Pregenerated sensors for FAM181A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096753Ensembl transcript IDs: ENSMUST00000179363.2, ENSMUST00000189885.2, ENSMUST00000191218.7
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTaGAAGCTCCCTCCGCATAGGTACCTGTCTGAGGAGCCTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LGFHFPCFPVPWSTS*KLPPHRYLSEEPCP Trigger: GGGACAAGGCTCCTCAGACAGGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR CCA 90 bp | GCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTaGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCTGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AAATLGFHFPCFPVP*STSCKLPPHRYLSE Trigger: CTCAGACAGGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR TCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCGAGGAGCCTTGTCCCTaGGGCAGCCTGGCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RVFLCLGPQAASSLRIGTEEPCP*GSLARP Trigger: GGGCCTGGCCAGGCTGCCTCAGGGACAAGGCTCCTC...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCAGTCCCTGAGGCAGCCTaGCCAGGCCCCTGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSVPEAA*PGPCPA Trigger: AGCTGGGCAGGGGCCTGGCCAGGCTGCCTCAGGGAC...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGAGGAGCCTTGTCCCTaGGGCAGCCTGGCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCEEPCP*GSLARP Trigger: GGGCCTGGCCAGGCTGCCTCAGGGACAAGGCTCCTC...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGTCCCTGAGGCAGCCTaGCCAGGCCCCTGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCVPEAA*PGPCPA Trigger: AGCTGGGCAGGGGCCTGGCCAGGCTGCCTCAGGGAC...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACACGGAGAGCTTGTCAGTaGCTGACCCCCATCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AAATLGFHFPCFPVPWSTRRACQ*LTPILE Trigger: CTCCAGGATGGGGGTCAGTCACTGACAAGCTCTCCG...TGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCGGAGAGCTTGTCAGTaGCTGACCCCCATCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FHFPCFPVPWSTSCKLPPRRACQ*LTPILE Trigger: CTCCAGGATGGGGGTCAGTCACTGACAAGCTCTCCG...CGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR TCA 72 bp | CTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTaGCTGACCCCCATCCTGGAGGCCAAAAGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LPSSLLTRRACQ*LTPILEAKRER Trigger: CCTCTCTCTTTTGGCCTCCAGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR GCA 72 bp | CACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTaGAAGCTCCCTCCGCATAGGTACCTGTCTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: HFPCFPVPWSTS*KLPPHRYLSEE Trigger: CTCCTCAGACAGGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| 3UTR CCA 72 bp | ACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTaGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: TLGFHFPCFPVP*STSCKLPPHRY Trigger: GTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTGCCCAGACTGGGTACTaGGCCCTGAGGCAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPAQTGY*ALRQDP Trigger: GGGGTCCTGCCTCAGGGCCCAGTACCCAGTCTGGGC...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTCCAGGGCCTTTTCTGTaGAGCTCCCACCCCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPPGPFL*SSHPHR Trigger: CCGGTGGGGGTGGGAGCTGCACAGAAAAGGCCCTGG...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTGATTGGGGACAGGGATaGAGGGGTGGCCGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPDWGQG*RGGRPG Trigger: GCCTGGACGGCCACCCCTCCATCCCTGTCCCCAATC...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTTCTTCAGGTCCCCTCTaGAGGTGGGGCTCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPSSGPL*RWGSAT Trigger: GGTGGCAGAGCCCCACCTGCAGAGGGGACCTGAAGA...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTGGGTCTAGCAGCCTCTaGATTCAGCCCCCGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPGSSSL*IQPPEA Trigger: GGCTTCCGGGGGCTGAATCCAGAGGCTGCTAGACCC...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATACTGGGTACTGGGCCCTaGGGCAGGACCCCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRILGTGP*GRTPGR Trigger: TCTCCCAGGGGTCCTGCCTCAGGGCCCAGTACCCAG...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | TGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCCTGGGTACTGGGCCCTaGGGCAGGACCCCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CVMGSCHTRVSLPVFSCALGTGP*GRTPGR Trigger: TCTCCCAGGGGTCCTGCCTCAGGGCCCAGTACCCAG...GGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | TGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCTGCAGGTGGGGCTCTaGCACCCTGCCAGGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CHTRVSLPVFSCALVHKLLQVGL*HPARQA Trigger: GGCCTGCCTGGCAGGGTGGCAGAGCCCCACCTGCAG...CAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCTGGGGACATGGGCAGTaGAGCAGTCTCGGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVFLCLGPQAASSLRIGTWGHGQ*SSLGPQ Trigger: CTGGGGCCCGAGACTGCTCCACTGCCCATGTCCCCA...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCCAGGGCCTTTTCTGTaGAGCTCCCACCCCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: MGSCHTRVSLPVFSCALVPGPFL*SSHPHR Trigger: CCGGTGGGGGTGGGAGCTGCACAGAAAAGGCCCTGG...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCGATTGGGGACAGGGATaGAGGGGTGGCCGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: MGSCHTRVSLPVFSCALVDWGQG*RGGRPG Trigger: GCCTGGACGGCCACCCCTCCATCCCTGTCCCCAATC...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | GCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACACCACCGGGGCTGGATTaGGGACAGGGATGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AAATLGFHFPCFPVPWSTPPGLD*GQGWRG Trigger: ACCCCTCCATCCCTGTCCCCAATCCAGCCCCGGTGG...TGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCAGCTGAGAGTGGGCCTTaGCTCCTCCCAGAACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSAESGP*LLPERG Trigger: GCCTCGTTCTGGGAGGAGCCAAGGCCCACTCTCAGC...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCACAAAGATGCCTCCCTaGGGGCCAGGCCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RVFLCLGPQAASSLRIGTTKMPP*GPGPPP Trigger: TGGAGGTGGGCCTGGCCCCCAGGGAGGCATCTTTGT...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCAACAAAGATGCCTCCCTaGGGGCCAGGCCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSTKMPP*GPGPPP Trigger: TGGAGGTGGGCCTGGCCCCCAGGGAGGCATCTTTGT...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATATGGGGACATGGGCAGTaGAGCAGTCTCGGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRIWGHGQ*SSLGPQ Trigger: CTGGGGCCCGAGACTGCTCCACTGCCCATGTCCCCA...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATACTGAGGCAGGACCCCTaGGAGACCCGGGAAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRILRQDP*ETREDG Trigger: CCCATCTTCCCGGGTCTCCCAGGGGTCCTGCCTCAG...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGCCCCATTGGGTAGCTaGGAGTGGGCCTTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRIAPLGS*EWALAP Trigger: AGGAGCCAAGGCCCACTCTCAGCTACCCAATGGGGC...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCTGCAGGTACTTGCGATaGTCCACAGAGCGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RVFLCLGPQAASSLRIGTCRYLR*STERRQ Trigger: CTGCCGCCGCTCTGTGGACCATCGCAAGTACCTGCA...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGCTGAGAGTGGGCCTTaGCTCCTCCCAGAACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRIAESGP*LLPERG Trigger: GCCTCGTTCTGGGAGGAGCCAAGGCCCACTCTCAGC...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTCTGAGGCAGGACCCCTaGGAGACCCGGGAAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCLRQDP*ETREDG Trigger: CCCATCTTCCCGGGTCTCCCAGGGGTCCTGCCTCAG...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATATCCACAGGCCCAGACTaGGTACTGGGCCCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRISTGPD*VLGPEA Trigger: TGCCTCAGGGCCCAGTACCCAGTCTGGGCCTGTGGA...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | GCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACATCCACAGGCCCAGACTaGGTACTGGGCCCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AAATLGFHFPCFPVPWSTSTGPD*VLGPEA Trigger: TGCCTCAGGGCCCAGTACCCAGTCTGGGCCTGTGGA...TGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTTCTGAGAGAAGCGCTTaGGTTGCTTCTGCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPSERSA*VASAGT Trigger: AGTACCTGCAGAAGCAACTCAAGCGCTTCTCTCAGA...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCGCTTCTGCAGGTACTTaGGATGGTCCACAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RVFLCLGPQAASSLRIGTASAGT*DGPQSG Trigger: GCCGCTCTGTGGACCATCGCAAGTACCTGCAGAAGC...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | TGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGTCTTCAGGTCCCCTCTaGAGGTGGGGCTCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: CHTRVSLPVFSCALVHKLSSGPL*RWGSAT Trigger: GGTGGCAGAGCCCCACCTGCAGAGGGGACCTGAAGA...CAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | GCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACATGCAGGTACTTGCGATaGTCCACAGAGCGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AAATLGFHFPCFPVPWSTCRYLR*STERRQ Trigger: CTGCCGCCGCTCTGTGGACCATCGCAAGTACCTGCA...TGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCGGAGACCCGGGAAGATaGGCTGTCCATGGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: MGSCHTRVSLPVFSCALVGDPGR*AVHGTG Trigger: TCCAGTCCCATGGACAGCCCATCTTCCCGGGTCTCC...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCAAGCCGCGAGTACTTCTaGGAGAAGCGCTTGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSSREYF*EKRLSC Trigger: GCAACTCAAGCGCTTCTCTCAGAAGTACTCGCGGCT...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCAGCCGCGAGTACTTCTaGGAGAAGCGCTTGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RVFLCLGPQAASSLRIGTSREYF*EKRLSC Trigger: GCAACTCAAGCGCTTCTCTCAGAAGTACTCGCGGCT...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTCACCTCCAGCCCCATTaGGTAGCTGAGAGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCHLQPH*VAESGP Trigger: AGGCCCACTCTCAGCTACCCAATGGGGCTGGAGGTG...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | TGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCACCTCCAGCCCCATTaGGTAGCTGAGAGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CHTRVSLPVFSCALVHKLHLQPH*VAESGP Trigger: AGGCCCACTCTCAGCTACCCAATGGGGCTGGAGGTG...CAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGGAGACCCGGGAAGATaGGCTGTCCATGGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCGDPGR*AVHGTG Trigger: TCCAGTCCCATGGACAGCCCATCTTCCCGGGTCTCC...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAACACCCTTGCAGAAGTaGGCCAGATCCACAGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TSRVFLCLGPQAASSLRITPLQK*ARSTGE Trigger: CTCGCCTGTGGATCTGGCCCACTTCTGCAAGGGTGT...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCTTCTGCAGGTACTTaGGATGGTCCACAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCASAGT*DGPQSG Trigger: GCCGCTCTGTGGACCATCGCAAGTACCTGCAGAAGC...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTACACCCTTGCAGAAGTaGGCCAGATCCACAGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCTPLQK*ARSTGE Trigger: CTCGCCTGTGGATCTGGCCCACTTCTGCAAGGGTGT...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCATCTGAGAGAAGCGCTTaGGTTGCTTCTGCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSSERSA*VASAGT Trigger: AGTACCTGCAGAAGCAACTCAAGCGCTTCTCTCAGA...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCCAGCTCCCTCCTCACACGGAGAGCTTGTCAGTGACTGACCCCCATCCTGGGACTCCAGACCCTTaGAGTTTTTCTTATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PAQLPPHTESLSVTDPHPGTPDP*SFSYSH Trigger: ATGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCC...AGGATGGGGGTCAGTCACTGACAAGCTCTCCGTGTGAGGAGGGAGCTGGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR TCA 90 bp | TGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCATACCCCAGACATCTTaGGTGGTTCCGTGTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: CVMGSCHTRVSLPVFSCAIPQTS*VVPCQL Trigger: TAGCTGACACGGAACCACTCAAGATGTCTGGGGTAT...GGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR GCA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGGGACTCCAGACCCTTaGAGTTTTTCTTATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCGTPDP*SFSYSH Trigger: ATGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCC...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CCA 90 bp | GGCCAGGCCCACCTCCAGCCCCATTGGGTAGCTGAGAGTGGGCCTTaGCTCCTCCCAGAACGAGGCGGGCAGCTGTCTCTTCCTCATGGG | + |
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Preference number: 5 (lower is better) Translates to: GQAHLQPHWVAESGP*LLPERGGQLSLPHG Trigger: CCCATGAGGAAGAGACAGCTGCCCGCCTCGTTCTGGGAGGAGCCAAGGCCCACTCTCAGCTACCCAATGGGGCTGGAGGTGGGCCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCCCACCGGGGCTGGATaGGGGACAGGGATGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: MGSCHTRVSLPVFSCALVPTGAG*GTGMEG Trigger: CCCCTCCATCCCTGTCCCCAATCCAGCCCCGGTGGG...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCCCCACCGGGGCTGGATaGGGGACAGGGATGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: CVMGSCHTRVSLPVFSCAPTGAG*GTGMEG Trigger: CCCCTCCATCCCTGTCCCCAATCCAGCCCCGGTGGG...GGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | ACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATACGGCAGGGTGCGGACTaGTCCAGGGCCGCCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: TSRVFLCLGPQAASSLRIRQGAD*SRAALM Trigger: CATCAAGGCGGCCCTGGACAAGTCCGCACCCTGCCG...TATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | GGGGTATGGCAGCTGAACAGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCATTGTCCAGGGCCGCCTaGATGTCACTGGACGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVWQLNRCVMGSCHTRVSLSRAA*MSLDAR Trigger: CCTGGCGTCCAGTGACATCAAGGCGGCCCTGGACAA...TGAAACCCTAGTGTGGCAGCTGCCCATCACACACCTGTTCAGCTGCCATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | CGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATAGGTACCTTGTCCAGGGCCGCCTaGATGTCACTGGACGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RVFLCLGPQAASSLRIGTLSRAA*MSLDAR Trigger: CCTGGCGTCCAGTGACATCAAGGCGGCCCTGGACAA...GGTACCTATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CCA 90 bp | CAGCTGTCTCTTCCTCATGGGAACCTGGCCGGGTCTAGCAGCCTCTaGATTCAGCCCCCGGAAGCCCTGATCCTTAGAAAGGCATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QLSLPHGNLAGSSSL*IQPPEALILRKAFL Trigger: GAGGAATGCCTTTCTAAGGATCAGGGCTTCCGGGGGCTGAATCCAGAGGCTGCTAGACCCGGCCAGGTTCCCATGAGGAAGAGACAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | TTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGACGGGTCTGTACACTTaGGGCCCTGGGGTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: FHFPCFPVPWSTSCKLPPTGLYT*GPGVST Trigger: TGTGGACACCCCAGGGCCCAAAGTGTACAGACCCGT...CGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCACGGGTCTGTACACTTaGGGCCCTGGGGTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: CVMGSCHTRVSLPVFSCATGLYT*GPGVST Trigger: TGTGGACACCCCAGGGCCCAAAGTGTACAGACCCGT...GGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | CACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGCAAGCTCCCTCCGCATGATACCCCAGACATCTaGAGTGGTTCCGTGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HFPCFPVPWSTSCKLPPHDTPDI*SGSVSA Trigger: AGCTGACACGGAACCACTCAAGATGTCTGGGGTATC...ATGCGGAGGGAGCTTGCAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | TGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCCACAAGCTGGATACCCCAGACATCTaGAGTGGTTCCGTGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CHTRVSLPVFSCALVHKLDTPDI*SGSVSA Trigger: AGCTGACACGGAACCACTCAAGATGTCTGGGGTATC...CAGCTTGTGGACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCTCACTGGACGCCAGGTaGACAAAATTCAGAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: MGSCHTRVSLPVFSCALVSLDAR*TKFRSI Trigger: GATGCTTCTGAATTTTGTCAACCTGGCGTCCAGTGA...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | AGGTGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTTCACTGGACGCCAGGTaGACAAAATTCAGAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: RCVMGSCHTRVSLPVFSCSLDAR*TKFRSI Trigger: GATGCTTCTGAATTTTGTCAACCTGGCGTCCAGTGA...ACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCAGGGACTCCAGACCCTaGCAGTTTTTCTTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: CVMGSCHTRVSLPVFSCARDSRP*QFFLFS Trigger: TGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCCT...GGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCATCACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS-3UTR CAA 90 bp | ATGGGCAGCTGCCACACTAGGGTTTCACTTCCCGTGTTTTCCTGTGCCTTGGTCAGGGACTCCAGACCCTaGCAGTTTTTCTTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: MGSCHTRVSLPVFSCALVRDSRP*QFFLFS Trigger: TGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCCT...GACCAAGGCACAGGAAAACACGGGAAGTGAAACCCTAGTGTGGCAGCTGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS TCA 72 bp | CTTCTCCTCCACAGGCCCAGACTGGGTACTGGGCCCTaGGGCAGGACCCCTGGGAGACCCGGGAAGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLHRPRLGTGP*GRTPGRPGKMG Trigger: GCCCATCTTCCCGGGTCTCCCAGGGGTCCTGCCTCAGGGCCCAGTACCCAGTCTGGGCCTGTGGAGGAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CCA 72 bp | AACGAGGCGGGCAGCTGTCTCTTCCTCATGGGAACCTaGCCGGGTCTAGCAGCCTCTGGATTCAGCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: NEAGSCLFLMGT*PGLAASGFSPR Trigger: CCGGGGGCTGAATCCAGAGGCTGCTAGACCCGGCCAGGTTCCCATGAGGAAGAGACAGCTGCCCGCCTCGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS CCA 72 bp | CACCTCCAGCCCCATTGGGTAGCTGAGAGTGGGCCTTaGCTCCTCCCAGAACGAGGCGGGCAGCTGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HLQPHWVAESGP*LLPERGGQLSL Trigger: AAGAGACAGCTGCCCGCCTCGTTCTGGGAGGAGCCAAGGCCCACTCTCAGCTACCCAATGGGGCTGGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS CAA 72 bp | GAGCGGCGGCAGGGTGCGGACTTGTCCAGGGCCGCCTaGATGTCACTGGACGCCAGGTTGACAAAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ERRQGADLSRAA*MSLDARLTKFR Trigger: TCTGAATTTTGTCAACCTGGCGTCCAGTGACATCAAGGCGGCCCTGGACAAGTCCGCACCCTGCCGCCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS CAA 90 bp | GCTGGCTTAGTCGGGATAGGCTTCAGAACTACGGGTCTGTACACTTaGGGCCCTGGGGTGTCCACACCCTTGCAGAAGTGGGCCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: AGLVGIGFRTTGLYT*GPGVSTPLQKWARS Trigger: GGATCTGGCCCACTTCTGCAAGGGTGTGGACACCCCAGGGCCCAAAGTGTACAGACCCGTAGTTCTGAAGCCTATCCCGACTAAGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS TCA 72 bp | GGTCTAGCAGCCTCTGGATTCAGCCCCCGGAAGCCCTaGTCCTTAGAAAGGCATTCCTCCCTAAAGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GLAASGFSPRKP*SLERHSSLKGV Trigger: GACCCCCTTTAGGGAGGAATGCCTTTCTAAGGATCAGGGCTTCCGGGGGCTGAATCCAGAGGCTGCTAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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| CDS CAA 72 bp | GTCGGGATAGGCTTCAGAACTACGGGTCTGTACACTTaGGGCCCTGGGGTGTCCACACCCTTGCAGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VGIGFRTTGLYT*GPGVSTPLQKW Trigger: CCACTTCTGCAAGGGTGTGGACACCCCAGGGCCCAAAGTGTACAGACCCGTAGTTCTGAAGCCTATCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CAA 72 bp | GCATCCAGGCTGCCTACCAAGGATACCCCAGACATCTaGAGTGGTTCCGTGTCAGCTAGTACCCTTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ASRLPTKDTPDI*SGSVSASTLGD Trigger: GTCCCCAAGGGTACTAGCTGACACGGAACCACTCAAGATGTCTGGGGTATCCTTGGTAGGCAGCCTGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS TCA 72 bp | CATCCAGGCTGCCTACCAAGGATACCCCAGACATCTTaGGTGGTTCCGTGTCAGCTAGTACCCTTGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: HPGCLPRIPQTS*VVPCQLVPLGT Trigger: TGTCCCCAAGGGTACTAGCTGACACGGAACCACTCAAGATGTCTGGGGTATCCTTGGTAGGCAGCCTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS GCA 72 bp | GTGGAGCAGTCTCGGGCCCCAGGGACTCCAGACCCTTaGAGTTTTTCTTATTCTCATACAAAGATGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VEQSRAPGTPDP*SFSYSHTKMPP Trigger: GGGAGGCATCTTTGTATGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCCTGGGGCCCGAGACTGCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CCA 72 bp | GTAGCCAAAGACATTGAAGATAGGGGGAGGCATGGCTaGCTTAGTCGGGATAGGCTTCAGAACTACGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VAKDIEDRGRHG*LSRDRLQNYGS Trigger: AGACCCGTAGTTCTGAAGCCTATCCCGACTAAGCCAGCCATGCCTCCCCCTATCTTCAATGTCTTTGGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CAA 72 bp | AGTGGAGCAGTCTCGGGCCCCAGGGACTCCAGACCCTaGCAGTTTTTCTTATTCTCATACAAAGATGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGAVSGPRDSRP*QFFLFSYKDAS Trigger: GGAGGCATCTTTGTATGAGAATAAGAAAAACTGCAAGGGTCTGGAGTCCCTGGGGCCCGAGACTGCTCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179363.2 ENSMUST00000191218.7 |
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| CDS CAA 72 bp | TTGTCCAGGGCCGCCTTGATGTCACTGGACGCCAGGTaGACAAAATTCAGAAGCATCTTCACGTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSRAALMSLDAR*TKFRSIFTSLS Trigger: TGACAGTGACGTGAAGATGCTTCTGAATTTTGTCAACCTGGCGTCCAGTGACATCAAGGCGGCCCTGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179363.2 ENSMUST00000189885.2 ENSMUST00000191218.7 |
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