RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM186A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045350

Ensembl transcript IDs: ENSMUST00000062631.15, ENSMUST00000100209.6

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGTGGGGTCGGAGTaGTGCCCAGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAVGSE*CPGPGP
Trigger: AGGCCCAGGCCCTGGGCATCACTCCGACCCCACAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGAGGGGTCGGGGTaGTACCCAGGGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAEGSG*YPGPGS
Trigger: AGACCCAGGCCCTGGGTATCACCCCGACCCCTCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGAGGGGTCGGAGTaGTGCCCAGGGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAEGSE*CPGPGP
Trigger: AGGTCCAGGCCCTGGGCATCACTCCGACCCCTCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGAGGGGTCGGAGTaGTGCCCAGGGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAEGSE*CPGPGP
Trigger: TGGTCCAGGCCCTGGGCATCACTCCGACCCCTCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCCTGACTGGGTGTaGGGGGTGGCAGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPDWV*GVAALP
Trigger: AGGCAAAGCTGCCACCCCTCACACCCAGTCAGGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGAGCCTGGGCCTaGTCAGGGGTCAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRAWA*SGVRLV
Trigger: GACCAGTCTGACCCCTGAGCAGGCCCAGGCTCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGTACCCACCCAGCTaGGCCCAGAGCGCACTCATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGYPPS*AQSALI
Trigger: GATGAGTGCGCTCTGGGCCCAGCTGGGTGGGTACCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATGCCCAGGGCCTaGGCCTGCTCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVMPRA*ACSGLR
Trigger: TCTCAGCCCTGAGCAGGCCCAGGCCCTGGGCATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTAGGACCAAGGGGTaGCCCTGGAGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRTKG*PWSGRS
Trigger: GCTCCTCCCACTCCAGGGCCACCCCTTGGTCCTAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGAGGGGTTGGGGTaGTACCCAGAGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAEGLG*YPEPGS
Trigger: AGACCCAGGCTCTGGGTATCACCCCAACCCCTCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGGGCCTCAGCCTGTTaGGGGCTCAGACTGACCTGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRASAC*GLRLTC
Trigger: GCAGGTCAGTCTGAGCCCTCAACAGGCTGAGGCCCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGAGAGTGGTCGGCTaGGGGGTCGGAGTGATACCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVRVVG*GVGVIP
Trigger: GGGTATCACTCCGACCCCTCAGCCGACCACTCTCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACTCACGGTTCGGAGTaGTGCCCAGGGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTHGSE*CPGPGP
Trigger: AGGTCCAGGCCCTGGGCATCACTCCGAACCGTGAGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTCAGGGGTCAGACTaGTCCCCTTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPQGSD*SPWPWP
Trigger: AGGCCAAGGCCAAGGGGATCAGTCTGACCCCTGAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCCTGCTCAGGTGTaGGAGCAATCCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPAQV*EQSPEP
Trigger: AGGCTCTGGGGATTGCTCTCACACCTGAGCAGGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCCTGCTCAGGTGTaGGAGCAATCCCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPAQV*EQSPGH
Trigger: ATGCCCTGGGGATTGCTCTCACACCTGAGCAGGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCTGGGAAATGCCTaGGCTGGCTGGCGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGLGNA*AGWRAV
Trigger: TACTGCTCGCCAGCCAGCTCAGGCATTTCCCAGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATGAGTGCCAGGGCCTaGGCCTGCTCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGMSARA*ACSGVR
Trigger: TCTCACCCCTGAGCAGGCCCAGGCCCTGGCACTCAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGGGCCTaGGCCTGCTCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*ACSGVR
Trigger: TCTCACCCCTGAGCAGGCCCAGGCCCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTCAGGGGTTAGTGTaGTCGGCTGTGGGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAQGLV*SAVGSE
Trigger: CTCCGACCCCACAGCCGACCACACTAACCCCTGAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATGCCCAGGGCCTaGGCCTGCTCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVMPRA*ACSGVS
Trigger: ACTAACCCCTGAGCAGGCCCAGGCCCTGGGCATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCGATTCCCAGGGAGTaGGCCTCCTCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAIPRE*ASSGVR
Trigger: TCTGACCCCTGAGGAGGCCCACTCCCTGGGAATCGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTCAGGGGTCAGACTaGTCCTCCGTGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAQGSD*SSVPWP
Trigger: AGGCCAAGGCACGGAGGACCAGTCTGACCCCTGAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCAGGCTCAACTGCCTaGGGCTGCTTGGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAGSTA*GCLGVR
Trigger: CCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGCCTGCTGAGTGGTaGGAGTGGTTCCGTGGACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQPAEW*EWFRGP
Trigger: AGGTCCACGGAACCACTCTCACCACTCAGCAGGCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGATGGGTTGGAGTaGTACCCAGGGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGADGLE*YPGPGS
Trigger: AGACCCAGGCCCTGGGTATCACTCCAACCCATCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGATGGGTTGGAGTaGTACCCAGGGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGADGLE*YPGPGP
Trigger: AGGTCCAGGCCCTGGGTATCACTCCAACCCATCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTCAGGGGTCAGACTaGTCCCCTTTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPQGSD*SPLPAQ
Trigger: CTGAGCAGGCAAAGGGGATCAGTCTGACCCCTGAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGAGTGAGTTTGGGCTaGTGTTCCTCCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRVSLG*CSSVAP
Trigger: GGGGGCCACGGAGGAACAGCAGCCCAAACTCACTCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGTGGTGAGAATGAGTaGCAGGGCCTGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSGENE*QGLGLL
Trigger: GAGCAGGCCCAGGCCCTGGCACTCATTCTCACCACT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGGGCCTGGGTCTaGTCAGGGGTTAGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRAWV*SGVSVI
Trigger: GATCACACTAACCCCTGAGCAGACCCAGGCCCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAGAGTGAGCCCCATTaGTTGGGCCTGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGESEPH*LGLQGT
Trigger: AGTCCCCTGCAGGCCCAAGCAATGGGGCTCACTCTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGCTGTTCCTCCGTaGCCCCCATTACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAAVPP*PPLHQA
Trigger: AGCCTGGTGTAATGGGGGCCACGGAGGAACAGCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATGCCCAGGGCCTaGACCTGCTCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVMPRA*TCSGVS
Trigger: ACTAACCCCTGAGCAGGTCCAGGCCCTGGGCATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATGCCCAGGGCCTaGGTCTGCTCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVMPRA*VCSGVS
Trigger: ACTAACCCCTGAGCAGACCCAGGCCCTGGGCATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGGGCCTaGGCCTGCTCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*ACSGVS
Trigger: ACTAACCCCTGAGCAGGCCCAGGCCCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATGACTCCCAGAGCCTaGGCCTGCTCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGMTPRA*ACSGVR
Trigger: TCTGACCCCTGAGCAGGCCCAGGCTCTGGGAGTCAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGGCAGCTTTGCCTTaGCAGGCTCAACTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVAALP*QAQLPG
Trigger: CCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACTGGGTGTGAGGGGTaGCAGCTTTGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTGCEG*QLCLGR
Trigger: CCTGCCAAGGCAAAGCTGCCACCCCTCACACCCAGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCTGGACTCCCTGCTaGAAAACGGCCCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPWTPC*KTAPVK
Trigger: CTTTACAGGGGCCGTTTTTCAGCAGGGAGTCCAGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTGCTTCAGCCTGCTaGGTGGTGAGAGTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCASAC*VVRVVP
Trigger: CGGAACCACTCTCACCACTCAGCAGGCTGAAGCACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGGGCCTGGGTCTaGTCAGGGCTCAGATTGATT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRAWV*SGLRLI
Trigger: AATCAATCTGAGCCCTGATCAGACCCAGGCCCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGGTCCTCAAGGCCTaGACCTGCTCAGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLVLKA*TCSEVR
Trigger: TCTGACCTCTGAGCAGGTTCAGGCCTTGAGGACCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGCTAGGAGCTGTCTaGGGGAAGGAGGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVLGAV*GKEGFL
Trigger: CAGAAACCCCTCCTTCCCTCAGACAGCTCCTAGCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCGGGAATGAGCCTTaGTGGGCCTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLGNEP*WALPFR
Trigger: CCTGAATGGCAAGGCCCATCAAGGCTCATTCCCGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTAGGGCCTCTGCTGTaGAAGGATGCAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVGPLL*KDAVGW
Trigger: CCATCCCACTGCATCCTTTCACAGCAGAGGCCCTAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCGTCTTCAGGGTGCTaGTCAGTGGGGGACACTATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPSSGC*SVGDTI
Trigger: GATAGTGTCCCCCACTGATCAGCACCCTGAAGACGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGGTGAGCCTGTGCTaGCTGGAATCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLVSLC*LESAAQ
Trigger: CTGAGCAGCTGATTCCAGGCAGCACAGGCTCACCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCCTGCTCAGGGACATaGACTTGGTGGGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGACSGT*TWWGFG
Trigger: TCCAAAGCCCCACCAAGTGCATGTCCCTGAGCAGGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGAGCCTGGGTCTaGTCAGGGGTGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRAWV*SGVKVI
Trigger: GATCACTTTCACCCCTGAGCAGACCCAGGCTCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCCAAGGCCTTGGCCTaGTCAGGGGTTAGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAKALA*SGVSVI
Trigger: GATCACACTAACCCCTGAGCAGGCCAAGGCCTTGGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCCGTGCCTTGGCCTaGTTAGGGGTGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLRALA*LGVTVI
Trigger: GATCACTGTCACCCCTAAGCAGGCCAAGGCACGGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTTGTGCCTGGGCCTaGTCAGGTGTGAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPCAWA*SGVRAI
Trigger: GATTGCTCTCACACCTGAGCAGGCCCAGGCACAAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACAATTGCCTGGGGCTaGTTGGGAGTGAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTIAWG*LGVRGE
Trigger: CTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCTCTGGAGCAAGCTaGTTCTGCAAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSSGAS*FCKGWA
Trigger: GGCCCAGCCTTTGCAGAAGCAGCTTGCTCCAGAGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCCTTGATGGGCCTTaGCATTCAGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLDGP*HSGGWR
Trigger: CCTCCAGCCTCCTGAATGGCAAGGCCCATCAAGGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTGGCTTTCTGAGCTaGAACCCTTCCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSGFLS*NPSSQG
Trigger: CCCCTGGGAGGAAGGGTTCCAGCTCAGAAAGCCAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTCCCACATGGGACTTaGTCCCCCTCTGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFPHGT*SPSALL
Trigger: GAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATTCCCAGGACCTaGGCCTGTAGGGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRT*ACRGVR
Trigger: TCTGACTCCCCTACAGGCCCAGGTCCTGGGAATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGGGCCTaGGTCTGCTCACGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*VCSRVK
Trigger: TTTCACCCGTGAGCAGACCCAGGCCCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGGGCCTaGACCTGCTCAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*TCSEVR
Trigger: TCTCACCTCTGAGCAGGTCCAGGCCCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGATCAGCTGAGGGGTTaGGGTGATACCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGDQLRG*GDTQSL
Trigger: CAGGCTCTGGGTATCACCCCAACCCCTCAGCTGATC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTTCGCCAAGGCCTTaGCCTGCTCAGGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCSPRP*PAQGLV
Trigger: CACTAACCCCTGAGCAGGCCAAGGCCTTGGCGAACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGGGCCTaGGTCTGCTCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*VCSGVS
Trigger: ACTAACCCCTGAGCAGACCCAGGCCCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGAGCCCCAGAGCTTaGGCCTGCTCTGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVSPRA*ACSGLR
Trigger: TCTTAGTCCAGAGCAGGCCCAAGCTCTGGGGCTCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAAATCCCCAGATCCTaGGCCTGCTCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEIPRS*ACSGVR
Trigger: TCTCACCCCTGAGCAGGCCCAGGATCTGGGGATTTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTATTCCCAGATCCTaGGCCTGCTCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAIPRS*ACSGVR
Trigger: TCTCACCCCTGAGCAGGCCCAGGATCTGGGAATAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGGTTCTGGACATTaGGAGCTCCTCATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGGSGH*ELLMGS
Trigger: GCTGCCCATGAGGAGCTCCCAATGTCCAGAACCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCTCTACTCTCTGGTaGGCCTGTGCTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSTLW*ACAAWN
Trigger: ATTCCAGGCAGCACAGGCTCACCAGAGAGTAGAGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGGGCCTTAGCCTGCTaGAGGTTGAGAGTGATTCCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRALAC*RLRVIP
Trigger: GGGAATCACTCTCAACCTTCAGCAGGCTAAGGCCCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCCTGCTCAGGGGTaGGGCAAATCTTCATTACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPAQG*GKSSLP
Trigger: AGGTAATGAAGATTTGCCTCACCCCTGAGCAGGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCTTTCTCATCAATaGGAGGGGACTGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGLSHQ*EGTVTE
Trigger: CTCGGTCACAGTCCCCTCTCATTGATGAGAAAGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACCAGGTTCTTCCTCTaGGCCTCCACATCGACGACA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTRFFL*ASTSTT
Trigger: TGTCGTCGATGTGGAGGCTCAGAGGAAGAACCTGGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTCTGGTGAGCCTGTaGTGCCTGGAATCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLVSL*CLESAA
Trigger: AGCAGCTGATTCCAGGCAGCACAGGCTCACCAGAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCAAGCTCTTGCTCCTaGCCTGCTGTGAAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPSSCS*PAVKAV
Trigger: GACTGCTTTCACAGCAGGGCAGGAGCAAGAGCTTGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGAGCTTGGGCCTaGTCTGGACTAAGACTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRAWA*SGLRLI
Trigger: GATCAGTCTTAGTCCAGAGCAGGCCCAAGCTCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGACTGATCCCCTTTaGCTGCTCAGGGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQTDPL*LLRADS
Trigger: ACTGTCAGCCCTGAGCAGGCAAAGGGGATCAGTCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTTCCAGCTGCTTCTaGTTGTCCGTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCSSCF*LSVQLC
Trigger: GCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCGTCTCTGTTCCAGCTaGTTCTGCTTGTCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRLCSS*FCLSVQ
Trigger: CTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCCTCGCTGAGTTCTTaGATGACCTGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSSLSS*MTCLER
Trigger: CCGCTCCAAGCAGGTCATCCAAGAACTCAGCGAGGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTCGTCCTCAGTCCTaGCTCTTCCTTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLRPQS*LFLLHS
Trigger: GCTGTGCAGAAGGAAGAGCCAGGACTGAGGACGAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCCCGAGCCTGCTCATaGGTTAGACTAATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGARACS*VRLILW
Trigger: CCAGAGGATTAGTCTAACCCATGAGCAGGCTCGGGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGATACCCAGAGCCTaGGTCTGCTCAGGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVIPRA*VCSGVK
Trigger: TTTCACCCCTGAGCAGACCCAGGCTCTGGGTATCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGACTGTGATTCTGTaGGCCTGGGCCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVTVIL*AWACSG
Trigger: TCCTGAACAGGCCCAGGCCCACAGAATCACAGTCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATTGGGAGCTCCTCATaGGCAGCAGAGCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGIGSSS*AAEPPE
Trigger: TTCTGGAGGCTCTGCTGCCCATGAGGAGCTCCCAAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTTTTCTGGCTTTCTaGGCTGGAACCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLFLAF*AGTLPP
Trigger: GGGAGGAAGGGTTCCAGCTCAGAAAGCCAGAAAAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCCTGCAGCATGCCCTaGATCTCTGAAACCTTAGCG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSCSMP*ISETLA
Trigger: CGCTAAGGTTTCAGAGATTCAGGGCATGCTGCAGGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTTTTAGTTCATCGCTaGCGGTGTTCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVLVHR*RCSGPW
Trigger: CCAAGGCCCTGAACACCGTCAGCGATGAACTAAAAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTTCAGAACAGACTTaGCCACTCGAGAGCTCACGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPSEQT*PLESSR
Trigger: TCGTGAGCTCTCGAGTGGTCAAGTCTGTTCTGAAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGATCTGCCCTTCTTaGGTTGTTCCCACATGGGAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQICPS*VVPTWD
Trigger: GTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGGAAGAGGAGAGAGTaGGTTTGGGCTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGWKRRE*VWAAVP
Trigger: AGGAACAGCAGCCCAAACTCACTCTCTCCTCTTCCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGAGAGATGCCATTaGAAGCTGAGGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGERCH*KLRGHL
Trigger: CAGATGTCCCCTCAGCTTTCAATGGCATCTCTCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGAGAGTGATTGGCTaGTGGGTTGGAGTGATACCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVRVIG*WVGVIP
Trigger: GGGTATCACTCCAACCCATCAGCCAATCACTCTCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAGCCATTCCTGGTGTaGCTGAAATCTCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEPFLV*LKSPIS
Trigger: GGAGATGGGAGATTTCAGTCACACCAGGAATGGCTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGGTAAATGGGGCTTaGGTAGGAGAAGGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGVNGA*VGEGLN
Trigger: ATTGAGGCCTTCTCCTACTCAAGCCCCATTTACCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGCCTGGAATCAGCTaGTCAGATCTGCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLPGIS*SDLPFL
Trigger: CAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCACTTCGGCTTTTCTaGATCCTCTGCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPLRLF*ILCISQ
Trigger: CTGGGAGATGCAGAGGATGCAGAAAAGCCGAAGTGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTAGCCCCAAGCTCTTaGTCCTGCCCTGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLAPSS*SCPAVK
Trigger: TTTCACAGCAGGGCAGGAGCAAGAGCTTGGGGCTAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGATCCCCTTTGCCTaGTCAGGGCTGACAGTGATT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLIPFA*SGLTVI
Trigger: AATCACTGTCAGCCCTGAGCAGGCAAAGGGGATCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGAGGGTGACAGCTaGTGCCTGAGTTTGTTCGTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGEGDS*CLSLFV
Trigger: TACGAACAAACTCAGGCAGCAGCTGTCACCCTCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAAGGCCTCAATGCCTaGAGTGGAATAGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEGLNA*SGIEAG
Trigger: CCCTGCTTCTATTCCACTGCAGGCATTGAGGCCTTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATACTGTGCAGGGAGTaGAGAAGTTTGTGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGILCRE*RSLCRL
Trigger: CAGGCGGCACAAACTTCTGCACTCCCTGCACAGTAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCTTCACTGGAAGATaGGTCCCATGTCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPFTGR*VPCHCG
Trigger: TCCACAGTGACATGGGACCCATCTTCCAGTGAAGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGACATGCACTTGGTaGGGCTTTGGAGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGTCTW*GFGETK
Trigger: CTTCGTTTCTCCAAAGCCCCACCAAGTGCATGTCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCTTGGGCCTGCTCTaGACTAAGACTGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLGLL*TKTDLL
Trigger: CAGGAGATCAGTCTTAGTCCAGAGCAGGCCCAAGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCAGTGGCAGGCCTTTaGGTTTTATCTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSVAGL*VLSGLG
Trigger: CCCAAGACCAGATAAAACTCAAAGGCCTGCCACTGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCCAGGATGGCTCTTTaGAATGATTCTAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGARMAL*NDSRLP
Trigger: GGGCAGTCTAGAATCATTTCAAAGAGCCATCCTGGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTCTGCTTTTCCCAGTaGCGACTCCTCCTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFCFSQ*RLLLPY
Trigger: ATACGGAAGGAGGAGTCGTCACTGGGAAAAGCAGAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGAGCCTGGGCCTGCTaGGGAGTGAGATATATCTTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRAWAC*GVRYIF
Trigger: AAAGATATATCTCACTCCTCAGCAGGCCCAGGCTCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCATTCCTGGTGTGACTaGAATCTCCCATCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGHSWCD*NLPSPS
Trigger: GCTTGGAGATGGGAGATTTCAGTCACACCAGGAATG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTTTTGAACTTCTCTaGGGTCTTCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAFELL*GLPGVG
Trigger: ACCAACCCCTGGAAGACCTCAGAGAAGTTCAAAAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGTTTGGGGGAGTTaGGTGGTAAGAGATGGTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGVWGS*VVRDGS
Trigger: ACTACCATCTCTTACCACTCAACTCCCCCAAACACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCGCCTGATTTAATGTaGCCAGGTTCTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPPDLM*PGSSSE
Trigger: CTCAGAGGAAGAACCTGGTCACATTAAATCAGGCGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCAAAGTTTGTGCCTaGTCAGAGGTGAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLKVCA*SEVRDA
Trigger: GGCATCTCTCACCTCTGAGCAGGCACAAACTTTGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTGGTTCCTTGTCTTaGTCAGGAGTGGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLGSLS*SGVGVV
Trigger: AACCACTCCCACTCCTGAGCAAGACAAGGAACCAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCTGTGCCTTGACTTaGTCAGGAGTGAGAGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLCALT*SGVRVI
Trigger: GATCACTCTCACTCCTGAGCAAGTCAAGGCACAGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGATTGACCCTCTGTaGCTTGACTTGCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQIDPL*LDLLRS
Trigger: ACTCCTGAGCAAGTCAAGGCACAGAGGGTCAATCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTAGTGATGTTTGGTaGCTCTTGAGCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGSDVW*LLSHSW
Trigger: CCAGGAATGGCTCAAGAGGCACCAAACATCACTACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGGAGAAGGCCTCAATaGCTGCAGTGGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRRRPQ*LQWNRS
Trigger: GCTTCTATTCCACTGCAGGCATTGAGGCCTTCTCCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTGTCCGTCCAGCTGTaGATCACCTTCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSVQL*ITFFWY
Trigger: GTACCAGAAGAAGGTGATGCACAGCTGGACGGACAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATAGACCGTAGGCACTaGTTTCGTCTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGIDRRH*FRLCSS
Trigger: GCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTAACTGCAGCAGCTTaGGAATATCTGGGTACCCAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLTAAA*EYLGTH
Trigger: GTGGGTACCCAGATATTCCCAAGCTGCTGCAGTTAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTGGTCCCTTCCTTCTaGGAGTCGTCTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLVPSF*ESSVFP
Trigger: AGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCACTGTGGAGCTTTTaGTCCCTTCCTTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLWSF*SLPSGS
Trigger: ACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGTTTTATCTGGTCTTaGGGGGCCTCAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSFIWS*GASALS
Trigger: GGACAAAGCTGAGGCCCCCCAAGACCAGATAAAACT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCACTTGGTGGGGCTTTaGAGAAACGAAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGHLVGL*RNEGDS
Trigger: AGAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGGGGTGAGAGTGATTaGCTGATGGGTTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRGESD*LMGWSD
Trigger: ATCACTCCAACCCATCAGCCAATCACTCTCACCCCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAAGTGCTGGGCTTTCTaGAGAGTGATGGTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGKCWAF*RVMVNS
Trigger: GCTGTTCACCATCACTCTCCAGAAAGCCCAGCACTT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTCGTAGGGGTAAATaGGGCTTGAGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCRRGK*GLSRRR
Trigger: CCTTCTCCTACTCAAGCCCCATTTACCCCTACGACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTAGGAGACATCCATaGCTTCTCAGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGRRHP*LLRVQK
Trigger: CTTCTGGACTCTGAGAAGCCATGGATGTCTCCTACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCTCCAGAGGTGGGTaGGACTCTAGGTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSRGG*DSRFEE
Trigger: TTCTTCAAACCTAGAGTCCCACCCACCTCTGGAGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGAGCCATGGTTTCTaGCCCTTTTCAGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGSHGF*PFSEVE
Trigger: CTCAACTTCTGAAAAGGGCCAGAAACCATGGCTCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTCCTGCCCTGCTGTaGAAGCAGTCTTTAATTCTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAPALL*KQSLIL
Trigger: TAGAATTAAAGACTGCTTTCACAGCAGGGCAGGAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTAGGGGAGTCAGACTaGTTCTGTCCTCTTTGTACT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVGESD*FCPLCT
Trigger: AGTACAAAGAGGACAGAATCAGTCTGACTCCCCTAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCAGATTGATTCTCTaGGTCTTGACCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLRLIL*VLTCSV
Trigger: CACTGAGCAGGTCAAGACTCAGAGAATCAATCTGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCCTGCTGAGGAGTaGGATATATCTTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPAEE*DISFVP
Trigger: AGGTACAAAAGATATATCTCACTCCTCAGCAGGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGATTCTTGGCAATTGTaGGATACTGTGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGDSWQL*DTVQGV
Trigger: CACTCCCTGCACAGTATCTCACAATTGCCAAGAATC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCAGGGCTTGCAGTTaGTTAGTGGTAGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPRACS*LVVVMF
Trigger: AAACATCACTACCACTAAGCAACTGCAAGCCCTGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTTCAGTAGTCACTTaGGAGATCTGCACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSSVVT*EICTAS
Trigger: TGAGGCAGTGCAGATCTCCCAAGTGACTACTGAAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGAGAGTAATCCTTaGTTCCTTGTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGESNP*FLVLLR
Trigger: CCTGAGCAAGACAAGGAACCAAGGATTACTCTCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTTTGTGTGAGCTCTaGAGCAAGCTGCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCLCEL*SKLLLQ
Trigger: TTGCAGAAGCAGCTTGCTCCAGAGCTCACACAAACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTCAATGCCTGCAGTaGAATAGAAGCAGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPQCLQ*NRSRVR
Trigger: TCTTACCCTGCTTCTATTCCACTGCAGGCATTGAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTGTCCGAGTGTTTTaGAGAGGTCAGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLVRVF*RGQIFC
Trigger: GCAAAAGATCTGACCTCTTCAAAACACTCGGACAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGCCTCAGGTTTTTCTaGTATGAGAGACTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCLRFF*YERLLW
Trigger: CCAAAGGAGTCTCTCATATCAGAAAAACCTGAGGCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTCTTGTTTGGGAATaGGAGAAATCCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLVWE*EKSPDP
Trigger: AGGATCTGGGGATTTCTCTCATTCCCAAACAAGAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTGTTGTTTGGGAATaGGAGAAATCCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLVVWE*EKSPDP
Trigger: AGGATCTGGGGATTTCTCTCATTCCCAAACAACAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAATCCTTCCATCTTTaGGATAGTCTGTCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGESFHL*DSLSVE
Trigger: TTCCACCGACAGACTATCTCAAAGATGGAAGGATTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGCTTGAGTTTGTTCTaGAGTGTCAGGAGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCLSLF*SVRSLR
Trigger: CCTAAGACTCCTGACACTTCAGAACAAACTCAAGCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGGATTATCACGGTTaGTTATGGGCTTTCTCAACG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVDYHG*LWAFST
Trigger: CGTTGAGAAAGCCCATAAGCAACCGTGATAATCCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTTGTTCCAGGATCTaGTGGAAGGGTGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSCSRI*WKGGIV
Trigger: AACAATTCCACCCTTCCAGCAGATCCTGGAACAAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAGATTAGTTCTTTGTaGTTCAGCCTGCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEISSL*FSLLSG
Trigger: ACCACTCAGCAGGCTGAAGCACAAAGAACTAATCTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAAATTAATCCTCTGTaGCTTGGCCTGCTCAACTGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQINPL*LGLLNC
Trigger: ACAGTTGAGCAGGCCAAGGCACAGAGGATTAATTTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCTGGGCTTCAAGTTaGTTCTTAGAAAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLWASS*FLERWL
Trigger: GAGCCATCTTTCTAAGAAGCAACTTGAAGCCCAGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTGCTGTGAAAGGATaGAGTGGGATGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSAVKG*SGMEEI
Trigger: AATCTCTTCCATCCCACTGCATCCTTTCACAGCAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGATCTGCTGGAAGGGTaGAATTGTTCTTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGDLLEG*NCSLGI
Trigger: GATACCCAAAGAACAATTCCACCCTTCCAGCAGATC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGTTCCAGGATCTGCTaGAAGGGTGGAATTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCSRIC*KGGIVL
Trigger: AAGAACAATTCCACCCTTCCAGCAGATCCTGGAACA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGGTTTGGGGATTTaGATAGACTCAGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAGLGI*IDSEIR
Trigger: CCTTATCTCTGAGTCTATCCAAATCCCCAAACCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGAGCTCCAAATGCCTaGAATGGTTGGGTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRAPNA*NGWVVS
Trigger: ACTAACTACCCAACCATTCCAGGCATTTGGAGCTCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTATCCCCTTTCAAGCTaGCTGAAGAACTGCGTCATA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGYPLSS*LKNCVI
Trigger: TATGACGCAGTTCTTCAGCCAGCTTGAAAGGGGATA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGCCCGAAAGATATGTaGTTCCTCAATCTTATGGAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGPKDM*FLNLMD
Trigger: ATCCATAAGATTGAGGAATCACATATCTTTCGGGCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTCATCAGGGGTTACTaGAGTCACCTTAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFIRGY*SHLRSL
Trigger: AAGACTTCTAAGGTGACTTCAGTAACCCCTGATGAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGCTTCTCTTTAGGTTaGACCTTTCTTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGFSLG*TFLSSL
Trigger: CAGAGATGAAAGAAAGGTTCAACCTAAAGAGAAGCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCAGAGATAAGGATTTaGCTTCTCTGGGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSEIRI*LLWASS
Trigger: ACTTGAAGCCCAGAGAAGTCAAATCCTTATCTCTGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCTGGGATCTCAAATTaGAAGCTCAGTGGATTATCA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGAGISN*KLSGLS
Trigger: TGATAATCCACTGAGCTTGCAATTTGAGATCCCAGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTATCAGCTCCACGTTaGTCATTATTTCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSAPR*SLFQSA
Trigger: GGCTGACTGAAATAATGAGCAACGTGGAGCTGATAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCCTTATCTTCCTCTTaGTCTTCCTTCAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLSSS*SSFRTD
Trigger: GTCTGTTCTGAAGGAAGAGCAAGAGGAAGATAAGGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAATATTCCAAATGGTTaGACACCCAAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGNIPNG*TPKASW
Trigger: CCAAGATGCCTTGGGTGTGCAACCATTTGGAATATT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAATTGTGAGATACTGTaGAGGGAGTGCAGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGNCEIL*RECRSL
Trigger: CAAACTTCTGCACTCCCTGCACAGTATCTCACAATT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTTCTCTTCTTTTTCTaGCTTTCTGAGCTGGAACCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFLFFF*LSELEP
Trigger: GGGTTCCAGCTCAGAAAGCCAGAAAAAGAAGAGAAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCAGGAAGGCCAGGATaGCTCTTTGAAATGATTCTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSGRPG*LFEMIL
Trigger: TAGAATCATTTCAAAGAGCCATCCTGGCCTTCCTGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGGAATTGTTCTTTaGGTATCTGTGACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGGIVL*VSVTPD
Trigger: ATCTGGAGTCACAGATACCCAAAGAACAATTCCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGAAATATTCCAAATaGTTGCACACCCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLKYSK*LHTQGI
Trigger: GATGCCTTGGGTGTGCAACCATTTGGAATATTTCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTTTCCCAGTGTTTTaGATGGTTTTCACTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPFPVF*MVFTRL
Trigger: CAAACGAGTGAAAACCATCCAAAACACTGGGAAAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAAGCAAGAGATTTTCTaGAGGTCGACTGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGKQEIF*RSTECL
Trigger: TAGACATTCAGTCGACCTTCAGAAAATCTCTTGCTT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAATATCCAGTTGAGTaGGTTTCTTTTCCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEYPVE*VSFPPF
Trigger: AAACGGAGGAAAAGAAACTCACTCAACTGGATATTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTATAGTGTGTTCATaGGTAAGAGGACCACTCAAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSIVCS*VRGPLK
Trigger: TTTGAGTGGTCCTCTTACTCATGAACACACTATAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTTCTCCTTTCTCTTTaGAGGTGGAGTTACAATTGC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFLLSL*RWSYNC
Trigger: GCAATTGTAACTCCACCTTCAAAGAGAAAGGAGAAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR GCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTACCAGTTTCTTAATTaGTGGGTCTGTGATCTCACT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGYQFLN*WVCDLT
Trigger: AGTGAGATCACAGACCCAGCAATTAAGAAACTGGTA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTCCGTATACTCTTTaGATCAAAAGCCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLPYTL*IKSLSY
Trigger: GTAGGAAAGGCTTTTGATCCAAAGAGTATACGGAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCCCAGTGTTTTGGATaGTTTTCACTCGTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSQCFG*FSLVWL
Trigger: TAACCAAACGAGTGAAAACCATCCAAAACACTGGGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATCATCATCATCATCTaGGTCAGATTCATAGTAGAC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGIIIII*VRFIVD
Trigger: GTCTACTATGAATCTGACTCAGATGATGATGATGAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTTAGAATATCCAGTTaGGTGAGTTTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFRISS*VSFFSS
Trigger: GGAGGAAAAGAAACTCACTCAACTGGATATTCTAAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR TCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCGTCGTTTTGTATTTaGAGTCACTCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSSFCI*SHSLSH
Trigger: ATGAGATAGAGAGTGACTTCAAATACAAAACGACGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGATTCCTCAATCTTATaGATGACTGACTGTACTGAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGDSSIL*MTDCTD
Trigger: ATCAGTACAGTCAGTCATCCATAAGATTGAGGAATC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTGATGCGAATAAGTTaGTCGCATTTTTCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLMRIS*SHFSSD
Trigger: ATCCGAAGAAAAATGCGACCAACTTATTCGCATCAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CCA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGAACATCCAATTCCTaGAATTTCTTAGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGTSNS*NFLGEK
Trigger: TTTTTCTCCTAAGAAATTCCAGGAATTGGATGTTCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 90 bp CTTCTGCAAAGGCTGGGCCTGACTGGGTGTGAGGGGTGGCAGCTTTaGCTTGGCAGGCTCAACTGCCTGGGGCTGCTTGGGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LLQRLGLTGCEGWQL*LGRLNCLGLLGSEG
Trigger: CCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACCCCTCACACCCAGTCAGGCCCAGCCTTTGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp GGGGTTAGTGTGGTCGGCTGTGGGGTCGGAGTGATGCCCAGGGCCTaGGCCTGCTCAGGGCTGAGAGTGATTGACTCACGGTTCGGAGTG +
Preference number: 5 (lower is better)
Translates to: GVSVVGCGVGVMPRA*ACSGLRVIDSRFGV
Trigger: CACTCCGAACCGTGAGTCAATCACTCTCAGCCCTGAGCAGGCCCAGGCCCTGGGCATCACTCCGACCCCACAGCCGACCACACTAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TCCGTGGCCCCCATTACACCAGGCTCCACCTGGAGCGCCTGCGCCTaGCTTATCTGCGGTTTCGGGGCCTTCATCAGCCTGGGAGTTAGA +
Preference number: 5 (lower is better)
Translates to: SVAPITPGSTWSACA*LICGFGAFISLGVR
Trigger: TCTAACTCCCAGGCTGATGAAGGCCCCGAAACCGCAGATAAGTCAGGCGCAGGCGCTCCAGGTGGAGCCTGGTGTAATGGGGGCCACGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CTGGGTGTGAGGGGTGGCAGCTTTGCCTTGGCAGGCTCAACTGCCTaGGGCTGCTTGGGAGTGAGGGGAGAGATTCCCAATTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGVRGGSFALAGSTA*GCLGVRGEIPNSFS
Trigger: GGAGAAAGAATTGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACCCCTCACACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp GTGAGCCTGTGCTGCCTGGAATCAGCTGCTCAGATCTGCCCTTCTTaGGTTGTTCCCACATGGGACTTGGTCCCCCTCTGCCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: VSLCCLESAAQICPS*VVPTWDLVPLCLAR
Trigger: CCGAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAGCACAGGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CTCTTTGCCTTGGCCTGCTCAACTGTGAGAATTATCCCTAGGGAGTaGGCCTCCTCAGGGGTCAGACTGATCCCCTTGGCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LFALACSTVRIIPRE*ASSGVRLIPLALAC
Trigger: GCAGGCCAAGGCCAAGGGGATCAGTCTGACCCCTGAGGAGGCCCACTCCCTAGGGATAATTCTCACAGTTGAGCAGGCCAAGGCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CTCTGTGCCTTGGCCTGCTCAACTGTGAGAATTATCCCTAGGGAGTaGGCCTCCTCAGGGGTCAGACTGATCCCCTTTGCCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCALACSTVRIIPRE*ASSGVRLIPFACSG
Trigger: CCCTGAGCAGGCAAAGGGGATCAGTCTGACCCCTGAGGAGGCCCACTCCCTAGGGATAATTCTCACAGTTGAGCAGGCCAAGGCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp GCCAACGTGGCAGGCTTCTCCAAGGTAAAAGGGCTGGGAAATGCCTaGGCTGGCTGGCGAGCAGTAATCCCCAGGGCTTGCAGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: ANVAGFSKVKGLGNA*AGWRAVIPRACSCL
Trigger: TAAGCAACTGCAAGCCCTGGGGATTACTGCTCGCCAGCCAGCTCAGGCATTTCCCAGCCCTTTTACCTTGGAGAAGCCTGCCACGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp AGCAGAGCCTCCAGAAACAAGTCCTGGCACCTCTCCAGAGGTGGGTaGGACTCTAGGTTTGAAGAAATGCCTAGGACCAAGGGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRASRNKSWHLSRGG*DSRFEEMPRTKGWP
Trigger: GGGCCACCCCTTGGTCCTAGGCATTTCTTCAAACCTAGAGTCCCACCCACCTCTGGAGAGGTGCCAGGACTTGTTTCTGGAGGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp AACCTCAGACTTGGCGCCGACCGCCCCCTGCTTAGGAAGCATCCGTaGCAGTGCTCCCTTTGGCTGTTTCTTGGGCTTCTCTTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: NLRLGADRPLLRKHP*QCSLWLFLGLLFRL
Trigger: CAACCTAAAGAGAAGCCCAAGAAACAGCCAAAGGGAGCACTGTCACGGATGCTTCCTAAGCAGGGGGCGGTCGGCGCCAAGTCTGAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp GGGGGACACTATCATCTTGGCTTCTCTGGTACTAGAAACAGGGGTTaGTGTCCAGGGCTTGTCTATCGGCGGGAGCCATGGTTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: GGHYHLGFSGTRNRG*CPGLVYRREPWFLA
Trigger: GGCCAGAAACCATGGCTCCCGCCGATAGACAAGCCCTGGACACCAACCCCTGTTTCTAGTACCAGAGAAGCCAAGATGATAGTGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp CCTCTGCATCTCCCAGGTCCTGAACCTGGTGGCCTTGTGAGTCTTTaGATGCTTGCATCCACACCTCCAGCAGCTCCGTTTTGTCCTTCG +
Preference number: 5 (lower is better)
Translates to: PLHLPGPEPGGLVSL*MLASTPPAAPFCPS
Trigger: CGAAGGACAAAACGGAGCTGCTGGAGGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAGATGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 90 bp CCCCTTTCAAGCTGGCTGAAGAACTGCGTCATAGACCGTAGGCACTaGTTTCGTCTCTGTTCCAGCTGCTTCTGCTTGTCCGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PLSSWLKNCVIDRRH*FRLCSSCFCLSVQL
Trigger: CAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTATGACGCAGTTCTTCAGCCAGCTTGAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp GAGCCCCTTCACTGGAAGATGGGTCCCATGTCACTGTGGAGCTTTTaGTCCCTTCCTTCTGGGAGTCGTCTGTCTTTCCTTCCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: EPLHWKMGPMSLWSF*SLPSGSRLSFLPSQ
Trigger: CTGAGAGGGAAGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTGAAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CTGCATCCGGAGCCCCTTCACTGGAAGATGGGTCCCATGTCACTGTaGAGCTTTTGGTCCCTTCCTTCTGGGAGTCGTCTGTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LHPEPLHWKMGPMSL*SFWSLPSGSRLSFL
Trigger: AAGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTGAAGGGGCTCCGGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CTCAACTTGCTGCTTAGCTGCATCCGGAGCCCCTTCACTGGAAGATaGGTCCCATGTCACTGTGGAGCTTTTGGTCCCTTCCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LNLLLSCIRSPFTGR*VPCHCGAFGPFLLG
Trigger: TCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTGAAGGGGCTCCGGATGCAGCTAAGCAGCAAGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp GGCTTTCTGGAGAGTGATGGTGAACAGCAGTGTTTGTGTGAGCTCTaGAGCAAGCTGCTTCTGCAAAGGCTGGGCCTGACTGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: GFLESDGEQQCLCEL*SKLLLQRLGLTGCE
Trigger: CTCACACCCAGTCAGGCCCAGCCTTTGCAGAAGCAGCTTGCTCCAGAGCTCACACAAACACTGCTGTTCACCATCACTCTCCAGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp CATTGGGAGCTCCTCATGGGCAGCAGAGCCTCCAGAAACAAGTCCTaGCACCTCTCCAGAGGTGGGTGGGACTCTAGGTTTGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: HWELLMGSRASRNKS*HLSRGGWDSRFEEM
Trigger: CATTTCTTCAAACCTAGAGTCCCACCCACCTCTGGAGAGGTGCCAGGACTTGTTTCTGGAGGCTCTGCTGCCCATGAGGAGCTCCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TCGCTCCACTTCGGCTTTTCTGCATCCTCTGCATCTCCCAGGTCCTaGACCTGGTGGCCTTGTGAGTCTTTGAATGCTTGCATCCACACC +
Preference number: 5 (lower is better)
Translates to: SLHFGFSASSASPRS*TWWPCESLNACIHT
Trigger: GGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAGATGCAGAGGATGCAGAAAAGCCGAAGTGGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 90 bp GTGGACTCTCTACTCTCTGGTGAGCCTGTGCTGCCTGGAATCAGCTaGTCAGATCTGCCCTTCTTGAGTTGTTCCCACATGGGACTTGGT +
Preference number: 5 (lower is better)
Translates to: VDSLLSGEPVLPGIS*SDLPFLSCSHMGLG
Trigger: ACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAGCACAGGCTCACCAGAGAGTAGAGAGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TTCTGCATCCTCTGCATCTCCCAGGTCCTGAACCTGGTGGCCTTGTaGGTCTTTGAATGCTTGCATCCACACCTCCAGCAGCTCCGTTTT +
Preference number: 5 (lower is better)
Translates to: FCILCISQVLNLVAL*VFECLHPHLQQLRF
Trigger: AAAACGGAGCTGCTGGAGGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAGATGCAGAGGATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp AGGACCACTCAAAGTTTGTGCCTGCTCAGAGGTGAGAGATGCCATTaGAAGCTGAGGGGACATCTGAGGGCCTATTATCTGGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RTTQSLCLLRGERCH*KLRGHLRAYYLGLL
Trigger: GAGCAGGCCCAGATAATAGGCCCTCAGATGTCCCCTCAGCTTTCAATGGCATCTCTCACCTCTGAGCAGGCACAAACTTTGAGTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 90 bp AACTGCGTCATAGACCGTAGGCACTGCTTTCGTCTCTGTTCCAGCTaGTTCTGCTTGTCCGTCCAGCTGTGCATCACCTTCTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: NCVIDRRHCFRLCSS*FCLSVQLCITFFWY
Trigger: GTACCAGAAGAAGGTGATGCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTATGACGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp AAGGTCTCCTCTGTCAGTGGCAGGCCTTTGAGTTTTATCTGGTCTTaGGGGGCCTCAGCTTTGTCCTCAACTTGCTGCTTAGCTGCATCC +
Preference number: 5 (lower is better)
Translates to: KVSSVSGRPLSFIWS*GASALSSTCCLAAS
Trigger: GGATGCAGCTAAGCAGCAAGTTGAGGACAAAGCTGAGGCCCCCCAAGACCAGATAAAACTCAAAGGCCTGCCACTGACAGAGGAGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGGGCCTCAGCCTGTaGAGGGCTCAGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQGLSL*RAQTDL
Trigger: CAGGTCAGTCTGAGCCCTCAACAGGCTGAGGCCCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGATCCCCTTGGCCTaGGCCTGCTCAGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLIPLA*ACSGLT
Trigger: TGTCAGCCCTGAGCAGGCCAAGGCCAAGGGGATCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTCAGACTGATCCCCTaGGCCTTGGCCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVRLIP*ALACSG
Trigger: CCCTGAGCAGGCCAAGGCCAAGGGGATCAGTCTGAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGGCAGCTTTGCCTaGGCAGGCTCAACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGGSFA*AGSTAW
Trigger: CCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp GATACTGTGCAGGGAGTGCAGAAGTTTGTGCCGCCTGATTTAATGTaGCCAGGTTCTTCCTCTGAGCCTCCACATCGACGACATAGCCGT +
Preference number: 5 (lower is better)
Translates to: DTVQGVQKFVPPDLM*PGSSSEPPHRRHSR
Trigger: ACGGCTATGTCGTCGATGTGGAGGCTCAGAGGAAGAACCTGGTCACATTAAATCAGGCGGCACAAACTTCTGCACTCCCTGCACAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGGTCCCCCTCTGCCTaGCTCGGCCTTTGCTTTACC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGWSPSA*LGLCFT
Trigger: GGTAAAGCAAAGGCCGAGCAAGGCAGAGGGGGACCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTTCCCACATGGGACTaGGTCCCCCTCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVPTWD*VPLCLA
Trigger: AGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACCCAGGGCCTTGGCTaGCTCGGGCGTGAGATTAGT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTQGLG*LGREIS
Trigger: ACTAATCTCACGCCCGAGCAAGCCAAGGCCCTGGGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGTTCGCCAAGGCCTaGGCCTGCTCAGGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVFAKA*ACSGVS
Trigger: ACTAACCCCTGAGCAGGCCAAGGCCTTGGCGAACAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGTGAGCCCCAGAGCTaGGGCCTGCTCTGGACTAAG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSEPQS*GLLWTK
Trigger: CTTAGTCCAGAGCAGGCCCAAGCTCTGGGGCTCACT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACTGCCTGGGGCTGCTaGGGAGTGAGGGGAGAGATT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTAWGC*GVRGEI
Trigger: AATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp AGGCTTCTCTCTAGAAAGGGCTTTCTCATCAATGAGAGGGGACTGTaGCCGAGCTATCCCGGAGCTGGTGCCATAAGGCTGAAATATTCC +
Preference number: 5 (lower is better)
Translates to: RLLSRKGFLINERGL*PSYPGAGAIRLKYS
Trigger: GGAATATTTCAGCCTTATGGCACCAGCTCCGGGATAGCTCGGTCACAGTCCCCTCTCATTGATGAGAAAGCCCTTTCTAGAGAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGAGGAGAGAGTGAGTTaGGGCTGCTGTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGEERVS*GCCSSV
Trigger: CACGGAGGAACAGCAGCCCAAACTCACTCTCTCCTC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTAGCCCCAAGCTCTaGCTCCTGCCCTGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSPKL*LLPCCE
Trigger: TTCACAGCAGGGCAGGAGCAAGAGCTTGGGGCTAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTATTGCCTGGGGCTGCTaGGGAGTGAGGGGAGAGATT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGIAWGC*GVRGEI
Trigger: AATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAAT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTCACTGTGGAGCTTTaGGTCCCTTCCTTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVTVEL*VPSFWE
Trigger: CTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCCAGCAGCTCCGTTTaGTCCTTCGTCCTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSSSSV*SFVLSP
Trigger: AGGACTGAGGACGAAGGACAAAACGGAGCTGCTGGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGCACTTGGTGGGGCTTaGGAGAAACGAAGGGGATTC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGALGGA*EKRRGF
Trigger: GAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTGC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCAGGGACATGCACTaGGTGGGGCTTTGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLRDMH*VGLWRN
Trigger: GTTTCTCCAAAGCCCCACCAAGTGCATGTCCCTGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCCAGGTCCTGAGCTaGCTGAGGGGTCAGATTAAT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPQVLS*LRGQIN
Trigger: ATTAATCTGACCCCTCAGCAAGCTCAGGACCTGGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TTAGACTGTGACCGGATGGAAGCAAGAGATTTTCTGAAGGTCGACTaGATGTCTAACTGCAGCAGCTTGGGAATATCTGGGTACCCACCC +
Preference number: 5 (lower is better)
Translates to: LDCDRMEARDFLKVD*MSNCSSLGISGYPP
Trigger: GGGTGGGTACCCAGATATTCCCAAGCTGCTGCAGTTAGACATTCAGTCGACCTTCAGAAAATCTCTTGCTTCCATCCGGTCACAGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS GCA 90 bp TCTTTTTCTGGCTTTCTGAGCTGGAACCCTTCCTCCCAGGGGACATaGTGTCGATATTATACCGAGTCATTATCAGCTCCACGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SFSGFLSWNPSSQGT*CRYYTESLSAPRCS
Trigger: TGAGCAACGTGGAGCTGATAATGACTCGGTATAATATCGACAGCATGTCCCCTGGGAGGAAGGGTTCCAGCTCAGAAAGCCAGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 90 bp TCTTTCTCCTTTCTCTTTGAAGGTGGAGTTACAATTGCCTGGGGCTaGTTGGGAGTGAGGGGAGAGATTCCCATTTCTGTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SFSFLFEGGVTIAWG*LGVRGEIPISVSFV
Trigger: GACAAAGGAGACAGAAATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAGAAAGGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGGGCCTTGGAGAGATaGATGACTGTGGTGGACATG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGRALER*MTVVDM
Trigger: CATGTCCACCACAGTCATCAATCTCTCCAAGGCCCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACGGTGTTCAGGGCCTaGGAGAGATTGATGACTGTG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTVFRA*ERLMTV
Trigger: CACAGTCATCAATCTCTCCAAGGCCCTGAACACCGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGACAGTGCTCCCTTaGGCTGTTTCTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVTVLP*AVSWAS
Trigger: AGAAGCCCAAGAAACAGCCAAAGGGAGCACTGTCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTCTGGGACTTAGTTaGCTCAGGGGTGAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPLGLS*LRGESD
Trigger: ATCACTCTCACCCCTGAGCAAACTAAGTCCCAGAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTCTGTGCCTTGACTaGCTCAGGAGTGAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPLCLD*LRSESD
Trigger: ATCACTCTCACTCCTGAGCAAGTCAAGGCACAGAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTGACCCTCTGTGCCTaGACTTGCTCAGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLTLCA*TCSGVR
Trigger: TCTCACTCCTGAGCAAGTCAAGGCACAGAGGGTCAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTGGACCTGGTACTGTaGAGGGATCAGATTGACCCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVDLVL*RDQIDP
Trigger: AGGGTCAATCTGATCCCTCAACAGTACCAGGTCCAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGAACAGCAGTGTTaGTGTGAGCTCTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGEQQC*CELWSK
Trigger: CTTGCTCCAGAGCTCACACAAACACTGCTGTTCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCCAGGGCTTGCAGTaGCTTAGTGGTAGTGATGTT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPQGLQ*LSGSDV
Trigger: AACATCACTACCACTAAGCAACTGCAAGCCCTGGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp TTGTCTTGCTCAGGAGTGGGAGTGGTTTCTTGTTCCAGGATCTGCTaGAAGGGTGGAATTGTTCTTTGGGTATCTGTGACTCCAGATATC +
Preference number: 5 (lower is better)
Translates to: LSCSGVGVVSCSRIC*KGGIVLWVSVTPDI
Trigger: GATATCTGGAGTCACAGATACCCAAAGAACAATTCCACCCTTCCAGCAGATCCTGGAACAAGAAACCACTCCCACTCCTGAGCAAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp TCGTGTACAAGCTCTGAACCTCGTACCCTTTCCCAGTGTTTTGGATaGTTTTCACTCGTTTGGTTAGGTGGTTTCTGGCAAGCTGGATCA +
Preference number: 5 (lower is better)
Translates to: SCTSSEPRTLSQCFG*FSLVWLGGFWQAGS
Trigger: TGATCCAGCTTGCCAGAAACCACCTAACCAAACGAGTGAAAACCATCCAAAACACTGGGAAAGGGTACGAGGTTCAGAGCTTGTACACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp GTAAATCCGGGTATCTTCTTAAAGCTGGGGATCGAAGGCATGGGCTaGCTAAGACTGAGTTTATATCCCCTTTCAAGCTGGCTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: VNPGIFLKLGIEGMG*LRLSLYPLSSWLKN
Trigger: GTTCTTCAGCCAGCTTGAAAGGGGATATAAACTCAGTCTTAGCCAGCCCATGCCTTCGATCCCCAGCTTTAAGAAGATACCCGGATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTAACTGCAGCAGCTaGGGAATATCTGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSNCSS*GISGYP
Trigger: TGGGTACCCAGATATTCCCAAGCTGCTGCAGTTAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGCCTTGCTCGGCCTTaGCTTTACCCACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCLARP*LYPLSS
Trigger: AGAAGAAAGTGGGTAAAGCAAAGGCCGAGCAAGGCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCAGATCTGCCCTTCTaGAGTTGTTCCCACATGGGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSDLPF*SCSHMG
Trigger: TCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGGCCTTGTGAGTCTTaGAATGCTTGCATCCACACC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGWPCES*NACIHT
Trigger: GGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCCTGGGAGTTAGATaGATGGAGGTCTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLGVR*MEVLLT
Trigger: TGTCAGCAAGACCTCCATCAATCTAACTCCCAGGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGTAATCCTTGGTTCCTaGTCTTGCTCAGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGVILGS*SCSGVG
Trigger: TCCCACTCCTGAGCAAGACAAGGAACCAAGGATTAC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGTGGGACTCTAGGTTaGAAGAAATGCCTAGGACCA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGGTLG*KKCLGP
Trigger: TGGTCCTAGGCATTTCTTCAAACCTAGAGTCCCACC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp CGTGACAGTGCTCCCTTTGGCTGTTTCTTGGGCTTCTCTTTAGGTTaGACCTTTCTTTCATCTCTGTATGTCCTCAAGGCTACAGTCACA +
Preference number: 5 (lower is better)
Translates to: RDSAPFGCFLGFSLG*TFLSSLYVLKATVT
Trigger: TGTGACTGTAGCCTTGAGGACATACAGAGATGAAAGAAAGGTTCAACCTAAAGAGAAGCCCAAGAAACAGCCAAAGGGAGCACTGTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp CTCTTCAGTAGTCACTTGGGAGATCTGCACTGCCTCAGGTTTTTCTaGTATGAGAGACTCCTTTGGAGTCTGTGTCGGCTTAAGAATCCT +
Preference number: 5 (lower is better)
Translates to: LFSSHLGDLHCLRFF*YERLLWSLCRLKNP
Trigger: AGGATTCTTAAGCCGACACAGACTCCAAAGGAGTCTCTCATATCAGAAAAACCTGAGGCAGTGCAGATCTCCCAAGTGACTACTGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TTCTCTTTGAAGGTGGAGTTACAATTGCCTGGGGCTGCTTGGGAGTaGGGGGAGAGATTCCCATTTCTGTCTCCTTTGTCTTTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: FSLKVELQLPGAAWE*GERFPFLSPLSLKV
Trigger: TACTTTCAAAGACAAAGGAGACAGAAATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 90 bp TCCCAGTGTTTTGGATGGTTTTCACTCGTTTGGTTAGGTGGTTTCTaGCAAGCTGGATCAGCCTATAGGCAACATACTTTCGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: SQCFGWFSLVWLGGF*QAGSAYRQHTFGTD
Trigger: ATCTGTCCCGAAAGTATGTTGCCTATAGGCTGATCCAGCTTGCCAGAAACCACCTAACCAAACGAGTGAAAACCATCCAAAACACTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCCAGGACAGAATCTaGGAGAGAGTCCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSQDRI*ERVLSL
Trigger: TAGAGAAAGGACTCTCTCCAAGATTCTGTCCTGGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGTGGAATTGTTCTTaGGGTATCTGTGACTCCAGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGWNCS*GICDSR
Trigger: TCTGGAGTCACAGATACCCAAAGAACAATTCCACCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGATTCTGTCCTCTTaGTACTGCTCAGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLILSS*YCSGVR
Trigger: TCTCACTCCTGAGCAGTACAAAGAGGACAGAATCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCGTGAGATTAGTTCTTaGTGCTTCAGCCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGREISS*CFSLLS
Trigger: ACTCAGCAGGCTGAAGCACAAAGAACTAATCTCACG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCAGGTCCTGAGCTTGTaGAGGGGTCAAATTAATCCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGQVLSL*RGQINP
Trigger: AGGATTAATTTGACCCCTCAACAAGCTCAGGACCTG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGGACACTATCATCTaGGCTTCTCTGGTACTAGAA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGDTII*ASLVLE
Trigger: TTCTAGTACCAGAGAAGCCAAGATGATAGTGTCCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TCCTGCCCTGCTGTGAAAGCAGTCTTTAATTCTATAGTGTGTTCATaGGTAAGAGGACCACTCAAAGTTTGTGCCTGCTCAGAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SCPAVKAVFNSIVCS*VRGPLKVCACSEVR
Trigger: TCTCACCTCTGAGCAGGCACAAACTTTGAGTGGTCCTCTTACTCATGAACACACTATAGAATTAAAGACTGCTTTCACAGCAGGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp GCGACAGCTGGTTTGGGGATTTGGATAGACTCAGAGATAAGGATTTaGCTTCTCTGGGCTTCAAGTTGCTTCTTAGAAAGATGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ATAGLGIWIDSEIRI*LLWASSCFLERWLL
Trigger: AAGGAGCCATCTTTCTAAGAAGCAACTTGAAGCCCAGAGAAGTCAAATCCTTATCTCTGAGTCTATCCAAATCCCCAAACCAGCTGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TTCTTCTGGTACTGGTCAATCCTATCAAGCATCGTGTACAAGCTCTaGACCTCGTACCCTTTCCCAGTGTTTTGGATGGTTTTCACTCGT +
Preference number: 5 (lower is better)
Translates to: FFWYWSILSSIVYKL*TSYPFPVFWMVFTR
Trigger: ACGAGTGAAAACCATCCAAAACACTGGGAAAGGGTACGAGGTTCAGAGCTTGTACACGATGCTTGATAGGATTGACCAGTACCAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGTGGATTATCACGGTaGCTTATGGGCTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSGLSR*LMGFLN
Trigger: GTTGAGAAAGCCCATAAGCAACCGTGATAATCCACT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTGCTGGGATCTCAAATaGCAAGCTCAGTGGATTATC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGCWDLK*QAQWII
Trigger: GATAATCCACTGAGCTTGCAATTTGAGATCCCAGCA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTCCTTATCTTCCTCTaGCTCTTCCTTCAGAACAGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLLIFL*LFLQNR
Trigger: TCTGTTCTGAAGGAAGAGCAAGAGGAAGATAAGGAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGATCTCTTGTTGTTaGGGAATGAGAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLISCC*GMREIP
Trigger: GGGGATTTCTCTCATTCCCAAACAACAAGAGATCAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCTCTGGGCTTCAAGTaGCTTCTTAGAAAGATGGCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSLGFK*LLRKMA
Trigger: AGCCATCTTTCTAAGAAGCAACTTGAAGCCCAGAGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAGCTGGTTTGGGGATTaGGATAGACTCAGAGATAAG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSWFGD*DRLRDK
Trigger: CTTATCTCTGAGTCTATCCAAATCCCCAAACCAGCT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCCTTTCCCAGTGTTTaGGATGGTTTTCACTCGTTT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPFPSV*DGFHSF
Trigger: AAACGAGTGAAAACCATCCAAAACACTGGGAAAGGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp ATCTCTGAAACCTTAGCGTTTAAGCCGATCTGGTCAAAAATCATCTaGTCTAGTCTTAAAGCTTGGGCTGTGGCAGGCCGCTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: ISETLAFKPIWSKII*SSLKAWAVAGRFIA
Trigger: AGCTATAAAGCGGCCTGCCACAGCCCAAGCTTTAAGACTAGATCAGATGATTTTTGACCAGATCGGCTTAAACGCTAAGGTTTCAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCCTTCCGTATACTCTTaGGATCAAAAGCCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGPSVYS*DQKPFL
Trigger: TAGGAAAGGCTTTTGATCCAAAGAGTATACGGAAGG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGGCTTCTCTTTAGGTaGAACCTTTCTTTCATCTCT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGLLFR*NLSFIS
Trigger: AGAGATGAAAGAAAGGTTCAACCTAAAGAGAAGCCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAAACTGATCTCTTGTTaGGGAATGAGAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGKLISC*GMREIP
Trigger: GGGGATTTCTCTCATTCCCAAACAAGAGATCAGTTT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTGTCTCCTTTGTCTTaGAAAGTAGAGCTCCAAATG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSPLS*KVELQM
Trigger: CATTTGGAGCTCTACTTTCAAAGACAAAGGAGACAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTAGAGGTTTGGCTTTaGAACTTCTCTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLEVWL*NFSEVF
Trigger: GAAGACCTCAGAGAAGTTCAAAAGCCAAACCTCTAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TCAGATCTTTTGCTGTCATCAATTAATAACTCCAAGACCGGCCGCTaGAGTTTGGTAAATCCGGGTATCTTCTTAAAGCTGGGGATCGAA +
Preference number: 5 (lower is better)
Translates to: SDLLLSSINNSKTGR*SLVNPGIFLKLGIE
Trigger: TTCGATCCCCAGCTTTAAGAAGATACCCGGATTTACCAAACTTCAGCGGCCGGTCTTGGAGTTATTAATTGATGACAGCAAAAGATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAACGTGGCAAGTTCCTaGAATTCATCATCATCATCA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGNVASS*NSSSSS
Trigger: TGATGATGATGATGAATTCAAGGAACTTGCCACGTT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTTGATGCGAATAAGTaGGTCGCATTTTTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFDANK*VAFFFG
Trigger: TCCGAAGAAAAATGCGACCAACTTATTCGCATCAAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTGGCTCCTTAGTGCTTTaGTTTGTCTATAGGTTAATG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGGSLVL*FVYRLM
Trigger: CATTAACCTATAGACAAACAAAAGCACTAAGGAGCC...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTCTTTCTCCTTTCTCTTaGAAGGTGGAGTTACAATTG +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGLSPFS*KVELQL
Trigger: CAATTGTAACTCCACCTTCAAAGAGAAAGGAGAAAG...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACTTACCAGACCGTTTaGTTTCTTCAGTTTTTGCTA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTYQTV*FLQFLL
Trigger: TAGCAAAAACTGAAGAAACAAAACGGTCTGGTAAGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTTCGTCGTTTTGTATTaGAAGTCACTCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGFVVLY*KSLSIS
Trigger: TGAGATAGAGAGTGACTTCAAATACAAAACGACGAA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTAAGACTGATCTCCTGTaGTTTAGGAATGAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGKTDLL*FRNERN
Trigger: ATTTCTCTCATTCCTAAACAACAGGAGATCAGTCTT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTACTAAAACTGATCTCTaGTTGTTTGGGAATGAGAGA +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGTKTDL*LFGNER
Trigger: TCTCTCATTCCCAAACAACAAGAGATCAGTTTTAGT...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS-3UTR CAA 90 bp AAAAGGCATTTTACTGAACCATTGAAATCCGCTCTCTACGTGCCTGGCTTGGGTTCGATTATGAGATTCTaGGCAATTGTGAGATACTGT +
Preference number: 5 (lower is better)
Translates to: KRHFTEPLKSALYVPGLGSIMRF*AIVRYC
Trigger: ACAGTATCTCACAATTGCCAAGAATCTCATAATCGA...ACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAGTAAAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 90 bp TTCCACTTTGTTTCTGGTTTTTGTAGCTCTGGGGTACCCTCAGGCTaGAGCAGATCTATTTCACTCTTGGCTTCTTTGTCTGTTAATTTA +
Preference number: 5 (lower is better)
Translates to: FHFVSGFCSSGVPSG*SRSISLLASLSVNL
Trigger: TAAATTAACAGACAAAGAAGCCAAGAGTGAAATAGATCTGCTTCAGCCTGAGGGTACCCCAGAGCTACAAAAACCAGAAACAAAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp AGGCTGGGCCTGACTGGGTGTGAGGGGTGGCAGCTTTaGCTTGGCAGGCTCAACTGCCTGGGGCTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RLGLTGCEGWQL*LGRLNCLGLLG
Trigger: CCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACCCCTCACACCCAGTCAGGCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GTGATCGGCTGTGGGGTAGGAGTGATACCCAGGGCCTaGGTCTGCTCAGGGGTTAGTGTGGTCGGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: VIGCGVGVIPRA*VCSGVSVVGCG
Trigger: CCCACAGCCGACCACACTAACCCCTGAGCAGACCCAGGCCCTGGGTATCACTCCTACCCCACAGCCGATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp CTTCTGCAAAGGCTGGGCCTGACTGGGTGTGAGGGGTaGCAGCTTTGCCTTGGCAGGCTCAACTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLQRLGLTGCEG*QLCLGRLNCLG
Trigger: CCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACCCCTCACACCCAGTCAGGCCCAGCCTTTGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TGGGCCTCCTCAGGGGTCAGACTGATCCCCTTGGCCTaGGCCTGCTCAGGGCTGACAGTGATTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: WASSGVRLIPLA*ACSGLTVIPRA
Trigger: GGCTCTGGGAATCACTGTCAGCCCTGAGCAGGCCAAGGCCAAGGGGATCAGTCTGACCCCTGAGGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGGGAGTGGGCCTCCTCAGGGGTCAGACTGATCCCCTaGGCCTTGGCCTGCTCAGGGCTGACAGTGATTCCC +
Preference number: 6 (lower is better)
Translates to: REWASSGVRLIP*ALACSGLTVIP
Trigger: GGGAATCACTGTCAGCCCTGAGCAGGCCAAGGCCAAGGGGATCAGTCTGACCCCTGAGGAGGCCCACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp AGTGGTCGGCTGAGGGGTCGGAGTGATACCCAGGGCCTCAGCCTGTaGAGGGCTCAGACTGACCTGCTCAGCGGTGAGAGTGTTCGCCAA +
Preference number: 6 (lower is better)
Translates to: SGRLRGRSDTQGLSL*RAQTDLLSGESVRQ
Trigger: TTGGCGAACACTCTCACCGCTGAGCAGGTCAGTCTGAGCCCTCAACAGGCTGAGGCCCTGGGTATCACTCCGACCCCTCAGCCGACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CCCATTACACCAGGCTCCACCTGGAGCGCCTGCGCCTaGCTTATCTGCGGTTTCGGGGCCTTCATCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PITPGSTWSACA*LICGFGAFISL
Trigger: CAGGCTGATGAAGGCCCCGAAACCGCAGATAAGTCAGGCGCAGGCGCTCCAGGTGGAGCCTGGTGTAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTGAGGGGTCGGAGTGATACCCAGGGCCTCAGCCTGTaGAGGGCTCAGACTGACCTGCTCAGCGGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: LRGRSDTQGLSL*RAQTDLLSGES
Trigger: ACTCTCACCGCTGAGCAGGTCAGTCTGAGCCCTCAACAGGCTGAGGCCCTGGGTATCACTCCGACCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp CGTGGCAGGCTTCTCCAAGGTAAAAGGGCTGGGAAATaGCTGAGCTGGCTGGCGAGCAGTAATCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: RGRLLQGKRAGK*LSWLASSNPQG
Trigger: GCCCTGGGGATTACTGCTCGCCAGCCAGCTCAGGCATTTCCCAGCCCTTTTACCTTGGAGAAGCCTGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp AGGGGTGGCAGCTTTGCCTTGGCAGGCTCAACTGCCTaGGGCTGCTTGGGAGTGAGGGGAGAGATTCCCAAT +
Preference number: 6 (lower is better)
Translates to: RGGSFALAGSTA*GCLGVRGEIPN
Trigger: ATTGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp GCAGGCTTCTCCAAGGTAAAAGGGCTGGGAAATGCCTaGGCTGGCTGGCGAGCAGTAATCCCCAGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: AGFSKVKGLGNA*AGWRAVIPRAC
Trigger: GCAAGCCCTGGGGATTACTGCTCGCCAGCCAGCTCAGGCATTTCCCAGCCCTTTTACCTTGGAGAAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGGGGCCTCAGCTTTGTCCTCAACTTGCTGCTTAGCTaGATCCGGAGCCCCTTCACTGGAAGATGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GGLSFVLNLLLS*IRSPFTGRWVP
Trigger: TGGGACCCATCTTCCAGTGAAGGGGCTCCGGATGCAGCTAAGCAGCAAGTTGAGGACAAAGCTGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GTCCTGATGACCCGGCTCGCTCCACTTCGGCTTTTCTaGATCCTCTGCATCTCCCAGGTCCTGAACCTGGTG +
Preference number: 6 (lower is better)
Translates to: VLMTRLAPLRLF*ILCISQVLNLV
Trigger: CACCAGGTTCAGGACCTGGGAGATGCAGAGGATGCAGAAAAGCCGAAGTGGAGCGAGCCGGGTCATCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp GGTGAGCCTGTGCTGCCTGGAATCAGCTGCTCAGATCTGCCCTTCTaGAGTTGTTCCCACATGGGACTTGGTCCCCCTCTGCCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: GEPVLPGISCSDLPF*SCSHMGLGPPLPCS
Trigger: CGAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAGCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp AAGGGGATTCTGGAAGAGGAGAGAGTGAGTTTGGGCTaGTGTTCCTCCGTGGCCCCCATTACACCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: KGILEEERVSLG*CSSVAPITPGS
Trigger: GGAGCCTGGTGTAATGGGGGCCACGGAGGAACAGCAGCCCAAACTCACTCTCTCCTCTTCCAGAATCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGCAGCTTTGCCTTGGCAGGCTCAACTGCCTGGGGCTaGTTGGGAGTGAGGGGAGAGATTCCCAATTCTTTC +
Preference number: 6 (lower is better)
Translates to: GSFALAGSTAWG*LGVRGEIPNSF
Trigger: GAAAGAATTGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp TCTCCAGAGGTGGGTGGGACTCTAGGTTTGAAGAAATaGCTAGGACCAAGGGGTGGCCCTGGAGTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: SPEVGGTLGLKK*LGPRGGPGVGG
Trigger: TCCTCCCACTCCAGGGCCACCCCTTGGTCCTAGGCATTTCTTCAAACCTAGAGTCCCACCCACCTCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TGGGCCTGCTCAGGAGTGACTGTGATTCTGTGGGCCTaGGCCTGTTCAGGAGTAAGAATGACTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: WACSGVTVILWA*ACSGVRMTPRA
Trigger: GGCTCTGGGAGTCATTCTTACTCCTGAACAGGCCCAGGCCCACAGAATCACAGTCACTCCTGAGCAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGCCTTGGCTTGCTCGGGCGTGAGATTAGTTCTTTGTaGTTCAGCCTGCTGAGTGGTGAGAGTGGTTCCGTG +
Preference number: 6 (lower is better)
Translates to: GLGLLGREISSL*FSLLSGESGSV
Trigger: CACGGAACCACTCTCACCACTCAGCAGGCTGAAGCACAAAGAACTAATCTCACGCCCGAGCAAGCCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGGGTAGGGGTGGGAATGATTCCCACAGCTTCAGCCTaGTTAAGGGTAGAAGCTATTCCCAGATCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GVGVGMIPTASA*LRVEAIPRSWA
Trigger: GGCCCAGGATCTGGGAATAGCTTCTACCCTTAAGCAGGCTGAAGCTGTGGGAATCATTCCCACCCCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GAGCCCCTTCACTGGAAGATGGGTCCCATGTCACTGTaGAGCTTTTGGTCCCTTCCTTCTGGGAGTCGTCTG +
Preference number: 6 (lower is better)
Translates to: EPLHWKMGPMSL*SFWSLPSGSRL
Trigger: CAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTGAAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp CTGGGCCTGCTCAGGGACATGCACTTGGTGGGGCTTTaGAGAAACGAAGGGGATTCTGGAAGAGGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: LGLLRDMHLVGL*RNEGDSGRGES
Trigger: ACTCTCTCCTCTTCCAGAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTGCATGTCCCTGAGCAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GCCTGGAATCAGCTGCTCAGATCTGCCCTTCTTGAGTaGTTCCCACATGGGACTTGGTCCCCCTCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: AWNQLLRSALLE*FPHGTWSPSAL
Trigger: CAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GTGCTGCCTGGAATCAGCTGCTCAGATCTGCCCTTCTaGAGTTGTTCCCACATGGGACTTGGTCCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: VLPGISCSDLPF*SCSHMGLGPPL
Trigger: CAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TGCGGTTTCGGGGCCTTCATCAGCCTGGGAGTTAGATaGATGGAGGTCTTGCTGACACCCTTCCACAGGTCC +
Preference number: 6 (lower is better)
Translates to: CGFGAFISLGVR*MEVLLTPFHRS
Trigger: GGACCTGTGGAAGGGTGTCAGCAAGACCTCCATCAATCTAACTCCCAGGCTGATGAAGGCCCCGAAACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TCTGGGCCTGCTCAGGGACATGCACTTGGTGGGGCTTaGGAGAAACGAAGGGGATTCTGGAAGAGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SGPAQGHALGGA*EKRRGFWKRRE
Trigger: CTCTCTCCTCTTCCAGAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTGCATGTCCCTGAGCAGGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TGGGCCTGTAGGGGAGTCAGACTGATTCTGTCCTCTTaGTACTGCTCAGGAGTGAGAGTGACCCCTAGGGCC +
Preference number: 6 (lower is better)
Translates to: WACRGVRLILSS*YCSGVRVTPRA
Trigger: GGCCCTAGGGGTCACTCTCACTCCTGAGCAGTACAAAGAGGACAGAATCAGTCTGACTCCCCTACAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGCTTTGCCTTGGCAGGCTCAACTGCCTGGGGCTGCTaGGGAGTGAGGGGAGAGATTCCCAATTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFALAGSTAWGC*GVRGEIPNSFS
Trigger: GGAGAAAGAATTGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGGCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp GGAGCCCCTTCACTGGAAGATGGGTCCCATGTCACTGTGGAGCTTTaGGTCCCTTCCTTCTGGGAGTCGTCTGTCTTTCCTTCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: GAPSLEDGSHVTVEL*VPSFWESSVFPSLS
Trigger: TGAGAGGGAAGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTGAAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp GTGAAAGTGATTGGCTTAGGAGGGATCAGAGGGAGACCCAGGGCCTaGGCTTGCTCGGGCGTGAGATTAGTTCTTTGTGCTTCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: VKVIGLGGIRGRPRA*ACSGVRLVLCASAC
Trigger: GCAGGCTGAAGCACAAAGAACTAATCTCACGCCCGAGCAAGCCAAGGCCCTGGGTCTCCCTCTGATCCCTCCTAAGCCAATCACTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp TGCTGCCACCTGCTCAGAGGTGAGGGTGACAGCTGCTGCCTGAGTTaGTTCGTAGGTAAAAGTGACACCCAAGTGCTGGGCTTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: CCHLLRGEGDSCCLS*FVGKSDTQVLGFLE
Trigger: CTCCAGAAAGCCCAGCACTTGGGTGTCACTTTTACCTACGAACAAACTCAGGCAGCAGCTGTCACCCTCACCTCTGAGCAGGTGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CGCACTCATCGGTGCCTTCTCTATTATTGGGTAGCTTaGCGTAGACAGGTCAGCGTTCCACACGGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RTHRCLLYYWVA*RRQVSVPHGLH
Trigger: GTGGAGGCCGTGTGGAACGCTGACCTGTCTACGTCAAGCTACCCAATAATAGAGAAGGCACCGATGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS TCA 72 bp CTCCCAGGTCCTGAACCTGGTGGCCTTGTGAGTCTTTaGATGCTTGCATCCACACCTCCAGCAGCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: LPGPEPGGLVSL*MLASTPPAAPF
Trigger: AAACGGAGCTGCTGGAGGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CTCTGCATCTCCCAGGTCCTGAACCTGGTGGCCTTGTaGGTCTTTGAATGCTTGCATCCACACCTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LCISQVLNLVAL*VFECLHPHLQQ
Trigger: CTGCTGGAGGTGTGGATGCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAGATGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CCTTGGCAGGCTCAACTGCCTGGGGCTGCTTGGGAGTaGGGGGAGAGATTCCCAATTCTTTCTCCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: PWQAQLPGAAWE*GERFPILSPFS
Trigger: AGAGAAAGGAGAAAGAATTGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAGTTGAGCCTGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TCTGAGGTCTTCCAGGGGTTGGTAGGGCCTCTGCTGTaGAAGGATGCAGTGGGATGGAAGAGATTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SEVFQGLVGPLL*KDAVGWKRLLA
Trigger: TGCCAGCAATCTCTTCCATCCCACTGCATCCTTTCACAGCAGAGGCCCTACCAACCCCTGGAAGACCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp TGCTCAGGAGTGAGAGTGACCCCTAGGGCCCGAGCCTaGTCATGGGTTAGACTAATCCTCTGGGACTTAGTT +
Preference number: 6 (lower is better)
Translates to: CSGVRVTPRARA*SWVRLILWDLV
Trigger: AACTAAGTCCCAGAGGATTAGTCTAACCCATGAGCAGGCTCGGGCCCTAGGGGTCACTCTCACTCCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp CTTCCAGGGGTTGGTAGGGCCTCTGCTGTGAAAGGATaGAGTGGGATGGAAGAGATTGCTGGCATGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LPGVGRASAVKG*SGMEEIAGMKP
Trigger: AGGCTTCATGCCAGCAATCTCTTCCATCCCACTGCATCCTTTCACAGCAGAGGCCCTACCAACCCCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp AGATCTGCCCTTCTTGAGTTGTTCCCACATGGGACTTaGTCCCCCTCTGCCTTGCTCGGCCTTTGCTTTACC +
Preference number: 6 (lower is better)
Translates to: RSALLELFPHGT*SPSALLGLCFT
Trigger: GGTAAAGCAAAGGCCGAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGCAGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GGGCCTATTATCTGGGCCTGCTCAGGGACATGCACTTaGTGGGGCTTTGGAGAAACGAAGGGGATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: GPIIWACSGTCT*WGFGETKGILE
Trigger: TTCCAGAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTGCATGTCCCTGAGCAGGCCCAGATAATAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GAAACGAAGGGGATTCTGGAAGAGGAGAGAGTGAGTTaGGGCTGCTGTTCCTCCGTGGCCCCCATTACACCA +
Preference number: 6 (lower is better)
Translates to: ETKGILEEERVS*GCCSSVAPITP
Trigger: TGGTGTAATGGGGGCCACGGAGGAACAGCAGCCCAAACTCACTCTCTCCTCTTCCAGAATCCCCTTCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGGGCCTATTATCTGGGCCTGCTCAGGGACATGCACTaGGTGGGGCTTTGGAGAAACGAAGGGGATTCTGGA +
Preference number: 6 (lower is better)
Translates to: RAYYLGLLRDMH*VGLWRNEGDSG
Trigger: TCCAGAATCCCCTTCGTTTCTCCAAAGCCCCACCAAGTGCATGTCCCTGAGCAGGCCCAGATAATAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp ATTGGCTTAGGAGGGATCAGAGGGAGACCCAGGGCCTaGGCTTGCTCGGGCGTGAGATTAGTTCTTTGTGCT +
Preference number: 6 (lower is better)
Translates to: IGLGGIRGRPRA*ACSGVRLVLCA
Trigger: AGCACAAAGAACTAATCTCACGCCCGAGCAAGCCAAGGCCCTGGGTCTCCCTCTGATCCCTCCTAAGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTGCTCAGAGGTGAGGGTGACAGCTGCTGCCTGAGTTaGTTCGTAGGTAAAAGTGACACCCAAGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLRGEGDSCCLS*FVGKSDTQVLG
Trigger: GCCCAGCACTTGGGTGTCACTTTTACCTACGAACAAACTCAGGCAGCAGCTGTCACCCTCACCTCTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp TGTGAGTCTTTGAATGCTTGCATCCACACCTCCAGCAGCTCCGTTTaGTCCTTCGTCCTCAGTCCTGGCTCTTCCTTCTGCACAGCCGCT +
Preference number: 6 (lower is better)
Translates to: CESLNACIHTSSSSV*SFVLSPGSSFCTAA
Trigger: AGCGGCTGTGCAGAAGGAAGAGCCAGGACTGAGGACGAAGGACAAAACGGAGCTGCTGGAGGTGTGGATGCAAGCATTCAAAGACTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TCTAGAAAGGGCTTTCTCATCAATGAGAGGGGACTGTaGCCGAGCTATCCCGGAGCTGGTGCCATAAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRKGFLINERGL*PSYPGAGAIRL
Trigger: CAGCCTTATGGCACCAGCTCCGGGATAGCTCGGTCACAGTCCCCTCTCATTGATGAGAAAGCCCTTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CGGCGGGAGCCATGGTTTCTGGCCCTTTTCAGAAGTTaGGATCTGTGGTGTTTGGGGGAGTTGAGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: RREPWFLALFRS*DLWCLGELSGK
Trigger: CTTACCACTCAACTCCCCCAAACACCACAGATCTCAACTTCTGAAAAGGGCCAGAAACCATGGCTCCCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp AGTTGTTCCCACATGGGACTTGGTCCCCCTCTGCCTTaGTCGGCCTTTGCTTTACCCACTTTCTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SCSHMGLGPPLP*SAFALPTFFLS
Trigger: GGACAAGAAGAAAGTGGGTAAAGCAAAGGCCGAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp CTACTCTCTGGTGAGCCTGTGCTGCCTGGAATCAGCTaGTCAGATCTGCCCTTCTTGAGTTGTTCCCACATG +
Preference number: 6 (lower is better)
Translates to: LLSGEPVLPGIS*SDLPFLSCSHM
Trigger: CATGTGGGAACAACTCAAGAAGGGCAGATCTGAGCAGCTGATTCCAGGCAGCACAGGCTCACCAGAGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp ATAGACCGTAGGCACTGCTTTCGTCTCTGTTCCAGCTaGTTCTGCTTGTCCGTCCAGCTGTGCATCACCTTC +
Preference number: 6 (lower is better)
Translates to: IDRRHCFRLCSS*FCLSVQLCITF
Trigger: GAAGGTGATGCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp AGCTGGCTGAAGAACTGCGTCATAGACCGTAGGCACTaGTTTCGTCTCTGTTCCAGCTGCTTCTGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SWLKNCVIDRRH*FRLCSSCFCLS
Trigger: GGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTATGACGCAGTTCTTCAGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TCCCATGTCACTGTGGAGCTTTTGGTCCCTTCCTTCTaGGAGTCGTCTGTCTTTCCTTCCCTCTCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SHVTVELLVPSF*ESSVFPSLSES
Trigger: GGACTCTGAGAGGGAAGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GAGAGTGATGGTGAACAGCAGTGTTTGTGTGAGCTCTaGAGCAAGCTGCTTCTGCAAAGGCTGGGCCTGACT +
Preference number: 6 (lower is better)
Translates to: ESDGEQQCLCEL*SKLLLQRLGLT
Trigger: AGTCAGGCCCAGCCTTTGCAGAAGCAGCTTGCTCCAGAGCTCACACAAACACTGCTGTTCACCATCACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TATCATCTTGGCTTCTCTGGTACTAGAAACAGGGGTTaGTGTCCAGGGCTTGTCTATCGGCGGGAGCCATGG +
Preference number: 6 (lower is better)
Translates to: YHLGFSGTRNRG*CPGLVYRREPW
Trigger: CCATGGCTCCCGCCGATAGACAAGCCCTGGACACCAACCCCTGTTTCTAGTACCAGAGAAGCCAAGATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTGAGTGGTGAGAGTGGTTCCGTGGACCTGGTACTGTaGAGGGATCAGATTGACCCTCTGTGCCTTGACTTG +
Preference number: 6 (lower is better)
Translates to: LSGESGSVDLVL*RDQIDPLCLDL
Trigger: CAAGTCAAGGCACAGAGGGTCAATCTGATCCCTCAACAGTACCAGGTCCACGGAACCACTCTCACCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGGCACTGCTTTCGTCTCTGTTCCAGCTGCTTCTGCTaGTCCGTCCAGCTGTGCATCACCTTCTTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: RHCFRLCSSCFC*SVQLCITFFWY
Trigger: GTACCAGAAGAAGGTGATGCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp AACATCGCTGTGCCGATGAGCTCCTGCAGCATGCCCTaGATCTCTGAAACCTTAGCGTTTAAGCCGATCTGG +
Preference number: 6 (lower is better)
Translates to: NIAVPMSSCSMP*ISETLAFKPIW
Trigger: CCAGATCGGCTTAAACGCTAAGGTTTCAGAGATTCAGGGCATGCTGCAGGAGCTCATCGGCACAGCGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TTCGGCTTTTCTGCATCCTCTGCATCTCCCAGGTCCTaGACCTGGTGGCCTTGTGAGTCTTTGAATGCTTGC +
Preference number: 6 (lower is better)
Translates to: FGFSASSASPRS*TWWPCESLNAC
Trigger: GCAAGCATTCAAAGACTCACAAGGCCACCAGGTTCAGGACCTGGGAGATGCAGAGGATGCAGAAAAGCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp AGGGTCTCCTTAGTGGGGAAACTGGTCCTCAAGGCCTaGACCTGCTCAGAGGTCAGACTTAAACGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: RVSLVGKLVLKA*TCSEVRLKRLS
Trigger: GGAAAGACGTTTAAGTCTGACCTCTGAGCAGGTTCAGGCCTTGAGGACCAGTTTCCCCACTAAGGAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CAGGGAGTGCAGAAGTTTGTGCCGCCTGATTTAATGTaGCCAGGTTCTTCCTCTGAGCCTCCACATCGACGA +
Preference number: 6 (lower is better)
Translates to: QGVQKFVPPDLM*PGSSSEPPHRR
Trigger: TCGTCGATGTGGAGGCTCAGAGGAAGAACCTGGTCACATTAAATCAGGCGGCACAAACTTCTGCACTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp CACTGGAAGATGGGTCCCATGTCACTGTGGAGCTTTTaGTCCCTTCCTTCTGGGAGTCGTCTGTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: HWKMGPMSLWSF*SLPSGSRLSFL
Trigger: AAGGAAAGACAGACGACTCCCAGAAGGAAGGGACCAAAAGCTCCACAGTGACATGGGACCCATCTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGCTTGGGCCTGCTCTGGACTAAGACTGATCTCCTGTaGTTTAGGAATGAGAGAAATCCCCAGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SLGLLWTKTDLL*FRNERNPQSLG
Trigger: GCCCAGGCTCTGGGGATTTCTCTCATTCCTAAACAACAGGAGATCAGTCTTAGTCCAGAGCAGGCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTCTTTGAAGGTGGAGTTACAATTGCCTGGGGCTGCTaGGGAGTGAGGGGAGAGATTCCCATTTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LFEGGVTIAWGC*GVRGEIPISVS
Trigger: GGAGACAGAAATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp GCCCTTCTTGAGTTGTTCCCACATGGGACTTGGTCCCCCTCTGCCTaGCTCGGCCTTTGCTTTACCCACTTTCTTCTTGTCCATTGCTTT +
Preference number: 6 (lower is better)
Translates to: ALLELFPHGTWSPSA*LGLCFTHFLLVHCF
Trigger: AAAGCAATGGACAAGAAGAAAGTGGGTAAAGCAAAGGCCGAGCAAGGCAGAGGGGGACCAAGTCCCATGTGGGAACAACTCAAGAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp ATAGACCGTAGGCACTGCTTTCGTCTCTGTTCCAGCTGCTTCTGCTaGTCCGTCCAGCTGTGCATCACCTTCTTCTGGTACTGGTCAATC +
Preference number: 6 (lower is better)
Translates to: IDRRHCFRLCSSCFC*SVQLCITFFWYWSI
Trigger: GATTGACCAGTACCAGAAGAAGGTGATGCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAGACGAAAGCAGTGCCTACGGTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGCTTTCTGAGCTGGAACCCTTCCTCCCAGGGGACATaGTGTCGATATTATACCGAGTCATTATCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GFLSWNPSSQGT*CRYYTESLSAP
Trigger: TGGAGCTGATAATGACTCGGTATAATATCGACAGCATGTCCCCTGGGAGGAAGGGTTCCAGCTCAGAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp TGCTCATGGGTTAGACTAATCCTCTGGGACTTAGTTTaGTCAGGGGTGAGAGTGATACCTAGGGCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: CSWVRLILWDLV*SGVRVIPRASV
Trigger: GACTGAGGCCCTAGGTATCACTCTCACCCCTGAGCAAACTAAGTCCCAGAGGATTAGTCTAACCCATGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp CTCTGTTCCAGCTGCTTCTGCTTGTCCGTCCAGCTGTaGATCACCTTCTTCTGGTACTGGTCAATCCTATCA +
Preference number: 6 (lower is better)
Translates to: LCSSCFCLSVQL*ITFFWYWSILS
Trigger: TGATAGGATTGACCAGTACCAGAAGAAGGTGATGCACAGCTGGACGGACAAGCAGAAGCAGCTGGAACAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TTCTGCTGGAGCATCTCGTTCTCCTCGCTGAGTTCTTaGATGACCTGCTTGGAGCGGTCTTTCTCCTTATCT +
Preference number: 6 (lower is better)
Translates to: FCWSISFSSLSS*MTCLERSFSLS
Trigger: AGATAAGGAGAAAGACCGCTCCAAGCAGGTCATCCAAGAACTCAGCGAGGAGAACGAGATGCTCCAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TCTGTCAGTGGCAGGCCTTTGAGTTTTATCTGGTCTTaGGGGGCCTCAGCTTTGTCCTCAACTTGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: SVSGRPLSFIWS*GASALSSTCCL
Trigger: TAAGCAGCAAGTTGAGGACAAAGCTGAGGCCCCCCAAGACCAGATAAAACTCAAAGGCCTGCCACTGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GGCTGGCTAAGACTGAGTTTATATCCCCTTTCAAGCTaGCTGAAGAACTGCGTCATAGACCGTAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: GWLRLSLYPLSS*LKNCVIDRRHC
Trigger: GCAGTGCCTACGGTCTATGACGCAGTTCTTCAGCCAGCTTGAAAGGGGATATAAACTCAGTCTTAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TTTCTGCTGGAGCATCTCGTTCTCCTCGCTGAGTTCTaGGATGACCTGCTTGGAGCGGTCTTTCTCCTTATC +
Preference number: 6 (lower is better)
Translates to: FLLEHLVLLAEF*DDLLGAVFLLI
Trigger: GATAAGGAGAAAGACCGCTCCAAGCAGGTCATCCAAGAACTCAGCGAGGAGAACGAGATGCTCCAGCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GCCGCCACCGCCGCCTGTGGCTGTTCCTTCGTCGTTTaGTATTTGAAGTCACTCTCTATCTCATTTAAGAGC +
Preference number: 6 (lower is better)
Translates to: AATAACGCSFVV*YLKSLSISFKS
Trigger: GCTCTTAAATGAGATAGAGAGTGACTTCAAATACAAAACGACGAAGGAACAGCCACAGGCGGCGGTGGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTGCTGACGGGTGAGAGTAATCCTTGGTTCCTTGTCTaGCTCAGGAGTGGGAGTGGTTTCTTGTTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LLTGESNPWFLV*LRSGSGFLFQD
Trigger: ATCCTGGAACAAGAAACCACTCCCACTCCTGAGCAAGACAAGGAACCAAGGATTACTCTCACCCGTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CAAAGTTTGTGCCTGCTCAGAGGTGAGAGATGCCATTaGAAGCTGAGGGGACATCTGAGGGCCTATTATCTG +
Preference number: 6 (lower is better)
Translates to: QSLCLLRGERCH*KLRGHLRAYYL
Trigger: CAGATAATAGGCCCTCAGATGTCCCCTCAGCTTTCAATGGCATCTCTCACCTCTGAGCAGGCACAAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp GGAAGGCCAGGATGGCTCTTTGAAATGATTCTAGACTaGCCTGCTCACCTTCATCAGGGGTTACTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: GRPGWLFEMILD*PAHLHQGLLKS
Trigger: TGACTTCAGTAACCCCTGATGAAGGTGAGCAGGGCAGTCTAGAATCATTTCAAAGAGCCATCCTGGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp TTTCTCTTTGAAGGTGGAGTTACAATTGCCTGGGGCTaGTTGGGAGTGAGGGGAGAGATTCCCATTTCTGTC +
Preference number: 6 (lower is better)
Translates to: FLFEGGVTIAWG*LGVRGEIPISV
Trigger: GACAGAAATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS GCA 72 bp AGGGGTAAATGGGGCTTGAGTAGGAGAAGGCCTCAATaGCTGCAGTGGAATAGAAGCAGGGTAAGAATCCTT +
Preference number: 6 (lower is better)
Translates to: RGKWGLSRRRPQ*LQWNRSRVRIL
Trigger: AAGGATTCTTACCCTGCTTCTATTCCACTGCAGGCATTGAGGCCTTCTCCTACTCAAGCCCCATTTACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TTCTCCTTTCTCTTTGAAGGTGGAGTTACAATTGCCTaGGGCTGCTTGGGAGTGAGGGGAGAGATTCCCATT +
Preference number: 6 (lower is better)
Translates to: FSFLFEGGVTIA*GCLGVRGEIPI
Trigger: AATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAGAAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GTGGTGGACATGTATTTAATGGCAGTATTTTCCAGCTaGCTGAACATCGCTGTGCCGATGAGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VVDMYLMAVFSS*LNIAVPMSSCS
Trigger: GCTGCAGGAGCTCATCGGCACAGCGATGTTCAGCAAGCTGGAAAATACTGCCATTAAATACATGTCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GACCTGCTTGGAGCGGTCTTTCTCCTTATCTTCCTCTaGCTCTTCCTTCAGAACAGACTTGACCACTCGAGA +
Preference number: 6 (lower is better)
Translates to: DLLGAVFLLIFL*LFLQNRLDHSR
Trigger: TCTCGAGTGGTCAAGTCTGTTCTGAAGGAAGAGCAAGAGGAAGATAAGGAGAAAGACCGCTCCAAGCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp ACATGGGACTTGGTCCCCCTCTGCCTTGCTCGGCCTTaGCTTTACCCACTTTCTTCTTGTCCATTGCTTTTA +
Preference number: 6 (lower is better)
Translates to: TWDLVPLCLARP*LYPLSSCPLLL
Trigger: TAAAAGCAATGGACAAGAAGAAAGTGGGTAAAGCAAAGGCCGAGCAAGGCAGAGGGGGACCAAGTCCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TGGTTCCTTGTCTTGCTCAGGAGTGGGAGTGGTTTCTaGTTCCAGGATCTGCTGGAAGGGTGGAATTGTTCT +
Preference number: 6 (lower is better)
Translates to: WFLVLLRSGSGF*FQDLLEGWNCS
Trigger: AGAACAATTCCACCCTTCCAGCAGATCCTGGAACAAGAAACCACTCCCACTCCTGAGCAAGACAAGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp GACCGGATGGAAGCAAGAGATTTTCTGAAGGTCGACTaGATGTCTAACTGCAGCAGCTTGGGAATATCTGGG +
Preference number: 6 (lower is better)
Translates to: DRMEARDFLKVD*MSNCSSLGISG
Trigger: CCCAGATATTCCCAAGCTGCTGCAGTTAGACATTCAGTCGACCTTCAGAAAATCTCTTGCTTCCATCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS TCA 72 bp AGTCACTTGGGAGATCTGCACTGCCTCAGGTTTTTCTaGTATGAGAGACTCCTTTGGAGTCTGTGTCGGCTT +
Preference number: 6 (lower is better)
Translates to: SHLGDLHCLRFF*YERLLWSLCRL
Trigger: AAGCCGACACAGACTCCAAAGGAGTCTCTCATATCAGAAAAACCTGAGGCAGTGCAGATCTCCCAAGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TCAGGAGTGGGAGTGGTTTCTTGTTCCAGGATCTGCTaGAAGGGTGGAATTGTTCTTTGGGTATCTGTGACT +
Preference number: 6 (lower is better)
Translates to: SGVGVVSCSRIC*KGGIVLWVSVT
Trigger: AGTCACAGATACCCAAAGAACAATTCCACCCTTCCAGCAGATCCTGGAACAAGAAACCACTCCCACTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TTCTGCTTGTCCGTCCAGCTGTGCATCACCTTCTTCTaGTACTGGTCAATCCTATCAAGCATCGTGTACAAG +
Preference number: 6 (lower is better)
Translates to: FCLSVQLCITFF*YWSILSSIVYK
Trigger: CTTGTACACGATGCTTGATAGGATTGACCAGTACCAGAAGAAGGTGATGCACAGCTGGACGGACAAGCAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GGTATCTTCTTAAAGCTGGGGATCGAAGGCATGGGCTaGCTAAGACTGAGTTTATATCCCCTTTCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: GIFLKLGIEGMG*LRLSLYPLSSW
Trigger: CCAGCTTGAAAGGGGATATAAACTCAGTCTTAGCCAGCCCATGCCTTCGATCCCCAGCTTTAAGAAGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GGAGCTGGTGCCATAAGGCTGAAATATTCCAAATGGTaGCACACCCAAGGCATCTTGGAGTGCTTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GAGAIRLKYSKW*HTQGILECLSL
Trigger: CAAACTCAAGCACTCCAAGATGCCTTGGGTGTGCAACCATTTGGAATATTTCAGCCTTATGGCACCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp CGAGAGCTCACGAGTTTTAGTTCATCGCTGACGGTGTTCAGGGCCTaGGAGAGATTGATGACTGTGGTGGACATGTATTTAATGGCAGTA +
Preference number: 6 (lower is better)
Translates to: RELTSFSSSLTVFRA*ERLMTVVDMYLMAV
Trigger: TACTGCCATTAAATACATGTCCACCACAGTCATCAATCTCTCCAAGGCCCTGAACACCGTCAGCGATGAACTAAAACTCGTGAGCTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp TTCTCCTTTCTCTTTGAAGGTGGAGTTACAATTGCCTGGGGCTGCTaGGGAGTGAGGGGAGAGATTCCCATTTCTGTCTCCTTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: FSFLFEGGVTIAWGC*GVRGEIPISVSFVF
Trigger: AAAGACAAAGGAGACAGAAATGGGAATCTCTCCCCTCACTCCCAAGCAGCCCCAGGCAATTGTAACTCCACCTTCAAAGAGAAAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp AGGTCAGCGTTCCACACGGCCTCCACTGAAGCTTGTCCGAGTGTTTaGAAGAGGTCAGATCTTTTGCTGTCATCAATTAATAACTCCAAG +
Preference number: 6 (lower is better)
Translates to: RSAFHTASTEACPSV*KRSDLLLSSINNSK
Trigger: CTTGGAGTTATTAATTGATGACAGCAAAAGATCTGACCTCTTCAAAACACTCGGACAAGCTTCAGTGGAGGCCGTGTGGAACGCTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS TCA 72 bp CACACCCAAGGCATCTTGGAGTGCTTGAGTTTGTTCTaGAGTGTCAGGAGTCTTAGGTATTTGGGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: HTQGILECLSLF*SVRSLRYLGLL
Trigger: GAGAAGACCCAAATACCTAAGACTCCTGACACTTCAGAACAAACTCAAGCACTCCAAGATGCCTTGGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp AGAGTCGACATTCTTGCTGATCCTTTTCAGCGTGTCTaGTATCAGCTCCATCTTCACAGTCCAGTGGTAGTA +
Preference number: 6 (lower is better)
Translates to: RVDILADPFQRV*YQLHLHSPVVV
Trigger: TACTACCACTGGACTGTGAAGATGGAGCTGATACCAGACACGCTGAAAAGGATCAGCAAGAATGTCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TGGTCGCATTTTTCTTCGGATTCTCTAAGTTTCTGCTaGAGCATCTCGTTCTCCTCGCTGAGTTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: WSHFSSDSLSFC*SISFSSLSSWM
Trigger: CATCCAAGAACTCAGCGAGGAGAACGAGATGCTCCAGCAGAAACTTAGAGAATCCGAAGAAAAATGCGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GGGAGTGGTTTCTTGTTCCAGGATCTGCTGGAAGGGTaGAATTGTTCTTTGGGTATCTGTGACTCCAGATAT +
Preference number: 6 (lower is better)
Translates to: GSGFLFQDLLEG*NCSLGICDSRY
Trigger: ATATCTGGAGTCACAGATACCCAAAGAACAATTCCACCCTTCCAGCAGATCCTGGAACAAGAAACCACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp ACCCTTTCCCAGTGTTTTGGATGGTTTTCACTCGTTTaGTTAGGTGGTTTCTGGCAAGCTGGATCAGCCTAT +
Preference number: 6 (lower is better)
Translates to: TLSQCFGWFSLV*LGGFWQAGSAY
Trigger: ATAGGCTGATCCAGCTTGCCAGAAACCACCTAACCAAACGAGTGAAAACCATCCAAAACACTGGGAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp AGTTCATCGCTGACGGTGTTCAGGGCCTTGGAGAGATaGATGACTGTGGTGGACATGTATTTAATGGCAGTA +
Preference number: 6 (lower is better)
Translates to: SSSLTVFRALER*MTVVDMYLMAV
Trigger: TACTGCCATTAAATACATGTCCACCACAGTCATCAATCTCTCCAAGGCCCTGAACACCGTCAGCGATGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TACCCTTTCCCAGTGTTTTGGATGGTTTTCACTCGTTaGGTTAGGTGGTTTCTGGCAAGCTGGATCAGCCTA +
Preference number: 6 (lower is better)
Translates to: YPFPVFWMVFTR*VRWFLASWISL
Trigger: TAGGCTGATCCAGCTTGCCAGAAACCACCTAACCAAACGAGTGAAAACCATCCAAAACACTGGGAAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp GGGGACATGCTGTCGATATTATACCGAGTCATTATCAGCTCCACGTaGCTCATTATTTCAGTCAGCCTCCAAATAACTTCCTCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: GDMLSILYRVIISST*LIISVSLQITSSLA
Trigger: GGCCAAAGAGGAAGTTATTTGGAGGCTGACTGAAATAATGAGCAACGTGGAGCTGATAATGACTCGGTATAATATCGACAGCATGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp ACGAGTTTTAGTTCATCGCTGACGGTGTTCAGGGCCTTGGAGAGATaGATGACTGTGGTGGACATGTATTTAATGGCAGTATTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSFSSSLTVFRALER*MTVVDMYLMAVFSS
Trigger: GCTGGAAAATACTGCCATTAAATACATGTCCACCACAGTCATCAATCTCTCCAAGGCCCTGAACACCGTCAGCGATGAACTAAAACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp GCTCCCTTTGGCTGTTTCTTGGGCTTCTCTTTAGGTTaGACCTTTCTTTCATCTCTGTATGTCCTCAAGGCT +
Preference number: 6 (lower is better)
Translates to: APFGCFLGFSLG*TFLSSLYVLKA
Trigger: AGCCTTGAGGACATACAGAGATGAAAGAAAGGTTCAACCTAAAGAGAAGCCCAAGAAACAGCCAAAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CCGCCGCCTGTGGCTGTTCCTTCGTCGTTTTGTATTTaGAGTCACTCTCTATCTCATTTAAGAGCATCTGTA +
Preference number: 6 (lower is better)
Translates to: PPPVAVPSSFCI*SHSLSHLRASV
Trigger: TACAGATGCTCTTAAATGAGATAGAGAGTGACTTCAAATACAAAACGACGAAGGAACAGCCACAGGCGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CCAAATGGTTGCACACCCAAGGCATCTTGGAGTGCTTaGGTTTGTTCTGAAGTGTCAGGAGTCTTAGGTATT +
Preference number: 6 (lower is better)
Translates to: PNGCTPKASWSA*VCSEVSGVLGI
Trigger: AATACCTAAGACTCCTGACACTTCAGAACAAACTCAAGCACTCCAAGATGCCTTGGGTGTGCAACCATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TACTGGTCAATCCTATCAAGCATCGTGTACAAGCTCTaGACCTCGTACCCTTTCCCAGTGTTTTGGATGGTT +
Preference number: 6 (lower is better)
Translates to: YWSILSSIVYKL*TSYPFPVFWMV
Trigger: AACCATCCAAAACACTGGGAAAGGGTACGAGGTTCAGAGCTTGTACACGATGCTTGATAGGATTGACCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp TGTTCCAGGATCTGCTGGAAGGGTGGAATTGTTCTTTaGGTATCTGTGACTCCAGATATCTCTTCAGTAGTC +
Preference number: 6 (lower is better)
Translates to: CSRICWKGGIVL*VSVTPDISSVV
Trigger: GACTACTGAAGAGATATCTGGAGTCACAGATACCCAAAGAACAATTCCACCCTTCCAGCAGATCCTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp GAAGCTTGTCCGAGTGTTTTGAAGAGGTCAGATCTTTaGCTGTCATCAATTAATAACTCCAAGACCGGCCGC +
Preference number: 6 (lower is better)
Translates to: EACPSVLKRSDL*LSSINNSKTGR
Trigger: GCGGCCGGTCTTGGAGTTATTAATTGATGACAGCAAAAGATCTGACCTCTTCAAAACACTCGGACAAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS CAA 72 bp ACCGCCGCCTGTGGCTGTTCCTTCGTCGTTTTGTATTaGAAGTCACTCTCTATCTCATTTAAGAGCATCTGT +
Preference number: 6 (lower is better)
Translates to: TAACGCSFVVLY*KSLSISFKSIC
Trigger: ACAGATGCTCTTAAATGAGATAGAGAGTGACTTCAAATACAAAACGACGAAGGAACAGCCACAGGCGGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp CAACTTCTGCTTTTCCCAGTGACGACTCCTCCTTCCGTATACTCTTaGGATCAAAAGCCTTTCCTACATTATTCGTCTTCTCTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: QLLLFPVTTPPSVYS*DQKPFLHYSSSLSG
Trigger: TCCTGAGAGAGAAGACGAATAATGTAGGAAAGGCTTTTGATCCAAAGAGTATACGGAAGGAGGAGTCGTCACTGGGAAAAGCAGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp TTGTTCCAGGATCTGCTGGAAGGGTGGAATTGTTCTTaGGGTATCTGTGACTCCAGATATCTCTTCAGTAGT +
Preference number: 6 (lower is better)
Translates to: LFQDLLEGWNCS*GICDSRYLFSS
Trigger: ACTACTGAAGAGATATCTGGAGTCACAGATACCCAAAGAACAATTCCACCCTTCCAGCAGATCCTGGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp TTCAATTGTCTGGGTATATTTAGAGGCGACAGCTGGTTTGGGGATTaGGATAGACTCAGAGATAAGGATTTGACTTCTCTGGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: FNCLGIFRGDSWFGD*DRLRDKDLTSLGFK
Trigger: CTTGAAGCCCAGAGAAGTCAAATCCTTATCTCTGAGTCTATCCAAATCCCCAAACCAGCTGTCGCCTCTAAATATACCCAGACAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TTGCTGTCATCAATTAATAACTCCAAGACCGGCCGCTaGAGTTTGGTAAATCCGGGTATCTTCTTAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLSSINNSKTGR*SLVNPGIFLKL
Trigger: CAGCTTTAAGAAGATACCCGGATTTACCAAACTTCAGCGGCCGGTCTTGGAGTTATTAATTGATGACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062631.15
ENSMUST00000100209.6
CDS TCA 72 bp GCTCTCTTCTTCTCTTCCACGAGTAATAAGGCCATTTaGATCAGAGAGTCGACATTCTTGCTGATCCTTTTC +
Preference number: 6 (lower is better)
Translates to: ALFFSSTSNKAI*IRESTFLLILF
Trigger: GAAAAGGATCAGCAAGAATGTCGACTCTCTGATTCAAATGGCCTTATTACTCGTGGAAGAGAAGAAGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GTCTCCTTTGTCTTTGAAAGTAGAGCTCCAAATGCCTaGAATGGTTGGGTAGTTAGTGGGATTTCAATTGTC +
Preference number: 6 (lower is better)
Translates to: VSFVFESRAPNA*NGWVVSGISIV
Trigger: GACAATTGAAATCCCACTAACTACCCAACCATTCCAGGCATTTGGAGCTCTACTTTCAAAGACAAAGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CGGTTGCTTATGGGCTTTCTCAACGTGGCAAGTTCCTaGAATTCATCATCATCATCATCTGAGTCAGATTCA +
Preference number: 6 (lower is better)
Translates to: RLLMGFLNVASS*NSSSSSSESDS
Trigger: TGAATCTGACTCAGATGATGATGATGATGAATTCAAGGAACTTGCCACGTTGAGAAAGCCCATAAGCAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp TCCACGTTGCTCATTATTTCAGTCAGCCTCCAAATAACTTCCTCTTaGGCCCGAAAGATATGTGATTCCTCAATCTTATGGATGACTGAC +
Preference number: 6 (lower is better)
Translates to: STLLIISVSLQITSS*ARKICDSSILWMTD
Trigger: GTCAGTCATCCATAAGATTGAGGAATCACATATCTTTCGGGCCAAAGAGGAAGTTATTTGGAGGCTGACTGAAATAATGAGCAACGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 90 bp CGGGTGTATCATCTGGCGTCCAAGATAATTTTTGATGCGAATAAGTaGGTCGCATTTTTCTTCGGATTCTCTAAGTTTCTGCTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: RVYHLASKIIFDANK*VAFFFGFSKFLLEH
Trigger: ATGCTCCAGCAGAAACTTAGAGAATCCGAAGAAAAATGCGACCAACTTATTCGCATCAAAAATTATCTTGGACGCCAGATGATACACCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CCA 72 bp GATTTCAATTGTCTGGGTATATTTAGAGGCGACAGCTaGTTTGGGGATTTGGATAGACTCAGAGATAAGGAT +
Preference number: 6 (lower is better)
Translates to: DFNCLGIFRGDS*FGDLDRLRDKD
Trigger: ATCCTTATCTCTGAGTCTATCCAAATCCCCAAACCAGCTGTCGCCTCTAAATATACCCAGACAATTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTGTCGATATTATACCGAGTCATTATCAGCTCCACGTaGCTCATTATTTCAGTCAGCCTCCAAATAACTTCC +
Preference number: 6 (lower is better)
Translates to: LSILYRVIISST*LIISVSLQITS
Trigger: GGAAGTTATTTGGAGGCTGACTGAAATAATGAGCAACGTGGAGCTGATAATGACTCGGTATAATATCGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp CGTGGCAAGTTCCTTGAATTCATCATCATCATCATCTaGGTCAGATTCATAGTAGACTTTGCTCTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: RGKFLEFIIIII*VRFIVDFALPF
Trigger: AAAAGGCAGAGCAAAGTCTACTATGAATCTGACTCAGATGATGATGATGATGAATTCAAGGAACTTGCCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TTTCGGGACAGATACCCCAGCCGAACTGTATCTATATaGAGTAATTCGATTATGAGATTCTTGGCAATTGTG +
Preference number: 6 (lower is better)
Translates to: FRDRYPSRTVSI*SNSIMRFLAIV
Trigger: CACAATTGCCAAGAATCTCATAATCGAATTACTTCATATAGATACAGTTCGGCTGGGGTATCTGTCCCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CTCATTATTTCAGTCAGCCTCCAAATAACTTCCTCTTaGGCCCGAAAGATATGTGATTCCTCAATCTTATGG +
Preference number: 6 (lower is better)
Translates to: LIISVSLQITSS*ARKICDSSILW
Trigger: CCATAAGATTGAGGAATCACATATCTTTCGGGCCAAAGAGGAAGTTATTTGGAGGCTGACTGAAATAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp TCTTCTTGTCCATTGCTTTTAGAATATCCAGTTGAGTaGGTTTCTTTTCCTCCGTTTCCAGATTTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SSCPLLLEYPVE*VSFPPFPDLCP
Trigger: TGGACACAAATCTGGAAACGGAGGAAAAGAAACTCACTCAACTGGATATTCTAAAAGCAATGGACAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS CAA 72 bp CATCTGGCGTCCAAGATAATTTTTGATGCGAATAAGTaGGTCGCATTTTTCTTCGGATTCTCTAAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: HLASKIIFDANK*VAFFFGFSKFL
Trigger: CAGAAACTTAGAGAATCCGAAGAAAAATGCGACCAACTTATTCGCATCAAAAATTATCTTGGACGCCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6
CDS TCA 72 bp ACTTTCTTCTTGTCCATTGCTTTTAGAATATCCAGTTaGGTGAGTTTCTTTTCCTCCGTTTCCAGATTTGTG +
Preference number: 6 (lower is better)
Translates to: TFFLSIAFRISS*VSFFSSVSRFV
Trigger: CACAAATCTGGAAACGGAGGAAAAGAAACTCACTCAACTGGATATTCTAAAAGCAATGGACAAGAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100209.6