Pregenerated sensors for FAM181B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051515Ensembl transcript IDs: ENSMUST00000051179.12
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGAGCTGTTTGAAGGGGATAATGACATTAAACACACTGACCTTGGCTGAACTGAAGCTGTCTTACTCTTaGCCCTTGATCATCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: GSCLKGIMTLNTLTLAELKLSYS*PLIIPP Trigger: GGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTT...CAGTTCAGCCAAGGTCAGTGTGTTTAATGTCATTATCCCCTTCAAACAGCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTCTTCGTCTGTTTTCCTaGAGATCCTTTATTAAATGG | + |
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Preference number: 2 (lower is better) Translates to: KAVLLLTLDHPTQILSLGLRLFS*RSFIKW Trigger: CCATTTAATAAAGGATCTTCAGGAAAACAGACGAAG...ACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR TCA 90 bp | ACTTGCGTTCTCCCATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCATCCGAGGCCCGGGACTaGCACCGCCTCCGCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: TCVLPSFSPLRRNPKWHASEARD*HRLRTA Trigger: GGCGGTGCGGAGGCGGTGTCAGTCCCGGGCCTCGGA...TGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATGGGAGAACGCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR GCA 90 bp | GTTCTCCCATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACCGCGGGTCTCGGAGGTaGAGTCCCCATGAGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VLPSFSPLRRNPKWHAAHRGSRR*SPHEAT Trigger: AGTGGCCTCATGGGGACTGCACCTCCGAGACCCGCG...GTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATGGGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR GCA 90 bp | CATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCGTCTCCCACAGCGCTTaGTGCTCCGAGGCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: HRSLLSEETQSGTQPTVVVSHSA*CSEARD Trigger: GTCCCGGGCCTCGGAGCAGCAAGCGCTGTGGGAGAC...GACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR GCA 90 bp | GTTCTCCCATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAAGGGTATGAAGGGGTaGGAGCTGAGCAGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLPSFSPLRRNPKWHAAHKGMKG*ELSSAA Trigger: GGCTGCGCTGCTCAGCTCGCACCCCTTCATACCCTT...GTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATGGGAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR GCA 90 bp | GGGAGCTGTTTGAAGGGGATAATGACATTAAACACACTGACCTTGGCTGAACTGCTGAGCTCACCGCGGTaGCCGCCCCGTCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GSCLKGIMTLNTLTLAELLSSPR*PPRLPQ Trigger: CTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAG...CAGTTCAGCCAAGGTCAGTGTGTTTAATGTCATTATCCCCTTCAAACAGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCATAATGCTCCCGGAGGCCGTTTaGCTGGAGCATCTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SLLSEETQSGTQPTVVIMLPEAV*LEHLQR Trigger: GCGCTGCAGATGCTCCAGCCAAACGGCCTCCGGGAG...CATTATGACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTTTTGTCCCCGTAGGACCGTaGCTCCGGCGGGGAACGGAT | + |
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Preference number: 4 (lower is better) Translates to: AVLLLTLDHPTQILSLGFVPVGP*LRRGTD Trigger: ATCCGTTCCCCGCCGGAGCCACGGTCCTACGGGGAC...AAAACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCATAATGCGCGTCCTCCCCACCTaGAGAGTCCAAGGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLSEETQSGTQPTVVIMRVLPT*RVQGCG Trigger: CCCACAGCCTTGGACTCTCCAGGTGGGGAGGACGCG...CATTATGACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR TCA 90 bp | ACTTGCGTTCTCCCATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGGAGGCTTCTTGGTCTaGGGACAGCTCGGGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TCVLPSFSPLRRNPKWHAGGFLV*GQLGVF Trigger: GAACACCCCGAGCTGTCCTCAGACCAAGAAGCCTCC...TGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATGGGAGAACGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | CATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCTTCCCAGACCCCATCTaGTCTCCAGAGGCTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HRSLLSEETQSGTQPTVVFPDPI*SPEAGV Trigger: TACCCCAGCCTCTGGAGACCAGATGGGGTCTGGGAA...GACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTTTTGAAAGAAGACAAGGCTaGCGCGTCCTCCCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: AVLLLTLDHPTQILSLGFERRQG*RVLPTW Trigger: CCAGGTGGGGAGGACGCGCCAGCCTTGTCTTCTTTC...AAAACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTTTTCTGGGAAGAAGGGGGTaGAAGAAGACAAGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: AVLLLTLDHPTQILSLGFLGRRG*KKTRLA Trigger: CGCCAGCCTTGTCTTCTTTCACCCCCTTCTTCCCAG...AAAACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTTGTTTTAATCCCATTTCGTCTTTACTTGCGTTCTCCCATCGTTCTCCAGGCTGGCGGCAGCTaGAGCCTGGGTCGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLFVLIPFRLYLRSPIVLQAGGS*SLGRLP Trigger: AGGGAGGCGACCCAGGCTGCAGCTGCCGCCAGCCTG...GAGAACGATGGGAGAACGCAAGTAAAGACGAAATGGGATTAAAACAAACAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | GGGAGCTGTTTGAAGGGGATAATGACATTAAACACACTGACCTTGGCTGAACTGGAGAGTCCAAGGCTGTaGGGTACAGGAGGCGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GSCLKGIMTLNTLTLAELESPRL*GTGGAQ Trigger: CTGTGCGCCTCCTGTACCCCACAGCCTTGGACTCTC...CAGTTCAGCCAAGGTCAGTGTGTTTAATGTCATTATCCCCTTCAAACAGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | GGGAGCTGTTTGAAGGGGATAATGACATTAAACACACTGACCTTGGCTGAACTGCCGCTTAGACTTGCCTaGCTTGTCCAGCGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSCLKGIMTLNTLTLAELPLRLA*LVQRQL Trigger: AAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGG...CAGTTCAGCCAAGGTCAGTGTGTTTAATGTCATTATCCCCTTCAAACAGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | TTGAGAAATTGGGAAAACACTAAGAAAACACTCAACTCAATGACCACATACCTCTCCGGCTCTGCAGGCTaGCGGCAGCTGCAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LRNWENTKKTLNSMTTYLSGSAG*RQLQPG Trigger: CCCAGGCTGCAGCTGCCGCCAGCCTGCAGAGCCGGA...GAGGTATGTGGTCATTGAGTTGAGTGTTTTCTTAGTGTTTTCCCAATTTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | AAAGCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTCGGCAACGCACAATCTaGGAAGAAGGGGGTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KAVLLLTLDHPTQILSLGRQRTI*EEGGER Trigger: TCTTTCACCCCCTTCTTCCCAGATTGTGCGTTGCCG...ACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | GGGAGCTGTTTGAAGGGGATAATGACATTAAACACACTGACCTTGGCTGAACTGTGCAAGTACTTGCGGTaGTTCACTTTCCGCTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: GSCLKGIMTLNTLTLAELCKYLR*FTFRLD Trigger: GTCTAAGCGGAAAGTGAACCACCGCAAGTACTTGCA...CAGTTCAGCCAAGGTCAGTGTGTTTAATGTCATTATCCCCTTCAAACAGCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CCA 90 bp | TTGAGAAATTGGGAAAACACTAAGAAAACACTCAACTCAATGACCACATACCTCCCACAGGAGGCTTCTTaGTCTGAGGACAGCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRNWENTKKTLNSMTTYLPQEAS*SEDSSG Trigger: CCCCGAGCTGTCCTCAGACCAAGAAGCCTCCTGTGG...GAGGTATGTGGTCATTGAGTTGAGTGTTTTCTTAGTGTTTTCCCAATTTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 90 bp | GCAGCGGGACCTTCCTGGTGCCGGGAGCCACTGAGCTCACCGCGGTaGCCGCCCCGTCTCCCACAGCGCTTGCTGCTCCGAGGCCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: AAGPSWCREPLSSPR*PPRLPQRLLLRGPG Trigger: TCCCGGGCCTCGGAGCAGCAAGCGCTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAGTGGCTCCCGGCACCAGGAAGGTCCCGCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | TCAACGGCCTCCGCCCCTTTCTCCAGGTCACCCAGACTCACGCCCTaGCCCGATGGGACGCCGCTGGCGCCGCCGCAGCCCACCCGGGAT | + |
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Preference number: 5 (lower is better) Translates to: STASAPFSRSPRLTP*PDGTPLAPPQPTRD Trigger: ATCCCGGGTGGGCTGCGGCGGCGCCAGCGGCGTCCCATCGGGCCAGGGCGTGAGTCTGGGTGACCTGGAGAAAGGGGCGGAGGCCGTTGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 90 bp | CAGGTTTCGGGCACGCAGCGGGACCTTCCTGGTGCCGGGAGCCACTaGGCTCACCGCGGTGCCCGCCCCGTCTCCCACAGCGCTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QVSGTQRDLPGAGSH*AHRGARPVSHSACC Trigger: GCAGCAAGCGCTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAGTGGCTCCCGGCACCAGGAAGGTCCCGCTGCGTGCCCGAAACCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | CTCCGCCCCTTTCTCCAGGTCACCCAGACTCACGCCCTGGCCCGATaGGACGCCGCTGGCGCCGCCGCAGCCCACCCGGGATGGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LRPFLQVTQTHALAR*DAAGAAAAHPGWFS Trigger: ACTGAACCATCCCGGGTGGGCTGCGGCGGCGCCAGCGGCGTCCCATCGGGCCAGGGCGTGAGTCTGGGTGACCTGGAGAAAGGGGCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 90 bp | ATGGGACGCCGCTGGCGCCGCCGCAGCCCACCCGGGATGGTTCAGTaGAGAAGGACGGGGGCAGGTTTCGGGCACGCAGCGGGACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: MGRRWRRRSPPGMVQ*RRTGAGFGHAAGPS Trigger: GGAAGGTCCCGCTGCGTGCCCGAAACCTGCCCCCGTCCTTCTTCACTGAACCATCCCGGGTGGGCTGCGGCGGCGCCAGCGGCGTCCCAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | AAGACAAGGCTGGCGCGTCCTCCCCACCTGGAGAGTCCAAGGCTGTaGGGTACAGGAGGCGCACAGGCTCGTTCAAGGTCACGCCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KTRLARPPHLESPRL*GTGGAQARSRSRRR Trigger: GCGGCGGCGTGACCTTGAACGAGCCTGTGCGCCTCCTGTACCCCACAGCCTTGGACTCTCCAGGTGGGGAGGACGCGCCAGCCTTGTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 90 bp | AAGGTCACGCCGCCGCGAACGCCAGCCACAGGAGGCTTCTTGGTCTaGGGACAGCTCGGGGTGTTCCAGGGCTCGGGGTATAGTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: KVTPPRTPATGGFLV*GQLGVFQGSGYSRF Trigger: GAACCTACTATACCCCGAGCCCTGGAACACCCCGAGCTGTCCTCAGACCAAGAAGCCTCCTGTGGCTGGCGTTCGCGGCGGCGTGACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | CGTTCAAGGTCACGCCGCCGCGAACGCCAGCCACAGGAGGCTTCTTaGTCTGAGGACAGCTCGGGGTGTTCCAGGGCTCGGGGTATAGTA | + |
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Preference number: 5 (lower is better) Translates to: RSRSRRRERQPQEAS*SEDSSGCSRARGIV Trigger: TACTATACCCCGAGCCCTGGAACACCCCGAGCTGTCCTCAGACCAAGAAGCCTCCTGTGGCTGGCGTTCGCGGCGGCGTGACCTTGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 90 bp | GATCGAGAGGGTCCGCGGCCATCAAGACACCCGAATCGTTGCCACTaGCGAAGTCTGGCGCCAGCAACTCAAAGAACTCAACGGCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: DREGPRPSRHPNRCH*RSLAPATQRTQRPP Trigger: CGGAGGCCGTTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATGGCCGCGGACCCTCTCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | GTCCGCGGCCATCAAGACACCCGAATCGTTGCCACTGCCGAAGTCTaGCGCCAGCAACTCAAAGAACTCAACGGCCTCCGCCCCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VRGHQDTRIVATAEV*RQQLKELNGLRPFL Trigger: GAGAAAGGGGCGGAGGCCGTTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATGGCCGCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 90 bp | GGAACGGATCGAGAGGGTCCGCGGCCATCAAGACACCCGAATCGTTaGCACTGCCGAAGTCTGGCGCCAGCAACTCAAAGAACTCAACGG | + |
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Preference number: 5 (lower is better) Translates to: GTDREGPRPSRHPNR*HCRSLAPATQRTQR Trigger: CCGTTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATGGCCGCGGACCCTCTCGATCCGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | CATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCGCTCCCGGAGGCCGTTaGGCTGGAGCATCTGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: HRSLLSEETQSGTQPTVVAPGGR*AGASAA Trigger: CGCTGCAGATGCTCCAGCCAAACGGCCTCCGGGAGC...GACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | CATCGTTCTCTCCTCTCAGAAGAAACCCAAAGTGGCACGCAGCCCACAGTAGTCAGCGCCAGCTTGATGTaGCTGGACGCCGAGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: HRSLLSEETQSGTQPTVVSASLM*LDAESM Trigger: CATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCT...GACTACTGTGGGCTGCGTGCCACTTTGGGTTTCTTCTGAGAGGAGAGAACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 90 bp | CTTCTGCAAGTACTTGCGGTGGTTCACTTTCCGCTTAGACTTGCCTaGCTTGTCCAGCGCCAGCTTGATGTTGCTGGACGCCGAGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLQVLAVVHFPLRLA*LVQRQLDVAGRRVY Trigger: ATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAAAGTGAACCACCGCAAGTACTTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | AAAGCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTTTGTCCAGCGCCAGCTaGATGTTGCTGGACGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: KAVLLLTLDHPTQILSLGLSSAS*MLLDAE Trigger: CTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAA...ACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | AAAGCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTACTTTCCGCTTAGACTaGCCTGGCTTGTCCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: KAVLLLTLDHPTQILSLGTFRLD*PGLSSA Trigger: GGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAAAGT...ACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | AAAGCTGTCTTACTCTTGACCCTTGATCATCCCACCCAAATCCTGTCTCTGGGTTCGAAACAGCAGCCTTaGTCCAGACTTCCGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: KAVLLLTLDHPTQILSLGSKQQP*SRLPKA Trigger: CGCCTTCGGAAGTCTGGACAAAGGCTGCTGTTTCGA...ACCCAGAGACAGGATTTGGGTGGGATGATCAAGGGTCAAGAGTAAGACAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTGTTTTAATCCCATTTCGTCTTTACTTGCGTTCTCCCATCGTTCTCTGCTTCTGCAAGTACTaGCGGTGGTTCACTTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: CLFVLIPFRLYLRSPIVLCFCKY*RWFTFR Trigger: GCGGAAAGTGAACCACCGCAAGTACTTGCAGAAGCA...GAGAACGATGGGAGAACGCAAGTAAAGACGAAATGGGATTAAAACAAACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 72 bp | GGCACGCAGCGGGACCTTCCTGGTGCCGGGAGCCACTaGGCTCACCGCGGTGCCCGCCCCGTCTCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GTQRDLPGAGSH*AHRGARPVSHS Trigger: GCTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAGTGGCTCCCGGCACCAGGAAGGTCCCGCTGCGTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | GGTCGCGACGGTCGGGGCTCCCGGAGGCCGTTTGGCTaGAGCATCTGCAGCGCTCGGGGACGCGGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GRDGRGSRRPFG*SICSARGRGSR Trigger: CCGAGACCCGCGTCCCCGAGCGCTGCAGATGCTCCAGCCAAACGGCCTCCGGGAGCCCCGACCGTCGCGACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | TCCGCCCCTTTCTCCAGGTCACCCAGACTCACGCCCTaGCCCGATGGGACGCCGCTGGCGCCGCCGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SAPFSRSPRLTP*PDGTPLAPPQP Trigger: GGGCTGCGGCGGCGCCAGCGGCGTCCCATCGGGCCAGGGCGTGAGTCTGGGTGACCTGGAGAAAGGGGCGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 90 bp | GAGCCACTGAGCTCACCGCGGTGCCCGCCCCGTCTCCCACAGCGCTaGCTGCTCCGAGGCCCGGGACTGACACCGCCTCCGCACCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EPLSSPRCPPRLPQR*LLRGPGLTPPPHRQ Trigger: CTGGCGGTGCGGAGGCGGTGTCAGTCCCGGGCCTCGGAGCAGCAAGCGCTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAGTGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | ACGGGGGCAGGTTTCGGGCACGCAGCGGGACCTTCCTaGTGCCGGGAGCCACTGAGCTCACCGCGGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TGAGFGHAAGPS*CREPLSSPRCP Trigger: CGGGCACCGCGGTGAGCTCAGTGGCTCCCGGCACCAGGAAGGTCCCGCTGCGTGCCCGAAACCTGCCCCCGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | TTTCTCCAGGTCACCCAGACTCACGCCCTGGCCCGATaGGACGCCGCTGGCGCCGCCGCAGCCCACCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLQVTQTHALAR*DAAGAAAAHPG Trigger: TCCCGGGTGGGCTGCGGCGGCGCCAGCGGCGTCCCATCGGGCCAGGGCGTGAGTCTGGGTGACCTGGAGAAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 72 bp | GTCTCCCACAGCGCTTGCTGCTCCGAGGCCCGGGACTaGCACCGCCTCCGCACCGCCAGCCGTCTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: VSHSACCSEARD*HRLRTASRLCT Trigger: GGTGCAGAGACGGCTGGCGGTGCGGAGGCGGTGTCAGTCCCGGGCCTCGGAGCAGCAAGCGCTGTGGGAGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 72 bp | CGCTGGCGCCGCCGCAGCCCACCCGGGATGGTTCAGTaGAGAAGGACGGGGGCAGGTTTCGGGCACGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RWRRRSPPGMVQ*RRTGAGFGHAA Trigger: CGCTGCGTGCCCGAAACCTGCCCCCGTCCTTCTTCACTGAACCATCCCGGGTGGGCTGCGGCGGCGCCAGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 72 bp | CCTTCCTGGTGCCGGGAGCCACTGAGCTCACCGCGGTaGCCGCCCCGTCTCCCACAGCGCTTGCTGCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: PSWCREPLSSPR*PPRLPQRLLLR Trigger: TCGGAGCAGCAAGCGCTGTGGGAGACGGGGCGGGCACCGCGGTGAGCTCAGTGGCTCCCGGCACCAGGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 90 bp | GCTCCCGCGGTCGCCCCGCTCTCATCGTCTTCGAAACAGCAGCCTTaGTCCAGACTTCCGAAGGCGCTCACCAGCCCGTCCGCGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: APAVAPLSSSSKQQP*SRLPKALTSPSAEP Trigger: AGGCTCCGCGGACGGGCTGGTGAGCGCCTTCGGAAGTCTGGACAAAGGCTGCTGTTTCGAAGACGATGAGAGCGGGGCGACCGCGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS TCA 72 bp | CCGCCGCGAACGCCAGCCACAGGAGGCTTCTTGGTCTaGGGACAGCTCGGGGTGTTCCAGGGCTCGGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: PPRTPATGGFLV*GQLGVFQGSGY Trigger: ATACCCCGAGCCCTGGAACACCCCGAGCTGTCCTCAGACCAAGAAGCCTCCTGTGGCTGGCGTTCGCGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 72 bp | AGCATCTGCAGCGCTCGGGGACGCGGGTCTCGGAGGTaGAGTCCCCATGAGGCCACTGCAGCGCTTAATCTG | + |
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Preference number: 6 (lower is better) Translates to: SICSARGRGSRR*SPHEATAALNL Trigger: CAGATTAAGCGCTGCAGTGGCCTCATGGGGACTGCACCTCCGAGACCCGCGTCCCCGAGCGCTGCAGATGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | CTGGCGCGTCCTCCCCACCTGGAGAGTCCAAGGCTGTaGGGTACAGGAGGCGCACAGGCTCGTTCAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LARPPHLESPRL*GTGGAQARSRS Trigger: TGACCTTGAACGAGCCTGTGCGCCTCCTGTACCCCACAGCCTTGGACTCTCCAGGTGGGGAGGACGCGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | GGTGAAAGAAGACAAGGCTGGCGCGTCCTCCCCACCTaGAGAGTCCAAGGCTGTGGGGTACAGGAGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: GERRQGWRVLPT*RVQGCGVQEAH Trigger: GTGCGCCTCCTGTACCCCACAGCCTTGGACTCTCCAGGTGGGGAGGACGCGCCAGCCTTGTCTTCTTTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 72 bp | GTCGCCCCGCTCTCATCGTCTTCGAAACAGCAGCCTTaGTCCAGACTTCCGAAGGCGCTCACCAGCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: VAPLSSSSKQQP*SRLPKALTSPS Trigger: GGACGGGCTGGTGAGCGCCTTCGGAAGTCTGGACAAAGGCTGCTGTTTCGAAGACGATGAGAGCGGGGCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 90 bp | ACTTTCCGCTTAGACTTGCCTGGCTTGTCCAGCGCCAGCTTGATGTaGCTGGACGCCGAGTCTATGAAGCTGAGCAGGTCGCGGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TFRLDLPGLSSASLM*LDAESMKLSRSRVA Trigger: GGCCACCCGCGACCTGCTCAGCTTCATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 90 bp | GGGAACGGATCGAGAGGGTCCGCGGCCATCAAGACACCCGAATCGTaGCCACTGCCGAAGTCTGGCGCCAGCAACTCAAAGAACTCAACG | + |
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Preference number: 6 (lower is better) Translates to: GNGSRGSAAIKTPES*PLPKSGASNSKNST Trigger: CGTTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATGGCCGCGGACCCTCTCGATCCGTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 90 bp | TGGTTCACTTTCCGCTTAGACTTGCCTGGCTTGTCCAGCGCCAGCTaGATGTTGCTGGACGCCGAGTCTATGAAGCTGAGCAGGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: WFTFRLDLPGLSSAS*MLLDAESMKLSRSR Trigger: CCGCGACCTGCTCAGCTTCATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAAAGTGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS GCA 72 bp | GGTCCGCGGCCATCAAGACACCCGAATCGTTGCCACTaGCGAAGTCTGGCGCCAGCAACTCAAAGAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: GPRPSRHPNRCH*RSLAPATQRTQ Trigger: TTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATGGCCGCGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | CATCAAGACACCCGAATCGTTGCCACTGCCGAAGTCTaGCGCCAGCAACTCAAAGAACTCAACGGCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: HQDTRIVATAEV*RQQLKELNGLR Trigger: GCGGAGGCCGTTGAGTTCTTTGAGTTGCTGGCGCCAGACTTCGGCAGTGGCAACGATTCGGGTGTCTTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CCA 72 bp | ACAATCTGGGAAGAAGGGGGTGAAAGAAGACAAGGCTaGCGCGTCCTCCCCACCTGGAGAGTCCAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TIWEEGGERRQG*RVLPTWRVQGC Trigger: ACAGCCTTGGACTCTCCAGGTGGGGAGGACGCGCCAGCCTTGTCTTCTTTCACCCCCTTCTTCCCAGATTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 72 bp | TTAGACTTGCCTGGCTTGTCCAGCGCCAGCTTGATGTaGCTGGACGCCGAGTCTATGAAGCTGAGCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LDLPGLSSASLM*LDAESMKLSRS Trigger: CGACCTGCTCAGCTTCATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 72 bp | TTCCGCTTAGACTTGCCTGGCTTGTCCAGCGCCAGCTaGATGTTGCTGGACGCCGAGTCTATGAAGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FRLDLPGLSSAS*MLLDAESMKLS Trigger: GCTCAGCTTCATAGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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| CDS CAA 72 bp | TGCAAGTACTTGCGGTGGTTCACTTTCCGCTTAGACTaGCCTGGCTTGTCCAGCGCCAGCTTGATGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CKYLRWFTFRLD*PGLSSASLMLL Trigger: CAGCAACATCAAGCTGGCGCTGGACAAGCCAGGCAAGTCTAAGCGGAAAGTGAACCACCGCAAGTACTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051179.12 |
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