Pregenerated sensors for FAM178B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046337Ensembl transcript IDs: ENSMUST00000114981.3, ENSMUST00000170295.8, ENSMUST00000194025.2, ENSMUST00000194839.6
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGGGCCACTTTGCTCTTATCCCTTTAAATGTCTTTCCAAGGGCTaGAGTACTGACCCTGGGGCTGACAGTGGGCCAGCAAGTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LGPLCSYPFKCLSKG*STDPGADSGPASPA Trigger: GGCAGGACTTGCTGGCCCACTGTCAGCCCCAGGGTCAGTACTTCAGCCCTTGGAAAGACATTTAAAGGGATAAGAGCAAAGTGGCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| 3UTR CCA 90 bp | GCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTaGGAAAGTCAGTGGCCAACAGGGAGAGCCCAGAACAGAAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: AQMNLIFKMGREGKV*ESQWPTGRAQNRRD Trigger: GTCTCTTCTGTTCTGGGCTCTCCCTGTTGGCCACTGACTTTCCCACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCGTCCGGTGCATGGCCTaGGGGCTCTCCCGGATATGG | + |
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Preference number: 2 (lower is better) Translates to: LGLTVGQQVLPADVSLGSVRCMA*GLSRIW Trigger: CCATATCCGGGAGAGCCCTCAGGCCATGCACCGGAC...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGACACCTGTGCAGGTaGGGGAGCTCAAGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSRHLCR*GSSRVG Trigger: CCCCACCCTTGAGCTCCCCCACCTGCACAGGTGTCT...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTACTACCTTCACCAGGCTaGGCCTCCTCCGGCTCCATT | + |
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Preference number: 2 (lower is better) Translates to: SRVGMVRDTRTPRWVVAVLPSPG*ASSGSI Trigger: AATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAG...TACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCATGTCTTTCCAAGGGCTaGAGTACTGACCCTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSRVGMVRDTRTPRWVVACLSKG*STDPGA Trigger: AGCCCCAGGGTCAGTACTTCAGCCCTTGGAAAGACA...TGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCCCCGGATATGGGTGCTaGTATGACGGTCCAACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLTVGQQVLPADVSLGSPGYGC*YDGPTA Trigger: TGCAGTTGGACCGTCATATCAGCACCCATATCCGGG...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTCCAGTCCACAGCCTTaGGCCACTTTGCTCTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: AQGWGWSGTQEPLAGWWQSSPQP*ATLLLS Trigger: GGATAAGAGCAAAGTGGCCCAAGGCTGTGGACTGGA...CTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCGACGGTCCAACTGCATaGACAACAGCTGTAGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGLTVGQQVLPADVSLGSDGPTA*TTAVAH Trigger: GTGAGCTACAGCTGTTGTGCATGCAGTTGGACCGTC...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCAGTCTAGCTCGGCACTaGCCTTTGAGTGTTGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: LGLTVGQQVLPADVSLGSSLARH*PLSVAL Trigger: TAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACT...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGTCTACAGTTCTCTTCCTaGTCCAGTCCACAGCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KGGDGQGHKNPSLGGGSSLQFSS*SSPQPW Trigger: CCAAGGCTGTGGACTGGAGCAGGAAGAGAACTGTAG...ACTACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTATCCAGTCCACAGCCTTaGGCCACTTTGCTCTTATCC | + |
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Preference number: 2 (lower is better) Translates to: SSLPSPGWASSGSILHLLSSPQP*ATLLLS Trigger: GGATAAGAGCAAAGTGGCCCAAGGCTGTGGACTGGA...TAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTGCAGAAGAGACACCTGTaGAGGTGGGGGAGCTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LICTNEPHIQDGQRGQGVQKRHL*RWGSSR Trigger: CCTTGAGCTCCCCCACCTGCACAGGTGTCTCTTCTG...CACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR CCA 72 bp | AGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTaGGTGGTGGCAGTAGTCTACCTTCACCAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RVGMVRDTRTPR*VVAVVYLHQAG Trigger: CCCAGCCTGGTGAAGGTAGACTACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR CCA 72 bp | AGAAGAGACACCTGTGCAGGTGGGGGAGCTCAAGGGTaGGGATGGTCAGGGACACAAGAACCCCTCGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RRDTCAGGGAQG*GWSGTQEPLAG Trigger: CCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGCTCCCCCACCTGCACAGGTGTCTCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| 3UTR TCA 72 bp | CTTTGCTCTTATCCCTTTAAATGTCTTTCCAAGGGCTaGAGTACTGACCCTGGGGCTGACAGTGGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LCSYPFKCLSKG*STDPGADSGPA Trigger: TGCTGGCCCACTGTCAGCCCCAGGGTCAGTACTTCAGCCCTTGGAAAGACATTTAAAGGGATAAGAGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| CDS-3UTR TCA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTGTCCGGTGCATGGCCTaGGGGCTCTCCCGGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSVRCMA*GLSRIW Trigger: CCATATCCGGGAGAGCCCTCAGGCCATGCACCGGAC...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGTAGCACCCTTGCGCTGTaGTGGAAGGGCCCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KGGDGQGHKNPSLGGGSSSTLAL*WKGPCG Trigger: CCCACAGGGGCCCTTCCAGCACAGCGCAAGGGTGCT...ACTACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTGCCAGCAGGTTGTGGTaGTGGTCGGACACCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LGGGSSLPSPGWASSGSIASRLW*WSDTQL Trigger: GAGCTGGGTGTCCGACCACCACCACAACCTGCTGGC...AATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCACCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTGTTTGGTCCGGTGCATaGCCTGAGGGCTCTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LGGGSSLPSPGWASSGSIVWSGA*PEGSPG Trigger: TCCGGGAGAGCCCTCAGGCCATGCACCGGACCAAAC...AATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCACCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR GCA 90 bp | GCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGAGCAGGAGCAGGAGTTaGTGGAGGTCAGTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQGWGWSGTQEPLAGWWQSRSRS*WRSVLG Trigger: GCCCAAGACTGACCTCCAGCAACTCCTGCTCCTGCT...CTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | GCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGCCCAGAGGAAATCTCTaGGGTCCCAGCCTGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AQGWGWSGTQEPLAGWWQPRGNL*GPSLLA Trigger: AGCCAACAGGCTGGGACCCCAGAGATTTCCTCTGGG...CTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGTACCCTTGCGCTGTGCTaGAAGGGCCCCTGTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: KGGDGQGHKNPSLGGGSSTLALC*KGPCGY Trigger: GTACCCACAGGGGCCCTTCCAGCACAGCGCAAGGGT...ACTACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGCAGGTTGTGGTGGTaGTCGGACACCCAGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSSRLWW*SDTQLR Trigger: CCTGAGCTGGGTGTCCGACCACCACCACAACCTGCT...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR CCA 90 bp | GTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCAGGGCCAGCAGGTTGTaGTGGTGGTCGGACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: VVAVVYLHQAGPPPAPFFRASRL*WWSDTQ Trigger: CTGGGTGTCCGACCACCACCACAACCTGCTGGCCCT...GAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGGCTGAAGTACTGACCCTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAATGAGGCTGAGGAGCTaGCTGAGCAGGGCTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVLTLGLTVGQQVLPMRLRS*LSRASW Trigger: CCAGCTAGCCCTGCTCAGCCAGCTCCTCAGCCTCAT...TGGCAGGACTTGCTGGCCCACTGTCAGCCCCAGGGTCAGTACTTCAGCCCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| CDS-3UTR TCA 90 bp | GTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCGATGCACTGGCGAGATaGCCTGCAGGGACACGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VVAVVYLHQAGPPPAPFFDALAR*PAGTRR Trigger: TCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATC...GAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR TCA 90 bp | GTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCCTGGGGAGGATCCTGTaGATCCAGGCTGGCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: VVAVVYLHQAGPPPAPFFLGRIL*IQAGLT Trigger: AGTGAGGCCAGCCTGGATTCACAGGATCCTCCCCAG...GAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR GCA 90 bp | GCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AQGWGWSGTQEPLAGWWQTSRKN*TRASRL Trigger: CAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGT...CTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCCCTGTGAATCCAGGCTaGCCTCACTCTCAAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: LGLTVGQQVLPADVSLGSPVNPG*PHSQAP Trigger: GGGTGCTTGAGAGTGAGGCCAGCCTGGATTCACAGG...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| CDS-3UTR CCA 90 bp | CCAAGGGCTGAAGTACTGACCCTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGGAAGTGACTCCTGCTaGCCCAGCATCCGGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: PRAEVLTLGLTVGQQVLPGSDSC*PSIRAI Trigger: TATTGCCCGGATGCTGGGCCAGCAGGAGTCACTTCC...TGGCAGGACTTGCTGGCCCACTGTCAGCCCCAGGGTCAGTACTTCAGCCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGGCTGAAGTACTGACCCTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVLTLGLTVGQQVLPTSRKN*TRASRL Trigger: CAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGT...TGGCAGGACTTGCTGGCCCACTGTCAGCCCCAGGGTCAGTACTTCAGCCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCGCACAGCAAAGGGGCTaGAGCTTTCCAGGCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: VAVVYLHQAGPPPAPFFTAQQRG*SFPGHS Trigger: AGAGTGGCCTGGAAAGCTCCAGCCCCTTTGCTGTGC...GGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR TCA 90 bp | GTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCATCACAAGACTCAGCTaGCTTCTCAGCTGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VAVVYLHQAGPPPAPFFTITRLS*LLSCLP Trigger: GGGCAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGAT...GGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR TCA 90 bp | GTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCCCCGGATATGGGTGCTaGTATGACGGTCCAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: VVAVVYLHQAGPPPAPFFPGYGC*YDGPTA Trigger: TGCAGTTGGACCGTCATATCAGCACCCATATCCGGG...GAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR GCA 90 bp | GTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCACTGGCGAGATGACCTaGAGGGACACGGAGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: VAVVYLHQAGPPPAPFFTTGEMT*RDTENF Trigger: GAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGT...GGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR GCA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTGACGGTCCAACTGCATaGACAACAGCTGTAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSDGPTA*TTAVAH Trigger: GTGAGCTACAGCTGTTGTGCATGCAGTTGGACCGTC...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | GTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGTCCTGTGAATCCAGGCTaGCCTCACTCTCAAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: VYLHQAGPPPAPFFTSYSPVNPG*PHSQAP Trigger: GGGTGCTTGAGAGTGAGGCCAGCCTGGATTCACAGG...ACTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTAGTTCCAAGGCCACTTCCTaGGGAGGATCCTGTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: KGGDGQGHKNPSLGGGSSSKATS*GGSCES Trigger: GGATTCACAGGATCCTCCCCAGGAAGTGGCCTTGGA...ACTACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTGACAGTGGGCCAGCAAGTCCTGCCAGCGGATGTAAGTCTGGGTAGCTTTCCAGGCCACTCTTaGATTCTCTCCAGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLTVGQQVLPADVSLGSFPGHS*ILSSSR Trigger: CCTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAA...GCTACCCAGACTTACATCCGCTGGCAGGACTTGCTGGCCCACTGTCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCACTGAGCAGGGCTAGCTaGGTTTTCTCTGCCGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSRVGMVRDTRTPRWVVALSRAS*VFSAEK Trigger: TTTCTCGGCAGAGAAAACCCAGCTAGCCCTGCTCAG...TGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR TCA 90 bp | GGCACAGATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTGGGGAGGATCCTGTaGATCCAGGCTGGCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: GTDSRPCSLARHWPLSVALGRIL*IQAGLT Trigger: AGTGAGGCCAGCCTGGATTCACAGGATCCTCCCCAG...GGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATCTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| CDS-3UTR TCA 90 bp | AGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGATCACAAGACTCAGCTaGCTTCTCAGCTGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLPSPGWASSGSILHLLQITRLS*LLSCLP Trigger: GGGCAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGAT...CTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCATGTAGCTCACCCCATTaGTTGGGAGTAATGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSRVGMVRDTRTPRWVVACSSPH*LGVMSW Trigger: CCAGGACATTACTCCCAATCAATGGGGTGAGCTACA...TGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR TCA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTATATGGGTGCTGATATaGCGGTCCAACTGCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSIWVLI*RSNCMH Trigger: GTGCATGCAGTTGGACCGTCATATCAGCACCCATAT...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCTTTCCAGGCCACTCTTaGATTCTCTCCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVAVVYLHQAGPPPAPFFFPGHS*ILSSSR Trigger: CCTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAA...GAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTAGGAAGTGACTCCTGCTaGCCCAGCATCCGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSPGWASSGSILHLLGSDSC*PSIRAI Trigger: TATTGCCCGGATGCTGGGCCAGCAGGAGTCACTTCC...TAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGCTCTCCCGGATATGGGTGCTGATATGACGGTCCAACTGCATGCACAAATGAGGCTGAGGAGCTaGCTGAGCAGGGCTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRALPDMGADMTVQLHAQMRLRS*LSRASW Trigger: CCAGCTAGCCCTGCTCAGCCAGCTCCTCAGCCTCAT...TTGTGCATGCAGTTGGACCGTCATATCAGCACCCATATCCGGGAGAGCCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTACATGCAGGTAGAGGTTaGTCAGGAGGCCATTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRVGMVRDTRTPRWVVAVHAGRG*SGGHCV Trigger: TACACAATGGCCTCCTGAGCAACCTCTACCTGCATG...TACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGGGGTCCCTTTTTGGCTaGAGGTGCTTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSPGWASSGSILHLLQGSLFG*RCFLGL Trigger: AAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCC...CTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGTAGTCTAGCTCGGCACTaGCCTTTGAGTGTTGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VYLHQAGPPPAPFFTSYSSLARH*PLSVAL Trigger: TAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACT...ACTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGTTCTCTTCCTGAGGCCAAAAGCTCTTaGAGATGTTTCTGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQAGPPPAPFFTSYSSLPEAKSS*RCFWRP Trigger: TGGCCTCCAGAAACATCTTCAAGAGCTTTTGGCCTC...AGGAAGAGAACTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR GCA 90 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACAGCAGGAGCAGGAGTTaGTGGAGGTCAGTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSRPCSLARHWPLSVALDSRSRS*WRSVLG Trigger: GCCCAAGACTGACCTCCAGCAACTCCTGCTCCTGCT...GTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACGGCCATGTTAACAACTaGAACAGCCACTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVYLHQAGPPPAPFFTSYGHVNN*NSHCSR Trigger: TCTGCTGCAGTGGCTGTTCCAGTTGTTAACATGGCC...GTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACTGGATGGGAAGTGACTCCTGCTaGCCCAGCATCCGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RPCSLARHWPLSVALDWMGSDSC*PSIRAI Trigger: TATTGCCCGGATGCTGGGCCAGCAGGAGTCACTTCC...CATCCAGTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR TCA 90 bp | AGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTATTTGACCTCCTGCAGTaGGGGACACCAGAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSPGWASSGSILHLLFDLLQ*GTPEMH Trigger: ATGCATTTCTGGTGTCCCTCACTGCAGGAGGTCAAA...TAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAGCACCCTTGCGCTGTaGTGGAAGGGCCCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWSTLAL*WKGPCG Trigger: CCCACAGGGGCCCTTCCAGCACAGCGCAAGGGTGCT...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACTGGATGTCCAAGGCCACTTCCTaGGGAGGATCCTGTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPCSLARHWPLSVALDWMSKATS*GGSCES Trigger: GGATTCACAGGATCCTCCCCAGGAAGTGGCCTTGGA...CATCCAGTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR TCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGCCCGTGGGATGTGGTTaGGAAGCACCCACCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKPVGCG*EAPTCP Trigger: GGGGCAGGTGGGTGCTTCTCAACCACATCCCACGGG...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGACCCTTGCGCTGTGCTaGAAGGGCCCCTGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWTLALC*KGPCGY Trigger: GTACCCACAGGGGCCCTTCCAGCACAGCGCAAGGGT...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTGGGAAAGGGCCAGCAGGTTGTaGTGGTGGTCGGACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAQMNLIFKMGREGKVWERASRL*WWSDTQ Trigger: CTGGGTGTCCGACCACCACCACAACCTGCTGGCCCT...TTCCCACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR CCA 90 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACCTGAGCAGGGCTAGCTaGGTTTTCTCTGCCGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSRPCSLARHWPLSVALDLSRAS*VFSAEK Trigger: TTTCTCGGCAGAGAAAACCCAGCTAGCCCTGCTCAG...GTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGATGCACTGGCGAGATaGCCTGCAGGGACACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWDALAR*PAGTRR Trigger: TCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR TCA 90 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACATCACAAGACTCAGCTaGCTTCTCAGCTGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSRPCSLARHWPLSVALDITRLS*LLSCLS Trigger: GGAAAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGAT...GTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGCCAGCTCCACCTTCTaGTTGGGATCTGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWASSTF*LGSGGS Trigger: GGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGGCCAGCAGGTTGTGGTaGTGGTCGGACACCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKASRLW*WSDTQL Trigger: GAGCTGGGTGTCCGACCACCACCACAACCTGCTGGC...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGAGGGCCAGCAGGTTGTaGTGGTGGTCGGACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKRASRL*WWSDTQ Trigger: CTGGGTGTCCGACCACCACCACAACCTGCTGGCCCT...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGCTGGGGAGGATCCTGTaGATCCAGGCTGGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKLGRIL*IQAGLT Trigger: AGTGAGGCCAGCCTGGATTCACAGGATCCTCCCCAG...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGTGTAGGAAGGAGAGCTaGTCGGGCAGCGAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKCRKES*SGSEDL Trigger: CAGGTCCTCGCTGCCCGAGCAGCTCTCCTTCCTACA...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGCACAGCAAAGGGGCTaGAGCTTTCCAGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWAQQRG*SFPGHS Trigger: AGAGTGGCCTGGAAAGCTCCAGCCCCTTTGCTGTGC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGAGCAGGTTGTGGTGGTaGTCGGACACCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKSRLWW*SDTQLR Trigger: CCTGAGCTGGGTGTCCGACCACCACCACAACCTGCT...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGACTGGCGAGATGACCTaGAGGGACACGGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWTGEMT*RDTENF Trigger: GAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGT...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGCTCCACCTTCTGGTTaGGATCTGGAGGGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWAPPSG*DLEGPS Trigger: AGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGTCTTCCAATGGGCTGTaGGGCTTTAGACGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWSSNGL*GFRREE Trigger: CTCCTCTCGTCTAAAGCCGCACAGCCCATTGGAAGA...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTGGGAATCTTCCAATGGGCTGTaGGGCTTTAGACGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YAQMNLIFKMGREGKVWESSNGL*GFRREE Trigger: CTCCTCTCGTCTAAAGCCGCACAGCCCATTGGAAGA...TTCCCACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKTSRKN*TRASRL Trigger: CAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGT...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGGGTCCCTTTTTGGCTaGAGGTGCTTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWGSLFG*RCFLGL Trigger: AAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTAGCAGGTTGTGGTGGTaGTCGGACACCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLICTNEPHIQDGQRGQGSRLWW*SDTQLR Trigger: CCTGAGCTGGGTGTCCGACCACCACCACAACCTGCT...ACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| 3UTR CAA 72 bp | CCTCCTACAGTTCTCTTCCTGCTCCAGTCCACAGCCTaGGGCCACTTTGCTCTTATCCCTTTAAATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTVLFLLQSTA*GHFALIPLNVF Trigger: AAAGACATTTAAAGGGATAAGAGCAAAGTGGCCCAAGGCTGTGGACTGGAGCAGGAAGAGAACTGTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGCACTGCAGCAGAGGCTaGGGGCAGTCAGCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLHCSRG*GQSAAC Trigger: GCATGCTGCTGACTGCCCTCAGCCTCTGCTGCAGTG...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGGAGGCCAAAAGCTCTTaGAGATGTTTCTGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWEAKSS*RCFWRP Trigger: TGGCCTCCAGAAACATCTTCAAGAGCTTTTGGCCTC...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGCATGCAGGTAGAGGTTaGTCAGGAGGCCATTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSETLETRQTVCLLGLVWHAGRG*SGGHCV Trigger: TACACAATGGCCTCCTGAGCAACCTCTACCTGCATG...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGCCAGCAGGTTGTGGTaGTGGTCGGACACCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQASRLW*WSDTQL Trigger: GAGCTGGGTGTCCGACCACCACCACAACCTGCTGGC...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGTTTGACCTCCTGCAGTaGGGGACACCAGAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKFDLLQ*GTPEMH Trigger: ATGCATTTCTGGTGTCCCTCACTGCAGGAGGTCAAA...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGACCTCTTTGACCTCCTaGAGTGAGGGACACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKTSLTS*SEGHQK Trigger: TTTCTGGTGTCCCTCACTGCAGGAGGTCAAAGAGGT...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGGGCCATGTTAACAACTaGAACAGCCACTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SETLETRQTVCLLGLVWKGHVNN*NSHCSR Trigger: TCTGCTGCAGTGGCTGTTCCAGTTGTTAACATGGCC...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAATGAGGCTGAGGAGCTaGCTGAGCAGGGCTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQMRLRS*LSRASW Trigger: CCAGCTAGCCCTGCTCAGCCAGCTCCTCAGCCTCAT...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGAGCAGGAGCAGGAGTTaGTGGAGGTCAGTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLSRSRS*WRSVLG Trigger: GCCCAAGACTGACCTCCAGCAACTCCTGCTCCTGCT...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGCCCAGAGGAAATCTCTaGGGTCCCAGCCTGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLPRGNL*GPSLLA Trigger: AGCCAACAGGCTGGGACCCCAGAGATTTCCTCTGGG...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGCCTGTGAATCCAGGCTaGCCTCACTCTCAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLPVNPG*PHSQAP Trigger: GGGTGCTTGAGAGTGAGGCCAGCCTGGATTCACAGG...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR TCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAATGTCTTTCCAAGGGCTaGAGTACTGACCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQCLSKG*STDPGA Trigger: AGCCCCAGGGTCAGTACTTCAGCCCTTGGAAAGACA...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGCTCCACCTTCTGGTTaGGATCTGGAGGGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQAPPSG*DLEGPS Trigger: AGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGC...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTCCAAGGCCACTTCCTaGGGAGGATCCTGTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLSKATS*GGSCES Trigger: GGATTCACAGGATCCTCCCCAGGAAGTGGCCTTGGA...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTTCCAGGCCACTCTTaGATTCTCTCCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLFPGHS*ILSSSR Trigger: CCTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAA...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAACTGAGCAGGGCTAGCTaGGTTTTCTCTGCCGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQLSRAS*VFSAEK Trigger: TTTCTCGGCAGAGAAAACCCAGCTAGCCCTGCTCAG...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR GCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAACCTCTTTGACCTCCTaGAGTGAGGGACACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQTSLTS*SEGHQK Trigger: TTTCTGGTGTCCCTCACTGCAGGAGGTCAAAGAGGT...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGAGTAATCTAAGTTATTaGTGTAGCATTGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSSSETLETRQTVCLSNLSY*CSIVSS Trigger: GGAGCTCACAATGCTACATCAATAACTTAGATTACT...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR TCA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAAGTAATCTAAGTTATTaGTGTAGCATTGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLICTNEPHIQDGQRGQSNLSY*CSIVSS Trigger: GGAGCTCACAATGCTACATCAATAACTTAGATTACT...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | GGCGTCACATCCAGGAAGAACTGCACGAGGGCCAGCAGGTTGTGGTaGTGGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTSRKNCTRASRLW*WSDTQLRAQQRGWS Trigger: GCTCCAGCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS CCA 90 bp | CGAGGCGTCACATCCAGGAAGAACTGCACGAGGGCCAGCAGGTTGTaGTGGTGGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGVTSRKNCTRASRL*WWSDTQLRAQQRGW Trigger: CCAGCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGACGCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGGTGGGGATGGTCAGGGACACAAGAACCCCTCGCTGGGTGGTGGCAGTACGAGGGCCAGCAGGTaGTGGTGGTGGTCGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LKGGDGQGHKNPSLGGGSTRASR*WWWSDT Trigger: GGTGTCCGACCACCACCACAACCTGCTGGCCCTCGT...ACTGCCACCACCCAGCGAGGGGTTCTTGTGTCCCTGACCATCCCCACCCTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS GCA 90 bp | TTGAGAAGCACCCACCTGCCCCGAGGCGTCACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTGTGGTGGTGGTCGGACACCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSTHLPRGVTSRKN*TRASRLWWWSDTQL Trigger: GAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGACGCCTCGGGGCAGGTGGGTGCTTCTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGACGAGGGCCAGCAGGTaGTGGTGGTGGTCGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SLPSPGWASSGSILHLLQTRASR*WWWSDT Trigger: GGTGTCCGACCACCACCACAACCTGCTGGCCCTCGT...CTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS GCA 90 bp | ACTGCAGCAGAGGCTGAGGGCAGTCAGCAGCATGCAGGTAGAGGTTaGTCAGGAGGCCATTGTGTAGGAAGGAGAGCTGCTCGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAAEAEGSQQHAGRG*SGGHCVGRRAARAA Trigger: CGCTGCCCGAGCAGCTCTCCTTCCTACACAATGGCCTCCTGAGCAACCTCTACCTGCATGCTGCTGACTGCCCTCAGCCTCTGCTGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS GCA 90 bp | CTACATCCAGGCCTGCGCGGCACAGCAGCTCCATCAGATCCAAGATaGTGGCATCCGTGTAGGACACTGGCCGGACTAGGAGACACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHPGLRGTAAPSDPR*WHPCRTLAGLGDTG Trigger: CCCTGTGTCTCCTAGTCCGGCCAGTGTCCTACACGGATGCCAGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAGGCCTGGATGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
||
| CDS GCA 90 bp | CTGGAGGTCAGTCTTGGGCAGCAGGCACAACCCTACATCCAGGCCTaGGCGGCACAGCAGCTCCATCAGATCCAAGATGCTGGCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LEVSLGQQAQPYIQA*AAQQLHQIQDAGIR Trigger: ACGGATGCCAGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAGGCCTGGATGTAGGGTTGTGCCTGCTGCCCAAGACTGACCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
||
| CDS CCA 90 bp | CATCCAGGCCTGCGCGGCACAGCAGCTCCATCAGATCCAAGATGCTaGCATCCGTGTAGGACACTGGCCGGACTAGGAGACACAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HPGLRGTAAPSDPRC*HPCRTLAGLGDTGS Trigger: TGACCCTGTGTCTCCTAGTCCGGCCAGTGTCCTACACGGATGCCAGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAGGCCTGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
||
| CDS CCA 90 bp | TTGTGGTGGTGGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGCTaGAGCTTTCCAGGCCACTCTTGGATTCTCTCCAGCAGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWWWSDTQLRAQQRG*SFPGHSWILSSSRS Trigger: GCTCCTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAAGCTCCAGCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | GTCACATCCAGGAAGAACTGCACGAGGGCCAGCAGGTTGTGGTGGTaGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGCTGGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTSRKNCTRASRLWW*SDTQLRAQQRGWSF Trigger: AAAGCTCCAGCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS-3UTR CAA 90 bp | GTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGTCACTCTCAAGCACCCTaGCGCTGTGCTGGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYLHQAGPPPAPFFTSYSHSQAP*RCAGRA Trigger: GGCCCTTCCAGCACAGCGCAAGGGTGCTTGAGAGTG...ACTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS TCA 90 bp | GGAGGCCATTGTGTAGGAAGGAGAGCTGCTCGGGCAGCGAGGACCTaGGGAACAGCTCTTCCAATGGGCTGTGCGGCTTTAGACGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGHCVGRRAARAART*GTALPMGCAALDER Trigger: CCTCTCGTCTAAAGCCGCACAGCCCATTGGAAGAGCTGTTCCTCAGGTCCTCGCTGCCCGAGCAGCTCTCCTTCCTACACAATGGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | GAAGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTGGTTGGGATCTaGAGGGTCCTTCTCCAAGTCCTCAAGGGGTCCCTTTTTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EELLQGGQLHLLVGI*RVLLQVLKGSLFGW Trigger: CCAGCCAAAAAGGGACCCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | CCCAGACACTGCCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGCTaGCTGAGCAGGGCTAGCTGGGTTTTCTCTGCCGAGAAAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRHCLRDEGLMRLRS*LSRASWVFSAEKGS Trigger: ACTTCCTTTCTCGGCAGAGAAAACCCAGCTAGCCCTGCTCAGCCAGCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCAGTGTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 ENSMUST00000194839.6 |
||
| CDS TCA 90 bp | GACTCCTGCTGGCCCAGCATCCGGGCAATAATCACAAGACTCAGCTaGCTTCTCAGCTGCCTGCCCCGAGGCGTCACATCCAGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSCWPSIRAIITRLS*LLSCLPRGVTSRKN Trigger: GTTCTTCCTGGATGTGACGCCTCGGGGCAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGATTATTGCCCGGATGCTGGGCCAGCAGGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
||
| CDS GCA 90 bp | GAGTGTTGCCCTAGACTGGATGGCAAGGTTTCAATGCCCAGACACTaGCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGCTGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECCPRLDGKVSMPRH*LRDEGLMRLRSWLS Trigger: GCTCAGCCAGCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCAGTGTCTGGGCATTGAAACCTTGCCATCCAGTCTAGGGCAACACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS GCA 90 bp | CTTGAGTTTGGTCCGGTGCATGGCAAGGTTTCAATGCCCAGACACTaGCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGCTGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEFGPVHGKVSMPRH*LRDEGLMRLRSWLS Trigger: GCTCAGCCAGCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCAGTGTCTGGGCATTGAAACCTTGCCATGCACCGGACCAAACTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTCTACCTTCACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCCTGCTGAACACCTCTTaGACCTCCTGCAGTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAVVYLHQAGPPPAPFFTLLNTS*TSCSEG Trigger: TCCCTCACTGCAGGAGGTCAAAGAGGTGTTCAGCAG...GGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTGAAGGTAGACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | TGTTCCAGAAGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTGGTTaGGATCTGGAGGGTCCTTCTCCAAGTCCTCAAGGGGTCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSRRAPPGRPAPPSG*DLEGPSPSPQGVPF Trigger: AAAAGGGACCCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCTTCTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS TCA 90 bp | CTGTGCGGCTTTAGACGAGAGGAGTCCAGGAAGCAAGGCAAAGGGTaGCGCCTAGGCAAGAATACAGTTTCACCCGGATGCACTGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCGFRREESRKQGKG*RLGKNTVSPGCTGE Trigger: CTCGCCAGTGCATCCGGGTGAAACTGTATTCTTGCCTAGGCGTCACCCTTTGCCTTGCTTCCTGGACTCCTCTCGTCTAAAGCCGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACTGCTGGAGGTCAGTCTaGGGCAGCAGGCACAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSRPCSLARHWPLSVALDCWRSV*GSRHNP Trigger: AGGGTTGTGCCTGCTGCCCAAGACTGACCTCCAGCA...GTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS TCA 90 bp | GACTCCTGCTGGCCCAGCATCCGGGCAATAATCACAAGACTCAGCTaGCTTCTCAGCTGCCTTTCCAGGCCACTCTTGGATTCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSCWPSIRAIITRLS*LLSCLSRPLLDSLQ Trigger: CTGGAGAGAATCCAAGAGTGGCCTGGAAAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGATTATTGCCCGGATGCTGGGCCAGCAGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS CCA 90 bp | CAAAGGGTGACGCCTAGGCAAGAATACAGTTTCACCCGGATGCACTaGCGAGATGACCTGCAGGGACACGGAGAACTTCTCCACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRVTPRQEYSFTRMH*RDDLQGHGELLHQH Trigger: ATGCTGGTGGAGAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATCCGGGTGAAACTGTATTCTTGCCTAGGCGTCACCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGGCTGGGCCTCCTCCGGCTCCATTCTTCACCTCCTACAGTTCTCTTCCTGCTGGAGGTGCTTTCTaGGGCTTGTTTAGGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQAGPPPAPFFTSYSSLPAGGAF*GLFRNS Trigger: AGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGC...AGGAAGAGAACTGTAGGAGGTGAAGAATGGAGCCGGAGGAGGCCCAGCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS CCA 90 bp | TCTCCAAGTCCTCAAGGGGTCCCTTTTTGGCTGGAGGTGCTTTCTTaGGCTTGTTTAGGAACTCTACAGGAGGTGGGCTCCAGTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPQGVPFWLEVLS*ACLGTLQEVGSSQW Trigger: CCACTGACTGGAGCCCACCTCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGAGGACTTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTTGAGTGTTGCCCTAGACCTTTCCAGGCCACTCTaGGATTCTCTCCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSRPCSLARHWPLSVALDLSRPL*DSLQQQ Trigger: CTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAAG...GTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
||
| CDS GCA 90 bp | CTAGGCAAGAATACAGTTTCACCCGGATGCACTGGCGAGATGACCTaGAGGGACACGGAGAACTTCTCCACCAGCATCCTCTTTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKNTVSPGCTGEMT*RDTENFSTSILFSC Trigger: GCAAGAAAAGAGGATGCTGGTGGAGAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATCCGGGTGAAACTGTATTCTTGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGCACTCTCAAGCACCCTaGCGCTGTGCTGGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSETLETRQTVCLLGLVWHSQAP*RCAGRA Trigger: GGCCCTTCCAGCACAGCGCAAGGGTGCTTGAGAGTG...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGACGAGGGCCAGCAGGTaGTGGTGGTGGTCGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SETLETRQTVCLLGLVWKTRASR*WWWSDT Trigger: GGTGTCCGACCACCACCACAACCTGCTGGCCCTCGT...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGTCCCGTGGGATGTGGTaGAGAAGCACCCACCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSETLETRQTVCLLGLVWSRGMW*RSTHLP Trigger: GGGCAGGTGGGTGCTTCTCAACCACATCCCACGGGA...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGTGCTGGAGGTCAGTCTaGGGCAGCAGGCACAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSETLETRQTVCLLGLVWCWRSV*GSRHNP Trigger: AGGGTTGTGCCTGCTGCCCAAGACTGACCTCCAGCA...CCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS TCA 90 bp | ACCTCCTGCAGTGAGGGACACCAGAAATGCATGTCTTCATCAGGCTaGCGGAACAGTCCATCTATACTGAGATCCCAGAGGAGGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSCSEGHQKCMSSSG*RNSPSILRSQRRPK Trigger: TTTTGGCCTCCTCTGGGATCTCAGTATAGATGGACTGTTCCGTCAGCCTGATGAAGACATGCATTTCTGGTGTCCCTCACTGCAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGTCCCAGCCTGTTGGCTaGGACTTGCCATGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SETLETRQTVCLLGLVWKSQPVG*DLPCSR Trigger: TCTGGAACATGGCAAGTCCAAGCCAACAGGCTGGGA...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGTCAAGGGGTCCCTTTTaGGCTGGAGGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SETLETRQTVCLLGLVWKSRGPF*AGGAFL Trigger: CAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGA...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGTTGGGGTTGGTATGGAAGGGAGGCCAAAAGCTCTaGAAGATGTTTCTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SETLETRQTVCLLGLVWKGGQKL*KMFLEA Trigger: GGCCTCCAGAAACATCTTCAAGAGCTTTTGGCCTCC...CTTCCATACCAACCCCAACAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | TTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTGCTTTCCAGGCCACTCTaGGATTCTCTCCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LICTNEPHIQDGQRGQGVLSRPL*DSLQQQ Trigger: CTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAAG...CACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS TCA 90 bp | AGAAATGCATGTCTTCATCAGGCTGACGGAACAGTCCATCTATACTaGGATCCCAGAGGAGGCCAAAAGCTCTTGAAGATGTTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RNACLHQADGTVHLY*DPRGGQKLLKMFLE Trigger: CTCCAGAAACATCTTCAAGAGCTTTTGGCCTCCTCTGGGATCTCAGTATAGATGGACTGTTCCGTCAGCCTGATGAAGACATGCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS-3UTR CAA 90 bp | TTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAAGGTGTGGGAGGCCAAAAGCTCTaGAAGATGTTTCTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LICTNEPHIQDGQRGQGVGGQKL*KMFLEA Trigger: GGCCTCCAGAAACATCTTCAAGAGCTTTTGGCCTCC...CACACCTTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CAA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAATGCTGGAGGTCAGTCTaGGGCAGCAGGCACAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: NTLICTNEPHIQDGQRGQCWRSV*GSRHNP Trigger: AGGGTTGTGCCTGCTGCCCAAGACTGACCTCCAGCA...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CAA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGCTGCTGAACACCTCTTaGACCTCCTGCAGTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CIFSSSSETLETRQTVCLLLNTS*TSCSEG Trigger: TCCCTCACTGCAGGAGGTCAAAGAGGTGTTCAGCAG...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
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| CDS-3UTR CAA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGCTTTCCAGGCCACTCTaGGATTCTCTCCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CIFSSSSETLETRQTVCLLSRPL*DSLQQQ Trigger: CTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAAG...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS-3UTR CAA 90 bp | AATACTTTAATATGCACAAATGAACCTCATATTCAAGATGGGCAGAGAGGGCAATCAAGGGGTCCCTTTTaGGCTGGAGGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTLICTNEPHIQDGQRGQSRGPF*AGGAFL Trigger: CAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGA...TTGCCCTCTCTGCCCATCTTGAATATGAGGTTCATTTGTGCATATTAAAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS-3UTR CAA 90 bp | TGTATTTTTAGTTCTTCCTCTGAGACTTTAGAAACCAGGCAGACAGTTTGTTTGGCTGGAGGTGCTTTCTaGGGCTTGTTTAGGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CIFSSSSETLETRQTVCLAGGAF*GLFRNS Trigger: AGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGC...CAAACAAACTGTCTGCCTGGTTTCTAAAGTCTCAGAGGAAGAACTAAAAATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
||
| CDS CCA 72 bp | CTCAAGCACCCTTGCGCTGTGCTGGAAGGGCCCCTGTaGGTACAGGGCGGGGTTGTAGGCTCCCAGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LKHPCAVLEGPL*VQGGVVGSQAA Trigger: AGCAGCCTGGGAGCCTACAACCCCGCCCTGTACCCACAGGGGCCCTTCCAGCACAGCGCAAGGGTGCTTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS GCA 72 bp | ACCCACCTGCCCCGAGGCGTCACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTGTGGTGGTGGTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: THLPRGVTSRKN*TRASRLWWWSD Trigger: GTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGACGCCTCGGGGCAGGTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114981.3 |
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| CDS GCA 72 bp | AGCTGCCTGCCCCGAGGCGTCACATCCAGGAAGAACTaGACGAGGGCCAGCAGGTTGTGGTGGTGGTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SCLPRGVTSRKN*TRASRLWWWSD Trigger: GTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGTGACGCCTCGGGGCAGGCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS CCA 72 bp | AGGAAGAACTGCACGAGGGCCAGCAGGTTGTGGTGGTaGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKNCTRASRLWW*SDTQLRAQQRG Trigger: GCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS GCA 72 bp | GGCCTGCGCGGCACAGCAGCTCCATCAGATCCAAGATaGTGGCATCCGTGTAGGACACTGGCCGGACTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLRGTAAPSDPR*WHPCRTLAGLG Trigger: TCCTAGTCCGGCCAGTGTCCTACACGGATGCCAGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAGGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
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| CDS CCA 72 bp | TCCAGGAAGAACTGCACGAGGGCCAGCAGGTTGTGGTaGTGGTCGGACACCCAGCTCAGGGCACAGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRKNCTRASRLW*WSDTQLRAQQR Trigger: CCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS CCA 72 bp | TGCCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGCTaGCTGAGCAGGGCTAGCTGGGTTTTCTCTGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CLRDEGLMRLRS*LSRASWVFSAE Trigger: CTCGGCAGAGAAAACCCAGCTAGCCCTGCTCAGCCAGCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 ENSMUST00000194839.6 |
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| CDS GCA 72 bp | GGTCCGGTGCATGGCAAGGTTTCAATGCCCAGACACTaGCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPVHGKVSMPRH*LRDEGLMRLRS Trigger: GCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCAGTGTCTGGGCATTGAAACCTTGCCATGCACCGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194025.2 |
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| CDS CCA 72 bp | CTCCAGGGAGGCCAGCTCCACCTTCTGGTTGGGATCTaGAGGGTCCTTCTCCAAGTCCTCAAGGGGTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQGGQLHLLVGI*RVLLQVLKGSL Trigger: AAGGGACCCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | AGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTGGTTaGGATCTGGAGGGTCCTTCTCCAAGTCCTCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RAPPGRPAPPSG*DLEGPSPSPQG Trigger: CCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | AGGCCACTTCCTGGGGAGGATCCTGTGAATCCAGGCTaGCCTCACTCTCAAGCACCCTTGCGCTGTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPLPGEDPVNPG*PHSQAPLRCAG Trigger: TCCAGCACAGCGCAAGGGTGCTTGAGAGTGAGGCCAGCCTGGATTCACAGGATCCTCCCCAGGAAGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | CTGCGCGGCACAGCAGCTCCATCAGATCCAAGATGCTaGCATCCGTGTAGGACACTGGCCGGACTAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRGTAAPSDPRC*HPCRTLAGLGD Trigger: GTCTCCTAGTCCGGCCAGTGTCCTACACGGATGCCAGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
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| CDS CCA 72 bp | TGGTCGGACACCCAGCTCAGGGCACAGCAAAGGGGCTaGAGCTTTCCAGGCCACTCTTGGATTCTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WSDTQLRAQQRG*SFPGHSWILSS Trigger: GCTGGAGAGAATCCAAGAGTGGCCTGGAAAGCTCCAGCCCCTTTGCTGTGCCCTGAGCTGGGTGTCCGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | ACATCCAGGAAGAACTGCACGAGGGCCAGCAGGTTGTaGTGGTGGTCGGACACCCAGCTCAGGGCACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSRKNCTRASRL*WWSDTQLRAQQ Trigger: TTGCTGTGCCCTGAGCTGGGTGTCCGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCTGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS TCA 72 bp | TGGCCCAGCATCCGGGCAATAATCACAAGACTCAGCTaGCTTCTCAGCTGCCTGCCCCGAGGCGTCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: WPSIRAIITRLS*LLSCLPRGVTS Trigger: GGATGTGACGCCTCGGGGCAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGATTATTGCCCGGATGCTGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 |
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| CDS GCA 72 bp | GGAAATCTCTGGGGTCCCAGCCTGTTGGCTTGGACTTaGCATGTTCCAGAAGAGCTCCTCCAGGGAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GNLWGPSLLAWT*HVPEELLQGGQ Trigger: CTGGCCTCCCTGGAGGAGCTCTTCTGGAACATGGCAAGTCCAAGCCAACAGGCTGGGACCCCAGAGATTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS GCA 72 bp | AGTCTTGGGCAGCAGGCACAACCCTACATCCAGGCCTaGGCGGCACAGCAGCTCCATCAGATCCAAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGQQAQPYIQA*AAQQLHQIQDA Trigger: AGCATCTTGGATCTGATGGAGCTGCTGTGCCGCGCAGGCCTGGATGTAGGGTTGTGCCTGCTGCCCAAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 ENSMUST00000194839.6 |
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| CDS CCA 72 bp | CAGAAGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTaGTTGGGATCTGGAGGGTCCTTCTCCAAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QKSSSREASSTF*LGSGGSFSKSS Trigger: TGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 72 bp | AAGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTGGTaGGGATCTGGAGGGTCCTTCTCCAAGTCCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSSSREASSTFW*GSGGSFSKSSR Trigger: CCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 72 bp | GGCACAGCAAAGGGGCTGGAGCTTTCCAGGCCACTCTaGGATTCTCTCCAGCAGCAGGAGCAGGAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTAKGLELSRPL*DSLQQQEQELL Trigger: CAGCAACTCCTGCTCCTGCTGCTGGAGAGAATCCAAGAGTGGCCTGGAAAGCTCCAGCCCCTTTGCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 90 bp | ATGTTCCAGAAGAGCTCCTCCAGGGAGGCCAGCTCCACCTTCTGGTaGGGATCTGGAGGGTCCTTCTCCAAGTCCTCAAGGGGTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MFQKSSSREASSTFW*GSGGSFSKSSRGPF Trigger: AAAGGGACCCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAACCAGAAGGTGGAGCTGGCCTCCCTGGAGGAGCTCTTCTGGAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS GCA 72 bp | GAGGCTGAGGGCAGTCAGCAGCATGCAGGTAGAGGTTaGTCAGGAGGCCATTGTGTAGGAAGGAGAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAEGSQQHAGRG*SGGHCVGRRAA Trigger: AGCAGCTCTCCTTCCTACACAATGGCCTCCTGAGCAACCTCTACCTGCATGCTGCTGACTGCCCTCAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS GCA 72 bp | CCTAGACTGGATGGCAAGGTTTCAATGCCCAGACACTaGCTGAGGGACGAAGGCCTCATGAGGCTGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRLDGKVSMPRH*LRDEGLMRLRS Trigger: GCTCCTCAGCCTCATGAGGCCTTCGTCCCTCAGGCAGTGTCTGGGCATTGAAACCTTGCCATCCAGTCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS CCA 72 bp | GAGCTCCCAGAGGAAATCTCTGGGGTCCCAGCCTGTTaGCTTGGACTTGCCATGTTCCAGAAGAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELPEEISGVPAC*LGLAMFQKSSS Trigger: GGAGGAGCTCTTCTGGAACATGGCAAGTCCAAGCCAACAGGCTGGGACCCCAGAGATTTCCTCTGGGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 72 bp | AGGAAATCTCTGGGGTCCCAGCCTGTTGGCTTGGACTaGCCATGTTCCAGAAGAGCTCCTCCAGGGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKSLGSQPVGLD*PCSRRAPPGRP Trigger: TGGCCTCCCTGGAGGAGCTCTTCTGGAACATGGCAAGTCCAAGCCAACAGGCTGGGACCCCAGAGATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 72 bp | TCCCAGAGGAAATCTCTGGGGTCCCAGCCTGTTGGCTaGGACTTGCCATGTTCCAGAAGAGCTCCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQRKSLGSQPVG*DLPCSRRAPPG Trigger: CCCTGGAGGAGCTCTTCTGGAACATGGCAAGTCCAAGCCAACAGGCTGGGACCCCAGAGATTTCCTCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS TCA 72 bp | GCAAGAATACAGTTTCACCCGGATGCACTGGCGAGATaGCCTGCAGGGACACGGAGAACTTCTCCACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARIQFHPDALAR*PAGTRRTSPPA Trigger: TGCTGGTGGAGAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATCCGGGTGAAACTGTATTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS GCA 72 bp | AATACAGTTTCACCCGGATGCACTGGCGAGATGACCTaGAGGGACACGGAGAACTTCTCCACCAGCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NTVSPGCTGEMT*RDTENFSTSIL Trigger: GAGGATGCTGGTGGAGAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATCCGGGTGAAACTGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | CCTCAAGGGGTCCCTTTTTGGCTGGAGGTGCTTTCTTaGGCTTGTTTAGGAACTCTACAGGAGGTGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PQGVPFWLEVLS*ACLGTLQEVGS Trigger: GGAGCCCACCTCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CCA 72 bp | ACGCCTAGGCAAGAATACAGTTTCACCCGGATGCACTaGCGAGATGACCTGCAGGGACACGGAGAACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPRQEYSFTRMH*RDDLQGHGELL Trigger: GAGAAGTTCTCCGTGTCCCTGCAGGTCATCTCGCCAGTGCATCCGGGTGAAACTGTATTCTTGCCTAGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS TCA 72 bp | TCCCAGGCTGCTGAACACCTCTTTGACCTCCTGCAGTaGGGGACACCAGAAATGCATGTCTTCATCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQAAEHLFDLLQ*GTPEMHVFIRL Trigger: CAGCCTGATGAAGACATGCATTTCTGGTGTCCCTCACTGCAGGAGGTCAAAGAGGTGTTCAGCAGCCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS TCA 72 bp | TGGCCCAGCATCCGGGCAATAATCACAAGACTCAGCTaGCTTCTCAGCTGCCTTTCCAGGCCACTCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: WPSIRAIITRLS*LLSCLSRPLLD Trigger: ATCCAAGAGTGGCCTGGAAAGGCAGCTGAGAAGTCAGCTGAGTCTTGTGATTATTGCCCGGATGCTGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194839.6 |
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| CDS GCA 72 bp | AGCTGGGTTTTCTCTGCCGAGAAAGGAAGTGACTCCTaGTGGCCCAGCATCCGGGCAATAATCACAAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SWVFSAEKGSDS*WPSIRAIITRL Trigger: GAGTCTTGTGATTATTGCCCGGATGCTGGGCCAGCAGGAGTCACTTCCTTTCTCGGCAGAGAAAACCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 ENSMUST00000194839.6 |
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| CDS CCA 72 bp | TGGGTTTTCTCTGCCGAGAAAGGAAGTGACTCCTGCTaGCCCAGCATCCGGGCAATAATCACAAGACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WVFSAEKGSDSC*PSIRAIITRLS Trigger: GCTGAGTCTTGTGATTATTGCCCGGATGCTGGGCCAGCAGGAGTCACTTCCTTTCTCGGCAGAGAAAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170295.8 ENSMUST00000194025.2 ENSMUST00000194839.6 |
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| CDS CAA 72 bp | AGGGGTCCCTTTTTGGCTGGAGGTGCTTTCTTGGGCTaGTTTAGGAACTCTACAGGAGGTGGGCTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGPFLAGGAFLG*FRNSTGGGLQS Trigger: TGACTGGAGCCCACCTCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS CAA 72 bp | TCCTCAAGGGGTCCCTTTTTGGCTGGAGGTGCTTTCTaGGGCTTGTTTAGGAACTCTACAGGAGGTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRGPFLAGGAF*GLFRNSTGGGL Trigger: GAGCCCACCTCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 90 bp | TTCTCCAAGTCCTCAAGGGGTCCCTTTTTGGCTGGAGGTGCTTTCTaGGGCTTGTTTAGGAACTCTACAGGAGGTGGGCTCCAGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKSSRGPFLAGGAF*GLFRNSTGGGLQSV Trigger: CACTGACTGGAGCCCACCTCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGAGGACTTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
||
| CDS CAA 90 bp | TGTGGCACAGATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTaGAGTGTTGCCCTAGACTGGATGGCAAGGTTTCAATGCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CGTDSRPCSLARHWP*SVALDWMARFQCPD Trigger: GTCTGGGCATTGAAACCTTGCCATCCAGTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATCTGTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
||
| CDS TCA 72 bp | TTTAGACGAGAGGAGTCCAGGAAGCAAGGCAAAGGGTaGCGCCTAGGCAAGAATACAGTTTCACCCGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: FRREESRKQGKG*RLGKNTVSPGC Trigger: GCATCCGGGTGAAACTGTATTCTTGCCTAGGCGTCACCCTTTGCCTTGCTTCCTGGACTCCTCTCGTCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 90 bp | TTGGGATCTGGAGGGTCCTTCTCCAAGTCCTCAAGGGGTCCCTTTTaGGCTGGAGGTGCTTTCTTGGGCTTGTTTAGGAACTCTACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGSGGSFSKSSRGPF*AGGAFLGLFRNSTG Trigger: TCCTGTAGAGTTCCTAAACAAGCCCAAGAAAGCACCTCCAGCCAAAAAGGGACCCCTTGAGGACTTGGAGAAGGACCCTCCAGATCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS CAA 72 bp | GATAGCAGACCTTGTAGTCTAGCTCGGCACTGGCCTTaGAGTGTTGCCCTAGACTGGATGGCAAGGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: DSRPCSLARHWP*SVALDWMARFQ Trigger: TTGAAACCTTGCCATCCAGTCTAGGGCAACACTCAAAGGCCAGTGCCGAGCTAGACTACAAGGTCTGCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170295.8 |
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| CDS TCA 72 bp | AGTGAGGGACACCAGAAATGCATGTCTTCATCAGGCTaGCGGAACAGTCCATCTATACTGAGATCCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SEGHQKCMSSSG*RNSPSILRSQR Trigger: CCTCTGGGATCTCAGTATAGATGGACTGTTCCGTCAGCCTGATGAAGACATGCATTTCTGGTGTCCCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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| CDS TCA 72 bp | TGTCTTCATCAGGCTGACGGAACAGTCCATCTATACTaGGATCCCAGAGGAGGCCAAAAGCTCTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: CLHQADGTVHLY*DPRGGQKLLKM Trigger: CATCTTCAAGAGCTTTTGGCCTCCTCTGGGATCTCAGTATAGATGGACTGTTCCGTCAGCCTGATGAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114981.3 ENSMUST00000170295.8 |
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