Pregenerated sensors for FAM170A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035420Ensembl transcript IDs: ENSMUST00000039121.4, ENSMUST00000236949.2, ENSMUST00000238078.2, ENSMUST00000238113.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACCTAAAGCCATTCTCCATGGTCACGAGCCAGTCAGGTGTCTTTaGCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: TPKAILHGHEPVRCL*PWSLFNRGRPWWAV Trigger: GACAGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATGGAGAATGGCTTTAGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR TCA 90 bp | TGCCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCTGTCTaGCTCTGGTTTTTCCTCATGTTCTTTCTCTTCCCCAATGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: CPWSLFNRGRPWWAV*LWFFLMFFLFPNGF Trigger: GAACCCATTGGGGAAGAGAAAGAACATGAGGAAAAACCAGAGTCAGACAGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR GCA 90 bp | CCTACCCACACACCCTCAGGAAGGGTGGCTTCTTCCATCCTTGGCTaGTTTTCTAGGGACTCTGAGGTTTCCTTTGTGTCCCAGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: PTHTPSGRVASSILG*FSRDSEVSFVSQEM Trigger: CATCTCCTGGGACACAAAGGAAACCTCAGAGTCCCTAGAAAAGCAGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTGTGTGGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 90 bp | CTTTCTCTTCCCCAATGGGTTCACTGTCCGACAGGAGGTTTCTGGTaGACACATCAGAGGGTGGAGTACCTACCCACACACCCTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LSLPQWVHCPTGGFW*THQRVEYLPTHPQE Trigger: TTCCTGAGGGTGTGTGGGTAGGTACTCCACCCTCTGATGTGTCCACCAGAAACCTCCTGTCGGACAGTGAACCCATTGGGGAAGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 90 bp | GTTCTTTCTCTTCCCCAATGGGTTCACTGTCCGACAGGAGGTTTCTaGTGGACACATCAGAGGGTGGAGTACCTACCCACACACCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: VLSLPQWVHCPTGGF*WTHQRVEYLPTHPQ Trigger: CTGAGGGTGTGTGGGTAGGTACTCCACCCTCTGATGTGTCCACCAGAAACCTCCTGTCGGACAGTGAACCCATTGGGGAAGAGAAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 90 bp | ACACATCAGAGGGTGGAGTACCTACCCACACACCCTCAGGAAGGGTaGCTTCTTCCATCCTTGGCTGCTTTTCTAGGGACTCTGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: THQRVEYLPTHPQEG*LLPSLAAFLGTLRF Trigger: AAACCTCAGAGTCCCTAGAAAAGCAGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTGTGTGGGTAGGTACTCCACCCTCTGATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR GCA 90 bp | CGGAGTGTTGTTCTCGTCTTCCTTTGTACTACTGGCATTGTCAGCTaGCGCTGTTGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RSVVLVFLCTTGIVS*RCCRNGPFFFFCPL Trigger: CAAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAATGCCAGTAGTACAAAGGAAGACGAGAACAACACTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTTGGGTTTCTCGGTTTCCTCGGTGTGGTCCTCTTCCTCCTCCTGGGTGAGGTGTCTTTGCCCTTaGTCTCTCTTCAACCGCGGG | + |
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Preference number: 2 (lower is better) Translates to: SSLGFSVSSVWSSSSSWVRCLCP*SLFNRG Trigger: CCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCT...CACCCAGGAGGAGGAAGAGGACCACACCGAGGAAACCGAGAAACCCAAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACCGCGGGAGACCCTGGTGGGCTGTCTGACTCTGGTTTTTCCTCATGTTCTCACCCTCAGGAAGGGTaGCTTCTTCCATCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: STAGDPGGLSDSGFSSCSHPQEG*LLPSLA Trigger: AGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTG...AGAACATGAGGAAAAACCAGAGTCAGACAGCCCACCAGGGTCTCCCGCGGTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGCCATACACCTAAAGCCATTCTCCATGGTCACGAGCCAGTCAGGTGTCCCGACAGGAGGTTTCTaGTGGACACATCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QQAIHLKPFSMVTSQSGVPTGGF*WTHQRV Trigger: CACCCTCTGATGTGTCCACCAGAAACCTCCTGTCGG...GACACCTGACTGGCTCGTGACCATGGAGAATGGCTTTAGGTGTATGGCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGCAGGCCATACACCTAAAGCCATTCTCCATGGTCACGAGCCAGTCAGGCTTTCTCTTCCCCAATaGGTTCACTGTCCGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PAAGHTPKAILHGHEPVRLSLPQ*VHCPTG Trigger: TCCTGTCGGACAGTGAACCCATTGGGGAAGAGAAAG...CCTGACTGGCTCGTGACCATGGAGAATGGCTTTAGGTGTATGGCCTGCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCCTTGGGTTTCTCGGTTTCCTCGGTGTGGTCCTCTTCCTCCTCCTGGGCTTTCTCTTCCCCAATaGGTTCACTGTCCGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLPWVSRFPRCGPLPPPGLSLPQ*VHCPTG Trigger: TCCTGTCGGACAGTGAACCCATTGGGGAAGAGAAAG...CCCAGGAGGAGGAAGAGGACCACACCGAGGAAACCGAGAAACCCAAGGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAAGGGCCACCCCATCTTGCATGTTCTTCTGACCCAGGAATCTCAGTTGCCGACAGGAGGTTTCTaGTGGACACATCAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PRKGHPILHVLLTQESQLPTGGF*WTHQRV Trigger: CACCCTCTGATGTGTCCACCAGAAACCTCCTGTCGG...CAACTGAGATTCCTGGGTCAGAAGAACATGCAAGATGGGGTGGCCCTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAACGACATCTTCCTCTGTaGGCTGCTGCTCCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IVSCRCCRNGPFFFLSQERHLPL*AAAPQP Trigger: AGGCTGAGGAGCAGCAGCCCACAGAGGAAGATGTCG...TTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR TCA 90 bp | GAATCAAACACACAGCCTGGACATTGGCTCCAGGGTTTCTTCATGCCGACATCTCCCTGGTGGGCTGTCTaGCTCTGGTTTTTCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: ESNTQPGHWLQGFFMPTSPWWAV*LWFFLM Trigger: CATGAGGAAAAACCAGAGTCAGACAGCCCACCAGGG...AGATGTCGGCATGAAGAAACCCTGGAGCCAATGTCCAGGCTGTGTGTTTGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCTTCTTCCTCTCCCAAGAAAGGGCCACCCCATCTTGCATGTTCTTCTGCACCCTCAGGAAGGGTaGCTTCTTCCATCCTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLPLPRKGHPILHVLLHPQEG*LLPSLA Trigger: AGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTG...CAGAAGAACATGCAAGATGGGGTGGCCCTTTCTTGGGAGAGGAAGAAGAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR CAA 90 bp | TGTTCTCGTCTTCCTTTGTACTACTGGCATTGTCAGCTGCCGCTGTaGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAAAGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: CSRLPLYYWHCQLPL*SQWSFLLPLPRKGH Trigger: GTGGCCCTTTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAATGCCAGTAGTACAAAGGAAGACGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAAATGCTGCCAATCAGCTaGGCCATGGTGAGATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IVSCRCCRNGPFFFLSQEMLPIS*AMVRWK Trigger: CTTCCATCTCACCATGGCTCAGCTGATTGGCAGCAT...TTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTTGGAACAGGAGGTTTCTGGTaGACACATCAGAGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CQLPLLSQWSFLLLLSFGTGGFW*THQRVE Trigger: CTCCACCCTCTGATGTGTCCACCAGAAACCTCCTGT...TCCAAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCTTTGCCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCTGTCTGAAAACAAGCTTTATTaGGTAGGATGTTTATGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GVFALGLSSTAGDPGGLSENKLY*VGCLCV Trigger: GACACATAAACATCCTACGCAATAAAGCTTGTTTTC...AGACAGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTTGGATCTCTGATTCCATGCTaGCAATCAGCTGAGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: CQLPLLSQWSFLLLLSFGSLIPC*QSAEPW Trigger: CCATGGCTCAGCTGATTGGCAGCATGGAATCAGAGA...TCCAAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| 3UTR-3UTR GCA 90 bp | GAATCAAACACACAGCCTGGACATTGGCTCCAGGGTTTCTTCATGCCGACATCTTGCTCTCTGATTCCATaGTGCCAATCAGCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ESNTQPGHWLQGFFMPTSCSLIP*CQSAEP Trigger: TGGCTCAGCTGATTGGCAGCATGGAATCAGAGAGCA...AGATGTCGGCATGAAGAAACCCTGGAGCCAATGTCCAGGCTGTGTGTTTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 72 bp | CTCCATGGTCACGAGCCAGTCAGGTGTCTTTGCCCTTaGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LHGHEPVRCLCP*SLFNRGRPWWA Trigger: AGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR GCA 72 bp | GCCATTCTCCATGGTCACGAGCCAGTCAGGTGTCTTTaGCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AILHGHEPVRCL*PWSLFNRGRPW Trigger: CCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATGGAGAATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTTTGCCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCTGTCTTGGCTTCTTCCATCCTaGGCTGCTTTTCTAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: GVFALGLSSTAGDPGGLSWLLPS*AAFLGT Trigger: AGTCCCTAGAAAAGCAGCCAAGGATGGAAGAAGCCA...AGACAGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR GCA 72 bp | TGGCAGCTGAAGCCTTCCCTGATCCCATACTGCACATaGTCTTGGAGGCTTTCCATGGTGGCGAAGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: WQLKPSLIPYCT*SWRLSMVAKTL Trigger: CAGGGTCTTCGCCACCATGGAAAGCCTCCAAGAGCATGTGCAGTATGGGATCAGGGAAGGCTTCAGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 72 bp | AGGGTGGAGTACCTACCCACACACCCTCAGGAAGGGTaGCTTCTTCCATCCTTGGCTGCTTTTCTAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: RVEYLPTHPQEG*LLPSLAAFLGT Trigger: AGTCCCTAGAAAAGCAGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTGTGTGGGTAGGTACTCCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CCA 72 bp | CTTCCCCAATGGGTTCACTGTCCGACAGGAGGTTTCTaGTGGACACATCAGAGGGTGGAGTACCTACCCACA | + |
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Preference number: 3 (lower is better) Translates to: LPQWVHCPTGGF*WTHQRVEYLPT Trigger: TGTGGGTAGGTACTCCACCCTCTGATGTGTCCACCAGAAACCTCCTGTCGGACAGTGAACCCATTGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCATTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCGCCAGTCAGGTGTCTTaGCCCTTGGTCTCTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: TGIVSCRCCRNGPFFFLSASQVS*PLVSLQ Trigger: TTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGC...GGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAATGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTTGGAGTCAGCCTTCTCTTCCTaGGGTTTCTCGGTTTCCTCG | + |
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Preference number: 3 (lower is better) Translates to: VSCRCCRNGPFFFFCPLESAFSS*GFSVSS Trigger: CGAGGAAACCGAGAAACCCAAGGAAGAGAAGGCTGA...CTCCAAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAAAACTCTGAGGTTTCCTTaGTGTCCCAGGAGATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LSAAAVVAMVLSSSSPKKTLRFP*CPRRWP Trigger: TGGCCATCTCCTGGGACACAAAGGAAACCTCAGAGT...TTTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAAAATCCCCCTCTCCTCTTaGTTCATACACAGAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LSAAAVVAMVLSSSSPKKIPLSS*FIHRED Trigger: GTCCTCTCTGTGTATGAACAAAGAGGAGAGGGGGAT...TTTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGAATGGCTTCTTCCATCCTaGGCTGCTTTTCTAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: IVSCRCCRNGPFFFLSQEWLLPS*AAFLGT Trigger: AGTCCCTAGAAAAGCAGCCAAGGATGGAAGAAGCCA...TTCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCATGTTCTTTCTCTTCCCCAATGGGTTCACTGTCCGACAGGAGGTTTCATCCCCCTCTCCTCTTaGTTCATACACAGAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FPHVLSLPQWVHCPTGGFIPLSS*FIHRED Trigger: GTCCTCTCTGTGTATGAACAAAGAGGAGAGGGGGAT...GAAACCTCCTGTCGGACAGTGAACCCATTGGGGAAGAGAAAGAACATGAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CAA 72 bp | TCTCCATGGTCACGAGCCAGTCAGGTGTCTTTGCCCTaGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SPWSRASQVSLP*VSLQPRETLVG Trigger: GCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CAA 72 bp | AGCCATTCTCCATGGTCACGAGCCAGTCAGGTGTCTTaGCCCTTGGTCTCTCTTCAACCGCGGGAGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: SHSPWSRASQVS*PLVSLQPRETL Trigger: CAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATGGAGAATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR TCA 90 bp | GGTGTCTTTGCCCTTGGTCTCTCTTCAACCGCGGGAGACCCTGGTGGGCTGTCTCCAGTGGATTCAGGATaGGAGATATCCTCTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GVFALGLSSTAGDPGGLSPVDSG*EISSCD Trigger: GTCACAAGAGGATATCTCTCATCCTGAATCCACTGG...AGACAGCCCACCAGGGTCTCCCGCGGTTGAAGAGAGACCAAGGGCAAAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR TCA 90 bp | TCCCATACTGCACATGCTCTTGGAGGCTTTCCATGGTGGCGAAGACCCTGCAGCCCAGTGGATTCAGGATaGGAGATATCCTCTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SHTAHALGGFPWWRRPCSPVDSG*EISSCD Trigger: GTCACAAGAGGATATCTCTCATCCTGAATCCACTGG...GCTGCAGGGTCTTCGCCACCATGGAAAGCCTCCAAGAGCATGTGCAGTATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR TCA 90 bp | TGGACACATCAGAGGGTGGAGTACCTACCCACACACCCTCAGGAAGGGTGGCTTAATTCCAGCTTCCTTTaGCTCTTCAATTTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: WTHQRVEYLPTHPQEGWLNSSFL*LFNFQM Trigger: CATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATT...AAGCCACCCTTCCTGAGGGTGTGTGGGTAGGTACTCCACCCTCTGATGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| 3UTR CAA 72 bp | CTTCCTTTGTACTACTGGCATTGTCAGCTGCCGCTGTaGTCGCAATGGTCCTTTCTTCTTCCTCTCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPLYYWHCQLPL*SQWSFLLPLPR Trigger: TCTTGGGAGAGGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAATGCCAGTAGTACAAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAGGGCCACCCCATCTTGCATGTTCTTCTGACCCAGGAATCTCAGTTGAATTCCAGCTTCCTTTaGCTCTTCAATTTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PRKGHPILHVLLTQESQLNSSFL*LFNFQM Trigger: CATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATT...CAACTGAGATTCCTGGGTCAGAAGAACATGCAAGATGGGGTGGCCCTTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| 3UTR CAA 72 bp | CTTCCTTTGTACTACTGGCATTGTCAGCTGCCGCTGTaGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LPLYYWHCQLPL*SQWSFLLLLSF Trigger: AAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAATGCCAGTAGTACAAAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| 3UTR CAA 72 bp | CCCATCTTGCATGTTCTTCTGACCCAGGAATCTCAGTaGAGTCGTGTAAGATTCTTCTGTCCTTTGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PILHVLLTQESQ*SRVRFFCPLEN Trigger: ATTCTCCAAAGGACAGAAGAATCTTACACGACTCAACTGAGATTCCTGGGTCAGAAGAACATGCAAGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238113.2 |
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| CDS-3UTR CAA 90 bp | TCAACCGCGGGAGACCCTGGTGGGCTGTCTGACTCTGGTTTTTCCTCATGTTCTCCTGGGCTCTGGGCTTaGGGCACTCCAGTGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: STAGDPGGLSDSGFSSCSPGLWA*GTPVDS Trigger: TGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGG...AGAACATGAGGAAAAACCAGAGTCAGACAGCCCACCAGGGTCTCCCGCGGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS TCA 90 bp | GAGGCCTGTTGTGAGGGGGCAGTAGTCGCCTCTCCTTCCGGAACCTaGTCTAGTGGTGATCTAGGCTTGGAACTGTCCTGTAGCAATTTC | + |
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Preference number: 5 (lower is better) Translates to: EACCEGAVVASPSGT*SSGDLGLELSCSNF Trigger: GAAATTGCTACAGGACAGTTCCAAGCCTAGATCACCACTAGATCAGGTTCCGGAAGGAGAGGCGACTACTGCCCCCTCACAACAGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CCA 90 bp | AGGAGACCTCCCCTACCCCTGGGCTCTGGGCTTTGGGCACTCCAGTaGATTCAGGATGAGAGATATCCTCTTGTGACTTTGAAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRPPLPLGSGLWALQ*IQDERYPLVTLKFQ Trigger: CTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGTAGGGGAGGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CCA 90 bp | GAACTGTCCTGTAGCAATTTCCAGGTTCCCCTGGGCTCTGGGCTTTaGGCACTCCAGTGGATTCAGGATGAGAGATATCCTCTTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: ELSCSNFQVPLGSGL*ALQWIQDERYPLVT Trigger: AGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGAACCTGGAAATTGCTACAGGACAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS CCA 90 bp | AGCAATTTCCAGGTTCCCCTGGGCTCTGGGCTTTGGGCACTCCAGTaGATTCAGGATGAGAGATATCCTCTTGTGACTTTGAAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SNFQVPLGSGLWALQ*IQDERYPLVTLKFQ Trigger: CTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGAACCTGGAAATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR CAA 90 bp | GTGGAGTACCTACCCACACACCCTCAGGAAGGGTGGCTTCTTCCATCCTTGGCTAAATTCCAGCTTCCTTaGACTCTTCAATTTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VEYLPTHPQEGWLLPSLAKFQLP*TLQFPD Trigger: ATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATTT...AGCCAAGGATGGAAGAAGCCACCCTTCCTGAGGGTGTGTGGGTAGGTACTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR CAA 90 bp | ATTGTCAGCTGCCGCTGTTGTCGCAATGGTCCTTTCTTCTTCTTCTGTCCTTTGTATCCTCTTGTGACTTaGAAATTCCAGCTTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: IVSCRCCRNGPFFFFCPLYPLVT*KFQLPL Trigger: CAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATA...CAAAGGACAGAAGAAGAAGAAAGGACCATTGCGACAACAGCGGCAGCTGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236949.2 |
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| CDS-3UTR CAA 90 bp | AGAGAGGACACACAAGTCTTATACGATGGACAGGATGAAGAGGCCTGTTGTGAGTATCCTCTTGTGACTTaGAAATTCCAGCTTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: REDTQVLYDGQDEEACCEYPLVT*KFQLPL Trigger: CAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATA...CTCACAACAGGCCTCTTCATCCTGTCCATCGTATAAGACTTGTGTGTCCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS-3UTR CAA 90 bp | AGAGAGGACACACAAGTCTTATACGATGGACAGGATGAAGAGGCCTGTTGTGAGAAATTCCAGCTTCCTTaGACTCTTCAATTTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: REDTQVLYDGQDEEACCEKFQLP*TLQFPD Trigger: ATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATTT...CTCACAACAGGCCTCTTCATCCTGTCCATCGTATAAGACTTGTGTGTCCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS CCA 72 bp | GCTTGGAACTGTCCTGTAGCAATTTCCAGGTTCCCCTaGGCTCTGGGCTTTGGGCACTCCAGTGGATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AWNCPVAISRFP*ALGFGHSSGFR Trigger: CCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGAACCTGGAAATTGCTACAGGACAGTTCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS CCA 72 bp | CCCCTACCCCTGGGCTCTGGGCTTTGGGCACTCCAGTaGATTCAGGATGAGAGATATCCTCTTGTGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLPLGSGLWALQ*IQDERYPLVTL Trigger: CAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CCA 72 bp | TGTAGCAATTTCCAGGTTCCCCTGGGCTCTGGGCTTTaGGCACTCCAGTGGATTCAGGATGAGAGATATCCT | + |
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Preference number: 6 (lower is better) Translates to: CSNFQVPLGSGL*ALQWIQDERYP Trigger: AGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCCAGGGGAACCTGGAAATTGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236949.2 ENSMUST00000238113.2 |
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| CDS TCA 72 bp | GGGCTCTGGGCTTTGGGCACTCCAGTGGATTCAGGATaGGAGATATCCTCTTGTGACTTTGAAATTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLWALGTPVDSG*EISSCDFEIPA Trigger: AGCTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCAAAGCCCAGAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039121.4 ENSMUST00000236949.2 ENSMUST00000238078.2 ENSMUST00000238113.2 |
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| CDS CCA 72 bp | TTTCCAGGTTCCCTTACTACGATGGATGAGCTTTTGTaGAGAAGAAACACAGGAGAAGTATTCGGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FPGSLTTMDELL*RRNTGEVFGGR Trigger: TCTGCCTCCGAATACTTCTCCTGTGTTTCTTCTCCACAAAAGCTCATCCATCGTAGTAAGGGAACCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CCA 72 bp | CTGTCCTGTAGCAATTTCCAGGTTCCCTTACTACGATaGATGAGCTTTTGTGGAGAAGAAACACAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSCSNFQVPLLR*MSFCGEETQEK Trigger: CTTCTCCTGTGTTTCTTCTCCACAAAAGCTCATCCATCGTAGTAAGGGAACCTGGAAATTGCTACAGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CAA 90 bp | TGGGCACTCCAGTGGATTCAGGATGAGAGATATCCTCTTGTGACTTaGAAATTCCAGCTTCCTTTGACTCTTCAATTTCCAGATGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WALQWIQDERYPLVT*KFQLPLTLQFPDVS Trigger: GGAAACATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTGGAGTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039121.4 ENSMUST00000236949.2 ENSMUST00000238078.2 ENSMUST00000238113.2 |
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| CDS TCA 72 bp | CCTGTAGCAATTTCCAGGTTCCCTTACTACGATGGATaGGCTTTTGTGGAGAAGAAACACAGGAGAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: PVAISRFPYYDG*AFVEKKHRRSI Trigger: AATACTTCTCCTGTGTTTCTTCTCCACAAAAGCTCATCCATCGTAGTAAGGGAACCTGGAAATTGCTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039121.4 ENSMUST00000238078.2 |
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| CDS CAA 90 bp | CAGGATGAGAGATATCCTCTTGTGACTTTGAAATTCCAGCTTCCTTaGACTCTTCAATTTCCAGATGTTTCCTCTTTTGTCGCCGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QDERYPLVTLKFQLP*TLQFPDVSSFVAVS Trigger: TGAAACGGCGACAAAAGAGGAAACATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039121.4 ENSMUST00000236949.2 ENSMUST00000238078.2 ENSMUST00000238113.2 |
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| CDS CAA 72 bp | CAGTGGATTCAGGATGAGAGATATCCTCTTGTGACTTaGAAATTCCAGCTTCCTTTGACTCTTCAATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QWIQDERYPLVT*KFQLPLTLQFP Trigger: TGGAAATTGAAGAGTCAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATATCTCTCATCCTGAATCCACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039121.4 ENSMUST00000236949.2 ENSMUST00000238078.2 ENSMUST00000238113.2 |
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| CDS CAA 72 bp | AGATATCCTCTTGTGACTTTGAAATTCCAGCTTCCTTaGACTCTTCAATTTCCAGATGTTTCCTCTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RYPLVTLKFQLP*TLQFPDVSSFV Trigger: GACAAAAGAGGAAACATCTGGAAATTGAAGAGTCAAAGGAAGCTGGAATTTCAAAGTCACAAGAGGATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039121.4 ENSMUST00000236949.2 ENSMUST00000238078.2 ENSMUST00000238113.2 |
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