGCATGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR CCA 90 bp | TGTGGACCATGTTCTCTTGGTGTCACTCTTCTGATAGGACCTGGATaGAGAACTCCAAGTAAGACTCTCTCTGTGTATAACACCCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: CGPCSLGVTLLIGPG*RTPSKTLSVYNTQL Trigger: CAGCTGGGTGTTATACACAGAGAGAGTCTTACTTGGAGTTCTCCATCCAGGTCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR TCA 90 bp | TGCTGCCAGAGGAAGCCTCTGATGATAACTGGACAAGGAAGGCCCTaGTCTGAGTATAACCAGAGTGCCATTAGGAATCATCTCATTGAT | + |
|
Preference number: 1 (lower is better) Translates to: CCQRKPLMITGQGRP*SEYNQSAIRNHLID Trigger: ATCAATGAGATGATTCCTAATGGCACTCTGGTTATACTCAGATCAGGGCCTTCCTTGTCCAGTTATCATCAGAGGCTTCCTCTGGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGGAGATTTCAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTACAGGCTGGACTGGAGTaGCCAGTGCTGATGCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: GGRFQVVTQIATEKRSGVQAGLE*PVLMQP Trigger: GGGTTGCATCAGCACTGGTCACTCCAGTCCAGCCTG...TACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTGAAATCTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR CAA 90 bp | CAGCTCCATGCAAGCTCCTTGCTTGCCCATAGGAACCCTGCTTCGTaGATTCTGTGGACCATGTTCTCTTGGTGTCACTCTTCTGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: QLHASSLLAHRNPAS*ILWTMFSWCHSSDR Trigger: CCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGCAGGGTTCCTATGGGCAAGCAAGGAGCTTGCATGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATTGGAGTGACCAGTGCTaGTGCAACCCTGCTGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: GKLVLVSRVRSNFDKANNWSDQC*CNPAAT Trigger: AGTGGCAGCAGGGTTGCATCAGCACTGGTCACTCCA...ATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTAGACAGAGGGAGAAGCATGTGCCATCTCTaGATGCAGAACTCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QVVTQIATEKRSGVDRGRSMCHL*MQNSCP Trigger: TGGACATGAGTTCTGCATTCAGAGATGGCACATGCT...TCTCCCTCTGTCTACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCGTTGATTCTGTGGACCATGTTCTCTTGGTGTCACTCTTCTGATAGGACCTTGTTTTGTCCTATTTaGCTGTGGACTCTTGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASLILWTMFSWCHSSDRTLFCPI*LWTLGG Trigger: GCCTCCAAGAGTCCACAGCCAAATAGGACAAAACAA...GGTCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCATGGAGTGACCAGTGCTaGTGCAACCCTGCTGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSNFDKANNILSSKSWSDQC*CNPAAT Trigger: AGTGGCAGCAGGGTTGCATCAGCACTGGTCACTCCA...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGGAGATTTCAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTACAAAGTTCAGAGAAATaGGAAGCTGGTATTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GGRFQVVTQIATEKRSGVQSSEK*EAGIGF Trigger: GAAACCAATACCAGCTTCCCATTTCTCTGAACTTTG...TACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTGAAATCTCCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGAGAGAAATGGGAAGCTaGTATTGGTTTCTAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: KFREMGSWYWFLGSDPTLREMGS*YWFLGS Trigger: TGACCCTAGAAACCAATACCAGCTTCCCATTTCTCT...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGTCTGGAGTAAAAAGTTaGAGTTCGAACACTTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KFREMGSWYWFLGSDPTLSGVKS*SSNTCA Trigger: AGCACAAGTGTTCGAACTTCAACTTTTTACTCCAGA...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGGGAAACTGTGTTTGGGATGCAGTGTGTGAGAGACAAATCTATTTCAATATGGGTAGCCTCAGTCTaGAGTAAAAAGTTGAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: EGETVFGMQCVRDKSISIWVASV*SKKLKF Trigger: GAACTTCAACTTTTTACTCCAGACTGAGGCTACCCA...TATTGAAATAGATTTGTCTCTCACACACTGCATCCCAAACACAGTTTCCCCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAATTTTACACACAGGCTaGACTGGAGTGACCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSNFDKANNILSSKSILHTG*TGVTSA Trigger: AGCACTGGTCACTCCAGTCCAGCCTGTGTGTAAAAT...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAATTTTACACACAGGCTaGACTGGAGTGACCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQILHTG*TGVTSA Trigger: AGCACTGGTCACTCCAGTCCAGCCTGTGTGTAAAAT...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACACAGTGGCTGTTTTGTaGAAACATGATGAGCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: FKVQRNGKLVLVSRVRSNTVAVL*KHDEQI Trigger: AATTTGCTCATCATGTTTGCACAAAACAGCCACTGT...GTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR CAA 90 bp | GATCTGAGTATAACCAGAGTGCCATTAGGAATCATCTCATTGATTTaGTTTTTCTTCCCCAAGTCATACTTGGTTCTCTCACATAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DLSITRVPLGIISLI*FFFPKSYLVLSHSA Trigger: AGCACTATGTGAGAGAACCAAGTATGACTTGGGGAAGAAAAACAAAATCAATGAGATGATTCCTAATGGCACTCTGGTTATACTCAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR GCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAACACTTGTGCTTTTATaGAGCCACATGGCCAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSNFDKANNILSSKSTLVLL*SHMANK Trigger: CTTATTGGCCATGTGGCTGCATAAAAGCACAAGTGT...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110322.9 |
||
| 3UTR-3UTR CCA 90 bp | TATAGAGCATATGTCAGTTTAACATTCTCTAACAGTTGTGTTAGACAGTGGCTGTGGGTAGCCTCAGTCTaGAGTAAAAAGTTGAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: YRAYVSLTFSNSCVRQWLWVASV*SKKLKF Trigger: GAACTTCAACTTTTTACTCCAGACTGAGGCTACCCA...CAGCCACTGTCTAACACAACTGTTAGAGAATGTTAAACTGACATATGCTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCATCTGGAGTAAAAAGTTaGAGTTCGAACACTTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSNFDKANNILSSKSSGVKS*SSNTCA Trigger: AGCACAAGTGTTCGAACTTCAACTTTTTACTCCAGA...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAGGTCAGATCCAACTTTaGCAAAGCCAACAATATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSNFDKANNILSSKSGQIQL*QSQQYS Trigger: AGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACC...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAATTTTATTCTTCACATaGGGACTAGTGAGGTCAATG | + |
|
Preference number: 2 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQILFFT*GLVRSM Trigger: CATTGACCTCACTAGTCCTCATGTGAAGAATAAAAT...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110322.9 |
||
| 3UTR-3UTR GCA 90 bp | ACATTACATGGTATTTGTAAAAGGATGGAAATGGATAGTTCCCAGACCAATCTAACAGTGGCTGTTTTGTaGAAACATGATGAGCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: TLHGICKRMEMDSSQTNLTVAVL*KHDEQI Trigger: AATTTGCTCATCATGTTTGCACAAAACAGCCACTGT...TAGATTGGTCTGGGAACTATCCATTTCCATCCTTTTACAAATACCATGTAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR GCA 72 bp | CACCCAGCTGTGGGGCTTAGCACCACTCCCTTATGCTaGCAGAGGAAGCCTCTGATGATAACTGGACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HPAVGLSTTPLC*QRKPLMITGQG Trigger: TCCTTGTCCAGTTATCATCAGAGGCTTCCTCTGGCAGCATAAGGGAGTGGTGCTAAGCCCCACAGCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR CCA 72 bp | AACCCTGCTTCGTTGATTCTGTGGACCATGTTCTCTTaGTGTCACTCTTCTGATAGGACCTGGATGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NPASLILWTMFS*CHSSDRTWMEN Trigger: GTTCTCCATCCAGGTCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGCAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR CCA 72 bp | TTGCTTGCCCATAGGAACCCTGCTTCGTTGATTCTGTaGACCATGTTCTCTTGGTGTCACTCTTCTGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLAHRNPASLIL*TMFSWCHSSDR Trigger: CCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGCAGGGTTCCTATGGGCAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTAACATCCATGTATATATGCAGAGGATTGGCTCAGCTCCATGCAAGCTCCTTTGTTTTGTCCTATTaGGCTGTGGACTCTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLTSMYICRGLAQLHASSFVLSY*AVDSWR Trigger: CCTCCAAGAGTCCACAGCCAAATAGGACAAAACAAA...GGAGCTTGCATGGAGCTGAGCCAATCCTCTGCATATATACATGGATGTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTAACATCCATGTATATATGCAGAGGATTGGCTCAGCTCCATGCAAGCTCCTTCCCCAAGTCATACTaGGTTCTCTCACATAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLTSMYICRGLAQLHASSFPKSY*VLSHSA Trigger: AGCACTATGTGAGAGAACCAAGTATGACTTGGGGAA...GGAGCTTGCATGGAGCTGAGCCAATCCTCTGCATATATACATGGATGTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR TCA 72 bp | CAGTTTCCCCCTTATTACACAAGCATGTGCCATCTCTaGATGCAGAACTCATGTCCAGGTACCAGTACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QFPPYYTSMCHL*MQNSCPGTSTV Trigger: TACAGTACTGGTACCTGGACATGAGTTCTGCATTCAGAGATGGCACATGCTTGTGTAATAAGGGGGAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR CCA 72 bp | TGTTCTCTTGGTGTCACTCTTCTGATAGGACCTGGATaGAGAACTCCAAGTAAGACTCTCTCTGTGTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSLGVTLLIGPG*RTPSKTLSVYN Trigger: GTTATACACAGAGAGAGTCTTACTTGGAGTTCTCCATCCAGGTCCTATCAGAAGAGTGACACCAAGAGAACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACGTCTGGAGTAAAAAGTaGAAGTTCGAACACTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FKVQRNGKLVLVSRVRSNVWSKK*KFEHLC Trigger: GCACAAGTGTTCGAACTTCAACTTTTTACTCCAGAC...GTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGGGGTCAGATCCAACTTaGACAAAGCCAACAATATTC | + |
|
Preference number: 3 (lower is better) Translates to: KFREMGSWYWFLGSDPTLGSDPT*TKPTIF Trigger: GAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCC...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGGTCTGGAGTAAAAAGTaGAAGTTCGAACACTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSRVRSNFDKANNILSSKVWSKK*KFEHLC Trigger: GCACAAGTGTTCGAACTTCAACTTTTTACTCCAGAC...CTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAGAGCATATGTCAGTTTAACATTCTCTAACAGTTGTGTTAGACAGTGGCTGTTGAAGTTCGAACACTaGTGCTTTTATGCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: YRAYVSLTFSNSCVRQWLLKFEH*CFYAAT Trigger: TGTGGCTGCATAAAAGCACAAGTGTTCGAACTTCAA...CAGCCACTGTCTAACACAACTGTTAGAGAATGTTAAACTGACATATGCTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGATTTCAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTAGGCCAAGTTCTCGCATaGGGTCAGGATTGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRFQVVTQIATEKRSGVGQVLA*GQDCKH Trigger: GTGCTTGCAATCCTGACCTCATGCGAGAACTTGGCC...TACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTGAAATCTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTAGACAGAGGGAGAATATCAATGCCTCCTTaGGCTTGTTTCCGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVVTQIATEKRSGVDRGRISMPP*ACFRWL Trigger: CAGCCACCGGAAACAAGCCCAAGGAGGCATTGATAT...TCTCCCTCTGTCTACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | GGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATGCTTCCTGTTGGAGATaGTGGTTTCTGGCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLVLVSRVRSNFDKANNASCWR*WFLATL Trigger: GAGAGTGGCCAGAAACCATCATCTCCAACAGGAAGC...ATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGTGCTCTGTTCTCTGCTaGGGTAGCCTGTCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFREMGSWYWFLGSDPTLCSVLC*GSLSHC Trigger: ACAGTGAGACAGGCTACCTCAGCAGAGAACAGAGCA...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTAGACAGAGGGAGATTGTATATAGAGCAGTaGCCCCATGTAGATTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: QVVTQIATEKRSGVDRGRLYIEQ*PHVDLH Trigger: GTGTAAATCTACATGGGGTCACTGCTCTATATACAA...TCTCCCTCTGTCTACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTAACATCCATGTATATATGCAGAGGATTGGCTCAGCTCCATGCAAGCTCCTCATTAGCGAGGTCTTaGCAAACACAGGAAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLTSMYICRGLAQLHASSSLARS*QTQEAK Trigger: CTTAGCTTCCTGTGTTTGGCAAGACCTCGCTAATGA...GGAGCTTGCATGGAGCTGAGCCAATCCTCTGCATATATACATGGATGTTAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | GAAGGGGAAACTGTGTTTGGGATGCAGTGTGTGAGAGACAAATCTATTTCAATAGTGAGAAATGTTGCTTaGAGCCACTCTCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGETVFGMQCVRDKSISIVRNVA*SHSPAL Trigger: CAGAGCAGGAGAGTGGCTTCAAGCAACATTTCTCAC...TATTGAAATAGATTTGTCTCTCACACACTGCATCCCAAACACAGTTTCCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGTAACACAGATAGCTACAGAAAAGAGGTCGGGAGTAGACAGAGGGAGAATTTTATTCTTCACATaGGGACTAGTGAGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QVVTQIATEKRSGVDRGRILFFT*GLVRSM Trigger: CATTGACCTCACTAGTCCTCATGTGAAGAATAAAAT...TCTCCCTCTGTCTACTCCCGACCTCTTTTCTGTAGCTATCTGTGTTACCACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTAACATCCATGTATATATGCAGAGGATTGGCTCAGCTCCATGCAAGCTCCGATGATAGATATCAATaGCTCCTTGGGCTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTSMYICRGLAQLHASSDDRYQ*LLGLVS Trigger: GGAAACAAGCCCAAGGAGGCATTGATATCTATCATC...GGAGCTTGCATGGAGCTGAGCCAATCCTCTGCATATATACATGGATGTTAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGAAACTGTGTTTGGGATGCAGTGTGTGAGAGACAAATCTATTTCAATAGGAGATGATGGTTTCTaGCCACTCTCCAGAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGETVFGMQCVRDKSISIGDDGF*PLSRVL Trigger: AAGGACTCTGGAGAGTGGCCAGAAACCATCATCTCC...TATTGAAATAGATTTGTCTCTCACACACTGCATCCCAAACACAGTTTCCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCATATGTCAGTTTAACATTCTCTAACAGTTGTGTTAGACAGTGGCTGGCTTCCTGTTGGAGATaGTGGTTTCTGGCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRAYVSLTFSNSCVRQWLASCWR*WFLATL Trigger: GAGAGTGGCCAGAAACCATCATCTCCAACAGGAAGC...CAGCCACTGTCTAACACAACTGTTAGAGAATGTTAAACTGACATATGCTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAATGCTCTGTTCTCTGCTaGGGTAGCCTGTCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQCSVLC*GSLSHC Trigger: ACAGTGAGACAGGCTACCTCAGCAGAGAACAGAGCA...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAATTCCGGTGGCTGGTGTaGGAAATGTTGCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQFRWLV*EMLLEA Trigger: GGCTTCAAGCAACATTTCTCACACCAGCCACCGGAA...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGGCTCACTCCCTCCTCTaGGTTGGCATTAAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSRVRSNFDKANNILSSKAHSLL*VGIKGE Trigger: CTCACCTTTAATGCCAACCCAGAGGAGGGAGTGAGC...CTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | ACATTACATGGTATTTGTAAAAGGATGGAAATGGATAGTTCCCAGACCAATCTATTCCGGTGGCTGGTGTaGGAAATGTTGCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHGICKRMEMDSSQTNLFRWLV*EMLLEA Trigger: GGCTTCAAGCAACATTTCTCACACCAGCCACCGGAA...TAGATTGGTCTGGGAACTATCCATTTCCATCCTTTTACAAATACCATGTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGGATGATAGATATCAATaGCTCCTTGGGCTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFREMGSWYWFLGSDPTLDDRYQ*LLGLVS Trigger: GGAAACAAGCCCAAGGAGGCATTGATATCTATCATC...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAATATCAATGCCTCCTTaGGCTTGTTTCCGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVRSNFDKANNILSSKSISMPP*ACFRWL Trigger: CAGCCACCGGAAACAAGCCCAAGGAGGCATTGATAT...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGTTGTATATAGAGCAGTaGCCCCATGTAGATTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KFREMGSWYWFLGSDPTLLYIEQ*PHVDLH Trigger: GTGTAAATCTACATGGGGTCACTGCTCTATATACAA...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CCA 90 bp | ACATTACATGGTATTTGTAAAAGGATGGAAATGGATAGTTCCCAGACCAATCTAGGAGATGATGGTTTCTaGCCACTCTCCAGAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLHGICKRMEMDSSQTNLGDDGF*PLSRVL Trigger: AAGGACTCTGGAGAGTGGCCAGAAACCATCATCTCC...TAGATTGGTCTGGGAACTATCCATTTCCATCCTTTTACAAATACCATGTAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAAGACAGCATCTCCTCTaGGTTGGCATTAAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQRQHLL*VGIKGE Trigger: CTCACCTTTAATGCCAACCCAGAGGAGATGCTGTCT...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110322.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACGCATTCGGCAAGAACTaGTTTCTAAAATTATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKVQRNGKLVLVSRVRSNAFGKN*FLKLCK Trigger: CTTGCATAATTTTAGAAATCAGTTCTTGCCGAATGC...GTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR TCA 90 bp | GAAGGGGAAACTGTGTTTGGGATGCAGTGTGTGAGAGACAAATCTATTTCAATAAGCACAGAACCTATGTaGGAACTTGGTTATAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGETVFGMQCVRDKSISISTEPM*ELGYKS Trigger: ACTCTTATAACCAAGTTCTCACATAGGTTCTGTGCT...TATTGAAATAGATTTGTCTCTCACACACTGCATCCCAAACACAGTTTCCCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGGATTTACACAACCCTTaGCAGAGAAGTTCATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KFREMGSWYWFLGSDPTLDLHNP*QRSSSL Trigger: TAATGATGAACTTCTCTGGCAAGGGTTGTGTAAATC...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTCTTTAGACTTCCTTaGCTTCAGAAGATGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKVQRNGKLVLVSRVRSNFFRLP*LQKMID Trigger: ATCTATCATCTTCTGAAGGCAAGGAAGTCTAAAGAA...GTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| 3UTR CAA 72 bp | GGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTaGACAAAGCCAACAATATTCTTAGTTCAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSWYWFLGSDPT*TKPTIFLVQSQ Trigger: TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR GCA 90 bp | TATAGAGCATATGTCAGTTTAACATTCTCTAACAGTTGTGTTAGACAGTGGCTGGATTTACACAACCCTTaGCAGAGAAGTTCATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: YRAYVSLTFSNSCVRQWLDLHNP*QRSSSL Trigger: TAATGATGAACTTCTCTGGCAAGGGTTGTGTAAATC...CAGCCACTGTCTAACACAACTGTTAGAGAATGTTAAACTGACATATGCTCTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCATTCTTTAGACTTCCTTaGCTTCAGAAGATGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVRSNFDKANNILSSKSFFRLP*LQKMID Trigger: ATCTATCATCTTCTGAAGGCAAGGAAGTCTAAAGAA...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCGTTGATTCTGTGGACCATGTTCTCTTGGTGTCACTCTTCTGATAGGACCAATGCCTCCTTGGGCTaGTTTCCGGTGGCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLILWTMFSWCHSSDRTNASLG*FPVAGV Trigger: CACACCAGCCACCGGAAACAAGCCCAAGGAGGCATT...GGTCCTATCAGAAGAGTGACACCAAGAGAACATGGTCCACAGAATCAACGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS TCA 90 bp | GCCAAGTTCTCGCATGAGGTCAGGATTGCAAGCACAGAACCTATGTaGGAACTTGGTTATAAGAGTTTCAAGGTACTCCCCACGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKFSHEVRIASTEPM*ELGYKSFKVLPTLF Trigger: GAAGAGCGTGGGGAGTACCTTGAAACTCTTATAACCAAGTTCTCACATAGGTTCTGTGCTTGCAATCCTGACCTCATGCGAGAACTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CAA 90 bp | GGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATACTCCCTCCTCTGGGTaGGCATTAAAGGTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKLVLVSRVRSNFDKANNTPSSG*ALKVRL Trigger: AAGCCTCACCTTTAATGCCAACCCAGAGGAGGGAGT...ATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CAA 90 bp | GGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATTGTGAGAAATGTTGCTaGAAGCCACTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKLVLVSRVRSNFDKANNCEKCC*KPLSCS Trigger: AGAGCAGGAGAGTGGCTTCAAGCAACATTTCTCACA...ATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGAATGCCTCCTTGGGCTaGTTTCCGGTGGCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRVRSNFDKANNILSSKNASLG*FPVAGV Trigger: CACACCAGCCACCGGAAACAAGCCCAAGGAGGCATT...CTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGAAACTGTGTTTGGGATGCAGTGTGTGAGAGACAAATCTATTTCAATACGCATGAGGTCAGGATaGCAAGCACAGAACCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: EGETVFGMQCVRDKSISIRMRSG*QAQNLC Trigger: ACATAGGTTCTGTGCTTGCAATCCTGACCTCATGCG...TATTGAAATAGATTTGTCTCTCACACACTGCATCCCAAACACAGTTTCCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAGATATCAATGCCTCCTaGGGCTTGTTTCCGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQDINAS*GLFPVA Trigger: AGCCACCGGAAACAAGCCCAAGGAGGCATTGATATC...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAAGCATCTCCTCTGGGTaGGCATTAAAGGTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSDPTLTKPTIFLVQSQSISSG*ALKVRL Trigger: AAGCCTCACCTTTAATGCCAACCCAGAGGAGATGCT...TTGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTGTGAGAAATGTTGCTaGAAGCCACTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSRVRSNFDKANNILSSKCEKCC*KPLSCS Trigger: AGAGCAGGAGAGTGGCTTCAAGCAACATTTCTCACA...CTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACTTTGAGATTTACACAACCCTaGCCAGAGAAGTTCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: KFREMGSWYWFLGSDPTLRFTQP*PEKFII Trigger: AATGATGAACTTCTCTGGCAAGGGTTGTGTAAATCT...CAAAGTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGTTCAGAGAAATGGGAAGCTGGTATTGGTTTCTAGGGTCAGATCCAACATTTTGCTATTTCCTTaGGCGAATCATCTAGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: FKVQRNGKLVLVSRVRSNILLFP*ANHLGY Trigger: GTATCCTAGATGATTCGCCAAAGGAAATAGCAAAAT...GTTGGATCTGACCCTAGAAACCAATACCAGCTTCCCATTTCTCTGAACTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS-3UTR CAA 90 bp | ACATTACATGGTATTTGTAAAAGGATGGAAATGGATAGTTCCCAGACCAATCTAAGATTTACACAACCCTaGCCAGAGAAGTTCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLHGICKRMEMDSSQTNLRFTQP*PEKFII Trigger: AATGATGAACTTCTCTGGCAAGGGTTGTGTAAATCT...TAGATTGGTCTGGGAACTATCCATTTCCATCCTTTTACAAATACCATGTAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS-3UTR CAA 90 bp | TCTAGGGTCAGATCCAACTTTGACAAAGCCAACAATATTCTTAGTTCAAAGTCAAACCTATGTGAGAACTaGGTTATAAGAGTTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRVRSNFDKANNILSSKSNLCEN*VIRVSR Trigger: CCTTGAAACTCTTATAACCAAGTTCTCACATAGGTT...TGACTTTGAACTAAGAATATTGTTGGCTTTGTCAAAGTTGGATCTGACCCTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS CAA 90 bp | GCTCTGTTCTCTGCTGAGGTAGCCTGTCTCACTGTAGGCTTCCTGTaGGAGATGATGGTTTCTGGCCACTCTCCAGAGTCCTTGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ALFSAEVACLTVGFL*EMMVSGHSPESLTH Trigger: ATGGGTCAAGGACTCTGGAGAGTGGCCAGAAACCATCATCTCCAACAGGAAGCCTACAGTGAGACAGGCTACCTCAGCAGAGAACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS CAA 90 bp | TCTCGCATGAGGTCAGGATTGCAAGCACAGAACCTATGTGAGAACTaGGTTATAAGAGTTTCAAGGTACTCCCCACGCTCTTCAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRMRSGLQAQNLCEN*VIRVSRYSPRSSGA Trigger: TGCCCCTGAAGAGCGTGGGGAGTACCTTGAAACTCTTATAACCAAGTTCTCACATAGGTTCTGTGCTTGCAATCCTGACCTCATGCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS CAA 72 bp | CCTTGCCTTCAGAAGATGATAGATATCAATGCCTCCTaGGGCTTGTTTCCGGTGGCTGGTGTGAGAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: PCLQKMIDINAS*GLFPVAGVRNV Trigger: AACATTTCTCACACCAGCCACCGGAAACAAGCCCAAGGAGGCATTGATATCTATCATCTTCTGAAGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||
| CDS TCA 72 bp | TCGCATGAGGTCAGGATTGCAAGCACAGAACCTATGTaGGAACTTGGTTATAAGAGTTTCAAGGTACTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHEVRIASTEPM*ELGYKSFKVLP Trigger: GGGGAGTACCTTGAAACTCTTATAACCAAGTTCTCACATAGGTTCTGTGCTTGCAATCCTGACCTCATGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS CAA 72 bp | AGGTCAGGATTGCAAGCACAGAACCTATGTGAGAACTaGGTTATAAGAGTTTCAAGGTACTCCCCACGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSGLQAQNLCEN*VIRVSRYSPRS Trigger: AGAGCGTGGGGAGTACCTTGAAACTCTTATAACCAAGTTCTCACATAGGTTCTGTGCTTGCAATCCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040218.13 |
||
| CDS TCA 72 bp | AATCCTAAAGGTGGGTTCTTATTGTATATAGAGCAGTaGCCCCATGTAGATTTACACAACCCTTGCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NPKGGFLLYIEQ*PHVDLHNPCQR Trigger: TCTCTGGCAAGGGTTGTGTAAATCTACATGGGGTCACTGCTCTATATACAATAAGAACCCACCTTTAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040218.13 ENSMUST00000110322.9 |
||