Pregenerated sensors for FAM183B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049154Ensembl transcript IDs: ENSMUST00000060581.5, ENSMUST00000094156.12, ENSMUST00000238886.2, ENSMUST00000239007.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCCCTGTGCAGCATGGTaGATGAGGTTCAGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: YFSRKHIHWGIQCAGSLHPCAAW*MRFRNL Trigger: CAAGTTCCTGAACCTCATTCACCATGCTGCACAGGG...GTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCCCCTGTGCAGCATGGTaGATGAGGTTCAGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: FISLGNTYTGEFSVQVHSPCAAW*MRFRNL Trigger: CAAGTTCCTGAACCTCATTCACCATGCTGCACAGGG...GGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | ATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCCCTGTGCAGCATGGTaGATGAGGTTCAGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: IYFSRKHIHWGIQCAGSLPCAAW*MRFRNL Trigger: CAAGTTCCTGAACCTCATTCACCATGCTGCACAGGG...GAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACCCTGTGCAGCATGGTaGATGAGGTTCAGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: SIYFSRKHIHWGIQCAGSPCAAW*MRFRNL Trigger: CAAGTTCCTGAACCTCATTCACCATGCTGCACAGGG...TGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCATTCAGCCTATGGTCCTaGCGGTCTGGGTTGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIYFSRKHIHWGIQCAGSFSLWS*RSGLIK Trigger: CTTGATCAACCCAGACCGTCAGGACCATAGGCTGAA...TGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | GCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTTCCTGGTAATTGTGTaGACCTTGCGCAGGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: AFISLGNTYTGEFSVQVHFLVIV*TLRRGF Trigger: GAATCCCCTGCGCAAGGTTCACACAATTACCAGGAA...GTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCGAACTTGGCATCTTCTaGCTCCTCCAAGTTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: ISLGNTYTGEFSVQVHSTELGIF*LLQVIM Trigger: CATGATAACTTGGAGGAGCCAGAAGATGCCAAGTTC...GGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCATTCCTGGTAATTGTGTaGACCTTGCGCAGGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SIYFSRKHIHWGIQCAGSFLVIV*TLRRGF Trigger: GAATCCCCTGCGCAAGGTTCACACAATTACCAGGAA...TGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCAAGTTGATCAAGGGATTTaGGTCCCATCCAATTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FSRKHIHWGIQCAGSLHQVDQGI*VPSNFL Trigger: CAAGAAATTGGATGGGACCCAAATCCCTTGATCAAC...TTGGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CCA 90 bp | GCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACGAACTTGGCATCTTCTaGCTCCTCCAAGTTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: AFISLGNTYTGEFSVQVHELGIF*LLQVIM Trigger: CATGATAACTTGGAGGAGCCAGAAGATGCCAAGTTC...GTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCGTTGATCAAGGGATTTaGGTCCCATCCAATTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FISLGNTYTGEFSVQVHSVDQGI*VPSNFL Trigger: CAAGAAATTGGATGGGACCCAAATCCCTTGATCAAC...GGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS CCA 90 bp | GTCGTGGTAGACTCTGAAGTGGTTCAGCCTATGGTCCTGACGGTCTaGGTTGATCAAGGGATTTGGGTCCCATCCAATTTCTTGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VVVDSEVVQPMVLTV*VDQGIWVPSNFLGF Trigger: GAAGCCCAAGAAATTGGATGGGACCCAAATCCCTTGATCAACCCAGACCGTCAGGACCATAGGCTGAACCACTTCAGAGTCTACCACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCAAATGAGGTTCAGGAACTaGGCCTTGCGCAGGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: FSRKHIHWGIQCAGSLHQMRFRN*ALRRGF Trigger: GAATCCCCTGCGCAAGGCCAAGTTCCTGAACCTCAT...TTGGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060581.5 ENSMUST00000238886.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCAATGTGCCCGTAGCTCTTaGAGAAAGAGTTCCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSRKHIHWGIQCAGSLHQCARSS*RKSSRK Trigger: CTTGCGGGAACTCTTTCTCAAAGAGCTACGGGCACA...TTGGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACTGTGCCCGTAGCTCTTaGAGAAAGAGTTCCCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: YFSRKHIHWGIQCAGSLHCARSS*RKSSRK Trigger: CTTGCGGGAACTCTTTCTCAAAGAGCTACGGGCACA...GTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACATGAGGTTCAGGAACTaGGCATCTTCTGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: YFSRKHIHWGIQCAGSLHMRFRN*ASSGSS Trigger: GGAGGAGCCAGAAGATGCCAAGTTCCTGAACCTCAT...GTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCTGTGCCCGTAGCTCTTaGAGAAAGAGTTCCCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FISLGNTYTGEFSVQVHSCARSS*RKSSRK Trigger: CTTGCGGGAACTCTTTCTCAAAGAGCTACGGGCACA...GGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | AGCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCAATGAGGTTCAGGAACTaGGCCTTGCGCAGGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: SIYFSRKHIHWGIQCAGSMRFRN*ALRRGF Trigger: GAATCCCCTGCGCAAGGCCAAGTTCCTGAACCTCAT...TGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060581.5 ENSMUST00000238886.2 |
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| CDS-3UTR CAA 90 bp | AGCATTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCAATGAGGTTCAGGAACTaGGCATCTTCTGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIYFSRKHIHWGIQCAGSMRFRN*ASSGSS Trigger: GGAGGAGCCAGAAGATGCCAAGTTCCTGAACCTCAT...TGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094156.12 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | ATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCCTGAATATTTCTTTTTaGGACCCTGTGCAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: ISLGNTYTGEFSVQVHSTLNISF*DPVQHG Trigger: ACCATGCTGCACAGGGTCCAAAAAAGAAATATTCAG...GGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCAACTGAATATTTCTTTTTaGGACCCTGTGCAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: FSRKHIHWGIQCAGSLHQLNISF*DPVQHG Trigger: ACCATGCTGCACAGGGTCCAAAAAAGAAATATTCAG...TTGGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCACCTGAATATTTCTTTTTaGGACCCTGTGCAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: YFSRKHIHWGIQCAGSLHLNISF*DPVQHG Trigger: ACCATGCTGCACAGGGTCCAAAAAAGAAATATTCAG...GTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTCTAGGAAACACATACACTGGGGAATTCAGTGTGCAGGTTCACTCCCTGAATATTTCTTTTTaGGACCCTGTGCAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: FISLGNTYTGEFSVQVHSLNISF*DPVQHG Trigger: ACCATGCTGCACAGGGTCCAAAAAAGAAATATTCAG...GGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCCTAGAGAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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| CDS CCA 72 bp | GACTCTGAAGTGGTTCAGCCTATGGTCCTGACGGTCTaGGTTGATCAAGGGATTTGGGTCCCATCCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: DSEVVQPMVLTV*VDQGIWVPSNF Trigger: GAAATTGGATGGGACCCAAATCCCTTGATCAACCCAGACCGTCAGGACCATAGGCTGAACCACTTCAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060581.5 ENSMUST00000094156.12 ENSMUST00000238886.2 ENSMUST00000239007.2 |
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