RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM174C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035595

Ensembl transcript IDs: ENSMUST00000041882.7

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTaGCCTTGGGGCCCTCCAGTCTGTGGGCTAGTCTCAATGAGGTCT +
Preference number: 1 (lower is better)
Translates to: LSLTGGRLTEQPTSA*PWGPPVCGLVSMRS
Trigger: AGACCTCATTGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR TCA 90 bp TCTATGCTGCCCCCTAGGGCCTGTGCAGGCTCTGTCCAGGAAGGTTaGCATCAGAGCTCACAGAACTACATGTTTTCTCTTGTCCTTGCA +
Preference number: 1 (lower is better)
Translates to: SMLPPRACAGSVQEG*HQSSQNYMFSLVLA
Trigger: TGCAAGGACAAGAGAAAACATGTAGTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGAGCCTGCACAGGCCCTAGGGGGCAGCATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CAA 90 bp CCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTGGCCTaGGGGCCCTCCAGTCTGTGGGCTAGTCTCAATGAGGTCTCTATG +
Preference number: 2 (lower is better)
Translates to: PYRRQADGAAHISLA*GPSSLWASLNEVSM
Trigger: CATAGAGACCTCATTGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR CCA 90 bp AGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGACATCAGCCTGGCCTTaGGGCCCTCCAGTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: RKAHRDPQAPCSITPYQRTSAWP*GPPVCG
Trigger: CCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGT...CCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR GCA 90 bp TCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCATGAGGTCTCTATGCTaGCCCCTAGGGCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: SEDALVPYRRQADGAAHIMRSLC*PLGPVQ
Trigger: CTGCACAGGCCCTAGGGGGCAGCATAGAGACCTCAT...GATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR GCA 90 bp CAAAGCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTGTTTTCTCTTGTCCTTaGAGCCTGTCATCTCCATCT +
Preference number: 2 (lower is better)
Translates to: QSSRKAHRDPQAPCSITPVFSCP*SLSSPS
Trigger: AGATGGAGATGACAGGCTGCAAGGACAAGAGAAAAC...AGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CAA 90 bp AGGGGGAGGTCTCAGATAAGCTACAAAGCCACTCTTCATTTATTGTaGCCAAAGCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: RGRSQISYKATLHLL*PKQQEGAQRSSGPL
Trigger: CAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGACCTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR TCA 90 bp TCCATCACACCTTATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGTCTGTCCAGGAAGGTTaGCATCAGAGCTCACAGAAC +
Preference number: 2 (lower is better)
Translates to: SITPYQRMLLSLTGGRLTSVQEG*HQSSQN
Trigger: GTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGA...CGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGTGTGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CCA 72 bp ACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTaGCCTTGGGGCCCTCCAGTCTGTGGGCTAGTCTCA +
Preference number: 3 (lower is better)
Translates to: TGGRLTEQPTSA*PWGPPVCGLVS
Trigger: TGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR CAA 90 bp GCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCCACATCAGCCTGGCCTaGGGGCCCTCCAGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: AAGRRTEILRPPAPSHLIHISLA*GPSSLW
Trigger: CCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTG...GATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR TCA 72 bp ATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTaGCGGAGCAGCCCACATCAGCCTGGCCTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: IRGCSCPLQEAG*RSSPHQPGLGA
Trigger: GGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR CAA 90 bp ACCTTATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCTCTGTCCAGGAAGGTaGACATCAGAGCTCACAGAA +
Preference number: 3 (lower is better)
Translates to: TLSEDALVPYRRQADGAALCPGR*TSELTE
Trigger: TTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGAG...GGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR-3UTR CAA 90 bp GCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGATGCTCACTACATGTTTTCTCTaGTCCTTGCAGCCTGTCATC +
Preference number: 3 (lower is better)
Translates to: AHRDPQAPCSITPYQRMLTTCFL*SLQPVI
Trigger: GATGACAGGCTGCAAGGACAAGAGAAAACATGTAGT...GAGCATCCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CAA 72 bp GCCCCCTGCTCCATCACACCTTATCAGAGGATGCTCTaGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: APCSITPYQRML*SLTGGRLTEQP
Trigger: GGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGTGTGATGGAGCAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS-3UTR GCA 90 bp GAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGATGAGGCCATCTCTTCATaGTCCTCCGTGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGAQRSSGPLLHHTLSEDEAISS*SSVLVR
Trigger: CCTGACCAACACGGAGGAGCATGAAGAGATGGCCTC...ATCCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS-3UTR TCA 90 bp CCAGTCTGTGGGCTAGTCTCAATGAGGTCTCTATGCTGCCCCCTAGGGCCTGTGATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: PVCGLVSMRSLCCPLGPVIPPSL*LLESKS
Trigger: GCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTAT...CACAGGCCCTAGGGGGCAGCATAGAGACCTCATTGAGACTAGCCCACAGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS-3UTR CCA 90 bp CTGTCCAGGAAGGTTGACATCAGAGCTCACAGAACTACATGTTTTCTCTTGTCCCATGCTCCTCCGTGTTaGTCAGGAGCCCATACCTCC +
Preference number: 4 (lower is better)
Translates to: LSRKVDIRAHRTTCFLLSHAPPC*SGAHTS
Trigger: GGAGGTATGGGCTCCTGACCAACACGGAGGAGCATG...GGACAAGAGAAAACATGTAGTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CAA 72 bp AGGTCTCAGATAAGCTACAAAGCCACTCTTCATTTATaGTTGCCAAAGCAGCAGGAAGGCGCACAGAGATCC +
Preference number: 4 (lower is better)
Translates to: RSQISYKATLHL*LPKQQEGAQRS
Trigger: GGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
3UTR CAA 72 bp TCTCAGATAAGCTACAAAGCCACTCTTCATTTATTGTaGCCAAAGCAGCAGGAAGGCGCACAGAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SQISYKATLHLL*PKQQEGAQRSS
Trigger: TGAGGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS CCA 90 bp GCCCGTGTCCCTGTCCGGGAGCCTCCCGTTTGTGTGGTTATAAGGTaGGCCCGGCAGGCTGGAGTTTTCAGCGGAACCAGGGTTGCTACA +
Preference number: 5 (lower is better)
Translates to: ARVPVREPPVCVVIR*ARQAGVFSGTRVAT
Trigger: TGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGAGGCTCCCGGACAGGGACACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS CCA 90 bp CCGGGAGCCTCCCGTTTGTGTGGTTATAAGGTGGGCCCGGCAGGCTaGAGTTTTCAGCGGAACCAGGGTTGCTACACCAGAGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PGASRLCGYKVGPAG*SFQRNQGCYTRGAA
Trigger: TGCTGCTCCTCTGGTGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGAGGCTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS TCA 90 bp TTCATGCTCCTCCGTGTTGGTCAGGAGCCCATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGCCCGGATGAGGAAGTAAAGCGAGAT +
Preference number: 5 (lower is better)
Translates to: FMLLRVGQEPIPPSL*LLESKSPDEEVKRD
Trigger: ATCTCGCTTTACTTCCTCATCCGGGCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTATGGGCTCCTGACCAACACGGAGGAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS CCA 72 bp TCCCGTTTGTGTGGTTATAAGGTGGGCCCGGCAGGCTaGAGTTTTCAGCGGAACCAGGGTTGCTACACCAGA +
Preference number: 6 (lower is better)
Translates to: SRLCGYKVGPAG*SFQRNQGCYTR
Trigger: TCTGGTGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7
CDS TCA 72 bp CTCCGTGTTGGTCAGGAGCCCATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGCCCGGATGAGGAAGTA +
Preference number: 6 (lower is better)
Translates to: LRVGQEPIPPSL*LLESKSPDEEV
Trigger: TACTTCCTCATCCGGGCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTATGGGCTCCTGACCAACACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041882.7