Pregenerated sensors for FAM174A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051185Ensembl transcript IDs: ENSMUST00000059975.8, ENSMUST00000186780.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTaGCTACTAAACAACTCTGGTGAAGGAAGAGCTATGTGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: IASHELGSDSSLLSY*LLNNSGEGRAMCSS Trigger: ACTGCTGCACATAGCTCTTCCTTCACCAGAGTTGTTTAGTAGCCAATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR TCA 90 bp | GAAGAGCTATGTGCAGCAGTTACTGATCTAACAGTGAGGCCACCATaGTCCAGTGGATATGTGCATACCAGTGTTTCTCAAAAACAAACA | + |
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Preference number: 1 (lower is better) Translates to: EELCAAVTDLTVRPP*SSGYVHTSVSQKQT Trigger: TGTTTGTTTTTGAGAAACACTGGTATGCACATATCCACTGGATCATGGTGGCCTCACTGTTAGATCAGTAACTGCTGCACATAGCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR GCA 90 bp | TGTGGTTTATGTCCATTCCAGCACAGCCTTGTGAATGAAATCCATTaGTTGAGCAGGACAAAGAACTTCATTAAACAGAACCAAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: CGLCPFQHSLVNEIH*LSRTKNFIKQNQIK Trigger: TTTTATTTGGTTCTGTTTAATGAAGTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGCTGGAATGGACATAAACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CAA 90 bp | GGAACATTGTCTTCAGGACATGGCACAGCCACTGCAAACGGCAGCTaGAGTCTTCTGCACTGGGCCTGTATACCACTGAACCTGTCCATA | + |
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Preference number: 2 (lower is better) Translates to: GTLSSGHGTATANGS*SLLHWACIPLNLSI Trigger: TATGGACAGGTTCAGTGGTATACAGGCCCAGTGCAGAAGACTCAAGCTGCCGTTTGCAGTGGCTGTGCCATGTCCTGAAGACAATGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | ACATTGTCTTCAGGACATGGCACAGCCACTGCAAACGGCAGCTTGAGTCTTCTGACAGTGAGGCCACCATaGTCCAGTGGATATGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TLSSGHGTATANGSLSLLTVRPP*SSGYVH Trigger: ATGCACATATCCACTGGATCATGGTGGCCTCACTGT...CAGAAGACTCAAGCTGCCGTTTGCAGTGGCTGTGCCATGTCCTGAAGACAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGCCTAAGCAGGGCATTTaGGCCACCCCAATGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKPKQGI*ATPMRL Trigger: GAGCCTCATTGGGGTGGCTCAAATGCCCTGCTTAGG...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTGTCCATAGCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTGTACTTCAACTGTCTaGGCAAAGGTTTGCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: NLSIASHELGSDSSLLSYCTSTV*AKVCIL Trigger: CAAGATGCAAACCTTTGCTCAGACAGTTGAAGTACA...ATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGCTATGGACAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGGCCACCATGATCCAGTaGATATGTGCATACCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SSTPNSTDSCHSSVSPSEATMIQ*ICAYQC Trigger: ACACTGGTATGCACATATCCACTGGATCATGGTGGC...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTGGCTACTAAACAGTGAATGTATACTGTaGTTTATGTCCATTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ASHELGSDSSLLSYWLLNSECIL*FMSIPA Trigger: TGCTGGAATGGACATAAACCACAGTATACATTCACT...GTTTAGTAGCCAATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGATTGTCTTCAGGACATaGCACAGCCACTGCAAACGG | + |
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Preference number: 2 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKIVFRT*HSHCKR Trigger: CCGTTTGCAGTGGCTGTGCCATGTCCTGAAGACAAT...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGAGAAAACCTCTGAGATaGGTGAGTGGAAAGAATACA | + |
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Preference number: 2 (lower is better) Translates to: SSTPNSTDSCHSSVSPSERKPLR*VSGKNT Trigger: TGTATTCTTTCCACTCACTCATCTCAGAGGTTTTCT...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGTTAATAAGTGGTAGTTaGAAGCTTAGCCCTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSTPNSTDSCHSSVSPSELISGS*KLSPKQ Trigger: CTGCTTAGGGCTAAGCTTTCAACTACCACTTATTAA...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGACTAAACAACTCTGGTaGAGGAAGAGCTATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKTKQLW*RKSYVQ Trigger: CTGCACATAGCTCTTCCTTCACCAGAGTTGTTTAGT...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGTCCCTGCTGAGCTATTaGCTACTAAACAACTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKSLLSY*LLNNSG Trigger: ACCAGAGTTGTTTAGTAGCCAATAGCTCAGCAGGGA...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGAAAGAATACAACAGCTaGAAGTTACACAGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSTPNSTDSCHSSVSPSEKEYNS*KLHRKT Trigger: AGTTTTCCTGTGTAACTTCCAGCTGTTGTATTCTTT...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CAA 90 bp | TGGCTCTACTGGCTAATGGCTCTACTAGCTAATGGCTTTACAAGCTaGAGTAAACAATGCTACCAGCTGAAACTAAGTATTCAAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: WLYWLMALLANGFTS*SKQCYQLKLSIQTE Trigger: TTCTGTTTGAATACTTAGTTTCAGCTGGTAGCATTGTTTACTCAAGCTTGTAAAGCCATTAGCTAGTAGAGCCATTAGCCAGTAGAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGGGAGCAATGCTATTCAGCTATATAGGATATCTTCATTCTAACAACAGAGCACAGCCTTGTGAATaGAATCCATTGCTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLGAMLFSYIGYLHSNNRAQPCE*NPLLEQ Trigger: CTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGC...TCTGTTGTTAGAATGAAGATATCCTATATAGCTGAATAGCATTGCTCCCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATCTCTGACAAGACTCAGACTTATAACCATGCAATCTATATTAACTCTCTCTGTCTGATTCTTCCTTaGCCTCAAACTCAGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: LISDKTQTYNHAIYINSLCLILP*PQTQRS Trigger: GGATCTCTGAGTTTGAGGTCAAGGAAGAATCAGACA...GAGAGAGTTAATATAGATTGCATGGTTATAAGTCTGAGTCTTGTCAGAGATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR CAA 90 bp | GGTTTATGTCCATTCCAGCACAGCCTTGTGAATGAAATCCATTGCTaGAGCAGGACAAAGAACTTCATTAAACAGAACCAAATAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GLCPFQHSLVNEIHC*SRTKNFIKQNQIKS Trigger: AGATTTTATTTGGTTCTGTTTAATGAAGTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGCTGGAATGGACATAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGGGAGCAATGCTATTCAGCTATATAGGATATCTTCATTCTAACAACAGATCTGAGATGAGTGAGTaGAAAGAATACAACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLGAMLFSYIGYLHSNNRSEMSE*KEYNSW Trigger: CCAGCTGTTGTATTCTTTCCACTCACTCATCTCAGA...TCTGTTGTTAGAATGAAGATATCCTATATAGCTGAATAGCATTGCTCCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGGGAGCAATGCTATTCAGCTATATAGGATATCTTCATTCTAACAACAGAGTGAATGAAATCCATTaGTTGAGCAGGACAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLGAMLFSYIGYLHSNNRVNEIH*LSRTKN Trigger: GTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCAC...TCTGTTGTTAGAATGAAGATATCCTATATAGCTGAATAGCATTGCTCCCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTATGTAAAAATCAGACCTaGGTGGGAATGGATTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVCKNQT*VGMDLL Trigger: CAACAAATCCATTCCCACCCAGGTCTGATTTTTACA...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTGGCTACTAAACTGTCTGAGCAAAGGTTaGCATCTTGACACACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: ASHELGSDSSLLSYWLLNCLSKG*HLDTLQ Trigger: CTGCAGTGTGTCAAGATGCAAACCTTTGCTCAGACA...GTTTAGTAGCCAATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CCA 72 bp | CATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTaGCTACTAAACAACTCTGGTGAAGGAAGAGCTATG | + |
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Preference number: 3 (lower is better) Translates to: HELGSDSSLLSY*LLNNSGEGRAM Trigger: CATAGCTCTTCCTTCACCAGAGTTGTTTAGTAGCCAATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CCA 72 bp | ACTGATGGTGTCCTATTTTCTTCAGCAAGGCTCTACTaGCTAATGGCTCTACTGGCTAATGGCTCTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: TDGVLFSSARLY*LMALLANGSTG Trigger: GCCAGTAGAGCCATTAGCCAGTAGAGCCATTAGCCAGTAGAGCCTTGCTGAAGAAAATAGGACACCATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR TCA 72 bp | AACTCTGGTGAAGGAAGAGCTATGTGCAGCAGTTACTaGTCTAACAGTGAGGCCACCATGATCCAGTGGATA | + |
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Preference number: 3 (lower is better) Translates to: NSGEGRAMCSSY*SNSEATMIQWI Trigger: TATCCACTGGATCATGGTGGCCTCACTGTTAGATCAGTAACTGCTGCACATAGCTCTTCCTTCACCAGAGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CCA 72 bp | ATTTACGGGAGTAAGACTGTAACTTGGCTTACAGTTTaGAGGGCACATTCCATCATGGTGGGGAAGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: IYGSKTVTWLTV*RAHSIMVGKNG Trigger: GCCATTCTTCCCCACCATGATGGAATGTGCCCTCCAAACTGTAAGCCAAGTTACAGTCTTACTCCCGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR TCA 72 bp | TGTGCAGCAGTTACTGATCTAACAGTGAGGCCACCATaGTCCAGTGGATATGTGCATACCAGTGTTTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: CAAVTDLTVRPP*SSGYVHTSVSQ Trigger: TTGAGAAACACTGGTATGCACATATCCACTGGATCATGGTGGCCTCACTGTTAGATCAGTAACTGCTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CCA 72 bp | AAGAATACAACAGCTGGAAGTTACACAGGAAAACTATaGAACATTGTCTTCAGGACATGGCACAGCCACTGC | + |
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Preference number: 3 (lower is better) Translates to: KNTTAGSYTGKL*NIVFRTWHSHC Trigger: GCAGTGGCTGTGCCATGTCCTGAAGACAATGTTCCATAGTTTTCCTGTGTAACTTCCAGCTGTTGTATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGGAAAACTATGGAACATaGTCTTCAGGACATGGCACA | + |
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Preference number: 3 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKENYGT*SSGHGT Trigger: TGTGCCATGTCCTGAAGACAATGTTCCATAGTTTTC...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR TCA 72 bp | CTGTGGTTTATGTCCATTCCAGCACAGCCTTGTGAATaGAATCCATTGCTTGAGCAGGACAAAGAACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LWFMSIPAQPCE*NPLLEQDKELH Trigger: ATGAAGTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGCTGGAATGGACATAAACCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR GCA 72 bp | TGTCCATTCCAGCACAGCCTTGTGAATGAAATCCATTaGTTGAGCAGGACAAAGAACTTCATTAAACAGAAC | + |
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Preference number: 3 (lower is better) Translates to: CPFQHSLVNEIH*LSRTKNFIKQN Trigger: GTTCTGTTTAATGAAGTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGCTGGAATGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CCA 72 bp | AGCTTTCTTGGGGCTGGAAGATATCATAAAGACTGCTaGCACTCCCAACTATCAACTCTTAAAGAGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: SFLGAGRYHKDC*HSQLSTLKEKS Trigger: TGATTTCTCTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCCCAAGAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR TCA 72 bp | TCTGATTCTTCCTTGACCTCAAACTCAGAGATCCACTaGGACACTATAGTCAAGGAAACATATGTTTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: SDSSLTSNSEIH*DTIVKETYVLD Trigger: GTCCAAAACATATGTTTCCTTGACTATAGTGTCTCAGTGGATCTCTGAGTTTGAGGTCAAGGAAGAATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR TCA 72 bp | AAACTGCATTCTAAATCTCTCTGCAAGGAACAACAGTaGAGCAGAATCAGAACTGCTCAAGGTGTTAATAAG | + |
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Preference number: 3 (lower is better) Translates to: KLHSKSLCKEQQ*SRIRTAQGVNK Trigger: CTTATTAACACCTTGAGCAGTTCTGATTCTGCTTCACTGTTGTTCCTTGCAGAGAGATTTAGAATGCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR-3UTR CAA 90 bp | ATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGATGATAGTCAACCTTCTTaGTCTGATTCTTCCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: IIMKQKSIKEPSLAFEVDDSQPS*SDSSLT Trigger: GGTCAAGGAAGAATCAGACAAAGAAGGTTGACTATC...ATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR-3UTR CAA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGTGGGAATGGATTTGTaGCAAGATAATGCTAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVVGMDL*QDNASL Trigger: GAGACTAGCATTATCTTGCAACAAATCCATTCCCAC...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGATCGGGATCATTCCATTTaGTCACACATTTCAATGACC | + |
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Preference number: 3 (lower is better) Translates to: IIMKQKSIKEPSLAFEVDRDHSI*SHISMT Trigger: GGTCATTGAAATGTGTGACAAAATGGAATGATCCCG...ATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR TCA 72 bp | AAATCTCAATGGCTTCACGACCTTATTGTTAAACACTaGACCACTTTATTATTACTGTCTTTCTCCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: KSQWLHDLIVKH*TTLLLLSFSSA Trigger: GGCAGAGGAGAAAGACAGTAATAATAAAGTGGTTCAGTGTTTAACAATAAGGTCGTGAAGCCATTGAGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CCA 90 bp | GCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATTGGCTACTAAACGTTTGTCGCCAGGACTaGGACTCACGGCCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASHELGSDSSLLSYWLLNVCRQD*DSRPGC Trigger: GCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAAC...GTTTAGTAGCCAATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CCA 90 bp | ACATTGTCTTCAGGACATGGCACAGCCACTGCAAACGGCAGCTTGAGTCTTCTGTGTGCGGCCCGGGCTTaGGAGACTTGGACTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLSSGHGTATANGSLSLLCAARA*ETWTPA Trigger: TGCAGGAGTCCAAGTCTCCCAAGCCCGGGCCGCACA...CAGAAGACTCAAGCTGCCGTTTGCAGTGGCTGTGCCATGTCCTGAAGACAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGACTCCTGCACCTCCCTaGCCACCATCGACGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: SSTPNSTDSCHSSVSPSETPAPP*PPSTVP Trigger: CGGTACCGTCGATGGTGGTCAGGGAGGTGCAGGAGT...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CAA 72 bp | TCTTCAGGACATGGCACAGCCACTGCAAACGGCAGCTaGAGTCTTCTGCACTGGGCCTGTATACCACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSGHGTATANGS*SLLHWACIPLN Trigger: GTTCAGTGGTATACAGGCCCAGTGCAGAAGACTCAAGCTGCCGTTTGCAGTGGCTGTGCCATGTCCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR GCA 90 bp | CCAGATGAAGACAACTTACATTCAGATCCACGATATGGAGAAATCAAGCTAGAAAGCGGCGACAGCGTGTaGGGCCCGGGCTTGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PDEDNLHSDPRYGEIKLESGDSV*GPGLGD Trigger: GTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCT...TTCTAGCTTGATTTCTCCATATCGTGGATCTGAATGTAAGTTGTCTTCATCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGACGGTCAGGGCCCGCTaGGTCATGGGTTTGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKTVRAR*VMGLSP Trigger: TGGCGACAAACCCATGACCCAGCGGGCCCTGACCGT...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR GCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAAGCGGCGACAGCGTGTaGGGCCCGGGCTTGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVSGDSV*GPGLGD Trigger: GTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCT...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGGGCCCGCTGGGTCATaGGTTTGTCGCCAGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVGPAGS*VCRQDW Trigger: CCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCC...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR TCA 90 bp | ATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGATACTCCTGCACCTCCCTaGCCACCATCGACGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: IIMKQKSIKEPSLAFEVDTPAPP*PPSTVP Trigger: CGGTACCGTCGATGGTGGTCAGGGAGGTGCAGGAGT...ATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTATGTGCGGCCCGGGCTTaGGAGACTTGGACTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVCAARA*ETWTPA Trigger: TGCAGGAGTCCAAGTCTCCCAAGCCCGGGCCGCACA...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CCA 90 bp | TTGATCTCTGACAAGACTCAGACTTATAACCATGCAATCTATATTAACTCTCTCGTTTGTCGCCAGGACTaGGACTCACGGCCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LISDKTQTYNHAIYINSLVCRQD*DSRPGC Trigger: GCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAAC...GAGAGAGTTAATATAGATTGCATGGTTATAAGTCTGAGTCTTGTCAGAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAACGGTCAGGGCCCGCTaGGTCATGGGTTTGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVTVRAR*VMGLSP Trigger: TGGCGACAAACCCATGACCCAGCGGGCCCTGACCGT...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR GCA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGTCATCCTCATCGTCTTaGTCTAAAGGTGTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKSSSSS*SKGVNS Trigger: GGAATTGACACCTTTAGAGCAAGACGATGAGGATGA...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CAA 72 bp | TTTCTCATTCTGAGAGGAGATTTTATTGTGGCCTTGTaGAATGAGAGTAGCCTCAAGGTTGGCTTTAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: FLILRGDFIVAL*NESSLKVGFSQ Trigger: CTGACTAAAGCCAACCTTGAGGCTACTCTCATTCAACAAGGCCACAATAAAATCTCCTCTCAGAATGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| 3UTR CAA 72 bp | CCATTCCAGCACAGCCTTGTGAATGAAATCCATTGCTaGAGCAGGACAAAGAACTTCATTAAACAGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: PFQHSLVNEIHC*SRTKNFIKQNQ Trigger: TTGGTTCTGTTTAATGAAGTTCTTTGTCCTGCTCAAGCAATGGATTTCATTCACAAGGCTGTGCTGGAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| 3UTR CAA 72 bp | TGGCTAATGGCTCTACTAGCTAATGGCTTTACAAGCTaGAGTAAACAATGCTACCAGCTGAAACTAAGTATT | + |
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Preference number: 4 (lower is better) Translates to: WLMALLANGFTS*SKQCYQLKLSI Trigger: AATACTTAGTTTCAGCTGGTAGCATTGTTTACTCAAGCTTGTAAAGCCATTAGCTAGTAGAGCCATTAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR GCA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTATCATCCTCATCGTCTTaGTCTAAAGGTGTCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVSSSSS*SKGVNS Trigger: GGAATTGACACCTTTAGAGCAAGACGATGAGGATGA...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS TCA 90 bp | CTGTCATTGCGGCTCTCCGCGCCTGGCAGCCCGGCAGCATCAGACTaGGCTTGGCCCCGAGGCTGGGCCGCGGTGGGGCCCGGAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LSLRLSAPGSPAASD*AWPRGWAAVGPGGS Trigger: GCTTCCTCCGGGCCCCACCGCGGCCCAGCCTCGGGGCCAAGCTCAGTCTGATGCTGCCGGGCTGCCAGGCGCGGAGAGCCGCAATGACAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 90 bp | CCGCGGCGCTCACCACCACCAACACGGTCAGGGCCCGCTGGGTCATaGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGCTGCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRSPPPTRSGPAGS*VCRQDWDSRPGCHP Trigger: AGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGGTGGTGGTGAGCGCCGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 90 bp | ACCAGCACCGCGGCGCTCACCACCACCAACACGGTCAGGGCCCGCTaGGTCATGGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSTAALTTTNTVRAR*VMGLSPGLGLTARL Trigger: CAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGGTGGTGGTGAGCGCCGCGGTGCTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS GCA 90 bp | GCTGGGTCATGGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGCTaGCACCCTGGGAACCTTCTCCGGCCTTCCCTTCGAGGCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSWVCRQDWDSRPG*HPGNLLRPSLRGRP Trigger: CGGACGGCCTCGAAGGGAAGGCCGGAGAAGGTTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 90 bp | CCAACACGGTCAGGGCCCGCTGGGTCATGGGTTTGTCGCCAGGACTaGGACTCACGGCCAGGCTGCCACCCTGGGAACCTTCTCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTRSGPAGSWVCRQD*DSRPGCHPGNLLRP Trigger: AGGCCGGAGAAGGTTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 90 bp | ATGGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGCTGCCACCCTaGGAACCTTCTCCGGCCTTCCCTTCGAGGCCGTCCGCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MGLSPGLGLTARLPP*EPSPAFPSRPSASD Trigger: GTCTGAGGCGGACGGCCTCGAAGGGAAGGCCGGAGAAGGTTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | AACCTGTCCATAGCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATAGCATCAGACTGAGCTaGGCCCCGAGGCTGGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: NLSIASHELGSDSSLLSYSIRLS*APRLGR Trigger: GCGGCCCAGCCTCGGGGCCAAGCTCAGTCTGATGCT...ATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGCTATGGACAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGGAAGATATCATAAAGACTGCTGGCACTCCCAACTATCAACTCTTAAAGCCGGGCTTGGGAGACTaGGACTCCTGCACCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLEDIIKTAGTPNYQLLKPGLGD*DSCTSL Trigger: CAGGGAGGTGCAGGAGTCCAAGTCTCCCAAGCCCGG...CTTTAAGAGTTGATAGTTGGGAGTGCCAGCAGTCTTTATGATATCTTCCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTCTGACAAGACTCAGACTTATAACCATGCAATCTATATTAACTCTCTCCCGGGGATGCTGTCATaGCGGCTCTCCGCGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LISDKTQTYNHAIYINSLPGMLS*RLSAPG Trigger: GCCAGGCGCGGAGAGCCGCAATGACAGCATCCCCGG...GAGAGAGTTAATATAGATTGCATGGTTATAAGTCTGAGTCTTGTCAGAGATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTACACCAAACAGTACAGACTCCTGCCATTCCTCTGTTAGCCCATCAGAGCCGTACCTCCTAGTCTaGCGGTTTCTTCTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: SSTPNSTDSCHSSVSPSEPYLLV*RFLLLI Trigger: GATGAGAAGAAGAAACCGCAAGACTAGGAGGTACGG...CTCTGATGGGCTAACAGAGGAATGGCAGGAGTCTGTACTGTTTGGTGTACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAAGCATCAGACTGAGCTaGGCCCCGAGGCTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVSIRLS*APRLGR Trigger: GCGGCCCAGCCTCGGGGCCAAGCTCAGTCTGATGCT...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CAA 90 bp | AACCTGTCCATAGCCAGTCATGAACTGGGGTCTGACTCCTCCCTGCTGAGCTATGCATCAAACAATGTGTaGTCATCATCCTCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLSIASHELGSDSSLLSYASNNV*SSSSSS Trigger: AGACGATGAGGATGATGACAACACATTGTTTGATGC...ATAGCTCAGCAGGGAGGAGTCAGACCCCAGTTCATGACTGGCTATGGACAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTACCGGGCTTGGGAGACTaGGACTCCTGCACCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVPGLGD*DSCTSL Trigger: CAGGGAGGTGCAGGAGTCCAAGTCTCCCAAGCCCGG...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CAA 90 bp | ATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGATCGCTGGGTCATGGGTTaGTCGCCAGGACTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: IIMKQKSIKEPSLAFEVDRWVMG*SPGLGL Trigger: GAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCG...ATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGGGAGCAATGCTATTCAGCTATATAGGATATCTTCATTCTAACAACAGACGCTGGGTCATGGGTTaGTCGCCAGGACTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGAMLFSYIGYLHSNNRRWVMG*SPGLGL Trigger: GAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCG...TCTGTTGTTAGAATGAAGATATCCTATATAGCTGAATAGCATTGCTCCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186780.2 |
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| CDS-3UTR CAA 90 bp | ATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGATCCGTACCTCCTAGTCTaGCGGTTTCTTCTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IIMKQKSIKEPSLAFEVDPYLLV*RFLLLI Trigger: GATGAGAAGAAGAAACCGCAAGACTAGGAGGTACGG...ATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS-3UTR CAA 90 bp | TTCATCATCATGAAGCAGAAGTCTATAAAAGAGCCAAGTTTAGCTTTTGAGGTAGCATCAAACAATGTGTaGTCATCATCCTCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIIMKQKSIKEPSLAFEVASNNV*SSSSSS Trigger: AGACGATGAGGATGATGACAACACATTGTTTGATGC...TACCTCAAAAGCTAAACTTGGCTCTTTTATAGACTTCTGCTTCATGATGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059975.8 |
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| CDS TCA 72 bp | CGGCTCTCCGCGCCTGGCAGCCCGGCAGCATCAGACTaGGCTTGGCCCCGAGGCTGGGCCGCGGTGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RLSAPGSPAASD*AWPRGWAAVGP Trigger: GGGCCCCACCGCGGCCCAGCCTCGGGGCCAAGCTCAGTCTGATGCTGCCGGGCTGCCAGGCGCGGAGAGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CAA 90 bp | CCCGGAGGAAGCGGCGACAGCGTGTGCGGCCCGGGCTTGGGAGACTaGGACTCCTGCACCTCCCTGACCACCATCGACGGTACCGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGGSGDSVCGPGLGD*DSCTSLTTIDGTAP Trigger: CGGGGCGGTACCGTCGATGGTGGTCAGGGAGGTGCAGGAGTCCAAGTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCTTCCTCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CAA 90 bp | GCGGTGGGGCCCGGAGGAAGCGGCGACAGCGTGTGCGGCCCGGGCTaGGGAGACTTGGACTCCTGCACCTCCCTGACCACCATCGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVGPGGSGDSVCGPG*GDLDSCTSLTTIDG Trigger: ACCGTCGATGGTGGTCAGGGAGGTGCAGGAGTCCAAGTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCTTCCTCCGGGCCCCACCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CAA 90 bp | GCGCTCACCACCACCAACACGGTCAGGGCCCGCTGGGTCATGGGTTaGTCGCCAGGACTGGGACTCACGGCCAGGCTGCCACCCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALTTTNTVRARWVMG*SPGLGLTARLPPWE Trigger: TTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGGTGGTGGTGAGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CAA 72 bp | AGCGGCGACAGCGTGTGCGGCCCGGGCTTGGGAGACTaGGACTCCTGCACCTCCCTGACCACCATCGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGDSVCGPGLGD*DSCTSLTTIDG Trigger: ACCGTCGATGGTGGTCAGGGAGGTGCAGGAGTCCAAGTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 72 bp | TCAGGGCCCGCTGGGTCATGGGTTTGTCGCCAGGACTaGGACTCACGGCCAGGCTGCCACCCTGGGAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGPAGSWVCRQD*DSRPGCHPGNL Trigger: AAGGTTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CCA 72 bp | TCACCACCACCAACACGGTCAGGGCCCGCTGGGTCATaGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPPPTRSGPAGS*VCRQDWDSRPG Trigger: GCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGGTGGTGGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS GCA 72 bp | TGGGTTTGTCGCCAGGACTGGGACTCACGGCCAGGCTaGCACCCTGGGAACCTTCTCCGGCCTTCCCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WVCRQDWDSRPG*HPGNLLRPSLR Trigger: TCGAAGGGAAGGCCGGAGAAGGTTCCCAGGGTGGCAGCCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS CAA 72 bp | TCTATGTTCGTATCCAAAACACCGTACCTCCTAGTCTaGCGGTTTCTTCTTCTCATCCTGACGGTCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SMFVSKTPYLLV*RFLLLILTVLT Trigger: GGTCAGGACCGTCAGGATGAGAAGAAGAAACCGCAAGACTAGGAGGTACGGTGTTTTGGATACGAACATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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| CDS GCA 72 bp | GCATCAAACAATGTGTTGTCATCATCCTCATCGTCTTaGTCTAAAGGTGTCAATTCCATGTTCTCTATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASNNVLSSSSSS*SKGVNSMFSMF Trigger: GAACATAGAGAACATGGAATTGACACCTTTAGAGCAAGACGATGAGGATGATGACAACACATTGTTTGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059975.8 ENSMUST00000186780.2 |
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