Pregenerated sensors for FATE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053593Ensembl transcript IDs: ENSMUST00000066116.8, ENSMUST00000114569.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCTAAGCAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTaGTGGGAGATAGAAAGAGGTAGGCAAGGATATCCCTGGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: RPKQRCKINQLLPEG*WEIERGRQGYPWKQ Trigger: TTGCTTCCAGGGATATCCTTGCCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTGCTTAGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR CCA 90 bp | CCTAAGCAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTGCTaGGAGATAGAAAGAGGTAGGCAAGGATATCCCTGGAAGCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: PKQRCKINQLLPEGC*EIERGRQGYPWKQR Trigger: TCTTTGCTTCCAGGGATATCCTTGCCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTGCTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGAGTGGTATGGAAACAATCAAGGGAGGGATACAAAGCCAAACCCTACTCCTGCTACCTGAGGGCTaGTGGGAGATAGAAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GLSGMETIKGGIQSQTLLLLPEG*WEIERG Trigger: ACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAG...GAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAGGTAGTAATACCTAATGCTGGTGTTTCTGTCATGGCTGGTACCATCAATCTCACAACAGCATaGCTCATCTCCAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRQVVIPNAGVSVMAGTINLTTA*LISRQE Trigger: CTCCTGCCTGGAGATGAGCCATGCTGTTGTGAGATT...GATGGTACCAGCCATGACAGAAACACCAGCATTAGGTATTACTACCTGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR GCA 90 bp | CTATTCATTCAGAGGAGTAACATCTCAACCCAGACACACCTGTGTGATACTACCCTGCTACCTGAGGGCTaGTGGGAGATAGAAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: LFIQRSNISTQTHLCDTTLLPEG*WEIERG Trigger: ACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAG...GGTAGTATCACACAGGTGTGTCTGGGTTGAGATGTTACTCCTCTGAATGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGGATACAAAGCCAACTACCTGAGGGCTGCTaGGAGATAGAAAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SSKGLSGMETIKGGIQSQLPEGC*EIERGR Trigger: CCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAG...TTGGCTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGAAACTACCTGAGGGCTGCTaGGAGATAGAAAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SREGYKAKPYSQKMEEKKLPEGC*EIERGR Trigger: CCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAG...TTTCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTATTCATTCAGAGGAGTAACATCTCAACCCAGACACACCTGTGTGATAAGGCAAGGATATCCCTaGAAGCAAAGAAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSYSFRGVTSQPRHTCVIRQGYP*KQRKEG Trigger: TCCCTCTTTTCTTTGCTTCCAGGGATATCCTTGCCT...TATCACACAGGTGTGTCTGGGTTGAGATGTTACTCCTCTGAATGAATAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR-3UTR CCA 90 bp | AATCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGAAGGCAAGGATATCCCTaGAAGCAAAGAAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: NQGRDTKPNPTHRRWKRRRQGYP*KQRKEG Trigger: TCCCTCTTTTCTTTGCTTCCAGGGATATCCTTGCCT...TCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR GCA 72 bp | CAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTaGTGGGAGATAGAAAGAGGTAGGCAAGGATATCCC | + |
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Preference number: 3 (lower is better) Translates to: QRCKINQLLPEG*WEIERGRQGYP Trigger: GGGATATCCTTGCCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR CCA 72 bp | AGGTGTAAAATAAATCAACTGCTACCTGAGGGCTGCTaGGAGATAGAAAGAGGTAGGCAAGGATATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RCKINQLLPEGC*EIERGRQGYPW Trigger: CCAGGGATATCCTTGCCTACCTCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR TCA 72 bp | ATCTCAACCCAGACACACCTGTGTGATACTACCCAGTaGTTACCTAGCCTTCCAGCAGCTAAAAATCTCACA | + |
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Preference number: 3 (lower is better) Translates to: ISTQTHLCDTTQ*LPSLPAAKNLT Trigger: TGTGAGATTTTTAGCTGCTGGAAGGCTAGGTAATCACTGGGTAGTATCACACAGGTGTGTCTGGGTTGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| 3UTR CCA 72 bp | CATTTATTGAGCATGTTCTTCAAGCAAAGGCTTGAGTaGTATGGAAACAATCAAGGGAGGGATACAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: HLLSMFFKQRLE*YGNNQGRDTKP Trigger: TGGCTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGAAGAACATGCTCAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGGTAGTAATACCTAATGCTGGTGTTTCTGTCATGGCTGGTACCATCGCATCTGCCTTCTCATaGCTTCCATCTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QRQVVIPNAGVSVMAGTIASAFS*LPSPGH Trigger: ATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGC...GATGGTACCAGCCATGACAGAAACACCAGCATTAGGTATTACTACCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR TCA 90 bp | AATCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGACCATCTCCAGGCCATTaGGCTCTTCCAGGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: NQGRDTKPNPTHRRWKRRPSPGH*ALPGQS Trigger: AGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGG...TCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR TCA 90 bp | CTATTCATTCAGAGGAGTAACATCTCAACCCAGACACACCTGTGTGATACTACCCCATCTCCAGGCCATTaGGCTCTTCCAGGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: LFIQRSNISTQTHLCDTTPSPGH*ALPGQS Trigger: AGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGG...GGTAGTATCACACAGGTGTGTCTGGGTTGAGATGTTACTCCTCTGAATGAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CCA 90 bp | TCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGGATACAAAGCCAACACCAGGTGGCATCCTaGTCCTCAAGGATATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKGLSGMETIKGGIQSQHQVAS*SSRICS Trigger: GCTGCATATCCTTGAGGACCAGGATGCCACCTGGTG...TTGGCTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR TCA 90 bp | TCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGAAAGCATCTGCCTTCTCATaGCTTCCATCTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SREGYKAKPYSQKMEEKKASAFS*LPSPGH Trigger: ATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGC...TTTCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | TCTCACAACAGCATGGCTCATCTCCAGGCAGGAGGCCTAAGCAGAGGTGTAAAAGAAGTCATTTGCATCTaGCTTCTCATGACTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHNSMAHLQAGGLSRGVKEVICI*LLMTSI Trigger: GATGGAAGTCATGAGAAGGCAGATGCAAATGACTTC...TTTTACACCTCTGCTTAGGCCTCCTGCCTGGAGATGAGCCATGCTGTTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | CTATTCATTCAGAGGAGTAACATCTCAACCCAGACACACCTGTGTGATACTACCGCCACAGGTTGGCTATaGAGACCGATACCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRSNISTQTHLCDTTATGWL*RPIPTE Trigger: CTCTGTTGGTATCGGTCTGCATAGCCAACCTGTGGC...GGTAGTATCACACAGGTGTGTCTGGGTTGAGATGTTACTCCTCTGAATGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTGCTGGGAGATAGAAAGAGCCACAGGTTGGCTATaGAGACCGATACCAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: QRCKINQLLPEGCWEIERATGWL*RPIPTE Trigger: CTCTGTTGGTATCGGTCTGCATAGCCAACCTGTGGC...TCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CCA 90 bp | GTAATACCTAATGCTGGTGTTTCTGTCATGGCTGGTACCATCCTCCTATTCATTCACCAGGTGGCATCCTaGTCCTCAAGGATATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VIPNAGVSVMAGTILLFIHQVAS*SSRICS Trigger: GCTGCATATCCTTGAGGACCAGGATGCCACCTGGTG...AATGAATAGGAGGATGGTACCAGCCATGACAGAAACACCAGCATTAGGTATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CCA 90 bp | AATCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGACCCAAAGCCACAGGTTaGCTATGCAGACCGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: NQGRDTKPNPTHRRWKRRPKATG*LCRPIP Trigger: TGGTATCGGTCTGCATAGCCAACCTGTGGCTTTGGG...TCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CCA 90 bp | AATCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGAAGCTGGACATCATCATaGCTATGCTCTCTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: NQGRDTKPNPTHRRWKRRSWTSS*LCSLGT Trigger: GGTGCCAAGAGAGCATAGCCATGATGATGTCCAGCT...TCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTGCTGGGAGATAGAAAGAAGCTGGACATCATCATaGCTATGCTCTCTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QRCKINQLLPEGCWEIERSWTSS*LCSLGT Trigger: GGTGCCAAGAGAGCATAGCCATGATGATGTCCAGCT...TCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | TTGAGCATGTTCTTCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGTTCCAGGCCAATCTTTaGCATTATATCTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSMFFKQRLEWYGNNQGRFQANL*HYICLQ Trigger: CTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAA...CCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGAAGAACATGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | CTATTCATTCAGAGGAGTAACATCTCAACCCAGACACACCTGTGTGATACTACCTTCCAGGCCAATCTTTaGCATTATATCTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFIQRSNISTQTHLCDTTFQANL*HYICLQ Trigger: CTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAA...GGTAGTATCACACAGGTGTGTCTGGGTTGAGATGTTACTCCTCTGAATGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGGATACAAAGCGCCCAGAAGTCATTTaGATCTGCCTTCTCATGACT | + |
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Preference number: 4 (lower is better) Translates to: FFKQRLEWYGNNQGRDTKRPEVI*ICLLMT Trigger: AGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCG...CTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGTGTAAAATAAATCAACTGCTACCTGAGGGCTGCTGGGAGATAGAAAGAGAAGTCATTTGCATCTaGCTTCTCATGACTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: QRCKINQLLPEGCWEIEREVICI*LLMTSI Trigger: GATGGAAGTCATGAGAAGGCAGATGCAAATGACTTC...TCTTTCTATCTCCCAGCAGCCCTCAGGTAGCAGTTGATTTATTTTACACCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 90 bp | GCAGCCTCCTTATGGCACCAGGTGGCATCCTGGTCCTCAAGGATATaGAGCCGCCCAGAAGTCATTTGCATCTGCCTTCTCATGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: AASLWHQVASWSSRI*SRPEVICICLLMTS Trigger: GGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAGGATGCCACCTGGTGCCATAAGGAGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 90 bp | TCCTGGTCCTCAAGGATATGCAGCCGCCCAGAAGTCATTTGCATCTaGCTTCTCATGACTTCCATCTCCAGGCCATTGAGCTCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SWSSRICSRPEVICI*LLMTSISRPLSSSR Trigger: CCTGGAAGAGCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 90 bp | GTGGCATCCTGGTCCTCAAGGATATGCAGCCGCCCAGAAGTCATTTaGATCTGCCTTCTCATGACTTCCATCTCCAGGCCATTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VASWSSRICSRPEVI*ICLLMTSISRPLSS Trigger: AGAGCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAGGATGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGGTAGTAATACCTAATGCTGGTGTTTCTGTCATGGCTGGTACCATCTCCATCTCCAGGCCATaGAGCTCTTCCAGGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: QRQVVIPNAGVSVMAGTISISRP*SSSRPI Trigger: GATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGGA...GATGGTACCAGCCATGACAGAAACACCAGCATTAGGTATTACTACCTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 90 bp | CATGACTTCCATCTCCAGGCCATTGAGCTCTTCCAGGCCAATCTTTaGCATTATATCTGCCTCCAGACACTCATAAGGGAATCTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: HDFHLQAIELFQANL*HYICLQTLIRESPH Trigger: GTGGGGAGATTCCCTTATGAGTGTCTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGGAAGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCTTCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGGATACATCCATCTCCAGGCCATaGAGCTCTTCCAGGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: MFFKQRLEWYGNNQGRDTSISRP*SSSRPI Trigger: GATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGGA...TGTATCCCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGAAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CAA 90 bp | AATCAAGGGAGGGATACAAAGCCAAACCCTACTCACAGAAGATGGAAGAGAAGACCGCCCAGAAGTCATTaGCATCTGCCTTCTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: NQGRDTKPNPTHRRWKRRPPRSH*HLPSHD Trigger: GTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGG...TCTTCTCTTCCATCTTCTGTGAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS-3UTR CAA 90 bp | TTGAGCATGTTCTTCAAGCAAAGGCTTGAGTGGTATGGAAACAATCAAGGGAGGCCGCCCAGAAGTCATTaGCATCTGCCTTCTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: LSMFFKQRLEWYGNNQGRPPRSH*HLPSHD Trigger: GTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGG...CCTCCCTTGATTGTTTCCATACCACTCAAGCCTTTGCTTGAAGAACATGCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS CAA 90 bp | GGTGGCATCCTGGTCCTCAAGGATATGCAGCCGCCCAGAAGTCATTaGCATCTGCCTTCTCATGACTTCCATCTCCAGGCCATTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGILVLKDMQPPRSH*HLPSHDFHLQAIEL Trigger: GAGCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAGGATGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 72 bp | TTATGGCACCAGGTGGCATCCTGGTCCTCAAGGATATaGAGCCGCCCAGAAGTCATTTGCATCTGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LWHQVASWSSRI*SRPEVICICLL Trigger: GAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAGGATGCCACCTGGTGCCATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS CAA 72 bp | CTGGTCCTCAAGGATATGCAGCCGCCCAGAAGTCATTaGCATCTGCCTTCTCATGACTTCCATCTCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVLKDMQPPRSH*HLPSHDFHLQA Trigger: GGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 72 bp | TGGTCCTCAAGGATATGCAGCCGCCCAGAAGTCATTTaGATCTGCCTTCTCATGACTTCCATCTCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WSSRICSRPEVI*ICLLMTSISRP Trigger: TGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGAGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS TCA 72 bp | GGGAATCTCCCCACTGGGAAGTTTCGAGAAAACTCCTaGAGCTGGACATCATCATGGCTATGCTCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GNLPTGKFRENS*SWTSSWLCSLG Trigger: GCCAAGAGAGCATAGCCATGATGATGTCCAGCTTCAGGAGTTTTCTCGAAACTTCCCAGTGGGGAGATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 72 bp | TCAAGGATATGCAGCCGCCCAGAAGTCATTTGCATCTaGCTTCTCATGACTTCCATCTCCAGGCCATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRICSRPEVICI*LLMTSISRPLS Trigger: GCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTCTGGGCGGCTGCATATCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS CCA 72 bp | ATCTGCCTCCAGACACTCATAAGGGAATCTCCCCACTaGGAAGTTTCGAGAAAACTCCTGAAGCTGGACATC | + |
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Preference number: 6 (lower is better) Translates to: ICLQTLIRESPH*EVSRKLLKLDI Trigger: GATGTCCAGCTTCAGGAGTTTTCTCGAAACTTCCCAGTGGGGAGATTCCCTTATGAGTGTCTGGAGGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 72 bp | ATTGAGCTCTTCCAGGCCAATCTTTGCCATTATATCTaGCTCCAGACACTCATAAGGGAATCTCCCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: IELFQANLCHYI*LQTLIRESPHW Trigger: CCAGTGGGGAGATTCCCTTATGAGTGTCTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAAGAGCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS GCA 72 bp | CATCTCCAGGCCATTGAGCTCTTCCAGGCCAATCTTTaGCATTATATCTGCCTCCAGACACTCATAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HLQAIELFQANL*HYICLQTLIRE Trigger: TTCCCTTATGAGTGTCTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS CAA 90 bp | GAAGTCATTTGCATCTGCCTTCTCATGACTTCCATCTCCAGGCCATaGAGCTCTTCCAGGCCAATCTTTGCCATTATATCTGCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EVICICLLMTSISRP*SSSRPIFAIISASR Trigger: TCTGGAGGCAGATATAATGGCAAAGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCAAATGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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| CDS CAA 72 bp | TGCATCTGCCTTCTCATGACTTCCATCTCCAGGCCATaGAGCTCTTCCAGGCCAATCTTTGCCATTATATCT | + |
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Preference number: 6 (lower is better) Translates to: CICLLMTSISRP*SSSRPIFAIIS Trigger: AGATATAATGGCAAAGATTGGCCTGGAAGAGCTCAATGGCCTGGAGATGGAAGTCATGAGAAGGCAGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066116.8 ENSMUST00000114569.2 |
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