RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060967

Ensembl transcript IDs: ENSMUST00000074232.7

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TGCAATGAAGACTACTTTAATGGATCAAACATGAGAGTGGCTTGTTATTTCACTAGTGTTCTGCTCCGGTaGCCTGGGAACAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CNEDYFNGSNMRVACYFTSVLLR*PGNSFR
Trigger: CCTGAAGCTGTTCCCAGGCCACCGGAGCAGAACACT...AGTGAAATAACAAGCCACTCTCATGTTTGATCCATTAAAGTAGTCTTCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR CCA 90 bp TGCAATGAAGACTACTTTAATGGATCAAACATGAGAGTGGCTTGTTATTTCACTTCTGCTCCGGTGGCCTaGGAACAGCTTCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: CNEDYFNGSNMRVACYFTSAPVA*EQLQDF
Trigger: AAAATCCTGAAGCTGTTCCCAGGCCACCGGAGCAGA...AGTGAAATAACAAGCCACTCTCATGTTTGATCCATTAAAGTAGTCTTCATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR CCA 90 bp CTTTTTAGACATAAACATGATTTTAGCAACAGCCACTGTATTCTGGAGGGTGAAAATCCATATCATTTCTaGGCCTCCCCAGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: LFRHKHDFSNSHCILEGENPYHF*ASPDAC
Trigger: ACAGGCATCTGGGGAGGCCCAGAAATGATATGGATT...TTCACCCTCCAGAATACAGTGGCTGTTGCTAAAATCATGTTTATGTCTAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR TCA 90 bp TCACTTCTTTTTAGACATAAACATGATTTTAGCAACAGCCACTGTATTCTGGAGAGGCTTCTTGCTTTTTaGCTTTTTCGGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SLLFRHKHDFSNSHCILERLLAF*LFRWDQ
Trigger: CTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCT...CTCCAGAATACAGTGGCTGTTGCTAAAATCATGTTTATGTCTAAAAAGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR CCA 90 bp AGTTGCAATGAAGACTACTTTAATGGATCAAACATGAGAGTGGCTTGTTATTTCAATAGATCAGAATATTaGCAGGCTTCTTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SCNEDYFNGSNMRVACYFNRSEY*QASCFL
Trigger: CAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATT...GAAATAACAAGCCACTCTCATGTTTGATCCATTAAAGTAGTCTTCATTGCAACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS TCA 90 bp CCTGTCAATCAAATAGATCAGAATATTGGCAGGCTTCTTGCTTTTTaGCTTTTTCGGTGGGACCAGCTCAGTGTTCTGCTCCGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PVNQIDQNIGRLLAF*LFRWDQLSVLLRWP
Trigger: AGGCCACCGGAGCAGAACACTGAGCTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATTTGATTGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS GCA 90 bp CCAGATGCCTGTCAATCAAATAGATCAGAATATTGGCAGGCTTCTTaGTTTTTGACTTTTTCGGTGGGACCAGCTCAGTGTTCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: PDACQSNRSEYWQAS*FLTFSVGPAQCSAP
Trigger: CGGAGCAGAACACTGAGCTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATTTGATTGACAGGCATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR CAA 90 bp TTTTTAGACATAAACATGATTTTAGCAACAGCCACTGTATTCTGGAGGGTGAACCAGGCTTCTTGCTTTTaGACTTTTTCGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: FLDINMILATATVFWRVNQASCF*TFSVGP
Trigger: TGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTG...GTTCACCCTCCAGAATACAGTGGCTGTTGCTAAAATCATGTTTATGTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS-3UTR CAA 90 bp CTTCTTTTTAGACATAAACATGATTTTAGCAACAGCCACTGTATTCTGGAGGGTATATTGGCAGGCTTCTaGCTTTTTGACTTTTTCGGT +
Preference number: 5 (lower is better)
Translates to: LLFRHKHDFSNSHCILEGILAGF*LFDFFG
Trigger: ACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATAT...ACCCTCCAGAATACAGTGGCTGTTGCTAAAATCATGTTTATGTCTAAAAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS CAA 90 bp GCCTGTCAATCAAATAGATCAGAATATTGGCAGGCTTCTTGCTTTTaGACTTTTTCGGTGGGACCAGCTCAGTGTTCTGCTCCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ACQSNRSEYWQASCF*TFSVGPAQCSAPVA
Trigger: GGCCACCGGAGCAGAACACTGAGCTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATTTGATTGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS TCA 72 bp CAAATAGATCAGAATATTGGCAGGCTTCTTGCTTTTTaGCTTTTTCGGTGGGACCAGCTCAGTGTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QIDQNIGRLLAF*LFRWDQLSVLL
Trigger: GAGCAGAACACTGAGCTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS CCA 72 bp GTGTCCAAACCCATTCAAACAAATCCATATCATTTCTaGGCCTCCCCAGATGCCTGTCAATCAAATAGATCA +
Preference number: 6 (lower is better)
Translates to: VSKPIQTNPYHF*ASPDACQSNRS
Trigger: TGATCTATTTGATTGACAGGCATCTGGGGAGGCCCAGAAATGATATGGATTTGTTTGAATGGGTTTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7
CDS CAA 72 bp TCAAATAGATCAGAATATTGGCAGGCTTCTTGCTTTTaGACTTTTTCGGTGGGACCAGCTCAGTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SNRSEYWQASCF*TFSVGPAQCSA
Trigger: AGCAGAACACTGAGCTGGTCCCACCGAAAAAGTCAAAAAGCAAGAAGCCTGCCAATATTCTGATCTATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074232.7