Pregenerated sensors for FAM174C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035595Ensembl transcript IDs: ENSMUST00000041882.7
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTaGCCTTGGGGCCCTCCAGTCTGTGGGCTAGTCTCAATGAGGTCT | + |
Preference number: 1 (lower is better) Translates to: LSLTGGRLTEQPTSA*PWGPPVCGLVSMRS Trigger: AGACCTCATTGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR TCA 90 bp | TCTATGCTGCCCCCTAGGGCCTGTGCAGGCTCTGTCCAGGAAGGTTaGCATCAGAGCTCACAGAACTACATGTTTTCTCTTGTCCTTGCA | + |
Preference number: 1 (lower is better) Translates to: SMLPPRACAGSVQEG*HQSSQNYMFSLVLA Trigger: TGCAAGGACAAGAGAAAACATGTAGTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGAGCCTGCACAGGCCCTAGGGGGCAGCATAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CAA 90 bp | CCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTGGCCTaGGGGCCCTCCAGTCTGTGGGCTAGTCTCAATGAGGTCTCTATG | + |
Preference number: 2 (lower is better) Translates to: PYRRQADGAAHISLA*GPSSLWASLNEVSM Trigger: CATAGAGACCTCATTGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR CCA 90 bp | AGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGACATCAGCCTGGCCTTaGGGCCCTCCAGTCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: RKAHRDPQAPCSITPYQRTSAWP*GPPVCG Trigger: CCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGT...CCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR GCA 90 bp | TCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCACATCATGAGGTCTCTATGCTaGCCCCTAGGGCCTGTGCAG | + |
Preference number: 2 (lower is better) Translates to: SEDALVPYRRQADGAAHIMRSLC*PLGPVQ Trigger: CTGCACAGGCCCTAGGGGGCAGCATAGAGACCTCAT...GATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR GCA 90 bp | CAAAGCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTGTTTTCTCTTGTCCTTaGAGCCTGTCATCTCCATCT | + |
Preference number: 2 (lower is better) Translates to: QSSRKAHRDPQAPCSITPVFSCP*SLSSPS Trigger: AGATGGAGATGACAGGCTGCAAGGACAAGAGAAAAC...AGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CAA 90 bp | AGGGGGAGGTCTCAGATAAGCTACAAAGCCACTCTTCATTTATTGTaGCCAAAGCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTG | + |
Preference number: 2 (lower is better) Translates to: RGRSQISYKATLHLL*PKQQEGAQRSSGPL Trigger: CAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGACCTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR TCA 90 bp | TCCATCACACCTTATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGTCTGTCCAGGAAGGTTaGCATCAGAGCTCACAGAAC | + |
Preference number: 2 (lower is better) Translates to: SITPYQRMLLSLTGGRLTSVQEG*HQSSQN Trigger: GTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGA...CGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGTGTGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CCA 72 bp | ACAGGAGGCAGGCTGACGGAGCAGCCCACATCAGCCTaGCCTTGGGGCCCTCCAGTCTGTGGGCTAGTCTCA | + |
Preference number: 3 (lower is better) Translates to: TGGRLTEQPTSA*PWGPPVCGLVS Trigger: TGAGACTAGCCCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR CAA 90 bp | GCAGCAGGAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCCACATCAGCCTGGCCTaGGGGCCCTCCAGTCTGTGG | + |
Preference number: 3 (lower is better) Translates to: AAGRRTEILRPPAPSHLIHISLA*GPSSLW Trigger: CCACAGACTGGAGGGCCCCAAGGCCAGGCTGATGTG...GATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR TCA 72 bp | ATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTaGCGGAGCAGCCCACATCAGCCTGGCCTTGGGGCC | + |
Preference number: 3 (lower is better) Translates to: IRGCSCPLQEAG*RSSPHQPGLGA Trigger: GGCCCCAAGGCCAGGCTGATGTGGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR CAA 90 bp | ACCTTATCAGAGGATGCTCTTGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCCTCTGTCCAGGAAGGTaGACATCAGAGCTCACAGAA | + |
Preference number: 3 (lower is better) Translates to: TLSEDALVPYRRQADGAALCPGR*TSELTE Trigger: TTCTGTGAGCTCTGATGTCAACCTTCCTGGACAGAG...GGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR-3UTR CAA 90 bp | GCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGATGCTCACTACATGTTTTCTCTaGTCCTTGCAGCCTGTCATC | + |
Preference number: 3 (lower is better) Translates to: AHRDPQAPCSITPYQRMLTTCFL*SLQPVI Trigger: GATGACAGGCTGCAAGGACAAGAGAAAACATGTAGT...GAGCATCCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CAA 72 bp | GCCCCCTGCTCCATCACACCTTATCAGAGGATGCTCTaGTCCCTTACAGGAGGCAGGCTGACGGAGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: APCSITPYQRML*SLTGGRLTEQP Trigger: GGGCTGCTCCGTCAGCCTGCCTCCTGTAAGGGACAAGAGCATCCTCTGATAAGGTGTGATGGAGCAGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS-3UTR GCA 90 bp | GAAGGCGCACAGAGATCCTCAGGCCCCCTGCTCCATCACACCTTATCAGAGGATGAGGCCATCTCTTCATaGTCCTCCGTGTTGGTCAGG | + |
Preference number: 4 (lower is better) Translates to: EGAQRSSGPLLHHTLSEDEAISS*SSVLVR Trigger: CCTGACCAACACGGAGGAGCATGAAGAGATGGCCTC...ATCCTCTGATAAGGTGTGATGGAGCAGGGGGCCTGAGGATCTCTGTGCGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS-3UTR TCA 90 bp | CCAGTCTGTGGGCTAGTCTCAATGAGGTCTCTATGCTGCCCCCTAGGGCCTGTGATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGC | + |
Preference number: 4 (lower is better) Translates to: PVCGLVSMRSLCCPLGPVIPPSL*LLESKS Trigger: GCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTAT...CACAGGCCCTAGGGGGCAGCATAGAGACCTCATTGAGACTAGCCCACAGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS-3UTR CCA 90 bp | CTGTCCAGGAAGGTTGACATCAGAGCTCACAGAACTACATGTTTTCTCTTGTCCCATGCTCCTCCGTGTTaGTCAGGAGCCCATACCTCC | + |
Preference number: 4 (lower is better) Translates to: LSRKVDIRAHRTTCFLLSHAPPC*SGAHTS Trigger: GGAGGTATGGGCTCCTGACCAACACGGAGGAGCATG...GGACAAGAGAAAACATGTAGTTCTGTGAGCTCTGATGTCAACCTTCCTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CAA 72 bp | AGGTCTCAGATAAGCTACAAAGCCACTCTTCATTTATaGTTGCCAAAGCAGCAGGAAGGCGCACAGAGATCC | + |
Preference number: 4 (lower is better) Translates to: RSQISYKATLHL*LPKQQEGAQRS Trigger: GGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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3UTR CAA 72 bp | TCTCAGATAAGCTACAAAGCCACTCTTCATTTATTGTaGCCAAAGCAGCAGGAAGGCGCACAGAGATCCTCA | + |
Preference number: 4 (lower is better) Translates to: SQISYKATLHLL*PKQQEGAQRSS Trigger: TGAGGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATGAAGAGTGGCTTTGTAGCTTATCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS CCA 90 bp | GCCCGTGTCCCTGTCCGGGAGCCTCCCGTTTGTGTGGTTATAAGGTaGGCCCGGCAGGCTGGAGTTTTCAGCGGAACCAGGGTTGCTACA | + |
Preference number: 5 (lower is better) Translates to: ARVPVREPPVCVVIR*ARQAGVFSGTRVAT Trigger: TGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGAGGCTCCCGGACAGGGACACGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS CCA 90 bp | CCGGGAGCCTCCCGTTTGTGTGGTTATAAGGTGGGCCCGGCAGGCTaGAGTTTTCAGCGGAACCAGGGTTGCTACACCAGAGGAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: PGASRLCGYKVGPAG*SFQRNQGCYTRGAA Trigger: TGCTGCTCCTCTGGTGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGAGGCTCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS TCA 90 bp | TTCATGCTCCTCCGTGTTGGTCAGGAGCCCATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGCCCGGATGAGGAAGTAAAGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: FMLLRVGQEPIPPSL*LLESKSPDEEVKRD Trigger: ATCTCGCTTTACTTCCTCATCCGGGCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTATGGGCTCCTGACCAACACGGAGGAGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS CCA 72 bp | TCCCGTTTGTGTGGTTATAAGGTGGGCCCGGCAGGCTaGAGTTTTCAGCGGAACCAGGGTTGCTACACCAGA | + |
Preference number: 6 (lower is better) Translates to: SRLCGYKVGPAG*SFQRNQGCYTR Trigger: TCTGGTGTAGCAACCCTGGTTCCGCTGAAAACTCCAGCCTGCCGGGCCCACCTTATAACCACACAAACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |
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CDS TCA 72 bp | CTCCGTGTTGGTCAGGAGCCCATACCTCCTTCGCTGTaGCTTCTTGAGTCTAAAAGCCCGGATGAGGAAGTA | + |
Preference number: 6 (lower is better) Translates to: LRVGQEPIPPSL*LLESKSPDEEV Trigger: TACTTCCTCATCCGGGCTTTTAGACTCAAGAAGTCACAGCGAAGGAGGTATGGGCTCCTGACCAACACGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041882.7 |