Pregenerated sensors for FBXL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040410Ensembl transcript IDs: ENSMUST00000039234.10, ENSMUST00000184455.8, ENSMUST00000184582.2, ENSMUST00000185029.8
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTCTaGAGGGTGGGGCACCAGCCAAGGTCAAGTTCCTCAAGAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: FGSWRASLTKHPVLL*RVGHQPRSSSSRRT Trigger: TGTTCTTCTTGAGGAACTTGACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR CCA 90 bp | AGTGACGTGTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCACAGCAATGCTGGTGGAGAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SDVSSSRAQYGCRLR*IYCRGSQQCWWRSL Trigger: CAGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 90 bp | ACTCCAGTGACGTGTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTTaGGGTGGATATATTGCAGAGGATCACAGCAATGCTGGTGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: TPVTCRPAGPSMAAG*GGYIAEDHSNAGGE Trigger: TTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR GCA 90 bp | TGTAGGAACTCCAGTGACGTGTCGTCCAGCCGGGCCCAGTATGGCTaGAGGTTGAGGTGGATATATTGCAGAGGATCACAGCAATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CRNSSDVSSSRAQYG*RLRWIYCRGSQQCW Trigger: CCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACTGGAGTTCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 90 bp | ACAGAGATGAACCCTCTGTTGCCAGTCCAAGACAGATTAAGCCACTaGACAAGCACACAGCGAGCCTGTAGGAACTCCAGTGACGTGTCG | + |
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Preference number: 1 (lower is better) Translates to: TEMNPLLPVQDRLSH*TSTQRACRNSSDVS Trigger: CGACACGTCACTGGAGTTCCTACAGGCTCGCTGTGTGCTTGTCCAGTGGCTTAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 90 bp | GTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTTaGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VTHRPVSCKKEFLQV*ELACQSDKAPSAAL Trigger: CAGAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR GCA 90 bp | ATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTaGAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: MSVSHTDLLAVRKSF*KFGSWRASLTKHPV Trigger: CACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR CCA 90 bp | TCAAGCAGCTGGTCTGTTGTCATAGAAACTGCCATCGAGGGCCACTaGGATCCTTTAGAAGAGCTACTAGAGGGCTCCAAAGAAGACTAC | + |
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Preference number: 1 (lower is better) Translates to: SSSWSVVIETAIEGH*DPLEELLEGSKEDY Trigger: GTAGTCTTCTTTGGAGCCCTCTAGTAGCTCTTCTAAAGGATCCCAGTGGCCCTCGATGGCAGTTTCTATGACAACAGACCAGCTGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR TCA 90 bp | GTAGTGCTGTTTGCTCTACTTTTGTCCGATAGAGAACAAGCCTCTTaGGGCTGCATAACTTGGCAATATGGCCAAAAGCCTGAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VVLFALLLSDREQAS*GCITWQYGQKPEVG Trigger: TCCCACCTCAGGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAAGAGGCTTGTTCTCTATCGGACAAAAGTAGAGCAAACAGCACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 90 bp | CAAGAAGAACACAGCCAGAAGCCAACTCTGCTATCCCATTCTCGGTaGTATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: QEEHSQKPTLLSHSR*YSCISTDPKSAGFY Trigger: GTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTGGCTTCTGGCTGTGTTCTTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR TCA 90 bp | TGGCTATCACATCATAATCTTCAATCATCACACAGCTGCCCAGGCTaGGGTGCTGAAGCTCTGCACAGAAGTTCAAAATGCTCAGTAGTG | + |
|
Preference number: 1 (lower is better) Translates to: WLSHHNLQSSHSCPG*GAEALHRSSKCSVV Trigger: CACTACTGAGCATTTTGAACTTCTGTGCAGAGCTTCAGCACCTCAGCCTGGGCAGCTGTGTGATGATTGAAGATTATGATGTGATAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 90 bp | GGGCACATTTCAGAAATAACCTCCAAGCAAGTGTCATTAAGAAAGTaGCTGCAGGATAACTCAAGGCGTACTAACTCAGACCCACACACC | + |
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Preference number: 1 (lower is better) Translates to: GHISEITSKQVSLRK*LQDNSRRTNSDPHT Trigger: GGTGTGTGGGTCTGAGTTAGTACGCCTTGAGTTATCCTGCAGCCACTTTCTTAATGACACTTGCTTGGAGGTTATTTCTGAAATGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 90 bp | ACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCATGCTaGCTATCACATCATAATCTTCAATCATCACACAGCTGCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TDPKSAGFYTWLLSC*LSHHNLQSSHSCPG Trigger: GCCTGGGCAGCTGTGTGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 90 bp | ACAAGCCTCTTGAGGCTGCATAACTTGGCAATATGGCCAAAAGCCTaGGGTGGGAGTTTATCGCAGGATGAGAGATTTAAGTCTTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TSLLRLHNLAIWPKA*GGSLSQDERFKSCR Trigger: TCTACAAGACTTAAATCTCTCATCCTGCGATAAACTCCCACCTCAGGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAAGAGGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR GCA 90 bp | TCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCATaGTGGCTATCACATCATAATCTTCAATCATCACACAGCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: STDPKSAGFYTWLLS*WLSHHNLQSSHSCP Trigger: TGGGCAGCTGTGTGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 90 bp | TTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTaGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: FGKLALSSNTALLSI*EQKDTSSRERSLQD Trigger: ATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| 3UTR GCA 90 bp | TATCAATCTGGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTaGAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTC | + |
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Preference number: 1 (lower is better) Translates to: YQSGNRRTRQVGKDL*KIPGVFSRMLDLPF Trigger: GAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| 3UTR CCA 90 bp | TATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTaGCTCCTATCATGCTGGCTATCACATCATAATCTTCAATCATCA | + |
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Preference number: 1 (lower is better) Translates to: YSCISTDPKSAGFYT*LLSCWLSHHNLQSS Trigger: TGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CAA 90 bp | GTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTTGAGGTGGATATATaGCAGAGGATCACAGCAATGCTGGTGGAGAAGCCTGCAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VVQPGPVWLQVEVDI*QRITAMLVEKPASL Trigger: CAGACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CAA 90 bp | AACTCCAGTGACGTGTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTaGAGGTGGATATATTGCAGAGGATCACAGCAATGCTGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NSSDVSSSRAQYGCR*RWIYCRGSQQCWWR Trigger: TCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACTGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTCAATACCAGATTTCTCTaGCTGTTCTCATTTAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FCKFGSWRASLTKHPVLLNTRFL*LFSFRA Trigger: GGCCCTAAATGAGAACAGTCAGAGAAATCTGGTATT...GAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTGCTGCTCTGAAGGGTaGGGCACCAGCCAAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: MKTFGKLALSSNTALLSICCSEG*GTSQGQ Trigger: TTGACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCA...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | ACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCAGCCGGGCCCAGTATaGCTGCAGGTTGAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: TRQVGKDLCKIPGVFSRMQPGPV*LQVEVD Trigger: ATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTG...CATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTAGTTTGGGAGCTGGCGTaGCAGTCTGACAAAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: CKIPGVFSRMLDLPFLFLVWELA*QSDKAP Trigger: GGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAAC...TAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR CAA 90 bp | ACACAGCCAGAAGCCAACTCTGCTATCCCATTCTCGGTGATATTCTaGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TQPEANSAIPFSVIF*HLHRSKVRRFLHLA Trigger: AGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTGGCTTCTGGCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCTCTGGGTGTGATATCTaGCCAACAGCAAACCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLHLHRSKVRRFLHLAPISGCDI*PTANQL Trigger: CAGCTGGTTTGCTGTTGGGCAGATATCACACCCAGA...GATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCGGATCACAGCAATGCTaGTGGAGAAGCCTGCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: MKTFGKLALSSNTALLSIGSQQC*WRSLQV Trigger: GACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCC...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CAA 90 bp | ACCTTTAGAAACCTGCTAAATCCTGATACAGAGATGAACCCTCTGTaGCCAGTCCAAGACAGATTAAGCCACTGGACAAGCACACAGCGA | + |
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Preference number: 2 (lower is better) Translates to: TFRNLLNPDTEMNPL*PVQDRLSHWTSTQR Trigger: TCGCTGTGTGCTTGTCCAGTGGCTTAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTTTCTAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTGCTATCCCATTCTCGGTGATATTCTTGCATCTCCACAGATCCAAAGTTGTTGTCATAGAAACTaGCATCGAGGGCCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: QLCYPILGDILASPQIQSCCHRN*HRGPLG Trigger: TCCCAGTGGCCCTCGATGGCAGTTTCTATGACAACA...ACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCGGTAAAGCTCACCCATaGGGACAAAGAGAAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: MKTFGKLALSSNTALLSIGKAHP*GQREAS Trigger: GCTTGCTTCTCTTTGTCCCCATGGGTGAGCTTTACC...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: MKTFGKLALSSNTALLSIGCRLR*IYCRGS Trigger: TGATCCTCTGCAATATATCCACCTCAACCTGCAGCC...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CAA 90 bp | TTTATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTaGTTATCAATCTGGGAACAGAAGGACACGTCAAGTAGGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: FMKTFGKLALSSNTA*LSIWEQKDTSSRER Trigger: TCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTACTGACCCAGGAAACTaGAACTGTTTGGGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: YVCVTHRPVSCKKEFLQVTDPGN*NCLGPC Trigger: GCATGGACCCAAACAGTTCCAGTTTCCTGGGTCAGT...AACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR CAA 90 bp | TTATCAATCTGGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTaGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATT | + |
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Preference number: 2 (lower is better) Translates to: LSIWEQKDTSSRERS*QDSRSFLKDAGLTI Trigger: AATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTAAACCTGCTAAATCCTaGTACAGAGATGAACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YVCVTHRPVSCKKEFLQVKPAKS*YRDEPS Trigger: AGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTTT...AACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 72 bp | TGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTCTaGAGGGTGGGGCACCAGCCAAGGTCAAGTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: WRASLTKHPVLL*RVGHQPRSSSS Trigger: TGAGGAACTTGACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR GCA 72 bp | TCCAGTGACGTGTCGTCCAGCCGGGCCCAGTATGGCTaGAGGTTGAGGTGGATATATTGCAGAGGATCACAG | + |
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Preference number: 3 (lower is better) Translates to: SSDVSSSRAQYG*RLRWIYCRGSQ Trigger: CTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 72 bp | TCGTCCAGCCGGGCCCAGTATGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCACAGCAATGCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SSSRAQYGCRLR*IYCRGSQQCWW Trigger: CCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 72 bp | ACGTGTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTTaGGGTGGATATATTGCAGAGGATCACAGCAATGCT | + |
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Preference number: 3 (lower is better) Translates to: TCRPAGPSMAAG*GGYIAEDHSNA Trigger: AGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR CCA 72 bp | AACCCTCTGTTGCCAGTCCAAGACAGATTAAGCCACTaGACAAGCACACAGCGAGCCTGTAGGAACTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: NPLLPVQDRLSH*TSTQRACRNSS Trigger: ACTGGAGTTCCTACAGGCTCGCTGTGTGCTTGTCCAGTGGCTTAATCTGTCTTGGACTGGCAACAGAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR-3UTR CAA 90 bp | AGTTTCTGCAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTGTTTGCTCTACTTTaGTCCGATAGAGAACAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SFCKFGSWRASLTKHPVLLFALL*SDREQA Trigger: GGCTTGTTCTCTATCGGACAAAAGTAGAGCAAACAG...CAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
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| 3UTR TCA 72 bp | CACAGCCAGAAGCCAACTCTGCTATCCCATTCTCGGTaGTATTCTTGCATCTCCACAGATCCAAAGTCCGCA | + |
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Preference number: 3 (lower is better) Translates to: HSQKPTLLSHSR*YSCISTDPKSA Trigger: TGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTGGCTTCTGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR GCA 72 bp | TATCTCACTAAACCACTGATATCTGGGTGTGATATCTaGCCAACAGCAAACCAGCTGGAGACACGGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: YLTKPLISGCDI*PTANQLETRCS Trigger: GGAGCACCGTGTCTCCAGCTGGTTTGCTGTTGGGCAGATATCACACCCAGATATCAGTGGTTTAGTGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR CCA 72 bp | AGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTTaGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGT | + |
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Preference number: 3 (lower is better) Translates to: RPVSCKKEFLQV*ELACQSDKAPS Trigger: ACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR GCA 72 bp | TATGTAGTCAAGCAGCTGGTCTGTTGTCATAGAAACTaGCATCGAGGGCCACTGGGATCCTTTAGAAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: YVVKQLVCCHRN*HRGPLGSFRRA Trigger: AGCTCTTCTAAAGGATCCCAGTGGCCCTCGATGGCAGTTTCTATGACAACAGACCAGCTGCTTGACTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR GCA 72 bp | TCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTaGAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SHTDLLAVRKSF*KFGSWRASLTK Trigger: CTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| 3UTR GCA 72 bp | GGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTaGAAGATTCCAGGAGTTTTCTCAAGGATGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GNRRTRQVGKDL*KIPGVFSRMLD Trigger: GTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| 3UTR CCA 72 bp | CTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTaGGAACAGAAGGACACGTCAAGTAGGGAAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LALSSNTALLSI*EQKDTSSRERS Trigger: AGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTTGAGGCTGCATAACTaGGCAATATGGCCAAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: MKTFGKLALSSNTALLSILRLHN*AIWPKA Trigger: GGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAA...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| 3UTR TCA 72 bp | GACTTGAAGTACATGAATCTAGTAGGTTCCCAAGACTaGCCCAGGAAACTGGAACTGTTTGGGTCCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DLKYMNLVGSQD*PRKLELFGSML Trigger: AAGCATGGACCCAAACAGTTCCAGTTTCCTGGGTCAGTCTTGGGAACCTACTAGATTCATGTACTTCAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| 3UTR TCA 72 bp | TTGAGGCTGCATAACTTGGCAATATGGCCAAAAGCCTaGGGTGGGAGTTTATCGCAGGATGAGAGATTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLHNLAIWPKA*GGSLSQDERFK Trigger: CTTAAATCTCTCATCCTGCGATAAACTCCCACCTCAGGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| 3UTR CCA 72 bp | TTGGGTCCATGCTTGCACTTTATAGGACCTAAGCACTaGGACTACAGAACACAAGAGGTGGAAATACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LGPCLHFIGPKH*DYRTQEVEIPY Trigger: GTAAGGTATTTCCACCTCTTGTGTTCTGTAGTCCCAGTGCTTAGGTCCTATAAAGTGCAAGCATGGACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCAGGTTTTTACACTTGGCTCCTATCATGCTGGCTATCACATCATAATCTTCGTTGAGGTGGATATATaGCAGAGGATCACAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PQVFTLGSYHAGYHIIIFVEVDI*QRITAM Trigger: CATTGCTGTGATCCTCTGCAATATATCCACCTCAAC...GAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| 3UTR GCA 72 bp | CCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCATaGTGGCTATCACATCATAATCTTCAATCATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: PKSAGFYTWLLS*WLSHHNLQSSH Trigger: GTGTGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| 3UTR CCA 72 bp | ATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTaGCTCCTATCATGCTGGCTATCACATCATAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISTDPKSAGFYT*LLSCWLSHHNL Trigger: AAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| 3UTR CCA 72 bp | AAGTCCGCAGGTTTTTACACTTGGCTCCTATCATGCTaGCTATCACATCATAATCTTCAATCATCACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSAGFYTWLLSC*LSHHNLQSSHS Trigger: GCTGTGTGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCAGGTTTTTACACTTGGCTCCTATCATGCTGGCTATCACATCATAATCTTCGGATATAATAATGGATaGCTCCATAGGAAGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PQVFTLGSYHAGYHIIIFGYNNG*LHRKTH Trigger: GTGAGTCTTCCTATGGAGCAATCCATTATTATATCC...GAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| 3UTR CCA 72 bp | ATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTaGACTTACCATTCTTGTTCCTTACTTAACTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: IFARFQEFSQGC*TYHSCSLLNSR Trigger: CCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAAGACACGGTGCTCCCTaGTTTTATGGTAAAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSSMNSLSKALLYEDFRKRHGAP*FYGKGK Trigger: CTTACCTTTACCATAAAACAAGGGAGCACCGTGTCT...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| 3UTR CAA 72 bp | GACGTGTCGTCCAGCCGGGCCCAGTATGGCTGCAGGTaGAGGTGGATATATTGCAGAGGATCACAGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: DVSSSRAQYGCR*RWIYCRGSQQC Trigger: GCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTCGGATCACAGCAATGCTaGTGGAGAAGCCTGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCKFGSWRASLTKHPVLLGSQQC*WRSLQV Trigger: GACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCC...GAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| 3UTR CAA 72 bp | CCGGGCCCAGTATGGCTGCAGGTTGAGGTGGATATATaGCAGAGGATCACAGCAATGCTGGTGGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGPVWLQVEVDI*QRITAMLVEKP Trigger: AGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGGTGCCCCCAGGCTGAGGTGCTaGAGCTCTGCACAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLTILVPYLTHGNSCGAPRLRC*SSAQKF Trigger: GAACTTCTGTGCAGAGCTTCAGCACCTCAGCCTGGG...GGCACCACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR TCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCACAGCTGCCCAGGCTaGGGTGCTGAAGCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCHSCPG*GAEALH Trigger: GTGCAGAGCTTCAGCACCTCAGCCTGGGCAGCTGTG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTGCAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCGAAACACAGCCGTCTaGGTGAAGTCACCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFCKFGSWRASLTKHPVLRNTAV*VKSPEL Trigger: AAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCG...CAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGTGGGAGTTTATCGCAGGATGAGAGATTTAAGTCTTGTAGATTTGGGCGGACCACCTCTGCATTaGGAGGGGAAGTCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PEVGVYRRMRDLSLVDLGGPPLH*EGKSGC Trigger: ACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCC...GCCCAAATCTACAAGACTTAAATCTCTCATCCTGCGATAAACTCCCACCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCGGACCACCTCTGCATTaGGAGGGGAAGTCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLHLHRSKVRRFLHLAPIGPPLH*EGKSGC Trigger: ACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCC...GATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCAGCCGGGCCCAGTATaGCTGCAGGTTGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCQPGPV*LQVEVD Trigger: ATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGGACCACCTCTGCATTaGGAGGGGAAGTCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIGPPLH*EGKSGC Trigger: ACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTGCAAGTTTGGGAGCTGGCGTGCCAGTCTGACAAAGCACCCAGTGCTGCTTCATAGGTCTCTCTaGCCAAAGAATCTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCKFGSWRASLTKHPVLLHRSL*PKNLPS Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTATGAAG...CAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTGCAGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCCACAGCTGCCCAGGCTaGGGTGCTGAAGCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FARFQEFSQGCWTYHSCSHSCPG*GAEALH Trigger: GTGCAGAGCTTCAGCACCTCAGCCTGGGCAGCTGTG...GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGGTGCCGCTGGTGGAGAAGCCTaGAAGTCTGGGCTAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLTILVPYLTHGNSCGAAGGEA*KSGLIY Trigger: GTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGC...GGCACCACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGTTTGGGAGCTGGCGTaGCAGTCTGACAAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCVWELA*QSDKAP Trigger: GGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAAC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| CDS-3UTR TCA 90 bp | ACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGGGACCACCTCTGCATTaGGAGGGGAAGTCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRQVGKDLCKIPGVFSRMGPPLH*EGKSGC Trigger: ACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCC...CATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTCCCAGGCTGAGGTGCTaGAGCTCTGCACAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIPRLRC*SSAQKF Trigger: GAACTTCTGTGCAGAGCTTCAGCACCTCAGCCTGGG...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCGGTGATATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACCCCAGGCTGAGGTGCTaGAGCTCTGCACAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVIFLHLHRSKVRRFLHPRLRC*SSAQKF Trigger: GAACTTCTGTGCAGAGCTTCAGCACCTCAGCCTGGG...GTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCAAGAAGAACACAGCCAGAAGCCAACTCTGCTATCCCATTCTCGGTGATAGCTGGTGGAGAAGCCTaGAAGTCTGGGCTAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRRTQPEANSAIPFSVIAGGEA*KSGLIY Trigger: GTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGC...TATCACCGAGAATGGGATAGCAGAGTTGGCTTCTGGCTGTGTTCTTCTTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTTGGGAGCTGGCGTaGCAGTCTGACAAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIVWELA*QSDKAP Trigger: GGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAAC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGCAGCCGGGCCCAGTATaGCTGCAGGTTGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KDTSSRERSLQDSRSFLKQPGPV*LQVEVD Trigger: ATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTG...CTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCCAGCCGGGCCCAGTATaGCTGCAGGTTGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FARFQEFSQGCWTYHSCSQPGPV*LQVEVD Trigger: ATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTG...GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTTGCTGCTCTGAAGGGTaGGGCACCAGCCAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMICCSEG*GTSQGQ Trigger: TTGACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCA...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| 3UTR CAA 72 bp | GCCCAACAGCAAACCAGCTGGAGACACGGTGCTCCCTaGTTTTATGGTAAAGGTAAGTCCTTCAAAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: AQQQTSWRHGAP*FYGKGKSFKDT Trigger: GGTGTCTTTGAAGGACTTACCTTTACCATAAAACAAGGGAGCACCGTGTCTCCAGCTGGTTTGCTGTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTACACAGCCGTCTGCGTaGAGTCACCAGAACTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMITQPSA*SHQNLG Trigger: TCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGCTGGTGGAGAAGCCTaGAAGTCTGGGCTAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCAGGEA*KSGLIY Trigger: GTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCGGGCCCAGTATGGCTaGAGGTTGAGGTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCRAQYG*RLRWIY Trigger: ATATATCCACCTCAACCTGCAGCCATACTGGGCCCG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTGGCTATCACATCATAATCTTCAATCATCACACAGCTGCCCAGGCTGAGCGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HAGYHIIIFNHHTAAQAERCPSE*QGSTRT Trigger: TGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCG...CTCAGCCTGGGCAGCTGTGTGATGATTGAAGATTATGATGTGATAGCCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGCACATGGACAGCCGTaGGGTACACTTGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIAHGQP*GTLAAQ Trigger: TTGAGCAGCAAGTGTACCCCACGGCTGTCCATGTGC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTTGCTGCTCTGAAGGGTaGGGCACCAGCCAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLCCSEG*GTSQGQ Trigger: TTGACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCA...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGGTGCCCTTCATAGGTCTCTCTaGCCAAAGAATCTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLTILVPYLTHGNSCGALHRSL*PKNLPS Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTATGAAG...GGCACCACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR TCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLQEQS*ERAVAC Trigger: ACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTATACTGGACCACCTCTaGATTGAGAGGGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIILDHL*IERGSP Trigger: CGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTAT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCGAAACACAGCCGTCTaGGTGAAGTCACCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCRNTAV*VKSPEL Trigger: AAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTGGCTATCACATCATAATCTTCAATCATCACACAGCTGCCCAGGCTGAGGTGGGGTACACTTGCTaGTCAAAAGTCAGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HAGYHIIIFNHHTAAQAEVGYTC*SKVSST Trigger: TGTGGAACTGACTTTTGAGCAGCAAGTGTACCCCAC...CTCAGCCTGGGCAGCTGTGTGATGATTGAAGATTATGATGTGATAGCCAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTACGGGCCCAGTATGGCTaGAGGTTGAGGTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: YSCISTDPKSAGFYTWLLRAQYG*RLRWIY Trigger: ATATATCCACCTCAACCTGCAGCCATACTGGGCCCG...TAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCRCPSE*QGSTRT Trigger: TGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTGCACATGGACAGCCGTaGGGTACACTTGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLAHGQP*GTLAAQ Trigger: TTGAGCAGCAAGTGTACCCCACGGCTGTCCATGTGC...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGCACATGGACAGCCGTaGGGTACACTTGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KDTSSRERSLQDSRSFLKAHGQP*GTLAAQ Trigger: TTGAGCAGCAAGTGTACCCCACGGCTGTCCATGTGC...CTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | ACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGGCACATGGACAGCCGTaGGGTACACTTGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRQVGKDLCKIPGVFSRMAHGQP*GTLAAQ Trigger: TTGAGCAGCAAGTGTACCCCACGGCTGTCCATGTGC...CATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTAAAATACCCATTATGTaGCCCATCCCCAAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCKIPIM*PIPKGS Trigger: GCTGCCCTTGGGGATGGGCCACATAATGGGTATTTT...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | TCATTAAGAAAGTGGCTGCAGGATAACTCAAGGCGTACTAACTCAGACCCACACAAAATACCCATTATGTaGCCCATCCCCAAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRKWLQDNSRRTNSDPHKIPIM*PIPKGS Trigger: GCTGCCCTTGGGGATGGGCCACATAATGGGTATTTT...GTGTGGGTCTGAGTTAGTACGCCTTGAGTTATCCTGCAGCCACTTTCTTAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGGATCACAGCAATGCTaGTGGAGAAGCCTGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIGSQQC*WRSLQV Trigger: GACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGGTGCCGCAGGTTTTTACACTTaGCTCCTATCATGCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLTILVPYLTHGNSCGAAGFYT*LLSCWL Trigger: TAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGC...GGCACCACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKTFGKLALSSNTALLSILQEQS*ERAVAC Trigger: ACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAG...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTAGAGAACAAGCCTCTTaGGGCTGCATAACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCREQAS*GCITWQ Trigger: TTGCCAAGTTATGCAGCCTCAAGAGGCTTGTTCTCT...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCATACTGGACCACCTCTaGATTGAGAGGGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FARFQEFSQGCWTYHSCSILDHL*IERGSP Trigger: CGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTAT...GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTATACTGGACCACCTCTaGATTGAGAGGGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLILDHL*IERGSP Trigger: CGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTAT...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | TGCATAACTTGGCAATATGGCCAAAAGCCTGAGGTGGGAGTTTATCGCAGGATGTTGTCCTTCGTACCATaGAGCACAACTGCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CITWQYGQKPEVGVYRRMLSFVP*STTASS Trigger: ACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAA...CATCCTGCGATAAACTCCCACCTCAGGCTTTTGGCCATATTGCCAAGTTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR GCA 90 bp | ACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCGGGCCCAGTATGGCTaGAGGTTGAGGTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TRQVGKDLCKIPGVFSRMRAQYG*RLRWIY Trigger: ATATATCCACCTCAACCTGCAGCCATACTGGGCCCG...CATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTCCATCTTACTTCAGCTaGAGGATTTGGGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIPSYFS*RIWGVG Trigger: CCCTACTCCCCAAATCCTCCAGCTGAAGTAAGATGG...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCTGCTATCCCATTCTCGGTGATATTCTTGCATCTCCACAGATCCAAAGTCCATCTTACTTCAGCTaGAGGATTTGGGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCYPILGDILASPQIQSPSYFS*RIWGVG Trigger: CCCTACTCCCCAAATCCTCCAGCTGAAGTAAGATGG...ACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTATAGGACCTAAGCACTGGGACTACAGAACACAAGAGGTGGAAATACCTAAAATACCCATTATGTaGCCCATCCCCAAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFIGPKHWDYRTQEVEIPKIPIM*PIPKGS Trigger: GCTGCCCTTGGGGATGGGCCACATAATGGGTATTTT...AGGTATTTCCACCTCTTGTGTTCTGTAGTCCCAGTGCTTAGGTCCTATAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTGGATCACAGCAATGCTaGTGGAGAAGCCTGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDSRSFLKDAGLTILVPGSQQC*WRSLQV Trigger: GACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCC...AGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCGCRLR*IYCRGS Trigger: TGATCCTCTGCAATATATCCACCTCAACCTGCAGCC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| 3UTR CAA 72 bp | ACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTaGTTATCAATCTGGGAACAGAAGGACACGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFGKLALSSNTA*LSIWEQKDTSS Trigger: ACTTGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| 3UTR CAA 72 bp | AACCTGCTAAATCCTGATACAGAGATGAACCCTCTGTaGCCAGTCCAAGACAGATTAAGCCACTGGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLLNPDTEMNPL*PVQDRLSHWTS Trigger: GCTTGTCCAGTGGCTTAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR TCA 90 bp | GATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCATGCTGGCTATCACATCTTCATAGGTCTCTCTaGCCAAAGAATCTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DPKSAGFYTWLLSCWLSHLHRSL*PKNLPS Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTATGAAG...ATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTATACAAGGTTTAAACTaGCGAGCCTGGGAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCIQGLN*RAWEAF Trigger: GAATGCTTCCCAGGCTCGTCAGTTTAAACCTTGTAT...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAATACAAGGTTTAAACTaGCGAGCCTGGGAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNRRTRQVGKDLCKIPGIQGLN*RAWEAF Trigger: GAATGCTTCCCAGGCTCGTCAGTTTAAACCTTGTAT...TCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSRERSLQDSRSFLKDALQEQS*ERAVAC Trigger: ACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAG...AGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTCGAAACACAGCCGTCTaGGTGAAGTCACCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLRNTAV*VKSPEL Trigger: AAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCG...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGGGGTACACTTGCTaGTCAAAAGTCAGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIVGYTC*SKVSST Trigger: TGTGGAACTGACTTTTGAGCAGCAAGTGTACCCCAC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGAGGTGCTGAAGCTCTaGACAGAAGTTCAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCEVLKL*TEVQNA Trigger: AGCATTTTGAACTTCTGTGCAGAGCTTCAGCACCTC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTCGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSSRERSLQDSRSFLKDARCPSE*QGSTRT Trigger: TGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCG...AGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTCCATCTTACTTCAGCTaGAGGATTTGGGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLPSYFS*RIWGVG Trigger: CCCTACTCCCCAAATCCTCCAGCTGAAGTAAGATGG...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTAAAATACCCATTATGTaGCCCATCCCCAAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLKIPIM*PIPKGS Trigger: GCTGCCCTTGGGGATGGGCCACATAATGGGTATTTT...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGCAGGTTTTTACACTTaGCTCCTATCATGCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCAGFYT*LLSCWL Trigger: TAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| 3UTR CAA 72 bp | GAAGCCAACTCTGCTATCCCATTCTCGGTGATATTCTaGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EANSAIPFSVIF*HLHRSKVRRFL Trigger: TAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTGGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| 3UTR CAA 72 bp | TGGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTaGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WEQKDTSSRERS*QDSRSFLKDAG Trigger: TCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTCTTCATAGGTCTCTCTaGCCAAAGAATCTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMILHRSL*PKNLPS Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTATGAAG...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCGGTGATATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACATACAAGGTTTAAACTaGCGAGCCTGGGAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVIFLHLHRSKVRRFLHIQGLN*RAWEAF Trigger: GAATGCTTCCCAGGCTCGTCAGTTTAAACCTTGTAT...GTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATATCACCGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | TATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVCVTHRPVSCKKEFLQVLQEQS*ERAVAC Trigger: ACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAG...AACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTTTGTCCTTCGTACCATaGAGCACAACTGCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMILSFVP*STTASS Trigger: ACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAA...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTTGTCCTTCGTACCATaGAGCACAACTGCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MKTFGKLALSSNTALLSILSFVP*STTASS Trigger: ACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAA...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTTGAGGTGGATATATTaGAGAGGATCACAGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLRWIY*RGSQQC Trigger: GCATTGCTGTGATCCTCTGCAATATATCCACCTCAA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR GCA 90 bp | TTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCTTGAGGTGGATATATTaGAGAGGATCACAGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLHLHRSKVRRFLHLAPILRWIY*RGSQQC Trigger: GCATTGCTGTGATCCTCTGCAATATATCCACCTCAA...GATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAGGATGCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGAGGTGCTGAAGCTCTaGACAGAAGTTCAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDAGLTILVPYLTHGNSCEVLKL*TEVQNA Trigger: AGCATTTTGAACTTCTGTGCAGAGCTTCAGCACCTC...ACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR GCA 90 bp | TATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTAGAGGTGCTGAAGCTCTaGACAGAAGTTCAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSCISTDPKSAGFYTWLLEVLKL*TEVQNA Trigger: AGCATTTTGAACTTCTGTGCAGAGCTTCAGCACCTC...TAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTACTTGGGAAGACATTTaGTACACCTGCCAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNRRTRQVGKDLCKIPGVTWEDI*YTCQIP Trigger: TGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGT...AACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGAAGTCACCAGAACTTaGGAAGACATTTGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIEVTRT*EDIWYT Trigger: GGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTACTTAACTCACCGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSFLKDAGLTILVPYLTHRCPSE*QGSTRT Trigger: TGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCG...GTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTAGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ARFQEFSQGCWTYHSCSLGCRLR*IYCRGS Trigger: TGATCCTCTGCAATATATCCACCTCAACCTGCAGCC...TAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGCTGCAGGTTGAGGTaGATATATTGCAGAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSRERSLQDSRSFLKDAGCRLR*IYCRGS Trigger: TGATCCTCTGCAATATATCCACCTCAACCTGCAGCC...AGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGTGTCATTAAGAAAGTaGCTGCAGGATAACTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCVSLRK*LQDNSR Trigger: CCTTGAGTTATCCTGCAGCCACTTTCTTAATGACAC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGCCTTGTTATCAATCTaGGAACAGAAGGACACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIALLSI*EQKDTS Trigger: TGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039234.10 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTAAACCTGCTAAATCCTaGTACAGAGATGAACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIKPAKS*YRDEPS Trigger: AGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTTT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTGGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAAAACCTGCTAAATCCTaGTACAGAGATGAACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGNRRTRQVGKDLCKIPKPAKS*YRDEPS Trigger: AGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTTT...TGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR TCA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTAGAGAACAAGCCTCTTaGGGCTGCATAACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIFARFQEFSQGCWTYHSREQAS*GCITWQ Trigger: TTGCCAAGTTATGCAGCCTCAAGAGGCTTGTTCTCT...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | GTAATCACACACCTACGTTCTACCATATTTCTGAGAATTAATCTCAGGACTGAAATACTGGACCACCTCTaGATTGAGAGGGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VITHLRSTIFLRINLRTEILDHL*IERGSP Trigger: CGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTAT...TTCAGTCCTGAGATTAATTCTCAGAAATATGGTAGAACGTAGGTGTGTGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCTTGAGGTGGATATATTaGAGAGGATCACAGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: MKTFGKLALSSNTALLSILRWIY*RGSQQC Trigger: GCATTGCTGTGATCCTCTGCAATATATCCACCTCAA...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCACAGAAGTTCAAAATaGTCAGTAGTGCTGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCHRSSK*SVVLFA Trigger: AGCAAACAGCACTACTGAGCATTTTGAACTTCTGTG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTACTTCTTTAGCATACTaGACCACCTCTGCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMITSLAY*TTSALR Trigger: TCTCAATGCAGAGGTGGTCCAGTATGCTAAAGAAGT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCTGCCAAATTCCACATaGTATAGGACATACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLPNST*YRTYCS Trigger: AGAACAGTATGTCCTATACCATGTGGAATTTGGCAG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACTCAAGGCGTACTAACTCAGACCCACACACCTTTAGAAACCTGCTACTGCCAAATTCCACATaGTATAGGACATACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDNSRRTNSDPHTFRNLLLPNST*YRTYCS Trigger: AGAACAGTATGTCCTATACCATGTGGAATTTGGCAG...TAGCAGGTTTCTAAAGGTGTGTGGGTCTGAGTTAGTACGCCTTGAGTTATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTACTTGGGAAGACATTTaGTACACCTGCCAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMITWEDI*YTCQIP Trigger: TGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CCA 90 bp | GCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTAGAAGTCACCAGAACTTaGGAAGACATTTGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: ARFQEFSQGCWTYHSCSLEVTRT*EDIWYT Trigger: GGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTC...TAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS-3UTR CCA 90 bp | ACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGAAGTCACCAGAACTTaGGAAGACATTTGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: TSSRERSLQDSRSFLKDAEVTRT*EDIWYT Trigger: GGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTC...AGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGTCATTAAGAAAGTaGCTGCAGGATAACTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIVSLRK*LQDNSR Trigger: CCTTGAGTTATCCTGCAGCCACTTTCTTAATGACAC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTGGCTCCTATCATGCTaGCTATCACATCATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCWLLSC*LSHHNL Trigger: AAGATTATGATGTGATAGCCAGCATGATAGGAGCCA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
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| 3UTR CAA 72 bp | GCTTTGGTTGTAGGTACCGGAGGATATAATAATGGATaGCTCCATAGGAAGACTCACTTCTGTGCATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVVGTGGYNNG*LHRKTHFCACV Trigger: TACACATGCACAGAAGTGAGTCTTCCTATGGAGCAATCCATTATTATATCCTCCGGTACCTACAACCAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| 3UTR CAA 72 bp | AAGCTCTTCTTTATGAAGACTTTCGGAAAGCTCGCGTaGAGCTCTAACACAGCCTTGTTATCAATCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLFFMKTFGKLA*SSNTALLSIWE Trigger: TTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCATAAAGAAGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTACTTAACTCACATACAAGGTTTAAACTaGCGAGCCTGGGAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFLKDAGLTILVPYLTHIQGLN*RAWEAF Trigger: GAATGCTTCCCAGGCTCGTCAGTTTAAACCTTGTAT...GTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS-3UTR TCA 90 bp | TTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTAAACCTGCTAAATCCTaGTACAGAGATGAACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQDSRSFLKDAGLTILVPKPAKS*YRDEPS Trigger: AGAGGGTTCATCTCTGTATCAGGATTTAGCAGGTTT...AGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGACATTTGGTACACCTaGCAAATTCCACATGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIDIWYT*QIPHGI Trigger: TATACCATGTGGAATTTGGCAGGTGTACCAAATGTC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAACGAAACACAGCCGTCTaGGTGAAGTCACCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKRNTAV*VKSPEL Trigger: AAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCG...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTTGTCCTTCGTACCATaGAGCACAACTGCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KIFARFQEFSQGCWTYHSLSFVP*STTASS Trigger: ACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAA...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTACTTGGCTCCTATCATaGTGGCTATCACATCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMITWLLS*WLSHHN Trigger: ATTATGATGTGATAGCCAGCATGATAGGAGCCAAGT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| CDS-3UTR GCA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTCTGGTACAATTAGATaGCAGTTCTTCTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCSGTIR*QFFYVC Trigger: ACAGACATAGAAGAACTGGCATCTAATTGTACCAGA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGAGTTTTCTCAAGGATaGTGGACTTACCATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIEFSQG*WTYHSC Trigger: ACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039234.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCACTTGGGAAGACATTTaGTACACCTGCCAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FARFQEFSQGCWTYHSCSTWEDI*YTCQIP Trigger: TGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGT...GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAAGTTCAAAATGCTCAGTAGTGCTGTTTGCTCTACTTTTGTCCGATAGAGAAGTCACCAGAACTTaGGAAGACATTTGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: HRSSKCSVVLFALLLSDREVTRT*EDIWYT Trigger: GGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTC...TCTATCGGACAAAAGTAGAGCAAACAGCACTACTGAGCATTTTGAACTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184455.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAACCATCTTACTTCAGCTaGAGGATTTGGGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKPSYFS*RIWGVG Trigger: CCCTACTCCCCAAATCCTCCAGCTGAAGTAAGATGG...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTGTGTCATTAAGAAAGTaGCTGCAGGATAACTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRERSLQDSRSFLKDAGLVSLRK*LQDNSR Trigger: CCTTGAGTTATCCTGCAGCCACTTTCTTAATGACAC...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTTTTTCTCAAGGATGCTaGACTTACCATTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNRRATPTRSHQSMIFSQGC*TYHSCS Trigger: GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAA...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039234.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAAGAGAACAAGCCTCTTaGGGCTGCATAACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKREQAS*GCITWQ Trigger: TTGCCAAGTTATGCAGCCTCAAGAGGCTTGTTCTCT...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAGTGGGGTACACTTGCTaGTCAAAAGTCAGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKVGYTC*SKVSST Trigger: TGTGGAACTGACTTTTGAGCAGCAAGTGTACCCCAC...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | ACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTCACAGAAGTTCAAAATaGTCAGTAGTGCTGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSRERSLQDSRSFLKDAHRSSK*SVVLFA Trigger: AGCAAACAGCACTACTGAGCATTTTGAACTTCTGTG...AGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | TATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTACTTCTTTAGCATACTaGACCACCTCTGCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVCVTHRPVSCKKEFLQVTSLAY*TTSALR Trigger: TCTCAATGCAGAGGTGGTCCAGTATGCTAAAGAAGT...AACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTACTTCTTTAGCATACTaGACCACCTCTGCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIFARFQEFSQGCWTYHSTSLAY*TTSALR Trigger: TCTCAATGCAGAGGTGGTCCAGTATGCTAAAGAAGT...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGTGGCTCCTATCATGCTaGCTATCACATCATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDTSSRERSLQDSRSFLKWLLSC*LSHHNL Trigger: AAGATTATGATGTGATAGCCAGCATGATAGGAGCCA...CTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTCTGGTACAATTAGATaGCAGTTCTTCTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FARFQEFSQGCWTYHSCSSGTIR*QFFYVC Trigger: ACAGACATAGAAGAACTGGCATCTAATTGTACCAGA...GGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAACTTGGGAAGACATTTaGTACACCTGCCAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKTWEDI*YTCQIP Trigger: TGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGT...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAACTTGGCTCCTATCATaGTGGCTATCACATCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSMNSLSKALLYEDFRKTWLLS*WLSHHN Trigger: ATTATGATGTGATAGCCAGCATGATAGGAGCCAAGT...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS CCA 90 bp | TTCCACATAGTCCTGGCTCTGGAAACTGGACGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACACTGATCCCACCACGTCCCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHIVLALETGRCPSE*QGSTRTLIPPRPIS Trigger: ACTTATGGGACGTGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCGTCCAGTTTCCAGAGCCAGGACTATGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 90 bp | GGCTGCAGGTTGAGGTGGATATATTGCAGAGGATCACAGCAATGCTaGTGGAGAAGCCTGCAAGTCTGGGCTAATCTACACAGGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLRWIYCRGSQQC*WRSLQVWANLHRSG Trigger: ACCAGACCTGTGTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS TCA 90 bp | CTCCCATCTTACTTCAGCTGGAGGATTTGGGGAGTAGGGATTTGCTaGGCAGGCCAGAATTCTGATGACTGCTCCAGGATGGTAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSYFSWRIWGVGIC*AGQNSDDCSRMVSL Trigger: GAGACTTACCATCCTGGAGCAGTCATCAGAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAAATCCTCCAGCTGAAGTAAGATGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS CCA 90 bp | TCTGCATTGAGAGGGGAAGTCCGGCTGTTTGACACTATAGTCCTATaGCTGTTCATCATATCTCCTCTTGTAGCTGTCCTGGCTCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: SALRGEVRLFDTIVL*LFIISPLVAVLARR Trigger: GCGTCGAGCCAGGACAGCTACAAGAGGAGATATGATGAACAGCCATAGGACTATAGTGTCAAACAGCCGGACTTCCCCTCTCAATGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTTGGACCACCTCTGCATaGAGAGGGGAAGTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMIWTTSA*RGEVRL Trigger: CAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCA...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | CCGCAGGTTTTTACACTTGGCTCCTATCATGCTGGCTATCACATCATAATCTTCTGGACCACCTCTGCATaGAGAGGGGAAGTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQVFTLGSYHAGYHIIIFWTTSA*RGEVRL Trigger: CAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCA...GAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAGGATGCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTTGGACCACCTCTGCATaGAGAGGGGAAGTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KDAGLTILVPYLTHGNSCWTTSA*RGEVRL Trigger: CAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCA...ACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
||
| CDS TCA 90 bp | ACTGATCCCACCACGTCCCATAAGTTCGAAACACAGCCGTCTGCGTaGAGTCACCAGAACTTGGGAAGACATTTGGTACACCTGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TDPTTSHKFETQPSA*SHQNLGRHLVHLPN Trigger: ATTTGGCAGGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCGAACTTATGGGACGTGGTGGGATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS GCA 90 bp | TATGGCTGCAGGTTGAGGTGGATATATTGCAGAGGATCACAGCAATaGTGGTGGAGAAGCCTGCAAGTCTGGGCTAATCTACACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YGCRLRWIYCRGSQQ*WWRSLQVWANLHRS Trigger: AGACCTGTGTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | TGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTATGGACCACCTCTGCATaGAGAGGGGAAGTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CKIPGVFSRMLDLPFLFLWTTSA*RGEVRL Trigger: CAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCA...TAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| CDS TCA 90 bp | AGCATACTGGACCACCTCTGCATTGAGAGGGGAAGTCCGGCTGTTTaGCACTATAGTCCTATGGCTGTTCATCATATCTCCTCTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SILDHLCIERGSPAV*HYSPMAVHHISSCS Trigger: GCTACAAGAGGAGATATGATGAACAGCCATAGGACTATAGTGTCAAACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | CTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCATAGCCGTGGGGTACACTaGCTGCTCAAAAGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASPQIQSPQVFTLGSYHSRGVH*LLKSQF Trigger: GAACTGACTTTTGAGCAGCAAGTGTACCCCACGGCT...ATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGAAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTAGCCGTGGGGTACACTaGCTGCTCAAAAGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GNRRTRQVGKDLCKIPGVSRGVH*LLKSQF Trigger: GAACTGACTTTTGAGCAGCAAGTGTACCCCACGGCT...AACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTTGGGGAGTAGGGATTaGCTGAGCAGGCCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLGSRD*LSRPEF Trigger: GAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS GCA 90 bp | GGTGGATATATTGCAGAGGATCACAGCAATGCTGGTGGAGAAGCCTaGAAGTCTGGGCTAATCTACACAGGTCTGGTAGTGAAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGYIAEDHSNAGGEA*KSGLIYTGLVVKDD Trigger: ATCATCTTTCACTACCAGACCTGTGTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGCATTGCTGTGATCCTCTGCAATATATCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 90 bp | CCCATAAGTTCGAAACACAGCCGTCTGCGTGAAGTCACCAGAACTTaGGAAGACATTTGGTACACCTGCCAAATTCCACATGGTATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PISSKHSRLREVTRT*EDIWYTCQIPHGIG Trigger: TCCTATACCATGTGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCGAACTTATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTAGCCGTGGGGTACACTaGCTGCTCAAAAGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMISRGVH*LLKSQF Trigger: GAACTGACTTTTGAGCAGCAAGTGTACCCCACGGCT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | GCTGGACTTACCATTCTTGTTCCTTACTTAACTCACGGCAACTCGTGTGGTGCCCTGTTTGCTCTACTTTaGTCCGATAGAGAACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLTILVPYLTHGNSCGALFALL*SDREQA Trigger: GGCTTGTTCTCTATCGGACAAAAGTAGAGCAAACAG...GGCACCACACGAGTTGCCGTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS TCA 90 bp | CATAGTCGTCATCTTCTAGATCATTCATGTCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGTCCTTCGTACCATGCAGCACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRHLLDHSCLQEQS*ERAVACPSYHAAQL Trigger: CAGTTGTGCTGCATGGTACGAAGGACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAGACATGAATGATCTAGAAGATGACGACTATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 90 bp | AAACACAGCCGTCTGCGTGAAGTCACCAGAACTTGGGAAGACATTTaGTACACCTGCCAAATTCCACATGGTATAGGACATACTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KHSRLREVTRTWEDI*YTCQIPHGIGHTVL Trigger: GAGAACAGTATGTCCTATACCATGTGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGAGCCGTGGGGTACACTaGCTGCTCAAAAGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDTSSRERSLQDSRSFLKSRGVH*LLKSQF Trigger: GAACTGACTTTTGAGCAGCAAGTGTACCCCACGGCT...CTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTTTGGGGAGTAGGGATTaGCTGAGCAGGCCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SRERSLQDSRSFLKDAGLLGSRD*LSRPEF Trigger: GAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAA...AAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTGAGATGAACCCTCTGTaGCCAGTCCAAGACAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCEMNPL*PVQDRL Trigger: TAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTC...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTTGAGGCTGCATAACTaGGCAATATGGCCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLRLHN*AIWPKA Trigger: GGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTCGCAGGTTTTTACACTaGGCTCCTATCATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMIRRFLH*APIMLA Trigger: AGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCG...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTAACTTGGGAAGACATTaGGTACACCTGCCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCNLGRH*VHLPNS Trigger: GGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGTT...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTTGGGGAGTAGGGATTaGCTGAGCAGGCCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KIFARFQEFSQGCWTYHSLGSRD*LSRPEF Trigger: GAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAA...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTCCAGAAGAGAACTATaGACTTCCAGTCGTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCSRREL*TSSRMR Trigger: CCTCATACGACTGGAAGTCAATAGTTCTCTTCTGGA...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCGTTGAGGTGGATATATaGCAGAGGATCACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FLHLHRSKVRRFLHLAPIVEVDI*QRITAM Trigger: CATTGCTGTGATCCTCTGCAATATATCCACCTCAAC...GATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCTGTTTGCTCTACTTTaGTCCGATAGAGAACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLFALL*SDREQA Trigger: GGCTTGTTCTCTATCGGACAAAAGTAGAGCAAACAG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | TATTCTTGCATCTCCACAGATCCAAAGTCCGCAGGTTTTTACACTTGGCTCCTATCCAGAAGAGAACTATaGACTTCCAGTCGTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSCISTDPKSAGFYTWLLSRREL*TSSRMR Trigger: CCTCATACGACTGGAAGTCAATAGTTCTCTTCTGGA...TAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCTGTGGAGATGCAAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTTGAGGTGGATATATaGCAGAGGATCACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMIVEVDI*QRITAM Trigger: CATTGCTGTGATCCTCTGCAATATATCCACCTCAAC...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACGTCAAGTAGGGAAAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGAGATGAACCCTCTGTaGCCAGTCCAAGACAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: KDTSSRERSLQDSRSFLKEMNPL*PVQDRL Trigger: TAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTC...CTTGAGAAAACTCCTGGAATCTTGCAAAGATCTTTCCCTACTTGACGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGACTTTCGGAAAGCTCGCGTTGAGCTCTAACACAGCCTTGTTATCAATCCTGTTTGCTCTACTTTaGTCCGATAGAGAACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MKTFGKLALSSNTALLSILFALL*SDREQA Trigger: GGCTTGTTCTCTATCGGACAAAAGTAGAGCAAACAG...GATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGCTTTCCGAAAGTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
||
| CDS-3UTR CAA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTCGCAGGTTTTTACACTaGGCTCCTATCATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KIFARFQEFSQGCWTYHSRRFLH*APIMLA Trigger: AGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCG...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTAGCTCTAACACAGCCTaGTTATCAATCTGGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMISSNTA*LSIWEQ Trigger: CTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCT...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039234.10 |
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| CDS-3UTR CAA 90 bp | GTAATCACACACCTACGTTCTACCATATTTCTGAGAATTAATCTCAGGACTGAATTGGGGAGTAGGGATTaGCTGAGCAGGCCAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: VITHLRSTIFLRINLRTELGSRD*LSRPEF Trigger: GAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAA...TTCAGTCCTGAGATTAATTCTCAGAAATATGGTAGAACGTAGGTGTGTGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | TTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTGTTGAGGTGGATATATaGCAGAGGATCACAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LQDSRSFLKDAGLTILVPVEVDI*QRITAM Trigger: CATTGCTGTGATCCTCTGCAATATATCCACCTCAAC...AGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAGATCTTTGCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTTGAGGCTGCATAACTaGGCAATATGGCCAAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: KIFARFQEFSQGCWTYHSLRLHN*AIWPKA Trigger: GGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAA...AGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCAAAGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AAAAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTTTCTCGGTGATATTCTaGCATCTCCACAGATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: KNQTNRRATPTRSHQSMIFSVIF*HLHRSK Trigger: TTTGGATCTGTGGAGATGCAAGAATATCACCGAGAA...AATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039234.10 ENSMUST00000184582.2 |
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| CDS-3UTR CAA 90 bp | AAACCAAACAAACAGAAGAGCCACCCCCACAAGAAGCCACCAAAGCATGATTGTCTGGACTTACCATTCTaGTTCCTAATATGTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KPNKQKSHPHKKPPKHDCLDLPF*FLICPV Trigger: AACTGGACATATTAGGAACAAGAATGGTAAGTCCAG...ACAATCATGCTTTGGTGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039234.10 |
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| CDS-3UTR CAA 90 bp | TATGTCTGTGTCACACACAGACCTGTTAGCTGTAAGAAAGAGTTTCTGCAAGTTTCCAGAAGAGAACTATaGACTTCCAGTCGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: YVCVTHRPVSCKKEFLQVSRREL*TSSRMR Trigger: CCTCATACGACTGGAAGTCAATAGTTCTCTTCTGGA...AACTTGCAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184455.8 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAAGAGATGAACCCTCTGTaGCCAGTCCAAGACAGATTA | + |
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Preference number: 5 (lower is better) Translates to: QSSMNSLSKALLYEDFRKEMNPL*PVQDRL Trigger: TAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTC...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAATTGAGGCTGCATAACTaGGCAATATGGCCAAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: QSSMNSLSKALLYEDFRKLRLHN*AIWPKA Trigger: GGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAA...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTACTTAACTCACTTCTCGGTGATATTCTaGCATCTCCACAGATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: RSFLKDAGLTILVPYLTHFSVIF*HLHRSK Trigger: TTTGGATCTGTGGAGATGCAAGAATATCACCGAGAA...GTGAGTTAAGTAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS-3UTR CAA 90 bp | GCAAGATTCCAGGAGTTTTCTCAAGGATGCTGGACTTACCATTCTTGTTCCTTAACTATCCTAACAGTTTaGAAAACCTGTTTCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ARFQEFSQGCWTYHSCSLTILTV*KTCFRP Trigger: AGGCCTGAAACAGGTTTTCAAAACTGTTAGGATAGT...TAAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184582.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGTATGAACTCATTGAGTAAAGCTCTTCTTTATGAAGACTTTCGGAAATCCAGAAGAGAACTATaGACTTCCAGTCGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: QSSMNSLSKALLYEDFRKSRREL*TSSRMR Trigger: CCTCATACGACTGGAAGTCAATAGTTCTCTTCTGGA...TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 72 bp | GTCCTGGCTCTGGAAACTGGACGGTGTCCTTCTGAATaGCAAGGAAGCACTAGGACACTGATCCCACCACGT | + |
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Preference number: 6 (lower is better) Translates to: VLALETGRCPSE*QGSTRTLIPPR Trigger: ACGTGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAGAAGGACACCGTCCAGTTTCCAGAGCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS TCA 72 bp | TACTTCAGCTGGAGGATTTGGGGAGTAGGGATTTGCTaGGCAGGCCAGAATTCTGATGACTGCTCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: YFSWRIWGVGIC*AGQNSDDCSRM Trigger: CATCCTGGAGCAGTCATCAGAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAAATCCTCCAGCTGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS TCA 72 bp | GACCACCTCTGCATTGAGAGGGGAAGTCCGGCTGTTTaGCACTATAGTCCTATGGCTGTTCATCATATCTCC | + |
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Preference number: 6 (lower is better) Translates to: DHLCIERGSPAV*HYSPMAVHHIS Trigger: GGAGATATGATGAACAGCCATAGGACTATAGTGTCAAACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS TCA 72 bp | ACCACGTCCCATAAGTTCGAAACACAGCCGTCTGCGTaGAGTCACCAGAACTTGGGAAGACATTTGGTACAC | + |
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Preference number: 6 (lower is better) Translates to: TTSHKFETQPSA*SHQNLGRHLVH Trigger: GTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCGAACTTATGGGACGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CAA 90 bp | GAACTGAAATCCACCACTTCTTTAGCATACTGGACCACCTCTGCATaGAGAGGGGAAGTCCGGCTGTTTGACACTATAGTCCTATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ELKSTTSLAYWTTSA*RGEVRLFDTIVLWL Trigger: CAGCCATAGGACTATAGTGTCAAACAGCCGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTATGCTAAAGAAGTGGTGGATTTCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 72 bp | AGAGGGGAAGTCCGGCTGTTTGACACTATAGTCCTATaGCTGTTCATCATATCTCCTCTTGTAGCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGEVRLFDTIVL*LFIISPLVAVL Trigger: CAGGACAGCTACAAGAGGAGATATGATGAACAGCCATAGGACTATAGTGTCAAACAGCCGGACTTCCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 72 bp | TCGAAACACAGCCGTCTGCGTGAAGTCACCAGAACTTaGGAAGACATTTGGTACACCTGCCAAATTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: SKHSRLREVTRT*EDIWYTCQIPH Trigger: ATGTGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTCACGCAGACGGCTGTGTTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CAA 72 bp | ATGTCTACAAGAGCAGTCTTGAGAGAGAGCAGTGGCTaGTCCTTCGTACCATGCAGCACAACTGCATCTAGT | + |
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Preference number: 6 (lower is better) Translates to: MSTRAVLRESSG*SFVPCSTTASS Trigger: ACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAGACAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS TCA 72 bp | CATCTTCTAGATCATTCATGTCTACAAGAGCAGTCTTaGGAGAGAGCAGTGGCTTGTCCTTCGTACCATGCA | + |
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Preference number: 6 (lower is better) Translates to: HLLDHSCLQEQS*ERAVACPSYHA Trigger: TGCATGGTACGAAGGACAAGCCACTGCTCTCTCTCAAGACTGCTCTTGTAGACATGAATGATCTAGAAGATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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| CDS CCA 72 bp | TTGGGAAGACATTTGGTACACCTGCCAAATTCCACATaGTATAGGACATACTGTTCTCACTGCCGTAATGGG | + |
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Preference number: 6 (lower is better) Translates to: LGRHLVHLPNST*YRTYCSHCRNG Trigger: CCCATTACGGCAGTGAGAACAGTATGTCCTATACCATGTGGAATTTGGCAGGTGTACCAAATGTCTTCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039234.10 ENSMUST00000184455.8 ENSMUST00000184582.2 ENSMUST00000185029.8 |
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