Pregenerated sensors for FAM189B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032657Ensembl transcript IDs: ENSMUST00000041913.13, ENSMUST00000117278.8, ENSMUST00000119707.2, ENSMUST00000127982.8, ENSMUST00000147696.8
Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTGTCCGGTGAGGAGGTCGGTGTCCGGGTGGGGTGAGGGAACCTaGGCTATCACTGAAGCGTCGAGCTGGTGCTCGGGCAGGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: RCPVRRSVSGWGEGT*AITEASSWCSGRRG Trigger: CCCCCTCCTGCCCGAGCACCAGCTCGACGCTTCAGTGATAGCTCAGGTTCCCTCACCCCACCCGGACACCGACCTCCTCACCGGACACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | TCCCGGCTGCCTCCATTGAGGCTGAGGCTGTGTGGGCGGATGCCATaGTCTAGCCTGCGGGCAGACAAGAGTCGCCTTAGGGAGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SRLPPLRLRLCGRMP*SSLRADKSRLREEP Trigger: TGGCTCCTCCCTAAGGCGACTCTTGTCTGCCCGCAGGCTAGAGCATGGCATCCGCCCACACAGCCTCAGCCTCAATGGAGGCAGCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | TGGGCACTGGGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTTaGGGGAAGGGCAGCGGGCTAGACGGAAAAGGCAGGCTTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: WALGGVSRLSEHVAT*GKGSGLDGKGRLQS Trigger: GCTCTGAAGCCTGCCTTTTCCGTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCCCAGTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | CGCCTTAGGGAGGAGCCAGAGCTCAAATCACCACAGCTGCGAAGGTaGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCGCACT | + |
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Preference number: 1 (lower is better) Translates to: RLREEPELKSPQLRR*RLSRPGRPHGLLRT Trigger: AGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGAGCTCTGGCTCCTCCCTAAGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | TTCAAAGGGACCCCGGAGGCCGCAGTCCAGGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGAGCGGAAGAGCACATAATCGACGGA | + |
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Preference number: 1 (lower is better) Translates to: FKGTPEAAVQAKAVA*AAALDGAEEHIIDG Trigger: TCCGTCGATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGCGGCCTCCGGGGTCCCTTTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR CCA 90 bp | CGGGGAGGTCGCCAATGGCAGACAACACCAGGGACCCACTGTCCATaGACACGTCCACAATGGAGGCCACCCGCTCACAGACACAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: RGGRQWQTTPGTHCP*TRPQWRPPAHRHRS Trigger: GCTCCTGTGTCTGTGAGCGGGTGGCCTCCATTGTGGACGTGTCCATGGACAGTGGGTCCCTGGTGTTGTCTGCCATTGGCGACCTCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR CCA 90 bp | CCTAGAGAGTGGGCAGGTGTAGGACCTGAAGGCAGGGGAACCTTCTaGAAGGTGGGCACTGGGCGGCGTTTCTCGGCTGAGCGAGCACGT | + |
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Preference number: 1 (lower is better) Translates to: PREWAGVGPEGRGTF*KVGTGRRFSAERAR Trigger: ACGTGCTCGCTCAGCCGAGAAACGCCGCCCAGTGCCCACCTTCCAGAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCCCACTCTCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | ACAAGAGTCGCCTTAGGGAGGAGCCAGAGCTCAAATCACCACAGCTaGGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: TRVALGRSQSSNHHS*EGGGSLDLVAPMGS Trigger: GGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGAGCTCTGGCTCCTCCCTAAGGCGACTCTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | TGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCGCACTTaGTTATATCCATGGGCTCCAGTTCCTGTAGGGTCTGGAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: WRLSRPGRPHGLLRT*LYPWAPVPVGSGDL Trigger: GAGGTCTCCAGACCCTACAGGAACTGGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | CCATGGGCTCCAGTTCCTGTAGGGTCTGGAGACCTCCTAGACAGCTaGAGGAAACGAGTGACTAGGCCCCGGCCTGGCCAGCTTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PWAPVPVGSGDLLDS*RKRVTRPRPGQLPF Trigger: GAAAGGAAGCTGGCCAGGCCGGGGCCTAGTCACTCGTTTCCTCCAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACTGGAGCCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | CGACCTGGTCGCCCCCATGGGCTCCTGCGCACTTGCTTATATCCATaGGCTCCAGTTCCTGTAGGGTCTGGAGACCTCCTAGACAGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: RPGRPHGLLRTCLYP*APVPVGSGDLLDSW Trigger: CCAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACTGGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | ACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATaGGCTCCTGCGCACTTGCTTATATCCATGGGCTCCAGTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: TTAAKVEALSTWSPP*APAHLLISMGSSSC Trigger: ACAGGAACTGGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | AGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTaGCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RGHFLPHPCSTGQKL*PSERQRQATGALKG Trigger: GCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CCA 90 bp | AGAGCTCAAATCACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTaGTCGCCCCCATGGGCTCCTGCGCACTTGCTTATATCCATGGGC | + |
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Preference number: 1 (lower is better) Translates to: RAQITTAAKVEALST*SPPWAPAHLLISMG Trigger: GCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGAGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR GCA 90 bp | GCTTGGCAAGGCACAAATCGCCGTGTTCTTAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: AWQGTNRRVLKHSGF*PHTVPWNIRKRHSH Trigger: ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTTAAGAACACGGCGATTTGTGCCTTGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCGCACTTGCTTATATGTGCAGCTGAGCGGCTaGCTCCTCGGGGGACCCGCC | + |
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Preference number: 2 (lower is better) Translates to: WRLSRPGRPHGLLRTCLYVQLSG*LLGGPA Trigger: GGCGGGTCCCCCGAGGAGGCAGCCGCTCAGCTGCAC...ATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCGGGGGACCCGCCGCCTCAGCTCGGGGAAACAAGGTCCCACCCAGGGCGGCCCCCATACAGTGCCCTaGAATATCAGAAAGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PRGTRRLSSGKQGPTQGGPHTVP*NIRKRH Trigger: GTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGG...GCCGCCCTGGGTGGGACCTTGTTTCCCCGAGCTGAGGCGGCGGGTCCCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 90 bp | GTGGGCACTGGGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTaGGGGGAAGGGCAGCGGGCTAGACGGAAAAGGCAGGCTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VGTGRRFSAERARSN*GEGQRARRKRQASE Trigger: CTCTGAAGCCTGCCTTTTCCGTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCCCAGTGCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCGCAGTCCAGGCTAAGGCAGTAGCCTGCGCGGCTGCGCTGGATGGAGCGAGACCTTCCCTTCCATaGAGCACTCTCGGAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EAAVQAKAVACAAALDGARPSLP*STLGSP Trigger: GGGACTTCCGAGAGTGCTCCATGGAAGGGAAGGTCT...CGCTCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGCGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTGGTGCACAGGGCTGCTaGAGGCTGCTGGTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPGAQGC*RLLVLT Trigger: GGTTAGGACCAGCAGCCTTCAGCAGCCCTGTGCACC...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 90 bp | GTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCGCACTaGCTTATATCCATGGGCTCCAGTTCCTGTAGGGTCTGGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: VEALSTWSPPWAPAH*LISMGSSSCRVWRP Trigger: AGGTCTCCAGACCCTACAGGAACTGGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 90 bp | AGTGTAACATGCCCAAATCAGAGCCCAGTCTCCCGGCTGCCTCCATaGAGGCTGAGGCTGTGTGGGCGGATGCCATGCTCTAGCCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: SVTCPNQSPVSRLPP*RLRLCGRMPCSSLR Trigger: CCGCAGGCTAGAGCATGGCATCCGCCCACACAGCCTCAGCCTCAATGGAGGCAGCCGGGAGACTGGGCTCTGATTTGGGCATGTTACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCGGAGGCCGCAGTCCAGGCTAAGGCAGTAGCCTGCGCGGCTGCGCTGGATATTCATGTCTCTTTTTaGCTGCCCTACCACCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TPEAAVQAKAVACAAALDIHVSF*LPYHRL Trigger: CAAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAAT...ATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGCGGCCTCCGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAAATCAGAGCCCAGTCTCCCGGCTGCCTCCATTGAGGCTGAGGCTGTGTCCACAGCTGCGAAGGTaGAGGCTCTCTCGACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CPNQSPVSRLPPLRLRLCPQLRR*RLSRPG Trigger: ACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGG...ACACAGCCTCAGCCTCAATGGAGGCAGCCGGGAGACTGGGCTCTGATTTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCGGCTGAGCGAGCACGTAGCAACTTGGGGGAAGGGCAGCGGGCTAGACTTCCTCCCACACCCATaGAGCACAGGACAGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VSRLSEHVATWGKGSGLDFLPHP*STGQKL Trigger: GAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA...GTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCATGGACACGTCCACAATGGAGGCCACCCGCTCACAGACACAGGAGCCACGTTCAGGGGCAAGCTaGATATGCACCAGATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSMDTSTMEATRSQTQEPRSGAS*ICTRSR Trigger: CCTGGATCTGGTGCATATGCAGCTTGCCCCTGAACG...TGGCTCCTGTGTCTGTGAGCGGGTGGCCTCCATTGTGGACGTGTCCATGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCACCTCCAAGTCCAGCATaGTGTGTAGGAGAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ALPFREAEASNRSPQRQAPPSPA*CVGEEL Trigger: CAGCTCCTCTCCTACACACCATGCTGGACTTGGAGG...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR CAA 90 bp | AAGAGCAGGTTCTTGAGGGCCCCTCTGGCTTCATCACAGGTGGAGTaGAGGGCAACTTTCAGCTCCTGGCCCCATTCTGGGCAAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KSRFLRAPLASSQVE*RATFSSWPHSGQGL Trigger: CAGACCTTGCCCAGAATGGGGCCAGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGAAGCCAGAGGGGCCCTCAAGAACCTGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGCAGCGGGCTAGACGGAAAAGGCAGGCTTCAGAGCAGAGCCCTGTGTCTAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EGQRARRKRQASEQSPVSKSRAS*AFLQER Trigger: TCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTT...AGACACAGGGCTCTGCTCTGAAGCCTGCCTTTTCCGTCTAGCCCGCTGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGTGCACAGGGCTGCTaGAGGCTGCTGGTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: EYRADFFLSQPVVHRAAEGAQGC*RLLVLT Trigger: GGTTAGGACCAGCAGCCTTCAGCAGCCCTGTGCACC...TTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGGAGCGGATTTCTTTTTaGGCCAGCCAGTGGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PSERQRQATGALKGRQERERISF*ASQWCT Trigger: TGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTC...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATGGCAGGTGTAGGACCTaGAGGCAGGGGAACCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QATGALKGRQERNTLGEYGRCRT*RQGNLL Trigger: CAGAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCC...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTTCCTCCCACACCCATaGAGCACAGGACAGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RQATGALKGRQERNTLGEFLPHP*STGQKL Trigger: GAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA...CTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSERQRQATGALKGRQERKHSGF*PHTVPW Trigger: CCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTT...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAAATCAGAGCCCAGTCTCCCGGCTGCCTCCATTGAGGCTGAGGCTGTGTCCCCATACAGTGCCCTaGAATATCAGAAAGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CPNQSPVSRLPPLRLRLCPHTVP*NIRKRH Trigger: GTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGG...ACACAGCCTCAGCCTCAATGGAGGCAGCCGGGAGACTGGGCTCTGATTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 90 bp | AGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCTGCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RQERNTLGEYRADFF*SQPVVHRAAEGCWS Trigger: GGACCAGCAGCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTGGTGCACAGGGCTGCTaGAGGCTGCTGGTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCGAQGC*RLLVLT Trigger: GGTTAGGACCAGCAGCCTTCAGCAGCCCTGTGCACC...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGGGTGCACAGGGCTGCTaGAGGCTGCTGGTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMGAQGC*RLLVLT Trigger: GGTTAGGACCAGCAGCCTTCAGCAGCCCTGTGCACC...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAATTCATGTCTCTTTTTaGCTGCCCTACCACCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: ALPFREAEASNRSPQRQAIHVSF*LPYHRL Trigger: CAAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAAT...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTAACCGGTGGCAACTaGGAGCAGCTGTGGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCLTGGN*EQLWGH Trigger: GTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAG...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGCCCCATACAGTGCCCTaGAATATCAGAAAGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FLPHPCSTGQKLCPSERQPHTVP*NIRKRH Trigger: GTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGG...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCATTTGCCCCCATACAGTaGCCTGGAATATCAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ALPFREAEASNRSPQRQAFAPIQ*PGISER Trigger: TCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAA...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTaGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RQATGALKGRQERNT*GEYRADFFLSQPVV Trigger: CACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTCATCACAGGTGGAGTTaGGGGCAACTTTCAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EPSKAGRKGTPWESIERIHHRWS*GQLSAP Trigger: AGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATG...AATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCCGCGGCTGCGCTGGATaGAGCGGAAGAGCACATAAT | + |
|
Preference number: 2 (lower is better) Translates to: EVMQLEVAKLKSHLDSCLRGCAG*SGRAHN Trigger: ATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCG...GAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCATTCCTCCCACACCCATaGAGCACAGGACAGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGPNQLMLMGSSIALICSFLPHP*STGQKL Trigger: GAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATCCCCATACAGTGCCCTaGAATATCAGAAAGAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QATGALKGRQERNTLGEYPHTVP*NIRKRH Trigger: GTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGG...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCTTCCTCCCACACCCATaGAGCACAGGACAGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ARGGKAEKPPRFMSLFACFLPHP*STGQKL Trigger: GAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA...GCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GGKAEKPPRFMSLFACPTKHSGF*PHTVPW Trigger: CCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTT...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AGPNQLMLMGSSIALICSKHSGF*PHTVPW Trigger: CCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTT...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCAAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPEVMQLEVAKLKSHLDSKHSGF*PHTVPW Trigger: CCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTT...TGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCAATTCATGTCTCTTTTTaGCTGCCCTACCACCGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LRLLPPYSALEYQKEALSIHVSF*LPYHRL Trigger: CAAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAAT...TGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTGAGGGTACAGATTATTaGAGCACAAATGGTAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EPSKAGRKGTPWESIERIEGTDY*STNGKA Trigger: GGCCTTACCATTTGTGCTGCAATAATCTGTACCCTC...AATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTGAGGGTCAAACAGAGTaGCCTGGCTGTCTCTTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: VMQLEVAKLKSHLDSCLFEGQTE*PGCLFA Trigger: TGCGAAGAGACAGCCAGGCCACTCTGTTTGACCCTC...AAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCAGTTCCTGTAGGGTCTaGAGACCTCCTAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ARGGKAEKPPRFMSLFACSSCRV*RPPRQL Trigger: CAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACT...GCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGCTTCTTCCTCAAGCACTTTGGTATAAAGGTCCCTGAAGTCAGCGATGTCATTCATGTCTCTTTTTaGCTGCCCTACCACCGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSFFLKHFGIKVPEVSDVIHVSF*LPYHRL Trigger: CAAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAAT...GACATCGCTGACTTCAGGGACCTTTATACCAAAGTGCTTGAGGAAGAAGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATCTGTTCAGTGTAACATaGCCAAATCAGAGCCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDLFSVT*PNQSPV Trigger: GACTGGGCTCTGATTTGGGCATGTTACACTGAACAG...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTTGGGGCTTCAGGGGCTaGGCAGGAATAGGAGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVWGFRG*AGIGAG Trigger: GCCCGCTCCTATTCCTGCTCAGCCCCTGAAGCCCCA...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTTTGCCCCCATACAGTaGCCTGGAATATCAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDFAPIQ*PGISER Trigger: TCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAA...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTGGAGCCATTATACGTaGTGCTTTGTGCATCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VMQLEVAKLKSHLDSCLFWSHYT*CFVHLS Trigger: AGACAGATGCACAAAGCATCACGTATAATGGCTCCA...AAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR CAA 90 bp | CATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTAAATAACTaGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: HVHNVLQVRQLRLNN*PEVMQLEVAKLKSH Trigger: GTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTTATTTAACCTTAATTGCCTGACCTGTAAAACATTGTGAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTATTTTCCTCTGTCAATaGTGTAAGCAGGGGGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVIFLCQ*CKQGAF Trigger: AAATGCCCCCTGCTTACAGCATTGACAGAGGAAAAT...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | CAAGGTCCCACCCAGGGCGGCCAGCCTTCTAACCGGTaGCAACTGCGAGCAGCTGTGGGGGCACCCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QGPTQGGQPSNR*QLRAAVGAPSG Trigger: CCCACTGGGTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAGAAGGCTGGCCGCCCTGGGTGGGACCTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR CCA 72 bp | GCAGGAATAGGAGCGGGCAGCCCGTGGGGGTCGCCTTaGCAAGGGACTGTCTTCAAAGGGACCCCGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGIGAGSPWGSP*QGTVFKGTPEA Trigger: GGCCTCCGGGGTCCCTTTGAAGACAGTCCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCCTATTCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR GCA 72 bp | ACCCCGGAGGCCGCAGTCCAGGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGAGCGGAAGAGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: TPEAAVQAKAVA*AAALDGAEEHI Trigger: TATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGCGGCCTCCGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR CCA 72 bp | GGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTTaGGGGAAGGGCAGCGGGCTAGACGGAAAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGVSRLSEHVAT*GKGSGLDGKGR Trigger: CCTGCCTTTTCCGTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR GCA 72 bp | GCCTTAGGGAGGAGCCAGAGCTCAAATCACCACAGCTaGGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ALGRSQSSNHHS*EGGGSLDLVAP Trigger: GGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGAGCTCTGGCTCCTCCCTAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | GCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATaGGCTCCTGCGCACTTGCTTATATCCATGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AKVEALSTWSPP*APAHLLISMGS Trigger: GGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGAAGAGCAGGTTCTaGAGGGCCCCTCTGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPQLRRWRLSRPGRPHGLLKSRF*RAPLAS Trigger: TGAAGCCAGAGGGGCCCTCAAGAACCTGCTCTTCAG...GAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR GCA 72 bp | GGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTaGGCACTTGCTTATATCCATGGGCTCCAGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGSLDLVAPMGS*ALAYIHGLQFL Trigger: CAGGAACTGGAGCCCATGGATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR GCA 72 bp | CCTCCATTGAGGCTGAGGCTGTGTGGGCGGATGCCATaGTCTAGCCTGCGGGCAGACAAGAGTCGCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPLRLRLCGRMP*SSLRADKSRLR Trigger: CCTAAGGCGACTCTTGTCTGCCCGCAGGCTAGAGCATGGCATCCGCCCACACAGCCTCAGCCTCAATGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | CGGCCTGGCCAGCTTCCTTTCAGGTCCCCTAGAGAGTaGGCAGGTGTAGGACCTGAAGGCAGGGGAACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPGQLPFRSPRE*AGVGPEGRGTF Trigger: GAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCCCACTCTCTAGGGGACCTGAAAGGAAGCTGGCCAGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | CCAGTTCCTGTAGGGTCTGGAGACCTCCTAGACAGCTaGAGGAAACGAGTGACTAGGCCCCGGCCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PVPVGSGDLLDS*RKRVTRPRPGQ Trigger: CTGGCCAGGCCGGGGCCTAGTCACTCGTTTCCTCCAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | ATCACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTaGTCGCCCCCATGGGCTCCTGCGCACTTGCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: ITTAAKVEALST*SPPWAPAHLLI Trigger: TATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGAFPPTPMQHRTEALPFRADFF*SQPVVH Trigger: GTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCT...GAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCACGTAGCAACTTGGGGGAAGGGCAGCGGGCTAGACGGAAAAGGCAGGCTTAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EHVATWGKGSGLDGKGRLRADFF*SQPVVH Trigger: GTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCT...AAGCCTGCCTTTTCCGTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGATTCATGTCTCTTTTaGCCTGCCCTACCACCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALPFREAEASNRSPQRQADSCLF*PALPPL Trigger: AAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATC...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR TCA 72 bp | CCTTCCATGGAGCACTCTCGGAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGAACAGAGCCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PSMEHSRKSRAS*AFLQERTEPAM Trigger: CATGGCTGGCTCTGTTCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTTCCGAGAGTGCTCCATGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGGATTCATGTCTCTTTTaGCCTGCCCTACCACCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLPHPCSTGQKLCPSERQDSCLF*PALPPL Trigger: AAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATC...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR CCA 72 bp | TCATCACAGGTGGAGTTGAGGGCAACTTTCAGCTCCTaGCCCCATTCTGGGCAAGGTCTGTGTAGGGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SSQVELRATFSS*PHSGQGLCRGI Trigger: TATCCCCCTACACAGACCTTGCCCAGAATGGGGCCAGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EYRADFFLSQPVVHRAAERADFF*SQPVVH Trigger: GTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCT...TTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDRADFF*SQPVVH Trigger: GTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCT...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCAGGAAAGGAACACCTaGGGAGAGTATAGAGCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSQERNT*GEYRAD Trigger: ATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTG...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGATTCATGTCTCTTTTaGCCTGCCCTACCACCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGPNQLMLMGSSIALICSDSCLF*PALPPL Trigger: AAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATC...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR GCA 72 bp | GTGTTCTTAAACACTCAGGCTTTTGCCCCCATACAGTaGCCTGGAATATCAGAAAGAGGCACTCTCATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: VFLNTQAFAPIQ*PGISERGTLMR Trigger: CCGCATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTTAAGAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| 3UTR GCA 72 bp | GGCACAAATCGCCGTGTTCTTAAACACTCAGGCTTTTaGCCCCATACAGTGCCCTGGAATATCAGAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTNRRVLKHSGF*PHTVPWNIRKR Trigger: CCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTTTAAGAACACGGCGATTTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGGGACCCGCCGCCTCAGCTCGGGGAAACAAGGTCCCACCCAGGGCGGCGGAGCGGGCAGCCCGTaGGGGTCGCCTTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGTRRLSSGKQGPTQGGGAGSP*GSPWQG Trigger: CCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCC...GCCGCCCTGGGTGGGACCTTGTTTCCCCGAGCTGAGGCGGCGGGTCCCCCGAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGCAGTCCAGGCTAAGGCAGTAGCCTGCGCGGCTGCGCTGGATGGAGCGGGGCCAGCCCCAACGTaGGCAGGGCCTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAVQAKAVACAAALDGAGPAPT*AGPGAR Trigger: CCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCC...CGCTCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGCGGCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACCCGCCGCCTCAGCTCGGGGAAACAAGGTCCCACCCAGGGCGGCCAGCCCCCCTTGCCACAGGATaGACCCAGCCCTGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDPPPQLGETRSHPGRPAPLATG*TQPCKE Trigger: CTCCTTGCAGGGCTGGGTGCATCCTGTGGCAAGGGG...GGCTGGCCGCCCTGGGTGGGACCTTGTTTCCCCGAGCTGAGGCGGCGGGTCCCC 71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGGGACCCGCCGCCTCAGCTCGGGGAAACAAGGTCCCACCCAGGGCGGCATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRGTRRLSSGKQGPTQGGMPKST*ASPNVS Trigger: GCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCAT...GCCGCCCTGGGTGGGACCTTGTTTCCCCGAGCTGAGGCGGCGGGTCCCCCGAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCTCGGGGGACCCGCCGCCTCAGCTCGGGGAAACAAGGTCCCACCCAGAACGTGAGCAGGGCCTaGAGCCAGGGTCGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPRGTRRLSSGKQGPTQNVSRA*SQGRWR Trigger: CCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTT...CTGGGTGGGACCTTGTTTCCCCGAGCTGAGGCGGCGGGTCCCCCGAGGAGGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTAGGAGGGGGTGCAGCTaGGCGGCTGCCTCCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPRRGCS*AAASSG Trigger: CCCCGAGGAGGCAGCCGCTCAGCTGCACCCCCTCCT...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGGGAGCGGGCAGCCCGTaGGGGTCGCCTTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQGAGSP*GSPWQG Trigger: CCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCC...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| 3UTR CAA 72 bp | AGCAGGAATAGGAGCGGGCAGCCCGTGGGGGTCGCCTaGGCAAGGGACTGTCTTCAAAGGGACCCCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRNRSGQPVGVA*ARDCLQRDPGG Trigger: GCCTCCGGGGTCCCTTTGAAGACAGTCCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCCTATTCCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTTGGGGGAAGGGTGCTCTCGGTGGTGGTaGCAGAGGAGGCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGRRFSAERARSNLGEGCSRWW*QRRPPC Trigger: GCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCA...CCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCCCAGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TCACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCTGGTCAGCGAGCGACTaGAGTCACTGGGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPQLRRWRLSRPGRPHGLWSASD*SHWARA Trigger: TGCCCTCGCCCAGTGACTCCAGTCGCTCGCTGACCA...GAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCAGCTAGGGACAGAGTaGGCACAGGCTCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRRWRLSRPGRPHGLLQLGTE*AQAQLG Trigger: GCCAAGCTGAGCCTGTGCCCACTCTGTCCCTAGCTG...CAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| 3UTR CAA 72 bp | GGGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTaGGGGGAAGGGCAGCGGGCTAGACGGAAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRRFSAERARSN*GEGQRARRKRQ Trigger: CTGCCTTTTCCGTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGCGGTGGAGGCGGAGGTaGGTAAGGCCCCGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQRWRRR*VRPRVL Trigger: CAGTACCCGGGGCCTTACCCACCTCCGCCTCCACCG...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGGGCCAGCCCCAACGTaGGCAGGGCCTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTEGPAPT*AGPGAR Trigger: CCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCC...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCTGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGAFPPTPMQHRTEALPFWSQGR*RRRWVR Trigger: CCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCA...GAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGTGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQWSQGR*RRRWVR Trigger: CCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCA...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAACGTGAGCAGGGCCTaGAGCCAGGGTCGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQNVSRA*SQGRWR Trigger: CCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTT...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGGCGGCGTTTCTCGGCTGAGCGAGCACGTAGCAACTTGGGGGAAGGGCAGCGGAGACCTTCCCTTCCATaGAGCACTCTCGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRFSAERARSNLGEGQRRPSLP*STLGSP Trigger: GGGACTTCCGAGAGTGCTCCATGGAAGGGAAGGTCT...CCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAACGCCGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGAAGCGTCGAGCTGGTGCTCGGGCAGGAGGGGGTGCAGCTGAGCGGCTGCCTCCAAGTCCAGCATaGTGTGTAGGAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRAGARAGGGAAERLPPSPA*CVGEEL Trigger: CAGCTCCTCTCCTACACACCATGCTGGACTTGGAGG...CAGCCGCTCAGCTGCACCCCCTCCTGCCCGAGCACCAGCTCGACGCTTCAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAAACTGCGAGCAGCTGTaGGGGCACCCAGTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPFREAEASNRSPQRQANCEQL*GHPVGV Trigger: CACCCCCACTGGGTGCCCCCACAGCTGCTCGCAGTT...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCGGCAGGGGAACCTTCTaGAAGGTGGGCACTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGAFPPTPMQHRTEALPFGRGTF*KVGTGR Trigger: CCGCCCAGTGCCCACCTTCCAGAAGGTTCCCCTGCC...GAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTGCTCTCGGTGGTGGTaGCAGAGGAGGCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPCSRWW*QRRPPC Trigger: GCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCA...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCAGGCTAAGGCAGTAGCCTGCGCGGCTGCGCTGGATGGAGCGGAAGAGGCTTCCAGGACACAATaGCAACCAACCCGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: AVQAKAVACAAALDGAEEASRTQ*QPTRRT Trigger: CGTTCTCCGGGTTGGTTGGCATTGTGTCCTGGAAGC...CTCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGCCTGGACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGTAGCCTGCGCGGCTaGGCTGGATGGAGCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQSSLRG*AGWSGR Trigger: TCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACT...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPAKAVA*AAALDG Trigger: TCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGC...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGGGGTACTGGGCCGGCTaGTCAGCGAGCGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSERQRQATGALKGRQERGYWAG*SASDWS Trigger: ACTCCAGTCGCTCGCTGACCAGCCGGCCCAGTACCC...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGTGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSERQRQATGALKGRQERWSQGR*RRRWVR Trigger: CCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCA...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTAGGAGGGGGTGCAGCTaGGCGGCTGCCTCCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSKAGRKGTPWESIERISRRGCS*AAASSG Trigger: CCCCGAGGAGGCAGCCGCTCAGCTGCACCCCCTCCT...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAGTAGCCTGCGCGGCTaGGCTGGATGGAGCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSERQRQATGALKGRQERSSLRG*AGWSGR Trigger: TCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACT...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSERQRQATGALKGRQERAKAVA*AAALDG Trigger: TCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGC...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCGCAGAGCCCTGTGTCTaGAGAGGAGACAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGAFPPTPMQHRTEALPFAEPCV*RGDRGS Trigger: GCTGCCTCTGTCTCCTCTGCAGACACAGGGCTCTGC...GAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGTGCCATGCTCTAGCCTaGGGGCAGACAAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQCHALA*GQTRVA Trigger: GGCGACTCTTGTCTGCCCGCAGGCTAGAGCATGGCA...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGGGATGCACCCAGCCCTaGAAGGAGGGAGAGGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHPCSTGQKLCPSERQGCTQP*KEGEDE Trigger: CTCGTCCTCTCCCTCCTTGCAGGGCTGGGTGCATCC...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGGGGTACTGGGCCGGCTaGTCAGCGAGCGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQATGALKGRQERNTLGEGYWAG*SASDWS Trigger: ACTCCAGTCGCTCGCTGACCAGCCGGCCCAGTACCC...CTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAACGGTGGAGGCGGAGGTaGGTAAGGCCCCGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTERWRRR*VRPRVL Trigger: CAGTACCCGGGGCCTTACCCACCTCCGCCTCCACCG...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGGAGCGCACAGAGCCCTaGAGTTCCAGCAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQERTEP*SSSRHE Trigger: CTCATGCCTGCTGGAACTCCAGGGCTCTGTGCGCTC...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAATGGGGCTTCAGGGGCTaGGCAGGAATAGGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTEWGFRG*AGIGAG Trigger: GCCCGCTCCTATTCCTGCTCAGCCCCTGAAGCCCCA...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGGTGTGTAGGAGAGGAGCTGGAGGCGAGGATGTACACGCCAGGGGCCCTAGGTTATCACCAGGATaGCCAAGAGCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVCRRGAGGEDVHARGPRLSPG*PRAPGP Trigger: TGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCT...AGGGCCCCTGGCGTGTACATCCTCGCCTCCAGCTCCTCTCCTACACACCATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTGTGCAGCTGAGCGGCTaGCTCCTCGGGGGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCVQLSG*LLGGPA Trigger: GGCGGGTCCCCCGAGGAGGCAGCCGCTCAGCTGCAC...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCAGTGCAGCTGAGCGGCTaGCTCCTCGGGGGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPEVMQLEVAKLKSHLDSVQLSG*LLGGPA Trigger: GGCGGGTCCCCCGAGGAGGCAGCCGCTCAGCTGCAC...TGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGTGGTGCAGCTGAGCGGCTaGCTCCTCGGGGGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPNQLMLMGSSIALICSVVQLSG*LLGGPA Trigger: GGCGGGTCCCCCGAGGAGGCAGCCGCTCAGCTGCAC...CACTGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGGGTACTGGGCCGGCTaGTCAGCGAGCGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTEGYWAG*SASDWS Trigger: ACTCCAGTCGCTCGCTGACCAGCCGGCCCAGTACCC...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQATGALKGRQERNTLGEMPKST*ASPNVS Trigger: GCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCAT...CTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTCGCGGCTGCGCTGGATaGAGCGGAAGAGCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPRGCAG*SGRAHN Trigger: ATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCG...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTCTCTCGACCTGGTCGCCCCCATGGGCTCCTGCGCACTTGCTTATATCGCGGCTGCGCTGGATaGAGCGGAAGAGCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: WRLSRPGRPHGLLRTCLYRGCAG*SGRAHN Trigger: ATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCG...ATATAAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGTCGAGAGAGCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGGAGCGGGCAGCCCGTaGGGGTCGCCTTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSGAGSP*GSPWQG Trigger: CCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCC...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATGGAGCGGGCAGCCCGTaGGGGTCGCCTTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDGAGSP*GSPWQG Trigger: CCCTTGCCAAGGCGACCCCCACGGGCTGCCCGCTCC...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGCCACAGCTGCGAAGGTaGAGGCTCTCTCGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHPCSTGQKLCPSERQPQLRR*RLSRPG Trigger: ACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGG...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCAGGGCCAGCCCCAACGTaGGCAGGGCCTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAKLKSHLDSCLFLPALPGPAPT*AGPGAR Trigger: CCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCC...TGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCGGGCCAGCCCCAACGTaGGCAGGGCCTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFAGPAPT*AGPGAR Trigger: CCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCC...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCACCACAGCTGCGAAGGTGGAGGCTCTCTCGACCTGGTCGCCCCCATGGAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QITTAAKVEALSTWSPPWKSRAS*AFLQER Trigger: TCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTT...CCATGGGGGCGACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCAGGAGGGGGTGCAGCTaGGCGGCTGCCTCCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFARRGCS*AAASSG Trigger: CCCCGAGGAGGCAGCCGCTCAGCTGCACCCCCTCCT...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTGCTGGAGGAAACGAGTaGCTAGGCCCCGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSAGGNE*LGPGLA Trigger: GGCCAGGCCGGGGCCTAGTCACTCGTTTCCTCCAGC...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGCTGGAGGAAACGAGTaGCTAGGCCCCGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQQEPSKAGRKGTPWESIAGGNE*LGPGLA Trigger: GGCCAGGCCGGGGCCTAGTCACTCGTTTCCTCCAGC...TATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAAGGTTATCACCAGGATaGCCAAGAGCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPFREAEASNRSPQRQARLSPG*PRAPGP Trigger: TGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCT...TGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGGGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NAVSRGHFLPHPCSTGQKAKAVA*AAALDG Trigger: TCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGC...CTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTAACCGGTGGCAACTaGGAGCAGCTGTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NAVSRGHFLPHPCSTGQKLTGGN*EQLWGH Trigger: GTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAG...CTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAACTGCGAGCAGCTGTaGGGGCACCCAGTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYNCEQL*GHPVGV Trigger: CACCCCCACTGGGTGCCCCCACAGCTGCTCGCAGTT...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATGGGCAGCAGCAGTGGTaGAGGAGGTGTCCGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYGQQQW*RRCPVR Trigger: CCTCACCGGACACCTCCTCCACCACTGCTGCTGCCC...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCGGGCAGCAGCAGTGGTaGAGGAGGTGTCCGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGGQQQW*RRCPVR Trigger: CCTCACCGGACACCTCCTCCACCACTGCTGCTGCCC...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | AATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGACCTGGTCGCCCCCATaGGCTCCTGCGCACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NAVSRGHFLPHPCSTGQKTWSPP*APAHLL Trigger: AAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGT...CTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGAGGAGGCCACCATGCTaGAGGTTATCACCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHPCSTGQKLCPSERQRRPPC*RLSPGC Trigger: GCATCCTGGTGATAACCTTCAGCATGGTGGCCTCCT...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCGGCTGAGCGAGCACGTAGCAACTTGGGGGAAGGGCAGCGGGCTAGACTTGTGCATCTGTCTCTaGACTGCAGGTGTACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRLSEHVATWGKGSGLDLCICL*TAGVLW Trigger: CCAGAGTACACCTGCAGTTCAGAGACAGATGCACAA...GTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATGGGGCTTCAGGGGCTaGGCAGGAATAGGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLPPYSALEYQKEALSWGFRG*AGIGAG Trigger: GCCCGCTCCTATTCCTGCTCAGCCCCTGAAGCCCCA...TGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCGCTGGAGGAAACGAGTaGCTAGGCCCCGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKAEKPPRFMSLFACPTAGGNE*LGPGLA Trigger: GGCCAGGCCGGGGCCTAGTCACTCGTTTCCTCCAGC...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTGGGTACTGGGCCGGCTaGTCAGCGAGCGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSGYWAG*SASDWS Trigger: ACTCCAGTCGCTCGCTGACCAGCCGGCCCAGTACCC...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCGGTGGAGGCGGAGGTaGGTAAGGCCCCGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCRWRRR*VRPRVL Trigger: CAGTACCCGGGGCCTTACCCACCTCCGCCTCCACCG...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCAAACTGCGAGCAGCTGTaGGGGCACCCAGTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLPPYSALEYQKEALSNCEQL*GHPVGV Trigger: CACCCCCACTGGGTGCCCCCACAGCTGCTCGCAGTT...TGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTGGCAGGGGAACCTTCTaGAAGGTGGGCACTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSKAGRKGTPWESIERISGRGTF*KVGTGR Trigger: CCGCCCAGTGCCCACCTTCCAGAAGGTTCCCCTGCC...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGGCAGGGGAACCTTCTaGAAGGTGGGCACTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRAGRGTF*KVGTGR Trigger: CCGCCCAGTGCCCACCTTCCAGAAGGTTCCCCTGCC...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGGACCTCCTAGACAGCTaGAGGAAACGAGTGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGISSHTHAAQDRSSALQDLLDS*RKRVTR Trigger: CCTAGTCACTCGTTTCCTCCAGCTGTCTAGGAGGTC...CTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCGGCTGAGCGAGCACGTAGCAACTTGGGGGAAGGGCAGCGGGCTAGACGAGGGTCAAACAGAGTaGCCTTTGTGCATCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSRLSEHVATWGKGSGLDEGQTE*PLCICL Trigger: GAGACAGATGCACAAAGGCCACTCTGTTTGACCCTC...GTCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCGCTCAGCCGAGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
||
| 3UTR CAA 72 bp | TTCTTGAGGGCCCCTCTGGCTTCATCACAGGTGGAGTaGAGGGCAACTTTCAGCTCCTGGCCCCATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRAPLASSQVE*RATFSSWPHSG Trigger: CCCAGAATGGGGCCAGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGAAGCCAGAGGGGCCCTCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGTGTGGGGCTTCAGGGGCTaGGCAGGAATAGGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPNQLMLMGSSIALICSVWGFRG*AGIGAG Trigger: GCCCGCTCCTATTCCTGCTCAGCCCCTGAAGCCCCA...CACTGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTGGGGCTTCAGGGGCTaGGCAGGAATAGGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVMQLEVAKLKSHLDSCLWGFRG*AGIGAG Trigger: GCCCGCTCCTATTCCTGCTCAGCCCCTGAAGCCCCA...GAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCGGCAGGTGTAGGACCTaGAGGCAGGGGAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGGRCRT*RQGNLL Trigger: CAGAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCC...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTGCTAAGGCAGTAGCCTaGGCGGCTGCGCTGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSKAGRKGTPWESIERISAKAVA*AAALDG Trigger: TCCATCCAGCGCAGCCGCGCAGGCTACTGCCTTAGC...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATGCAGAGCCCTGTGTCTaGAGAGGAGACAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYAEPCV*RGDRGS Trigger: GCTGCCTCTGTCTCCTCTGCAGACACAGGGCTCTGC...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTTGGTCAGCGAGCGACTaGAGTCACTGGGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRAWSASD*SHWARA Trigger: TGCCCTCGCCCAGTGACTCCAGTCGCTCGCTGACCA...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAATGGTCAGCGAGCGACTaGAGTCACTGGGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EYRADFFLSQPVVHRAAEWSASD*SHWARA Trigger: TGCCCTCGCCCAGTGACTCCAGTCGCTCGCTGACCA...TTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTGGGTACTGGGCCGGCTaGTCAGCGAGCGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTQAFAPIQCPGISERGTGYWAG*SASDWS Trigger: ACTCCAGTCGCTCGCTGACCAGCCGGCCCAGTACCC...AGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCGGTGGAGGCGGAGGTaGGTAAGGCCCCGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ARGGKAEKPPRFMSLFACRWRRR*VRPRVL Trigger: CAGTACCCGGGGCCTTACCCACCTCCGCCTCCACCG...GCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCATGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSWSQGR*RRRWVR Trigger: CCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCA...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGTGAACGTGAGCAGGGCCTaGAGCCAGGGTCGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPNQLMLMGSSIALICSVNVSRA*SQGRWR Trigger: CCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTT...CACTGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTGCTGAAGGCTGCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLKAAGPNQLMLMGSSEPSPR*AGPLDA Trigger: AGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTC...GCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGCAGCCTTCAGCAGCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTGCTGAAGGCTGCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCAGACCTTCCCTTCCATaGAGCACTCTCGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLKAAGPNQLMLMGSSRPSLP*STLGSP Trigger: GGGACTTCCGAGAGTGCTCCATGGAAGGGAAGGTCT...GCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGCAGCCTTCAGCAGCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGGGTAGTAGGGTGGTaGGGGCACAGGCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYRVVGW*GHRRDK Trigger: TTTGTCCCGCCTGTGCCCCCACCACCCTACTACCCT...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATGAGCGCACAGAGCCCTaGAGTTCCAGCAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYERTEP*SSSRHE Trigger: CTCATGCCTGCTGGAACTCCAGGGCTCTGTGCGCTC...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTGAGCGCACAGAGCCCTaGAGTTCCAGCAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSKAGRKGTPWESIERIERTEP*SSSRHE Trigger: CTCATGCCTGCTGGAACTCCAGGGCTCTGTGCGCTC...AATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCAAACTGCGAGCAGCTGTaGGGGCACCCAGTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPEVMQLEVAKLKSHLDSNCEQL*GHPVGV Trigger: CACCCCCACTGGGTGCCCCCACAGCTGCTCGCAGTT...TGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATGGGCAGCAGCAGTGGTaGAGGAGGTGTCCGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGFCPHTVPWNIRKRHSHGQQQW*RRCPVR Trigger: CCTCACCGGACACCTCCTCCACCACTGCTGCTGCCC...ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAAGGAGGCCACCATGCTaGAGGTTATCACCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTERRPPC*RLSPGC Trigger: GCATCCTGGTGATAACCTTCAGCATGGTGGCCTCCT...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCTGCTCTCGGTGGTGGTaGCAGAGGAGGCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKAEKPPRFMSLFACPTCSRWW*QRRPPC Trigger: GCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCA...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTTCTTCCTCAAGCACTTTGGTATAAAGGTCCCTGAAGTCAGCGATGTCTGCTCTCGGTGGTGGTaGCAGAGGAGGCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFFLKHFGIKVPEVSDVCSRWW*QRRPPC Trigger: GCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCA...GACATCGCTGACTTCAGGGACCTTTATACCAAAGTGCTTGAGGAAGAAGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQATGALKGRQERNTLGEKSRAS*AFLQER Trigger: TCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTT...CTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGTTGTGCATCTGTCTCTaGACTGCAGGTGTACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSERQRQATGALKGRQERLCICL*TAGVLW Trigger: CCAGAGTACACCTGCAGTTCAGAGACAGATGCACAA...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTGGGGTGAGGGAACCTaGGCTATCACTGAAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EPSKAGRKGTPWESIERIWGEGT*AITEAS Trigger: CGACGCTTCAGTGATAGCTCAGGTTCCCTCACCCCA...AATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGGCAGGTGTAGGACCTaGAGGCAGGGGAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRAGRCRT*RQGNLL Trigger: CAGAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCC...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTAGTAGCCTGCGCGGCTaGGCTGGATGGAGCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCSSLRG*AGWSGR Trigger: TCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACT...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCTAACCGGTGGCAACTaGGAGCAGCTGTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMLTGGN*EQLWGH Trigger: GTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAG...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCACCGCTAACGTGAGCAGGGCCTaGAGCCAGGGTCGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAEKPPRFMSLFACPTTANVSRA*SQGRWR Trigger: CCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTT...AGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDMPKST*ASPNVS Trigger: GCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCAT...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGFCPHTVPWNIRKRHSHMPKST*ASPNVS Trigger: GCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCAT...ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSMPKST*ASPNVS Trigger: GCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCAT...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGAGGGTCAAACAGAGTaGCCTGGCTGTCTCTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTEEGQTE*PGCLFA Trigger: TGCGAAGAGACAGCCAGGCCACTCTGTTTGACCCTC...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCGGTCGCTGTGAGACCTaGGCAGCAGCAGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVMQLEVAKLKSHLDSCLGRCET*AAAVVE Trigger: CTCCACCACTGCTGCTGCCCAGGTCTCACAGCGACC...GAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGGTCGCTGTGAGACCTaGGCAGCAGCAGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSGRCET*AAAVVE Trigger: CTCCACCACTGCTGCTGCCCAGGTCTCACAGCGACC...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGAGCACGTAGCAACTTaGGGGAAGGGCAGCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EYRADFFLSQPVVHRAAEEHVAT*GKGSGL Trigger: TAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTC...TTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATGAACCTTCTGGAAGGTaGGCACTGGGCGGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYEPSGR*ALGGVS Trigger: AGAAACGCCGCCCAGTGCCCACCTTCCAGAAGGTTC...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTACTTGCTTATATCCATaGGCTCCAGTTCCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGHFLPHPCSTGQKLCPTCLYP*APVPVG Trigger: CCCTACAGGAACTGGAGCCCATGGATATAAGCAAGT...AGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATACCTGGTCGCCCCCATaGGCTCCTGCGCACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDTWSPP*APAHLL Trigger: AAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGT...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTACCTGGTCGCCCCCATaGGCTCCTGCGCACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCTWSPP*APAHLL Trigger: AAGCAAGTGCGCAGGAGCCCATGGGGGCGACCAGGT...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGGAGGCCACCATGCTaGAGGTTATCACCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYRRPPC*RLSPGC Trigger: GCATCCTGGTGATAACCTTCAGCATGGTGGCCTCCT...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATGGCAGGTGTAGGACCTaGAGGCAGGGGAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFCPHTVPWNIRKRHSHGRCRT*RQGNLL Trigger: CAGAAGGTTCCCCTGCCTTCAGGTCCTACACCTGCC...ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCGCAGGTTCACTAGAGTaGATGGCCGCTTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGAGSLE*MAASRT Trigger: TGTCCTGGAAGCGGCCATTCACTCTAGTGAACCTGC...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCGAGGGTACAGATTATTaGAGCACAAATGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGAFPPTPMQHRTEALPFEGTDY*STNGKA Trigger: GGCCTTACCATTTGTGCTGCAATAATCTGTACCCTC...GAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCACCGCTAGTAGCCTGCGCGGCTaGGCTGGATGGAGCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAEKPPRFMSLFACPTTASSLRG*AGWSGR Trigger: TCTTCCGCTCCATCCAGCGCAGCCGCGCAGGCTACT...AGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCACCGCTCTAACCGGTGGCAACTaGGAGCAGCTGTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAEKPPRFMSLFACPTTALTGGN*EQLWGH Trigger: GTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAG...AGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTGCAGAGCCCTGTGTCTaGAGAGGAGACAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCAEPCV*RGDRGS Trigger: GCTGCCTCTGTCTCCTCTGCAGACACAGGGCTCTGC...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTTGCCATGCTCTAGCCTaGGGGCAGACAAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCCHALA*GQTRVA Trigger: GGCGACTCTTGTCTGCCCGCAGGCTAGAGCATGGCA...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCATGCCATGCTCTAGCCTaGGGGCAGACAAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSCHALA*GQTRVA Trigger: GGCGACTCTTGTCTGCCCGCAGGCTAGAGCATGGCA...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAATCAGGGGCAAGCATATaGACCAGATCCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QCCKQGAFPPTPMQHRTESGASI*TRSREK Trigger: CTTCTCCCTGGATCTGGTGCATATGCTTGCCCCTGA...TTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGGTCAGCGAGCGACTaGAGTCACTGGGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFAWSASD*SHWARA Trigger: TGCCCTCGCCCAGTGACTCCAGTCGCTCGCTGACCA...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGATACAAGGGCACTGGGCTATCCATGGAGCCATTATACGTGATGCTTTGTGGTCAGCGAGCGACTaGAGTCACTGGGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRIQGHWAIHGAIIRDALWSASD*SHWARA Trigger: TGCCCTCGCCCAGTGACTCCAGTCGCTCGCTGACCA...CAAAGCATCACGTATAATGGCTCCATGGATAGCCCAGTGCCCTTGTATCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
||
| CDS-3UTR CCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGEPSPR*AGPLDA Trigger: AGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTC...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATCCTCCAAGTCCAGCATaGTGTGTAGGAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QATGALKGRQERNTLGEYPPSPA*CVGEEL Trigger: CAGCTCCTCTCCTACACACCATGCTGGACTTGGAGG...ATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTAGGGTAGTAGGGTGGTaGGGGCACAGGCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTQAFAPIQCPGISERGTRVVGW*GHRRDK Trigger: TTTGTCCCGCCTGTGCCCCCACCACCCTACTACCCT...AGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | GAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCAGGGTAGTAGGGTGGTaGGGGCACAGGCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVMQLEVAKLKSHLDSCLRVVGW*GHRRDK Trigger: TTTGTCCCGCCTGTGCCCCCACCACCCTACTACCCT...GAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATAGGGTAGTAGGGTGGTaGGGGCACAGGCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDRVVGW*GHRRDK Trigger: TTTGTCCCGCCTGTGCCCCCACCACCCTACTACCCT...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCGAGGGTCAAACAGAGTaGCCTGGCTGTCTCTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGEGQTE*PGCLFA Trigger: TGCGAAGAGACAGCCAGGCCACTCTGTTTGACCCTC...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATGAGCGCACAGAGCCCTaGAGTTCCAGCAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDERTEP*SSSRHE Trigger: CTCATGCCTGCTGGAACTCCAGGGCTCTGTGCGCTC...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTGAGCACGTAGCAACTTaGGGGAAGGGCAGCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCEHVAT*GKGSGL Trigger: TAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTC...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATGAGCACGTAGCAACTTaGGGGAAGGGCAGCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGFCPHTVPWNIRKRHSHEHVAT*GKGSGL Trigger: TAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTC...ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCCCACAGCTGCGAAGGTaGAGGCTCTCTCGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGKAEKPPRFMSLFACPTPQLRR*RLSRPG Trigger: ACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGG...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCCACAGCTGCGAAGGTaGAGGCTCTCTCGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCPQLRR*RLSRPG Trigger: ACCAGGTCGAGAGAGCCTCCACCTTCGCAGCTGTGG...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| 3UTR CAA 72 bp | AGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTaGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTLGEYRADFF*SQPVVHRAAEG Trigger: GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCCATCACAGGTGGAGTTaGGGGCAACTTTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGHHRWS*GQLSAP Trigger: AGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATG...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTAGGTTATCACCAGGATaGCCAAGAGCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRARLSPG*PRAPGP Trigger: TGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCT...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTGCTTCCAGGACACAATaGCAACCAACCCGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSASRTQ*QPTRRT Trigger: CGTTCTCCGGGTTGGTTGGCATTGTGTCCTGGAAGC...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTGGGGCAAGCTGCATATaGACCAGATCCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSKAGRKGTPWESIERISGASCI*TRSREK Trigger: CTTCTCCCTGGATCTGGTGCATATGCAGCTTGCCCC...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 |
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| CDS-3UTR GCA 90 bp | AATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCAGCACAGGACAGAAGCATCTGTCTCTGAACTaGAGGTGTACTCTGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NAVSRGHFLPHPCSTGQKHLSLN*RCTLEG Trigger: ACCCTCCAGAGTACACCTGCAGTTCAGAGACAGATG...CTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTCTAACCGGTGGCAACTaGGAGCAGCTGTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFLTGGN*EQLWGH Trigger: GTGCCCCCACAGCTGCTCGCAGTTGCCACCGGTTAG...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGTGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLWSQGR*RRRWVR Trigger: CCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCA...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTAGACCTTCCCTTCCATaGAGCACTCTCGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSRPSLP*STLGSP Trigger: GGGACTTCCGAGAGTGCTCCATGGAAGGGAAGGTCT...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTCCTCCAAGTCCAGCATaGTGTGTAGGAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRAPPSPA*CVGEEL Trigger: CAGCTCCTCTCCTACACACCATGCTGGACTTGGAGG...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATCGCGGCTGCGCTGGATaGAGCGGAAGAGCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDRGCAG*SGRAHN Trigger: ATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCG...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR CCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGCGCGGCTGCGCTGGATaGAGCGGAAGAGCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMRGCAG*SGRAHN Trigger: ATTATGTGCTCTTCCGCTCCATCCAGCGCAGCCGCG...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR TCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCTTGTGCATCTGTCTCTaGACTGCAGGTGTACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGLCICL*TAGVLW Trigger: CCAGAGTACACCTGCAGTTCAGAGACAGATGCACAA...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATAGGTTATCACCAGGATaGCCAAGAGCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDRLSPG*PRAPGP Trigger: TGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCT...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATGCTTCCAGGACACAATaGCAACCAACCCGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDASRTQ*QPTRRT Trigger: CGTTCTCCGGGTTGGTTGGCATTGTGTCCTGGAAGC...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCAGGGGCAAGCTGCATATaGACCAGATCCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPEVMQLEVAKLKSHLDSGASCI*TRSREK Trigger: CTTCTCCCTGGATCTGGTGCATATGCAGCTTGCCCC...TGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCGTTCAGGGGCAAGCTaGATATGCACCAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCRSGAS*ICTRSR Trigger: CCTGGATCTGGTGCATATGCAGCTTGCCCCTGAACG...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 |
||
| CDS-3UTR GCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCCATCTGTCTCTGAACTaGAGGTGTACTCTGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGHLSLN*RCTLEG Trigger: ACCCTCCAGAGTACACCTGCAGTTCAGAGACAGATG...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCEPSPR*AGPLDA Trigger: AGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTC...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKAEKPPRFMSLFACPTEPSPR*AGPLDA Trigger: AGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTC...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCCCTCCAAGTCCAGCATaGTGTGTAGGAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVMQLEVAKLKSHLDSCLPPSPA*CVGEEL Trigger: CAGCTCCTCTCCTACACACCATGCTGGACTTGGAGG...GAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGGGTCGCTGTGAGACCTaGGCAGCAGCAGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLGRCET*AAAVVE Trigger: CTCCACCACTGCTGCTGCCCAGGTCTCACAGCGACC...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCGAACCTTCTGGAAGGTaGGCACTGGGCGGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFAEPSGR*ALGGVS Trigger: AGAAACGCCGCCCAGTGCCCACCTTCCAGAAGGTTC...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTGGGCCAGCCCCAACGTaGGCAGGGCCTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVGPAPT*AGPGAR Trigger: CCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCC...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAAAGAGATCACTAGAGTaGATGGCCGCTTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQQEPSKAGRKGTPWESIKRSLE*MAASRT Trigger: TGTCCTGGAAGCGGCCATTCACTCTAGTGATCTCTT...TATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCAGTGCATCACAGGTGGAGTTaGGGGCAACTTTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPNQLMLMGSSIALICSVHHRWS*GQLSAP Trigger: AGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATG...CACTGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCATTGCTCTGATCTGTTCACATCACAGGTGGAGTTaGGGGCAACTTTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPNQLMLMGSSIALICSHHRWS*GQLSAP Trigger: AGGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATG...TGAACAGATCAGAGCAATGCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTGGGGTGAGGGAACCTaGGCTATCACTGAAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VMQLEVAKLKSHLDSCLFWGEGT*AITEAS Trigger: CGACGCTTCAGTGATAGCTCAGGTTCCCTCACCCCA...AAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGTGGTATAAAGGTCCCTaGAGTCAGCGATGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMWYKGP*SQRCRW Trigger: CCAGCGACATCGCTGACTTCAGGGACCTTTATACCA...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTCATTGGTATAAAGGTCCCTaGAGTCAGCGATGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGFCPHTVPWNIRKRHSHWYKGP*SQRCRW Trigger: CCAGCGACATCGCTGACTTCAGGGACCTTTATACCA...ATGAGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCGCTTCCAGGACACAATaGCAACCAACCCGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFAASRTQ*QPTRRT Trigger: CGTTCTCCGGGTTGGTTGGCATTGTGTCCTGGAAGC...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCCGTTCAGGGGCAAGCTaGATATGCACCAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFARSGAS*ICTRSR Trigger: CCTGGATCTGGTGCATATGCAGCTTGCCCCTGAACG...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTCATCTGTCTCTGAACTaGAGGTGTACTCTGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKAGRKGTPWESIERISHLSLN*RCTLEG Trigger: ACCCTCCAGAGTACACCTGCAGTTCAGAGACAGATG...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTTCAAATCACCACAGCTaGGAAGGTGGAGGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PEVMQLEVAKLKSHLDSCSNHHS*EGGGSL Trigger: GAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGA...ACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGTCAAATCACCACAGCTaGGAAGGTGGAGGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMSNHHS*EGGGSL Trigger: GAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGA...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGTCAGGGGCAAGCATATaGACCAGATCCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMSGASI*TRSREK Trigger: CTTCTCCCTGGATCTGGTGCATATGCTTGCCCCTGA...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCGAGGGTCAAACAGAGTaGCCTGGCTGTCTCTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGGKAEKPPRFMSLFACEGQTE*PGCLFA Trigger: TGCGAAGAGACAGCCAGGCCACTCTGTTTGACCCTC...GCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTGAACCTTCTGGAAGGTaGGCACTGGGCGGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFEPSGR*ALGGVS Trigger: AGAAACGCCGCCCAGTGCCCACCTTCCAGAAGGTTC...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | AACACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTAGTTCCTGTAGGGTCTaGAGACCTCCTAGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTQAFAPIQCPGISERGTSSCRV*RPPRQL Trigger: CAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACT...AGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGAGTTCCTGTAGGGTCTaGAGACCTCCTAGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMSSCRV*RPPRQL Trigger: CAGCTGTCTAGGAGGTCTCCAGACCCTACAGGAACT...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| 3UTR CAA 72 bp | ACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTaGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGALKGRQERNT*GEYRADFFLSQ Trigger: CTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTAGGAGGCCACCATGCTaGAGGTTATCACCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFRRPPC*RLSPGC Trigger: GCATCCTGGTGATAACCTTCAGCATGGTGGCCTCCT...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCAAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAKLKSHLDSCLFLPALPKSRAS*AFLQER Trigger: TCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTT...TGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTTGTGCATCTGTCTCTaGACTGCAGGTGTACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDLCICL*TAGVLW Trigger: CCAGAGTACACCTGCAGTTCAGAGACAGATGCACAA...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTGCTGAAGGCTGGAGCCATTATACGTaGTGCTTTGTGCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRADFFLSQPVVHRAAEGWSHYT*CFVHLS Trigger: AGACAGATGCACAAAGCATCACGTATAATGGCTCCA...GCCTTCAGCAGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR GCA 90 bp | AACACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCATCTGTCTCTGAACTaGAGGTGTACTCTGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTQAFAPIQCPGISERGTHLSLN*RCTLEG Trigger: ACCCTCCAGAGTACACCTGCAGTTCAGAGACAGATG...AGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTCAAATCACCACAGCTaGGAAGGTGGAGGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFASNHHS*EGGGSL Trigger: GAGAGAGCCTCCACCTTCGCAGCTGTGGTGATTTGA...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCGACCTCCTAGACAGCTaGAGGAAACGAGTGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AARGGKAEKPPRFMSLFADLLDS*RKRVTR Trigger: CCTAGTCACTCGTTTCCTCCAGCTGTCTAGGAGGTC...GGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTACTTGCTTATATCCATaGGCTCCAGTTCCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSTCLYP*APVPVG Trigger: CCCTACAGGAACTGGAGCCCATGGATATAAGCAAGT...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| 3UTR CAA 72 bp | GCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTaGCCTGCCCTACCACCGCTTGGCAAGGCACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: AKLKSHLDSCLF*PALPPLGKAQI Trigger: GATTTGTGCCTTGCCAAGCGGTGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGAGGAGGCCACCATGCTaGAGGTTATCACCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLRRPPC*RLSPGC Trigger: GCATCCTGGTGATAACCTTCAGCATGGTGGCCTCCT...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCAAAGAGATCACTAGAGTaGATGGCCGCTTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VAKLKSHLDSCLFLPALPKRSLE*MAASRT Trigger: TGTCCTGGAAGCGGCCATTCACTCTAGTGATCTCTT...TGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTTGGAGCCATTATACGTaGTGCTTTGTGCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEYRADFFLSQPVVHRAWSHYT*CFVHLS Trigger: AGACAGATGCACAAAGCATCACGTATAATGGCTCCA...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR GCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGAGGTTATCACCAGGATaGCCAAGAGCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLRLSPG*PRAPGP Trigger: TGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCT...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCAAGGATACAAGGGCACTaGGCTATCCATGGAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VAKLKSHLDSCLFLPALPRIQGH*AIHGAI Trigger: AATGGCTCCATGGATAGCCCAGTGCCCTTGTATCCT...TGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCACTTGCTTATATCCATaGGCTCCAGTTCCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGKAEKPPRFMSLFACPTTCLYP*APVPVG Trigger: CCCTACAGGAACTGGAGCCCATGGATATAAGCAAGT...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTAAGAGATCACTAGAGTaGATGGCCGCTTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFKRSLE*MAASRT Trigger: TGTCCTGGAAGCGGCCATTCACTCTAGTGATCTCTT...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR TCA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTGGAGCCATTATACGTaGTGCTTTGTGCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDWSHYT*CFVHLS Trigger: AGACAGATGCACAAAGCATCACGTATAATGGCTCCA...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGTGGTATAAAGGTCCCTaGAGTCAGCGATGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLWYKGP*SQRCRW Trigger: CCAGCGACATCGCTGACTTCAGGGACCTTTATACCA...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTAGGATACAAGGGCACTaGGCTATCCATGGAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFRIQGH*AIHGAI Trigger: AATGGCTCCATGGATAGCCCAGTGCCCTTGTATCCT...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGGACCTCCTAGACAGCTaGAGGAAACGAGTGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQLEVAKLKSHLDSCLFLDLLDS*RKRVTR Trigger: CCTAGTCACTCGTTTCCTCCAGCTGTCTAGGAGGTC...CAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTTGCTCTCGGTGGTGGTaGCAGAGGAGGCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVCSRWW*QRRPPC Trigger: GCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCA...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCGAGGGTACAGATTATTaGAGCACAAATGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARGGKAEKPPRFMSLFACEGTDY*STNGKA Trigger: GGCCTTACCATTTGTGCTGCAATAATCTGTACCCTC...GCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTTTTGAGGGTACAGATTATTaGAGCACAAATGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRKGTPWESIERISFEGTDY*STNGKA Trigger: GGCCTTACCATTTGTGCTGCAATAATCTGTACCCTC...AAAAGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000147696.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVEPSPR*AGPLDA Trigger: AGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTC...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| 3UTR CAA 72 bp | AATGTTTTACAGGTCAGGCAATTAAGGTTAAATAACTaGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NVLQVRQLRLNN*PEVMQLEVAKL Trigger: CAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTTATTTAACCTTAATTGCCTGACCTGTAAAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS CCA 90 bp | ACCTGGGCCAGCCCCAACGTGAGCAGGGCCTGGAGCCAGGGTCGGTaGAGGCGGAGGTGGGTAAGGCCCCGGGTACTGGGCCGGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: TWASPNVSRAWSQGR*RRRWVRPRVLGRLV Trigger: GACCAGCCGGCCCAGTACCCGGGGCCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCCAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS CCA 90 bp | AGGATGCCCAAGAGCACCTGGGCCAGCCCCAACGTGAGCAGGGCCTaGAGCCAGGGTCGGTGGAGGCGGAGGTGGGTAAGGCCCCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: RMPKSTWASPNVSRA*SQGRWRRRWVRPRV Trigger: TACCCGGGGCCTTACCCACCTCCGCCTCCACCGACCCTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCATCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGCGTCGAGCTGGTGCTCGGGCAGGAGGGGGTGCAGCTGAGCGGCTGTCATCACAGGTGGAGTaGAGGGCAACTTTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLKRRAGARAGGGAAERLSSQVE*RATFSS Trigger: GGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGA...CAGCCGCTCAGCTGCACCCCCTCCTGCCCGAGCACCAGCTCGACGCTTCAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | CCGGGTGGGGTGAGGGAACCTGAGCTATCACTGAAGCGTCGAGCTGGTGCTCGGCTGAAGAGCAGGTTCTaGAGGGCCCCTCTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PGGVREPELSLKRRAGARLKSRF*RAPLAS Trigger: TGAAGCCAGAGGGGCCCTCAAGAACCTGCTCTTCAG...CCGAGCACCAGCTCGACGCTTCAGTGATAGCTCAGGTTCCCTCACCCCACCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCCCACACCCATGCAGCACAGGACAGAAGCTCTGCCCTTCAGAGAGGCAGTCCCGGCTGCCTCCATaGAGGCTGAGGCTGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FLPHPCSTGQKLCPSERQSRLPP*RLRLCG Trigger: CCCACACAGCCTCAGCCTCAATGGAGGCAGCCGGGA...CTGCCTCTCTGAAGGGCAGAGCTTCTGTCCTGTGCTGCATGGGTGTGGGAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGCTGCTGAAGGCTGCTGGTCCTAACCAGCTAATGCTTATGGGCTCCAGCCGAGCACGTAGCAACTaGGGGGAAGGGCAGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGLLKAAGPNQLMLMGSSRARSN*GEGQRA Trigger: AGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCG...GCTGGAGCCCATAAGCATTAGCTGGTTAGGACCAGCAGCCTTCAGCAGCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CAA 90 bp | CCTTCAGAGAGGCAGAGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PSERQRQATGALKGRQERDGQDL*MLSVVV Trigger: CACCACCACCGAGAGCATCAAGAGGTCCTGCCCATC...CCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCTCTGCCTCTCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RQATGALKGRQERNTLGEDGQDL*MLSVVV Trigger: CACCACCACCGAGAGCATCAAGAGGTCCTGCCCATC...CTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGTCGCCTTAGGGAGGAGCCAGAGCTCAAATCACCACAGCTGCGAAGGTGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TRVALGRSQSSNHHSCEGDGQDL*MLSVVV Trigger: CACCACCACCGAGAGCATCAAGAGGTCCTGCCCATC...ACCTTCGCAGCTGTGGTGATTTGAGCTCTGGCTCCTCCCTAAGGCGACTCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | TTGGGAGAGTATAGAGCGGATTTCTTTTTGAGCCAGCCAGTGGTGCACAGGGCTCGAGCACGTAGCAACTaGGGGGAAGGGCAGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGEYRADFFLSQPVVHRARARSN*GEGQRA Trigger: AGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCG...AGCCCTGTGCACCACTGGCTGGCTCAAAAAGAAATCCGCTCTATACTCTCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCCGAGCACGTAGCAACTaGGGGGAAGGGCAGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGKAEKPPRFMSLFACPTRARSN*GEGQRA Trigger: AGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCTCG...GGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CAA 90 bp | CTAATTTTCCTCTGTCAATGCTGTAAGCAGGGGGCATTTCCTCCCACACCCATGTCCCGGCTGCCTCCATaGAGGCTGAGGCTGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LIFLCQCCKQGAFPPTPMSRLPP*RLRLCG Trigger: CCCACACAGCCTCAGCCTCAATGGAGGCAGCCGGGA...CATGGGTGTGGGAGGAAATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS TCA 90 bp | CAGACCTTCCCTTCCATGGAGCACTCTCGGAAGTCCCGAGCCAGCTaGGCATTCTTACAGGAGAGAACAGAGCCAGCCATGCTAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: QTFPSMEHSRKSRAS*AFLQERTEPAMLSM Trigger: CATGCTTAGCATGGCTGGCTCTGTTCTCTCCTGTAAGAATGCTCAGCTGGCTCGGGACTTCCGAGAGTGCTCCATGGAAGGGAAGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | AACTTGCCTGAGGTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: NLPEVMQLEVAKLKSHLDDGQDL*MLSVVV Trigger: CACCACCACCGAGAGCATCAAGAGGTCCTGCCCATC...ATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGACCTCAGGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | CCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATAGAGCGGATTTCTCTGAAGAGCAGGTTCTaGAGGGCCCCTCTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PSKAGRKGTPWESIERISLKSRF*RAPLAS Trigger: TGAAGCCAGAGGGGCCCTCAAGAACCTGCTCTTCAG...AGAAATCCGCTCTATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | AAGCAACAGGAGCCCTCAAAGGCAGGCAGGAAAGGAACACCTTGGGAGAGTATACTGAAGAGCAGGTTCTaGAGGGCCCCTCTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KQQEPSKAGRKGTPWESILKSRF*RAPLAS Trigger: TGAAGCCAGAGGGGCCCTCAAGAACCTGCTCTTCAG...TATACTCTCCCAAGGTGTTCCTTTCCTGCCTGCCTTTGAGGGCTCCTGTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | GTCATGCAGCTAGAGGTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTCCCGGCTGCCTCCATaGAGGCTGAGGCTGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: VMQLEVAKLKSHLDSCLFSRLPP*RLRLCG Trigger: CCCACACAGCCTCAGCCTCAATGGAGGCAGCCGGGA...AAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCACCTCTAGCTGCATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 |
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| CDS-3UTR CAA 90 bp | CACTCAGGCTTTTGCCCCCATACAGTGCCCTGGAATATCAGAAAGAGGCACTCTTCATCACAGGTGGAGTaGAGGGCAACTTTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HSGFCPHTVPWNIRKRHSSSQVE*RATFSS Trigger: GGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGA...AGAGTGCCTCTTTCTGATATTCCAGGGCACTGTATGGGGGCAAAAGCCTGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | GTGGCAAAGCTGAAAAGCCACCTAGATTCATGTCTCTTTTTGCCTGCCCTACCATCATCACAGGTGGAGTaGAGGGCAACTTTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VAKLKSHLDSCLFLPALPSSQVE*RATFSS Trigger: GGAGCTGAAAGTTGCCCTCAACTCCACCTGTGATGA...TGGTAGGGCAGGCAAAAAGAGACATGAATCTAGGTGGCTTTTCAGCTTTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000147696.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTTACAAACATTCATGTTCACAATGTTTTACAGGTCAGGCAATTAAGGTTGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: QCYKHSCSQCFTGQAIKVDGQDL*MLSVVV Trigger: CACCACCACCGAGAGCATCAAGAGGTCCTGCCCATC...AACCTTAATTGCCTGACCTGTAAAACATTGTGAACATGAATGTTTGTAACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS CAA 90 bp | CCGGAGAACGCCAGCGAGAACCCAGCCCAAGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTGACAGAGGAGGCCACCATGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PENASENPAQDGQDL*MLSVVVTEEATMLK Trigger: CTTCAGCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTCTCGCTGGCGTTCTCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS CCA 72 bp | ATGCTGAAGGTTATCACCAGGATGCCCAAGAGCACCTaGGCCAGCCCCAACGTGAGCAGGGCCTGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MLKVITRMPKST*ASPNVSRAWSQ Trigger: CTGGCTCCAGGCCCTGCTCACGTTGGGGCTGGCCCAGGTGCTCTTGGGCATCCTGGTGATAACCTTCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041913.13 ENSMUST00000117278.8 ENSMUST00000119707.2 ENSMUST00000127982.8 ENSMUST00000147696.8 |
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| CDS CCA 72 bp | CAACCCGGAGAACGCCAGCGAGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCTCTCGGTGGTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: QPGERQREPSPR*AGPLDALGGGD Trigger: GTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTCTCGCTGGCGTTCTCCGGGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041913.13 ENSMUST00000119707.2 ENSMUST00000147696.8 |
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| CDS CAA 90 bp | AAGGAGGGAGAGGACGAGAACCCAGCCCAAGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTGACAGAGGAGGCCACCATGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KEGEDENPAQDGQDL*MLSVVVTEEATMLK Trigger: CTTCAGCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTCTCGTCCTCTCCCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127982.8 |
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| CDS CAA 90 bp | GAGAAGAAAGAGATCGAGAACCCAGCCCAAGATGGGCAGGACCTCTaGATGCTCTCGGTGGTGGTGACAGAGGAGGCCACCATGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: EKKEIENPAQDGQDL*MLSVVVTEEATMLK Trigger: CTTCAGCATGGTGGCCTCCTCTGTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTCTCGATCTCTTTCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117278.8 |
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| CDS CCA 72 bp | CAAGGAGAAGAAAGAGATCGAGAACCCAGCCCAAGATaGGCAGGACCTCTTGATGCTCTCGGTGGTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: QGEERDREPSPR*AGPLDALGGGD Trigger: GTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCATCTTGGGCTGGGTTCTCGATCTCTTTCTTCTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117278.8 |
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