Pregenerated sensors for FAM163B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009216Ensembl transcript IDs: ENSMUST00000151224.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGGAAGACTGACTGAGCAGAGGTCTGGAGTTGGGGCCAGGGTGTaGCGTGGGTATCCTGTCATGACCTCAGGACCCAGGGCTGGGCGC | + |
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Preference number: 1 (lower is better) Translates to: RGRLTEQRSGVGARV*RGYPVMTSGPRAGR Trigger: GCGCCCAGCCCTGGGTCCTGAGGTCATGACAGGATACCCACGGCACACCCTGGCCCCAACTCCAGACCTCTGCTCAGTCAGTCTTCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 90 bp | TCTCTGGCTCAGGGGTGGCCACTGTCCTACAGGAAGGCACCTTCATaGGGACACTTGCTACTGTCTGGAGCGCCATGGCAGGGCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: SLAQGWPLSYRKAPS*GHLLLSGAPWQGLS Trigger: GCTCAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGGTGCCTTCCTGTAGGACAGTGGCCACCCCTGAGCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 90 bp | AGCAAGGCCACTGCTTCCTTAAGCAGGAGGAAGCCCAAGGCCTGGTaGGGAACTGACAGGGAGGACCATGAAGCCAGAGACAGGCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: SKATASLSRRKPKAW*GTDREDHEARDRQV Trigger: AACTTGCCTGTCTCTGGCTTCATGGTCCTCCCTGTCAGTTCCTCACCAGGCCTTGGGCTTCCTCCTGCTTAAGGAAGCAGTGGCCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 90 bp | GAGAACGGAGAGAAGGATGGGAAAGACAGAGGCTGGGGGAAGGAGTaGAGAGAGAACGGAGAGAAGGATGGGAAAGACAGAGGCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: ENGEKDGKDRGWGKE*RENGEKDGKDRGWG Trigger: CCCCCAGCCTCTGTCTTTCCCATCCTTCTCTCCGTTCTCTCTTCACTCCTTCCCCCAGCCTCTGTCTTTCCCATCCTTCTCTCCGTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 90 bp | CTAGGGTTGACATTATCCATCTTCTCACTTCCTGGAAATAGGACCTaGCCCCTGGGCCCCAACACAGCCTTACCTTACCCTCCTGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: LGLTLSIFSLPGNRT*PLGPNTALPYPPVP Trigger: GGGGACAGGAGGGTAAGGTAAGGCTGTGTTGGGGCCCAGGGGCCAGGTCCTATTTCCAGGAAGTGAGAAGATGGATAATGTCAACCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 90 bp | AGACAGAGGCTGGGGGAAGGAGTGAAGAGAGAACGGAGAGAAGGATaGGAAAGACAGAGGCTGGGGGAAGGAGTGAAGAGAGAACGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RQRLGEGVKRERREG*ERQRLGEGVKRERR Trigger: TCTCCGTTCTCTCTTCACTCCTTCCCCCAGCCTCTGTCTTTCCCATCCTTCTCTCCGTTCTCTCTTCACTCCTTCCCCCAGCCTCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 90 bp | AGAAAGAGGCTGGGGGAAGGAGTGAAGAGAGAACGGAGAGAAGGATaGGAAAGACAGAGGCTGGGGGAAGGAGTGAAGAGAGAACGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RKRLGEGVKRERREG*ERQRLGEGVKRERR Trigger: TCTCCGTTCTCTCTTCACTCCTTCCCCCAGCCTCTGTCTTTCCCATCCTTCTCTCCGTTCTCTCTTCACTCCTTCCCCCAGCCTCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 90 bp | GCTACTGTCTGGAGCGCCATGGCAGGGCCTGAGCAGAAAGGAAATTaGGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ATVWSAMAGPEQKGN*GYAAKNGVSFQSRR Trigger: TCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCTCAATTTCCTTTCTGCTCAGGCCCTGCCATGGCGCTCCAGACAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 90 bp | CCCAAAGTACATGCATGGGGAGGCAAGCCCATGAATAGGATGGCTTaGCTAAGAGTCACAGCAAGTCGACACCTGAGACCTCTAGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PKVHAWGGKPMNRMA*LRVTASRHLRPLVH Trigger: ATGCACTAGAGGTCTCAGGTGTCGACTTGCTGTGACTCTTAGGCAAGCCATCCTATTCATGGGCTTGCCTCCCCATGCATGTACTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 90 bp | GAAAAGGAGAAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTaGCATGGTTCAGCTGCCTGTAATAAGTGTGGAGGTCTCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: EKEKEFRMPKTVDPH*HGSAACNKCGGLWL Trigger: GAGCCAGAGACCTCCACACTTATTACAGGCAGCTGAACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTTCTCCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCACCTTCATGGGGACACTTGCTACTGTCTGGAGCGCCATGGCAGGGCCTGCCTGGAAATAGGACCTaGCCCCTGGGCCCCAACACA | + |
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Preference number: 2 (lower is better) Translates to: KAPSWGHLLLSGAPWQGLPGNRT*PLGPNT Trigger: TGTGTTGGGGCCCAGGGGCCAGGTCCTATTTCCAGG...CAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGGTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 90 bp | CCCCAACACAGCCTTACCTTACCCTCCTGTCCCCTGCTGCCCTTCTaGTGCCAGCTGTCCCTACTCACAGCTGCCACATCTGGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PQHSLTLPSCPLLPF*CQLSLLTAATSGSL Trigger: CAGTGAACCAGATGTGGCAGCTGTGAGTAGGGACAGCTGGCACAAGAAGGGCAGCAGGGGACAGGAGGGTAAGGTAAGGCTGTGTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCCCTCCCGGAGCAGGGGTGTCTGTGCCTATGCCTCTTCTTTCAGCAAAAAGCAGAGGTCTGGAGTTaGGGCCAGGGTGTGCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SSLPEQGCLCLCLFFQQKAEVWS*GQGVPW Trigger: CCACGGCACACCCTGGCCCCAACTCCAGACCTCTGC...TTTTTGCTGAAAGAAGAGGCATAGGCACAGACACCCCTGCTCCGGGAGGGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTATAGGACCTGGCCCCTaGGCCCCAACACAGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QSRRTTFLMARALGLEHLIGPGP*APTQPY Trigger: GTAAGGCTGTGTTGGGGCCCAGGGGCCAGGTCCTAT...AAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCTGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGAAGGTTCATGCTTGTAGGGCCATGGGCAACCAGCAAGGCCACTGCTTCCTGCTGCCCTTCTTGTaGCAGCTGTCCCTACTCACA | + |
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Preference number: 2 (lower is better) Translates to: LGKVHACRAMGNQQGHCFLLPFL*QLSLLT Trigger: TGTGAGTAGGGACAGCTGGCACAAGAAGGGCAGCAG...GAAGCAGTGGCCTTGCTGGTTGCCCATGGCCCTACAAGCATGAACCTTCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTGTCATCCCTCCCGGAGCAGGGGTGTCTGTGCCTATGCCTCTTCTTTCATACCCTCCTGTCCCCTaGTGCCCTTCTTGTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FSVIPPGAGVSVPMPLLSYPPVP*CPSCAS Trigger: GCTGGCACAAGAAGGGCAGCAGGGGACAGGAGGGTA...TGAAAGAAGAGGCATAGGCACAGACACCCCTGCTCCGGGAGGGATGACACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGTTCACTGGGCTTTATCCTTGTAGAGGGCCCAGGGGTTCCTCATTCCAGGGATACGGGGAAGACTaGCTGAGCAGAGGTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: IWFTGLYPCRGPRGSSFQGYGED*LSRGLE Trigger: CTCCAGACCTCTGCTCAGTCAGTCTTCCCCGTATCC...CTGGAATGAGGAACCCCTGGGCCCTCTACAAGGATAAAGCCCAGTGAACCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTGTCATCCCTCCCGGAGCAGGGGTGTCTGTGCCTATGCCTCTTCTTTCAGGCTGGGGGAAGGAGTaGAGAGAGAACAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSVIPPGAGVSVPMPLLSGWGKE*RENREK Trigger: CTTCTCTCTGTTCTCTCTTCACTCCTTCCCCCAGCC...TGAAAGAAGAGGCATAGGCACAGACACCCCTGCTCCGGGAGGGATGACACTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACCTCCTAAGCTCTCCCTaGTTACAGGGAGATTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: RRTTFLMARALGLEHLGHLLSSP*LQGDLP Trigger: GGGCAAATCTCCCTGTAAGCAGGGAGAGCTTAGGAG...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAAACAAATTTATTGGCTTTTGCTTTTTCAGGGTGCTGTGTGGGTCCCTGGCAAGCCCAAGGCCTGGTaGGGAACTGACAGGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GKQIYWLLLFQGAVWVPGKPKAW*GTDRED Trigger: GTCCTCCCTGTCAGTTCCTCACCAGGCCTTGGGCTT...GCCAGGGACCCACACAGCACCCTGAAAAAGCAAAAGCCAATAAATTTGTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACTGGGGTGCCTCATTCTaGGCATTAAACAGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RRTTFLMARALGLEHLGHWGASF*ALNRKW Trigger: CCACTTCCTGTTTAATGCTCAGAATGAGGCACCCCA...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCCCTCCCGGAGCAGGGGTGTCTGTGCCTATGCCTCTTCTTTCAGCAAAAAGAACAGAGAGAAGGATaGGAAAGCGGAGACAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SSLPEQGCLCLCLFFQQKEQREG*ESGDRV Trigger: CACCCTGTCTCCGCTTTCCCATCCTTCTCTCTGTTC...TTTTTGCTGAAAGAAGAGGCATAGGCACAGACACCCCTGCTCCGGGAGGGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACAGACAGTTGAAGGCTTaGAGCAGCTTGGGTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: RRTTFLMARALGLEHLGHRQLKA*SSLGRD Trigger: GTCTCTACCCAAGCTGCTCCAAGCCTTCAACTGTCT...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR GCA 90 bp | AGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTACGTTCCTGTTCAAAGGGCTTTCTaGAGCCAGTCTCCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: RLCCQEWCLFSEQENYVPVQRAF*SQSPHP Trigger: GGGATGGGGAGACTGGCTGCAGAAAGCCCTTTGAAC...AGGAACGTAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTACGTTCCTGAACGGAGAGAAGGATaGGAAAGACAGAGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RLCCQEWCLFSEQENYVPERREG*ERQRLG Trigger: CCCCAGCCTCTGTCTTTCCCATCCTTCTCTCCGTTC...AGGAACGTAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTACGTTCCTGAGATTTGCCCATCTTaGAGGAGGCCAGAGCAACGG | + |
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Preference number: 2 (lower is better) Translates to: RLCCQEWCLFSEQENYVPEICPS*RRPEQR Trigger: CCGTTGCTCTGGCCTCCTCCAAGATGGGCAAATCTC...AGGAACGTAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGAGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTAGTCCCTACTCACAGCTaGCACATCTGGTTCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: EIEAMLPRMVSLFRAGELVPTHS*HIWFTG Trigger: CCCAGTGAACCAGATGTGGCAGCTGTGAGTAGGGAC...TAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCTCAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | CAACGGGCATCTCAAGCTTGTGTCAGGTGCTTGGCATCGAGGTTCAGGAGCGTGGACAGAATATTTATTTaGTCCATAGTCTCTAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QRASQACVRCLASRFRSVDRIFI*SIVSRE Trigger: TTCCCTAGAGACTATGGACCAAATAAATATTCTGTC...CACGCTCCTGAACCTCGATGCCAAGCACCTGACACAAGCTTGAGATGCCCGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGAGAAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTGGCATGGTCAGCAAAAAGCAGATTaGGCAGAGCAAGTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: EKEKEFRMPKTVDPHWHGQQKAD*AEQVST Trigger: TGTGGACACTTGCTCTGCCCAATCTGCTTTTTGCTG...ACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTTCTCCTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 72 bp | GAGTTGGGGCCAGGGTGTGCCGTGGGTATCCTGTCATaGCCTCAGGACCCAGGGCTGGGCGCCTCGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ELGPGCAVGILS*PQDPGLGASAG Trigger: TCCTGCCGAGGCGCCCAGCCCTGGGTCCTGAGGTCATGACAGGATACCCACGGCACACCCTGGCCCCAACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | CTGACTGAGCAGAGGTCTGGAGTTGGGGCCAGGGTGTaGCGTGGGTATCCTGTCATGACCTCAGGACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LTEQRSGVGARV*RGYPVMTSGPR Trigger: CCTGGGTCCTGAGGTCATGACAGGATACCCACGGCACACCCTGGCCCCAACTCCAGACCTCTGCTCAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | CCCAACACAGCCTTACCTTACCCTCCTGTCCCCTGCTaGCCTTCTTGTGCCAGCTGTCCCTACTCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PNTALPYPPVPC*PSCASCPYSQL Trigger: CAGCTGTGAGTAGGGACAGCTGGCACAAGAAGGGCAGCAGGGGACAGGAGGGTAAGGTAAGGCTGTGTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | CATGCTTGTAGGGCCATGGGCAACCAGCAAGGCCACTaGTTCCTTAAGCAGGAGGAAGCCCAAGGCCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: HACRAMGNQQGH*FLKQEEAQGLV Trigger: CACCAGGCCTTGGGCTTCCTCCTGCTTAAGGAAGCAGTGGCCTTGCTGGTTGCCCATGGCCCTACAAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTAATAAGTGTGGAGGTCTCTGGCTCAGGGGTGGCCACTGTCCTACAGGAGGAGATTTGCCCATCTaGGAGGAGGCCAGAGCAACG | + |
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Preference number: 3 (lower is better) Translates to: ACNKCGGLWLRGGHCPTGGDLPI*EEARAT Trigger: CGTTGCTCTGGCCTCCTCCAAGATGGGCAAATCTCC...TCCTGTAGGACAGTGGCCACCCCTGAGCCAGAGACCTCCACACTTATTACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CCATCTTCTCACTTCCTGGAAATAGGACCTGGCCCCTaGGCCCCAACACAGCCTTACCTTACCCTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PSSHFLEIGPGP*APTQPYLTLLS Trigger: GGACAGGAGGGTAAGGTAAGGCTGTGTTGGGGCCCAGGGGCCAGGTCCTATTTCCAGGAAGTGAGAAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CAA 90 bp | AAGGCACCTTCATGGGGACACTTGCTACTGTCTGGAGCGCCATGGCAGGGCCTGTCAGCAAAAAGCAGATaGGGCAGAGCAAGTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: KAPSWGHLLLSGAPWQGLSAKSR*GRASVH Trigger: GTGGACACTTGCTCTGCCCAATCTGCTTTTTGCTGA...CAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGGTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 72 bp | ACTGCTTCCTTAAGCAGGAGGAAGCCCAAGGCCTGGTaGGGAACTGACAGGGAGGACCATGAAGCCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: TASLSRRKPKAW*GTDREDHEARD Trigger: GTCTCTGGCTTCATGGTCCTCCCTGTCAGTTCCTCACCAGGCCTTGGGCTTCCTCCTGCTTAAGGAAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CTTGTGCCAGCTGTCCCTACTCACAGCTGCCACATCTaGTTCACTGGGCTTTATCCTTGTAGAGGGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LVPAVPTHSCHI*FTGLYPCRGPR Trigger: CCTGGGCCCTCTACAAGGATAAAGCCCAGTGAACCAGATGTGGCAGCTGTGAGTAGGGACAGCTGGCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CAGGAAGGCACCTTCATGGGGACACTTGCTACTGTCTaGAGCGCCATGGCAGGGCCTGAGCAGAAAGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: QEGTFMGTLATV*SAMAGPEQKGN Trigger: ATTTCCTTTCTGCTCAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGGTGCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CATGGTTCAGCTGCCTGTAATAAGTGTGGAGGTCTCTaGCTCAGGGGTGGCCACTGTCCTACAGGAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: HGSAACNKCGGL*LRGGHCPTGRH Trigger: GTGCCTTCCTGTAGGACAGTGGCCACCCCTGAGCCAGAGACCTCCACACTTATTACAGGCAGCTGAACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | GTAGAGACAGGACTTTCATACAGGGGCAGCAAGCTCTaGCTGTCTGGACCTGGGGTGCCTCATTCTGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: VETGLSYRGSKL*LSGPGVPHSEH Trigger: ATGCTCAGAATGAGGCACCCCAGGTCCAGACAGCCAGAGCTTGCTGCCCCTGTATGAAAGTCCTGTCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CCTTCATGGGGACACTTGCTACTGTCTGGAGCGCCATaGCAGGGCCTGAGCAGAAAGGAAATTGAGGCTATG | + |
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Preference number: 3 (lower is better) Translates to: PSWGHLLLSGAP*QGLSRKEIEAM Trigger: CATAGCCTCAATTTCCTTTCTGCTCAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | GCTGCCCTTCTTGTGCCAGCTGTCCCTACTCACAGCTaGCACATCTGGTTCACTGGGCTTTATCCTTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AALLVPAVPTHS*HIWFTGLYPCR Trigger: TCTACAAGGATAAAGCCCAGTGAACCAGATGTGGCAGCTGTGAGTAGGGACAGCTGGCACAAGAAGGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | CATGCATGGGGAGGCAAGCCCATGAATAGGATGGCTTaGCTAAGAGTCACAGCAAGTCGACACCTGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: HAWGGKPMNRMA*LRVTASRHLRP Trigger: AGGTCTCAGGTGTCGACTTGCTGTGACTCTTAGGCAAGCCATCCTATTCATGGGCTTGCCTCCCCATGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | ACATTATCCATCTTCTCACTTCCTGGAAATAGGACCTaGCCCCTGGGCCCCAACACAGCCTTACCTTACCCT | + |
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Preference number: 3 (lower is better) Translates to: TLSIFSLPGNRT*PLGPNTALPYP Trigger: AGGGTAAGGTAAGGCTGTGTTGGGGCCCAGGGGCCAGGTCCTATTTCCAGGAAGTGAGAAGATGGATAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR GCA 72 bp | TACCTCACCCATACCCCAAGCAATGCAAAGGACAGATaGCACAGGATGGAATGGGACAAAGGACATAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: YLTHTPSNAKDR*HRMEWDKGHRG Trigger: CCCTCTATGTCCTTTGTCCCATTCCATCCTGTGGCATCTGTCCTTTGCATTGCTTGGGGTATGGGTGAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | CAAATTTATTGGCTTTTGCTTTTTCAGGGTGCTGTGTaGGTCCCTGGCAAGTCCCATGGTGGTGTTGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QIYWLLLFQGAV*VPGKSHGGVEW Trigger: CCACTCAACACCACCATGGGACTTGCCAGGGACCCACACAGCACCCTGAAAAAGCAAAAGCCAATAAATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CAA 90 bp | GAAAAGGAGAAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTGGCATGGTCCAGAGACAGGCAAGTaGCTAGGGTTGACATTATCC | + |
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Preference number: 3 (lower is better) Translates to: EKEKEFRMPKTVDPHWHGPETGK*LGLTLS Trigger: GGATAATGTCAACCCTAGCAACTTGCCTGTCTCTGG...ACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTTCTCCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR-3UTR CAA 90 bp | GAAATTGAGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTAGGATTTCTCAGACAGTaGAAGGCTTGGAGCAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EIEAMLPRMVSLFRAGELGFLRQ*KAWSSL Trigger: CAAGCTGCTCCAAGCCTTCAACTGTCTGAGAAATCC...TAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCTCAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CCA 72 bp | AAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTaGCATGGTTCAGCTGCCTGTAATAAGTGTGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KEFRMPKTVDPH*HGSAACNKCGG Trigger: ACCTCCACACTTATTACAGGCAGCTGAACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR TCA 72 bp | GGTGTTGAGTGGCAGGGACAGATGCTTAATTCACTTTaGAGATGTTTATGGATCTATACAGAGATGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GVEWQGQMLNSL*RCLWIYTEMVE Trigger: CTCCACCATCTCTGTATAGATCCATAAACATCTTCAAAGTGAATTAAGCATCTGTCCCTGCCACTCAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 72 bp | CCACTGTCCTACAGGAAGGCACCTTCATGGGGACACTaGCTACTGTCTGGAGCGCCATGGCAGGGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSYRKAPSWGH*LLSGAPWQGLS Trigger: GCTCAGGCCCTGCCATGGCGCTCCAGACAGTAGCAAGTGTCCCCATGAAGGTGCCTTCCTGTAGGACAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTTCGTCCTCTGGCTCCTaGAGGAAGAAGGTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSRRTTFLMARALGLEHLSSSGS*RKKVGG Trigger: GCCGCCCACCTTCTTCCTGCAGGAGCCAGAGGACGA...AAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCTGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | CTAGGGAAGGTTCATGCTTGTAGGGCCATGGGCAACCAGCAAGGCCACTGCTTCTTGGGGTTGAGCGCCTaGAGGCCTCCGAAGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKVHACRAMGNQQGHCFLGLSA*RPPKLA Trigger: TGCAAGCTTCGGAGGCCTGCAGGCGCTCAACCCCAA...GAAGCAGTGGCCTTGCTGGTTGCCCATGGCCCTACAAGCATGAACCTTCCCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | CAACGGGCATCTCAAGCTTGTGTCAGGTGCTTGGCATCGAGGTTCAGGAGCGTGACACGAGGTTGCGGTTaGAATGCAGGGGCGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRASQACVRCLASRFRSVTRGCG*NAGAAG Trigger: ACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGT...CACGCTCCTGAACCTCGATGCCAAGCACCTGACACAAGCTTGAGATGCCCGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR TCA 90 bp | CATCCCTCCCGGAGCAGGGGTGTCTGTGCCTATGCCTCTTCTTTCAGCAAAAAGGCGGGGACTTTTGGCTaGAAGAGGTGGTGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPSRSRGVCAYASSFSKKAGTFG*KRWWQL Trigger: CAGCTGCCACCACCTCTTTCAGCCAAAAGTCCCCGC...CTTTTTGCTGAAAGAAGAGGCATAGGCACAGACACCCCTGCTCCGGGAGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACAGGTTGCGGTTGGAATaGAGGGGCGGCAGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRTTFLMARALGLEHLGHRLRLE*RGGRWE Trigger: TTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCT...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACCAGGCCTCCGAAGCTTaGAGAGGGCAGCTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RRTTFLMARALGLEHLGHQASEA*RGQLHI Trigger: GATGTGGAGCTGCCCTCTGCAAGCTTCGGAGGCCTG...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | AGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGGTCACAGAGGTGGTGGCAGCTaGGTAGAGAGCAGGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTTFLMARALGLEHLGHRGGGS*VESRPV Trigger: AACGGGCCTGCTCTCTACCCAGCTGCCACCACCTCT...GTGACCAAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTAAAAGGCCTCCCGCATaGCAGAGAGGCGGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSRRTTFLMARALGLEHLKRPPA*QRGGWG Trigger: ACCCCAACCGCCTCTCTGCCATGCGGGAGGCCTTTT...AAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCTGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR TCA 90 bp | AGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTACGTTCCTAGAGGCGGTTGGGGTTaGGCGCCTGCAGGCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLCCQEWCLFSEQENYVPRGGWG*APAGLR Trigger: TCGGAGGCCTGCAGGCGCTCAACCCCAACCGCCTCT...AGGAACGTAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGGAGAACTACGTTCCTGATGGCTAGGGCCCTGGGCTTAGAGCATCTTGCCTGCGGGGACTTTTaGCTGAAAGAGGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRRTTFLMARALGLEHLACGDF*LKEVVA Trigger: TGCCACCACCTCTTTCAGCCAAAAGTCCCCGCAGGC...AAGATGCTCTAAGCCCAGGGCCCTAGCCATCAGGAACGTAGTTCTCCTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | ATCTCAAGCTTGTGTCAGGTGCTTGGCATCGAGGTTCAGGAGCGTGAGACAGAGTGGTCAACACGAGGTTaGGGTTGGAATGCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSLCQVLGIEVQERETEWSTRG*GWNAGA Trigger: CGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCA...CTCTGTCTCACGCTCCTGAACCTCGATGCCAAGCACCTGACACAAGCTTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAGTGTCCACACTGATGACTCCTAAGCTCTCCCTGCTTACAGGGAGATTTCAGAGGGCCCGGGCCTaGGGGGACTTTTGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EQVSTLMTPKLSLLTGRFQRARA*GDFWLK Trigger: TTTCAGCCAAAAGTCCCCGCAGGCCCGGGCCCTCTG...AAATCTCCCTGTAAGCAGGGAGAGCTTAGGAGTCATCAGTGTGGACACTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | GAGCAAGTGTCCACACTGATGACTCCTAAGCTCTCCCTGCTTACAGGGAGATTTCCTGCAGGAAGAAGGTaGGCGGCTCGTAGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQVSTLMTPKLSLLTGRFPAGRR*AARSGS Trigger: GCTCCCACTACGAGCCGCCCACCTTCTTCCTGCAGG...AAATCTCCCTGTAAGCAGGGAGAGCTTAGGAGTCATCAGTGTGGACACTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 72 bp | CAGTGCTTCCACAACCTAGCTGGATGTGTCTCTCACTaGTCTGGGTGTAGGGCTAAGTGCCGGATGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QCFHNLAGCVSH*SGCRAKCRMCT Trigger: TGTACACATCCGGCACTTAGCCCTACACCCAGACAAGTGAGAGACACATCCAGCTAGGTTGTGGAAGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 72 bp | CACGGATTTCTCAGACAGTTGAAGGCTTGGAGCAGCTaGGGTAGAGACAGGACTTTCATACAGGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGFLRQLKAWSS*GRDRTFIQGQQ Trigger: TTGCTGCCCCTGTATGAAAGTCCTGTCTCTACCCAAGCTGCTCCAAGCCTTCAACTGTCTGAGAAATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 72 bp | CTGACAGGGAGGACCATGAAGCCAGAGACAGGCAAGTaGCTAGGGTTGACATTATCCATCTTCTCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGRTMKPETGK*LGLTLSIFSLP Trigger: AGGAAGTGAGAAGATGGATAATGTCAACCCTAGCAACTTGCCTGTCTCTGGCTTCATGGTCCTCCCTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR GCA 90 bp | GGGAAACAAATTTATTGGCTTTTGCTTTTTCAGGGTGCTGTGTGGGTCCCTGGCGAGCAGAATCACAGTTaGCAAGATGCCCCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKQIYWLLLFQGAVWVPGEQNHS*QDAPSD Trigger: ATCACTGGGGGCATCTTGGCAACTGTGATTCTGCTC...GCCAGGGACCCACACAGCACCCTGAAAAAGCAAAAGCCAATAAATTTGTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CCA 90 bp | GAAAAGGAGAAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTGGCATGGTAAAGTCTTCGTCCTCTaGCTCCTGCAGGAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKEKEFRMPKTVDPHWHGKVFVL*LLQEEG Trigger: ACCTTCTTCCTGCAGGAGCCAGAGGACGAAGACTTT...ACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTTCTCCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| 3UTR CAA 72 bp | AGGACCATGAAGCCAGAGACAGGCAAGTTGCTAGGGTaGACATTATCCATCTTCTCACTTCCTGGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTMKPETGKLLG*TLSIFSLPGNR Trigger: CCTATTTCCAGGAAGTGAGAAGATGGATAATGTCAACCCTAGCAACTTGCCTGTCTCTGGCTTCATGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 90 bp | TGGTGGCAGCTGGGTAGAGAGCAGGCCCGTTGGTCAACACGAGGTTaGGGTTGGAATGCAGGGGCGGCAGGTGGGAATGCACAGCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WWQLGREQARWSTRG*GWNAGAAGGNAQRS Trigger: ACTTCGCTGTGCATTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCAACGGGCCTGCTCTCTACCCAGCTGCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 90 bp | GGCAGAGAGGCGGTTGGGGTTGAGCGCCTGCAGGCCTCCGAAGCTTaGAGAGGGCAGCTCCACATCTTCCTGGCTGATGCTTTTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GREAVGVERLQASEA*RGQLHIFLADAFVG Trigger: GCCTACAAAAGCATCAGCCAGGAAGATGTGGAGCTGCCCTCTGCAAGCTTCGGAGGCCTGCAGGCGCTCAACCCCAACCGCCTCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS CCA 90 bp | CCGTTGGTCAACACGAGGTTGCGGTTGGAATGCAGGGGCGGCAGGTaGGAATGCACAGCGAAGTCGGGTTCCTCCTCGTCCTCCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLVNTRLRLECRGGR*ECTAKSGSSSSSSD Trigger: ATCCGAGGAGGACGAGGAGGAACCCGACTTCGCTGTGCATTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS CCA 90 bp | CAGCTGGGTAGAGAGCAGGCCCGTTGGTCAACACGAGGTTGCGGTTaGAATGCAGGGGCGGCAGGTGGGAATGCACAGCGAAGTCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLGREQARWSTRGCG*NAGAAGGNAQRSRV Trigger: AACCCGACTTCGCTGTGCATTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCAACGGGCCTGCTCTCTACCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CAA 90 bp | TGTGCCAGCTGTCCCTACTCACAGCTGCCACATCTGGTTCACTGGGCTTTATCCGAGAGGCGGTTGGGGTaGAGCGCCTGCAGGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CASCPYSQLPHLVHWALSERRLG*SACRPP Trigger: CGGAGGCCTGCAGGCGCTCAACCCCAACCGCCTCTC...GGATAAAGCCCAGTGAACCAGATGTGGCAGCTGTGAGTAGGGACAGCTGGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CAA 90 bp | ATCTCAAGCTTGTGTCAGGTGCTTGGCATCGAGGTTCAGGAGCGTGAGACAGAGAACACGAGGTTGCGGTaGGAATGCAGGGGCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSLCQVLGIEVQERETENTRLR*ECRGGR Trigger: CCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTT...CTCTGTCTCACGCTCCTGAACCTCGATGCCAAGCACCTGACACAAGCTTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CAA 90 bp | GAAAAGGAGAAGGAATTCAGGATGCCAAAGACAGTAGATCCTCACTGGCATGGTGCAGGCCTCCGAAGCTaGCAGAGGGCAGCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: EKEKEFRMPKTVDPHWHGAGLRS*QRAAPH Trigger: ATGTGGAGCTGCCCTCTGCAAGCTTCGGAGGCCTGC...ACCATGCCAGTGAGGATCTACTGTCTTTGGCATCCTGAATTCCTTCTCCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS-3UTR CAA 90 bp | GAAATTGAGGCTATGCTGCCAAGAATGGTGTCTCTTTTCAGAGCAGGAGAACTAGGCCTGCGGGGACTTTaGGCTGAAAGAGGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EIEAMLPRMVSLFRAGELGLRGL*AERGGG Trigger: GCCACCACCTCTTTCAGCCAAAAGTCCCCGCAGGCC...TAGTTCTCCTGCTCTGAAAAGAGACACCATTCTTGGCAGCATAGCCTCAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS CAA 90 bp | CGGCTTCGGGAAAAGGCCTCCCGCATGGCAGAGAGGCGGTTGGGGTaGAGCGCCTGCAGGCCTCCGAAGCTTGCAGAGGGCAGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RLREKASRMAERRLG*SACRPPKLAEGSST Trigger: TGTGGAGCTGCCCTCTGCAAGCTTCGGAGGCCTGCAGGCGCTCAACCCCAACCGCCTCTCTGCCATGCGGGAGGCCTTTTCCCGAAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 72 bp | TCCCGCATGGCAGAGAGGCGGTTGGGGTTGAGCGCCTaGAGGCCTCCGAAGCTTGCAGAGGGCAGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRMAERRLGLSA*RPPKLAEGSST Trigger: TGTGGAGCTGCCCTCTGCAAGCTTCGGAGGCCTGCAGGCGCTCAACCCCAACCGCCTCTCTGCCATGCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 72 bp | GCAGGCCCGTTGGTCAACACGAGGTTGCGGTTGGAATaGAGGGGCGGCAGGTGGGAATGCACAGCGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPLVNTRLRLE*RGGRWECTAKS Trigger: CGACTTCGCTGTGCATTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCAACGGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS CCA 72 bp | AACACGAGGTTGCGGTTGGAATGCAGGGGCGGCAGGTaGGAATGCACAGCGAAGTCGGGTTCCTCCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NTRLRLECRGGR*ECTAKSGSSSS Trigger: GGACGAGGAGGAACCCGACTTCGCTGTGCATTCCCACCTGCCGCCCCTGCATTCCAACCGCAACCTCGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS CCA 72 bp | AAGAGGTGGTGGCAGCTGGGTAGAGAGCAGGCCCGTTaGTCAACACGAGGTTGCGGTTGGAATGCAGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KRWWQLGREQAR*STRGCGWNAGA Trigger: CGCCCCTGCATTCCAACCGCAACCTCGTGTTGACCAACGGGCCTGCTCTCTACCCAGCTGCCACCACCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 72 bp | GCACAGAACAGCGATGATACAGAGCAGAATCACAGTTaGCAAGATGCCCCCAGTGATGACCACAGTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQNSDDTEQNHS*QDAPSDDHSPG Trigger: GCCGGGACTGTGGTCATCACTGGGGGCATCTTGGCAACTGTGATTCTGCTCTGTATCATCGCTGTTCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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| CDS GCA 72 bp | CGGGTTCCTCCTCGTCCTCCTCGGATTCGTCCTTCTTaGAGCAGTAATACTGAAGCCGACAGTAGCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVPPRPPRIRPS*SSNTEADSSTE Trigger: TTCTGTGCTACTGTCGGCTTCAGTATTACTGCTGCAAGAAGGACGAATCCGAGGAGGACGAGGAGGAACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151224.3 |
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