Pregenerated sensors for ERG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040732Ensembl transcript IDs: ENSMUST00000113848.11, ENSMUST00000121809.11, ENSMUST00000122199.10, ENSMUST00000171646.10, ENSMUST00000176345.10, ENSMUST00000233269.2, ENSMUST00000233664.2, ENSMUST00000233881.2
Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATGCCTGTGTaGTCTCTGACCATGGTGGCTACCAAGGTCACCTCTCGACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: DSLRKTGAHLPTMPV*SLTMVATKVTSRLL Trigger: GAGCAGTCGAGAGGTGACCTTGGTAGCCACCATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 90 bp | TTCGTTCTGACGAACGCACAGCGTTCGCGACTCATTAAGGAAAACTaGAGCCCACCTACCCACAATGCCTGTGTGGTCTCTGACCATGGT | + |
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Preference number: 1 (lower is better) Translates to: FVLTNAQRSRLIKEN*SPPTHNACVVSDHG Trigger: ACCATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTTCGTCAGAACGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 90 bp | TTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTaGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: FHSSRGTFDLCSLSL*RLLGDCTLLGKASI Trigger: GATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 90 bp | AACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTaGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: NKQMPAKKVHSHCGL*RGPPSLFLSASSLV Trigger: AACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR TCA 90 bp | CATAATACTGAAAAGGAGATGAGACCCTGGGTCATCTTCACAGTTTaGCAGAGCTGGCAGCTCTCTATCAAATGGAACGAATCTGATTTC | + |
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Preference number: 1 (lower is better) Translates to: HNTEKEMRPWVIFTV*QSWQLSIKWNESDF Trigger: GAAATCAGATTCGTTCCATTTGATAGAGAGCTGCCAGCTCTGTCAAACTGTGAAGATGACCCAGGGTCTCATCTCCTTTTCAGTATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR GCA 90 bp | GATTTCCTTTTCACAAAGAGACATATTTTTGGTTCTGAATACTACTaGTCCCAGTCCTCCACAAATCTGTGTCCTTACAACACTGACAGC | + |
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Preference number: 1 (lower is better) Translates to: DFLFTKRHIFGSEYY*SQSSTNLCPYNTDS Trigger: GCTGTCAGTGTTGTAAGGACACAGATTTGTGGAGGACTGGGAGCAGTAGTATTCAGAACCAAAAATATGTCTCTTTGTGAAAAGGAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR TCA 90 bp | GGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTACATACAATGTCTTTaGCAAGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTT | + |
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Preference number: 1 (lower is better) Translates to: GQLFFLVKLFYIQCL*QGWTTGYMSMYSIF Trigger: AAATATACTGTACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAAGCTTGACCAAAAAGAACAACTGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGGCGATTGTACACTGTTaGGAAAGGCCTCCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLAIVHC*ERPPSG Trigger: ACCAGATGGAGGCCTTTCCCAACAGTGTACAATCGC...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTGTTTGTGTGTGGTGTGTCTTTGGCTGGCCGAGAGCCATTGTGGTCTGTaGAGGGGCCCGCCATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCLCVVCLWLAESHCGL*RGPPSL Trigger: CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCT...CTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCTACATACAATGTCTTTaGCAAGGGTGGACCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: ANASQESPQPLWSVEGPAYIQCL*QGWTTG Trigger: ACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTA...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 90 bp | CCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTaGTGTTCGCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTG | + |
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Preference number: 2 (lower is better) Translates to: PALANRFHSSRGTFD*CSLSLWRLLGDCTL Trigger: CAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 90 bp | CGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTaGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RFHSSRGTFDLCSLS*WRLLGDCTLLGKAS Trigger: GGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTGCGATTGTACACTGTTaGGAAAGGCCTCCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PQLWPTVSTPHEALLICVAIVHC*ERPPSG Trigger: ACCAGATGGAGGCCTTTCCCAACAGTGTACAATCGC...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGGCGATTGTACACTGTTaGGAAAGGCCTCCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ALANRFHSSRGTFDLCSLAIVHC*ERPPSG Trigger: ACCAGATGGAGGCCTTTCCCAACAGTGTACAATCGC...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCGTAGTAATACTTGGGTaGCACCCACCCTCCCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSVVILG*HPPSPA Trigger: CGCAGGGGAGGGTGGGTGCCACCCAAGTATTACTAC...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTTGGTCAAGCTTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGGTAGTAATACTTGGGTaGCACCCACCCTCCCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LFGQAFLHTMSLTRVDHRVVILG*HPPSPA Trigger: CGCAGGGGAGGGTGGGTGCCACCCAAGTATTACTAC...CCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAAGCTTGACCAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTaGAGGGGCCCGCCATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WNESDFKENKQMPAKKVHSHCGL*RGPPSL Trigger: CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCT...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTTACATACAATGTCTTTaGCAAGGGTGGACCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: KVPHSTVCTLLKATSLGSYIQCL*QGWTTG Trigger: ACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTA...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR GCA 90 bp | AACGCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATAAGAAAACAAGCAAATaGCAGCCAAGAAAGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: NAQRSRLIKENWSPPTHNKKTSK*QPRKST Trigger: TGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTT...ATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCGCGATTGTACACTGTTaGGAAAGGCCTCCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSAIVHC*ERPPSG Trigger: ACCAGATGGAGGCCTTTCCCAACAGTGTACAATCGC...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATGTAGTAATACTTGGGTaGCACCCACCCTCCCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: RVDHRLYVHVQYILSFFYVVILG*HPPSPA Trigger: CGCAGGGGAGGGTGGGTGCCACCCAAGTATTACTAC...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAAACATCTCTCAACTCATGCCCTTTGGTCCCAAGGTGCCCTAAATTCAGCTATACTGAAAAGGAGATaGGACCCTGGGTCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: IKHLSTHALWSQGALNSAILKRR*DPGSSS Trigger: TGAAGATGACCCAGGGTCTCATCTCCTTTTCAGTAT...AGCTGAATTTAGGGCACCTTGGGACCAAAGGGCATGAGTTGAGAGATGTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTGTAGTAATACTTGGGTaGCACCCACCCTCCCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: GGPQVICPCTVYFELLLFVVILG*HPPSPA Trigger: CGCAGGGGAGGGTGGGTGCCACCCAAGTATTACTAC...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTGTGTGGTGTGTCTTaGGCTGGCCGAGGTCAACTCGTAGTGTATAAATGCATAAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCLFVCGVS*AGRGQLVVYKCISY Trigger: ATAACTTATGCATTTATACACTACGAGTTGACCTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTTACATACAATGTCTTTaGCAAGGGTGGACCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SKKTSKCQPRKSTAIVVCYIQCL*QGWTTG Trigger: ACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTA...ACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTGCGATTGTACACTGTTaGGAAAGGCCTCCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FSTYNVFDKGGPQVICPCAIVHC*ERPPSG Trigger: ACCAGATGGAGGCCTTTCCCAACAGTGTACAATCGC...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCTTAAGGCCACTTCCTTaGGCAGTTGTTCTTTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSLRPLP*AVVLFG Trigger: ACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAA...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCGGCAGTTGTTCTTTTTaGTCAAGCTTTTCTACATAC | + |
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Preference number: 2 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSGSCSF*SSFSTY Trigger: GTATGTAGAAAAGCTTGACCAAAAAGAACAACTGCC...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 90 bp | TGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTACATACAATGTCTTaGACAAGGGTGGACCACAGGTTATATGTCCATGTACAGTATATT | + |
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Preference number: 2 (lower is better) Translates to: WAVVLFGQAFLHTMS*TRVDHRLYVHVQYI Trigger: AATATACTGTACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAAGCTTGACCAAAAAGAACAACTGCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 90 bp | ACATTAAGCATTACAGAGTTAAAATTCAAGGCCACATCATATGTTTaGATTGTCTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLSITELKFKATSYV*IVSCVCVCVCVCVC Trigger: ACAAACACACACACACACACACACACACACACAAGAGACAATCAAAACATATGATGTGGCCTTGAATTTTAACTCTGTAATGCTTAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR TCA 72 bp | CTGGAGCCCACCTACCCACAATGCCTGTGTGGTCTCTaGCCATGGTGGCTACCAAGGTCACCTCTCGACTGC | + |
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Preference number: 3 (lower is better) Translates to: LEPTYPQCLCGL*PWWLPRSPLDC Trigger: GCAGTCGAGAGGTGACCTTGGTAGCCACCATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCGGCGATTGTACACTGTaGGGAAAGGCCTCCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: SKCQPRKSTAIVVCGGARGDCTL*GKASIW Trigger: CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCC...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCCTACATACAATGTCTTaGACAAGGGTGGACCACAGG | + |
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Preference number: 3 (lower is better) Translates to: ANASQESPQPLWSVEGPALHTMS*TRVDHR Trigger: CCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAG...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 72 bp | AGGAAAACTGGAGCCCACCTACCCACAATGCCTGTGTaGTCTCTGACCATGGTGGCTACCAAGGTCACCTCT | + |
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Preference number: 3 (lower is better) Translates to: RKTGAHLPTMPV*SLTMVATKVTS Trigger: AGAGGTGACCTTGGTAGCCACCATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGGGCGATTGTACACTGTaGGGAAAGGCCTCCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: ALANRFHSSRGTFDLCSLGDCTL*GKASIW Trigger: CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCC...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCTTAAGGCCACTTCCTaGGGCAGTTGTTCTTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SKCQPRKSTAIVVCGGARLKATS*GSCSFW Trigger: CCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAG...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 72 bp | ATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTaGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: MPAKKVHSHCGL*RGPPSLFLSAS Trigger: AGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 72 bp | CAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTaGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: QANASQESPQPL*SVEGPAISVFV Trigger: GACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CCA 72 bp | ACGAACGCACAGCGTTCGCGACTCATTAAGGAAAACTaGAGCCCACCTACCCACAATGCCTGTGTGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TNAQRSRLIKEN*SPPTHNACVVS Trigger: AGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTGGCGATTGTACACTGTaGGGAAAGGCCTCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LANRFHSSRGTFDLCSLSGDCTL*GKASIW Trigger: CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCC...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGAAAACTGGAGCCCACCTACCCACAATGCCTGTGTGGTCTCTGACCATGTTCAGCTGTGGTGGCTaGAGCAGCTGCCTTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: LRKTGAHLPTMPVWSLTMFSCGG*SSCLLS Trigger: GGATAGAAGGCAGCTGCTCAAGCCACCACAGCTGAA...CATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR TCA 72 bp | TCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTaGTTTGTGTTCGCTGAGTTTGTGGCGACTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGQPFPLLTRHF*FVFAEFVATAR Trigger: CCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR TCA 72 bp | TGGTCCCAAGGTGCCCTAAATTCAGCTGTGGTGGCTTaGGCAGCTGCCTTCTATCCTTTCCTTTCCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WSQGALNSAVVA*AAAFYPFLSSS Trigger: AGAGGAGGAAAGGAAAGGATAGAAGGCAGCTGCTCAAGCCACCACAGCTGAATTTAGGGCACCTTGGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR GCA 72 bp | CAAACATCTCTCAACTCATGCCCTTTGGTCCCAAGGTaGCCTAAATTCAGCTGTGGTGGCTTGAGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QTSLNSCPLVPR*PKFSCGGLSSC Trigger: GCAGCTGCTCAAGCCACCACAGCTGAATTTAGGGCACCTTGGGACCAAAGGGCATGAGTTGAGAGATGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGGCGATTGTACACTGTaGGGAAAGGCCTCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KTSKCQPRKSTAIVVCGGGDCTL*GKASIW Trigger: CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCC...CCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATGCCCTTAAGGCCACTTCCTaGGGCAGTTGTTCTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AQRSRLIKENWSPPTHNALKATS*GSCSFW Trigger: CCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAG...GGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCTCTGTTCCTGTTCTATaGCTTTCACTCAATCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SKCQPRKSTAIVVCGGARSVPVL*LSLNPG Trigger: ACCAGGATTGAGTGAAAGCAATAGAACAGGAACAGA...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTGTCTGCTTCTTCTTaGGTTTTGACATGGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLLSASS*VLTWFL Trigger: TAGAAACCATGTCAAAACCAAAGAAGAAGCAGACAA...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCTTGTCTGCTTCTTCTTaGGTTTTGACATGGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SKCQPRKSTAIVVCGGARLSASS*VLTWFL Trigger: TAGAAACCATGTCAAAACCAAAGAAGAAGCAGACAA...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTGTGTaGTGTGTCTTTGGCTGGCCGAGGTCAACTCGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVFVCV*CVFGWPRSTRS Trigger: ACTACGAGTTGACCTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTCTTAAGGCCACTTCCTaGGGCAGTTGTTCTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSVEGPAISVFVCFFFGFLKATS*GSCSFW Trigger: CCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAG...AAAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCAACTCATGCCCTTTGGTCCCAAGGTGCCCTAAATTCAGCTGTGGTGGCTTCTGTTCCTGTTCTATaGCTTTCACTCAATCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSTHALWSQGALNSAVVASVPVL*LSLNPG Trigger: ACCAGGATTGAGTGAAAGCAATAGAACAGGAACAGA...AGCCACCACAGCTGAATTTAGGGCACCTTGGGACCAAAGGGCATGAGTTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | AACGCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATCCGCCATCTCTGTTTTaGTCTGCTTCTTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NAQRSRLIKENWSPPTHNPPSLF*SASSLV Trigger: AACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGG...ATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR CCA 72 bp | TCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTaGCGACTGCTAGGCGATTGTACACTGTTGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRGTFDLCSLSL*RLLGDCTLLGK Trigger: CTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTCTGTTCCTGTTCTATaGCTTTCACTCAATCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VVCGGARHLCFCLLLLWFSVPVL*LSLNPG Trigger: ACCAGGATTGAGTGAAAGCAATAGAACAGGAACAGA...AAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTCTGTTCCTGTTCTATaGCTTTCACTCAATCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LWSVEGPAISVFVCFFFGSVPVL*LSLNPG Trigger: ACCAGGATTGAGTGAAAGCAATAGAACAGGAACAGA...ACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTGGGCAGTTGTTCTTTTaGGTCAAGCTTTTCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: VVCGGARHLCFCLLLLWFGQLFF*VKLFYI Trigger: TATGTAGAAAAGCTTGACCAAAAAGAACAACTGCCC...AAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATGGCGATTGTACACTGTaGGGAAAGGCCTCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVDHRLYVHVQYILSFFYGDCTL*GKASIW Trigger: CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCC...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR TCA 72 bp | ACATGGCTCACATTTCCCATAATACTGAAAAGGAGATaGGACCCTGGGTCATCTTCACAGTTTGACAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TWLTFPIILKRR*DPGSSSQFDRA Trigger: AGCTCTGTCAAACTGTGAAGATGACCCAGGGTCTCATCTCCTTTTCAGTATTATGGGAAATGTGAGCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR CCA 72 bp | TATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTaGGTGGCACCCACCCTCCCCTGCGAGTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YILSFFYFCSNT*VAPTLPCESLV Trigger: AACCAAAGACTCGCAGGGGAGGGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGGCAGTTGTTCTTTTaGGTCAAGCTTTTCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: SKKTSKCQPRKSTAIVVCGQLFF*VKLFYI Trigger: TATGTAGAAAAGCTTGACCAAAAAGAACAACTGCCC...ACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCATCTTCACAGTTTGACAGAGCTGGCAGCTCTCTATCAAATGGAACGAATTTGTCTGCTTCTTCTTaGGTTTTGACATGGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSSSQFDRAGSSLSNGTNLSASS*VLTWFL Trigger: TAGAAACCATGTCAAAACCAAAGAAGAAGCAGACAA...ATTCGTTCCATTTGATAGAGAGCTGCCAGCTCTGTCAAACTGTGAAGATGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| 3UTR TCA 72 bp | ACAGAGCTGGCAGCTCTCTATCAAATGGAACGAATCTaGTTTCAAAGAAAACAAGCAAATGCCAGCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TELAALYQMERI*FQRKQANASQE Trigger: TTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCATTTGATAGAGAGCTGCCAGCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPATGRCD*ESGRVG Trigger: CCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGT...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGTCACCTCTCGACTGCTCCCGGGAAGGACAAAAGCCTCCACCGAGTGCCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKVTSRLLPGRTKASTECPQYPG*PPSSHL Trigger: AAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGG...GCACTCGGTGGAGGCTTTTGTCCTTCCCGGGAGCAGTCGAGAGGTGACCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTTCAGGAGGGTGGGGCTaGAGGGCCTGGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQLWPTVSTPHEALLICVSGGWG*RAWAIP Trigger: CGGGATTGCCCAGGCCCTGCAGCCCCACCCTCCTGA...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTCAGGAGGGTGGGGCTaGAGGGCCTGGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWSGGWG*RAWAIP Trigger: CGGGATTGCCCAGGCCCTGCAGCCCCACCCTCCTGA...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTCAGGAGGGTGGGGCTaGAGGGCCTGGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRSGGWG*RAWAIP Trigger: CGGGATTGCCCAGGCCCTGCAGCCCCACCCTCCTGA...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPARNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLRNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPASPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCTGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPACLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLPSPALANRFHSSRGTFDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGCACTGCAGAGGGAGATaGCTGAGCAGCTTTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLHCRGR*LSSFGL Trigger: CAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTG...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233269.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KCQPRKSTAIVVCGGARHDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...ATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGTGGCCGGTCCAGGCTaGTCTCCTGGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWVAGPG*SPGRLI Trigger: TATGAGCCTCCCAGGAGATCAGCCTGGACCGGCCAC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTGGCCGGTCCAGGCTaGTCTCCTGGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLVAGPG*SPGRLI Trigger: TATGAGCCTCCCAGGAGATCAGCCTGGACCGGCCAC...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPASHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PAKKVHSHCGLWRGPPSLAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...CAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGGAGTTGGAGCTGTCTaGCAGGAGTTCGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPSPALANRFHSSRGTFGVGAV*QEFEQE Trigger: TTCCTGCTCGAACTCCTGTCAGACAGCTCCAACTCC...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLRNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFVATARRLYTVGKGLHTGRCD*ESGRVG Trigger: CCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGT...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ANASQESPQPLWSVEGPAEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...GGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCQPRKSTAIVVCGGARHEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...ATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFVATARRLYTVGKGLHDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEFVATARRLYTVGKGLHPQYPG*PPSSHL Trigger: AAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGG...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLPAEGL*DSSWMS Trigger: AGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGG...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AACTGGAGCCCACCTACCCACAATGCCTGTGTGGTCTCTGACCATGGTGGCTACCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NWSPPTHNACVVSDHGGYLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...GTAGCCACCATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQLWPTVSTPHEALLICVGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLGHMAG*EPSVRV Trigger: TACCCGAACACTAGGCTCCCAGCCAGCCATATGCCC...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWGHMAG*EPSVRV Trigger: TACCCGAACACTAGGCTCCCAGCCAGCCATATGCCC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTAAGGCCTCCTTAATATaGGCTGCTGGGTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QLPSPALANRFHSSRGTFKASLI*AAGSGT Trigger: TGTACCTGACCCAGCAGCTCATATTAAGGAGGCCTT...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGAAGGCCTCCTTAATATaGGCTGCTGGGTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLKASLI*AAGSGT Trigger: TGTACCTGACCCAGCAGCTCATATTAAGGAGGCCTT...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | TTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTGCAGAGGGAGATGGCTaGGCAGCTGGCCTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWSVEGPAISVFVCFFFGAEGDG*AAGLVV Trigger: TACAACTAGGCCAGCTGCTCAGCCATCTCCCTCTGC...ACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGAGTTGGAGCTGTCTaGCAGGAGTTCGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLGVGAV*QEFEQE Trigger: TTCCTGCTCGAACTCCTGTCAGACAGCTCCAACTCC...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGGGAGTTGGAGCTGTCTaGCAGGAGTTCGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLGVGAV*QEFEQE Trigger: TTCCTGCTCGAACTCCTGTCAGACAGCTCCAACTCC...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLRNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTGCAGAGGGAGATGGCTaGGCAGCTGTGTTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSAEGDG*AAVFLA Trigger: TGCCAGAAACACAGCTGCTCAGCCATCTCCCTCTGC...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171646.10 |
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| CDS-3UTR GCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSPQYPG*PPSSHL Trigger: AAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGG...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWSVEGPAISVFVCFFFGPQYPG*PPSSHL Trigger: AAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGG...ACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SHCGLWRGPPSLFLSASSSPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...AGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKCQPRKSTAIVVCGGARHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTTGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLWPTVSTPHEALLICVCLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGTGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLCLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATGCCGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: AQRSRLIKENWSPPTHNADLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...GGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLTGRCD*ESGRVG Trigger: CCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGT...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEFVATARRLYTVGKGLHEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AACGCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NAQRSRLIKENWSPPTHNRNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...ATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPSPALANRFHSSRGTFHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGTTCAGTTTTGGGCACTaGAGAGGGAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLFSFGH*RGRWLS Trigger: GCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAA...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTTCAGTTTTGGGCACTaGAGAGGGAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWFSFGH*RGRWLS Trigger: GCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAA...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSCLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLPAEGL*DSSWMS Trigger: AGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGG...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLSHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHCGLWRGPPSLFLSASSAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...AGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQLWPTVSTPHEALLICVAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
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Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRDLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWDLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
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Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSTGRCD*ESGRVG Trigger: CCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGT...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTTCCAGGCTGATCTCCTaGGAGGCTCATAAGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: QLPSPALANRFHSSRGTFSRLIS*EAHKVN Trigger: ATTTACCTTATGAGCCTCCCAGGAGATCAGCCTGGA...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCCATTCCAGGCTGATCTCCTaGGAGGCTCATAAGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: KCQPRKSTAIVVCGGARHSRLIS*EAHKVN Trigger: ATTTACCTTATGAGCCTCCCAGGAGATCAGCCTGGA...ATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCCACTGCAGAGGGAGATaGCTGAGCAGCTGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRHCRGR*LSSCVS Trigger: AGAAACACAGCTGCTCAGCCATCTCCCTCTGCAGTG...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171646.10 |
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| 3UTR CAA 72 bp | GCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTaGTGTTCGCTGAGTTTGTGGCGACTGCTAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ANRFHSSRGTFD*CSLSLWRLLGD Trigger: ATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | TTGGTCCCAAGGTGCCCTAAATTCAGCTGTGGTGGCTaGAGCAGCTGCCTTCTATCCTTTCCTTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPRCPKFSCGG*SSCLLSFPFLL Trigger: GAGGAGGAAAGGAAAGGATAGAAGGCAGCTGCTCAAGCCACCACAGCTGAATTTAGGGCACCTTGGGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGCCATTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTAAGGCCTCCTTAATATaGGCTGCTGGGTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHCGLWRGPPSLFLSASSKASLI*AAGSGT Trigger: TGTACCTGACCCAGCAGCTCATATTAAGGAGGCCTT...AGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTGCAGAGGGAGATGGCTaGGCAGCTGGCCTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSAEGDG*AAGLVV Trigger: TACAACTAGGCCAGCTGCTCAGCCATCTCCCTCTGC...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 |
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| CDS-3UTR TCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAAGAAACTGGAAGATGTaGCTGGGAGAGCGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLRNWKM*LGEREG Trigger: ACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCT...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTATCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLSPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACTCAGGAGGGTGGGGCTaGAGGGCCTGGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNESDFKENKQMPAKKVHSGGWG*RAWAIP Trigger: CGGGATTGCCCAGGCCCTGCAGCCCCACCCTCCTGA...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTATGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLCLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTCACCCCCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSHPLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGGGGGTG...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VVCGGARHLCFCLLLLWFDLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...AAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NRFHSSRGTFDLCSLSLWGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...CCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTAAGGCCTCCTTAATATaGGCTGCTGGGTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VVCGGARHLCFCLLLLWFKASLI*AAGSGT Trigger: TGTACCTGACCCAGCAGCTCATATTAAGGAGGCCTT...AAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PQLWPTVSTPHEALLICVEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | TCTGAATACTACTGCTCCCAGTCCTCCACAAATCTGTGTCCTTACAACACTGACGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEYYCSQSSTNLCPYNTDDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...GTCAGTGTTGTAAGGACACAGATTTGTGGAGGACTGGGAGCAGTAGTATTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGCTCCTTAATATGAGCTaGTGGGTCAGGTACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALANRFHSSRGTFDLCSLLLNMS*WVRYSL Trigger: CAGACTGTACCTGACCCAGCAGCTCATATTAAGGAG...CAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: AEFVATARRLYTVGKGLHHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTCAGGAGGGTGGGGCTaGAGGGCCTGGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYSGGWG*RAWAIP Trigger: CGGGATTGCCCAGGCCCTGCAGCCCCACCCTCCTGA...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTTGTCTTAGCCAGGTGTaGCGTTCCGTAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSCLSQV*RSVGTL Trigger: GAGTGTGCCTACGGAACGCCACACCTGGCTAAGACA...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: WSVEGPAISVFVCFFFGFIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...AAAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGGTCATCTTCACAGTTTGACAGAGCTGGCAGCTCTCTATCAAATGGAACGAATGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSSSQFDRAGSSLSNGTNGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...ATTCGTTCCATTTGATAGAGAGCTGCCAGCTCTGTCAAACTGTGAAGATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | AACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCACTGCAGAGGGAGATaGCTGAGCAGCTTTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRFHSSRGTFDLCSLSLWHCRGR*LSSFGL Trigger: CAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTG...CCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
||
| 3UTR CAA 72 bp | AAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATaGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQANASQESPQP*WSVEGPAISVF Trigger: AAAAACAGAGATGGCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGACAGCCAGTCCTGCTaGGGGACTCTGGGACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVDSQSC*GTLGLI Trigger: GATGAGTCCCAGAGTCCCTCAGCAGGACTGGCTGTC...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGTTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQLWPTVSTPHEALLFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCGTGGCCGGTCCAGGCTaGTCTCCTGGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTVAGPG*SPGRLI Trigger: TATGAGCCTCCCAGGAGATCAGCCTGGACCGGCCAC...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGGCTGTGTTTCTGGCATaGATTAACCGTGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWAVFLA*INRGEF Trigger: AAACTCTCCACGGTTAATGCATGCCAGAAACACAGC...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171646.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGCTTAATATGAGCTGCTaGGTCAGGTACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EFVATARRLYTVGKGLHLLNMSC*VRYSLD Trigger: ATCCAGACTGTACCTGACCCAGCAGCTCATATTAAG...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTAGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HYLRPLPWAVVLFGQAFLDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...TAGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRFHSSRGTFDLCSLSLWSHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...CCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCAGATGGCTGAGCAGCTaGCCTAGTTGTAATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRRWLSS*PSCNSL Trigger: CAAAGAATTACAACTAGGCCAGCTGCTCAGCCATCT...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSAGLQF*ALQREM Trigger: CATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGC...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | TCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTaGTGGCGACTGCTAGGCGATTGTACACTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSRGTFDLCSLS*WRLLGDCTLLG Trigger: TCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | TCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTaGTGTGTGGTGTGTCTTTGGCTGGCCGAGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCVCVCVCVCVC*CVVCLWLAEVN Trigger: GTTGACCTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACACACACACACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | TGTCTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGTTTGTGTGTGGTGTGTCTTTGGCTGGCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLCVCVCVCVC*FVCGVSLAGRG Trigger: ACCTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACACACACACACAAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVDAPSR*IPVWVR Trigger: CCGAACCCATACTGGAATTCACCGACTGGGGGCATC...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTCTGTGTTTCTGGCATaGATTAACCGTGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLWPTVSTPHEALLICVRSVFLA*INRGEF Trigger: AAACTCTCCACGGTTAATGCATGCCAGAAACACAGA...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233269.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTCTTAATATGAGCTGCTaGGTCAGGTACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LANRFHSSRGTFDLCSLSLNMSC*VRYSLD Trigger: ATCCAGACTGTACCTGACCCAGCAGCTCATATTAAG...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTCTTAATATGAGCTGCTaGGTCAGGTACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVCGGARHLCFCLLLLWFLNMSC*VRYSLD Trigger: ATCCAGACTGTACCTGACCCAGCAGCTCATATTAAG...AAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTCACTCAAATAGTGACTaGTCCTCGCTCACAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSVEGPAISVFVCFFFGFHSNSD*SSLTTD Trigger: GTCAGTTGTGAGCGAGGACCAGTCACTATTTGAGTG...AAAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | ACACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLLKATSLGSCSFWSSFSGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...AGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTAGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HYLRPLPWAVVLFGQAFLGRAGG*GDTKFI Trigger: GATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCC...TAGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGGTCAAGCTTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFGQAFLHTMSLTRVDHRGHMAG*EPSVRV Trigger: TACCCGAACACTAGGCTCCCAGCCAGCCATATGCCC...CCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAAGCTTGACCAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | CACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTAGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HYLRPLPWAVVLFGQAFLGHMAG*EPSVRV Trigger: TACCCGAACACTAGGCTCCCAGCCAGCCATATGCCC...TAGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | AACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGGAGCAGCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRFHSSRGTFDLCSLSLWEQLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGCTGCTC...CCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171646.10 |
||
| CDS-3UTR TCA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLWRLLGDCTLLGKASIWFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NRFHSSRGTFDLCSLSLWEVVEM*EKNVGI Trigger: AATGCCGACATTCTTCTCTCACATCTCCACTACCTC...CCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | GATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTGGAGTTGGAGCTGTCTaGCAGGAGTTCGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DFKENKQMPAKKVHSHCGGVGAV*QEFEQE Trigger: TTCCTGCTCGAACTCCTGTCAGACAGCTCCAACTCC...ACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGGAGTTGGAGCTGTCTaGCAGGAGTTCGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVGVGAV*QEFEQE Trigger: TTCCTGCTCGAACTCCTGTCAGACAGCTCCAACTCC...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTCTCCTTAATATGAGCTaGTGGGTCAGGTACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVPHSTVCTLLKATSLGSLLNMS*WVRYSL Trigger: CAGACTGTACCTGACCCAGCAGCTCATATTAAGGAG...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTACCTGTGTTTCTGGCATaGATTAACCGTGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLPVFLA*INRGEF Trigger: AAACTCTCCACGGTTAATGCATGCCAGAAACACAGG...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCCACCCCCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSHPLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGGGGGTG...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYTGRCD*ESGRVG Trigger: CCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGT...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | AACGCACAGCGTTCGCGACTCATTAAGGAAAACTGGAGCCCACCTACCCACAATTTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NAQRSRLIKENWSPPTHNFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...ATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAATGAGTCGCGAACGCTGTGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTGGTGCCTTCCCAGGTaGTGCAGTTGGAGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYWCLPR*CSWSWS Trigger: GCTCCAACTCCAACTGCATCACCTGGGAAGGCACCA...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTYNVFDKGGPQVICPCPQYPG*PPSSHL Trigger: AAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGG...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTSPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WNESDFKENKQMPAKKVHSPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTGATGGTGACCCTGGCTaGGGCTTGAGACAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFDGDPG*GLRQPV Trigger: GACTGGCTGTCTCAAGCCCCAGCCAGGGTCACCATC...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFKENKQMPAKKVHSHCGLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...ACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTAAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HYLRPLPWAVVLFGQAFLSHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...TAGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGCACCCCCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVHPLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGGGGGTG...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGATAGGAGCCCATGTATaGCAGGTCGGAGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LISKKTSKCQPRKSTAIVIGAHV*QVGGVL Trigger: AAGTACCCCTCCGACCTGCCATACATGGGCTCCTAT...CACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTTTGTTTGTGTGTGGTGTGTCTTaGGCTGGCCGAGGTCAACTCGTAGTGTATAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCLFVCGVS*AGRGQLVVYKC Trigger: GCATTTATACACTACGAGTTGACCTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTATTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACGAAGGGGAGTCTCTCTaGGGTAGTGGAGATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNESDFKENKQMPAKKVHEGESL*GSGDVR Trigger: TCTCACATCTCCACTACCTCAGAGAGACTCCCCTTC...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTGTTTGTGTGTGGTGTGTCTTTGGCTGGCCGAGCTAGTTGTAATTCTTTaGGTAGCTTCGGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCLCVVCLWLAELVVIL*VASGYT Trigger: AGTATATCCCGAAGCTACGCAAAGAATTACAACTAG...CTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTDLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFGHMAG*EPSVRV Trigger: TACCCGAACACTAGGCTCCCAGCCAGCCATATGCCC...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTCACTGCAGAGGGAGATaGCTGAGCAGCTTTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTYNVFDKGGPQVICPCHCRGR*LSSFGL Trigger: CAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTG...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | ACACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTCACCTTTGTTCACACTaGACTCATCAGGTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLKATSLGSCSFWSSFSHLCSH*THQVSS Trigger: GGAACTCACCTGATGAGTGCAGTGTGAACAAAGGTG...AGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFSPPCS*RSSSPQ Trigger: CTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCAGTTTTGGGCACTaGAGAGGGAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYFSFGH*RGRWLS Trigger: GCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAA...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSTYNVFDKGGPQVICPCPAEGL*DSSWMS Trigger: AGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGG...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYSHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | GGGTCATCTTCACAGTTTGACAGAGCTGGCAGCTCTCTATCAAATGGAACGAATTTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSQFDRAGSSLSNGTNFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...ATTCGTTCCATTTGATAGAGAGCTGCCAGCTCTGTCAAACTGTGAAGATGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | ACACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTCCTGTGTTTCTGGCATaGATTAACCGTGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLKATSLGSCSFWSSFSPVFLA*INRGEF Trigger: AAACTCTCCACGGTTAATGCATGCCAGAAACACAGG...AGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGGTGTGTCTTTGGCTGGCCGAGGTCAACTCGTAGTGTATAAATGCATACTAGTTGTAATTCTTTaGGTAGCTTCGGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: VCGVSLAGRGQLVVYKCILVVIL*VASGYT Trigger: AGTATATCCCGAAGCTACGCAAAGAATTACAACTAG...TATGCATTTATACACTACGAGTTGACCTCGGCCAGCCAAAGACACACCACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCTTCAGTTTTGGGCACTaGAGAGGGAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFFSFGH*RGRWLS Trigger: GCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAA...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTTTCAGTTTTGGGCACTaGAGAGGGAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFFSFGH*RGRWLS Trigger: GCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAA...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFPAEGL*DSSWMS Trigger: AGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGG...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFPAEGL*DSSWMS Trigger: AGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGG...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCCTCTGCGCTCATTTGTaGTCATATTGGGAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFLCAHL*SYWEAA Trigger: TGCCGCCTCCCAATATGACCACAAATGAGCGCAGAG...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTAGCCACTGTCGGACATaGTCTGTGCTCCACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFSHCRT*SVLHRV Trigger: TACTCTGTGGAGCACAGACCATGTCCGACAGTGGCT...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCACCCCCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFHPLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGGGGGTG...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCGATCTGGCCACTACCTaGATTAGCAAGGCGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VDHRLYVHVQYILSFFYFDLATT*ISKAAT Trigger: AGTAGCCGCCTTGCTAATCCAGGTAGTGGCCAGATC...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGTAAATCTGTGTTTCTaGCATGCATTAACCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKKTSKCQPRKSTAIVVCVNLCF*HALTVE Trigger: CTCCACGGTTAATGCATGCCAGAAACACAGATTTAC...ACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233269.2 |
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| CDS-3UTR CCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCTCCAGGCTGATCTCCTaGGAGGCTCATAAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTSRLIS*EAHKVN Trigger: ATTTACCTTATGAGCCTCCCAGGAGATCAGCCTGGA...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATCTCCTTAATATGAGCTaGTGGGTCAGGTACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYLLNMS*WVRYSL Trigger: CAGACTGTACCTGACCCAGCAGCTCATATTAAGGAG...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: RVDHRLYVHVQYILSFFYHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...ATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCCCTGTGTTTCTGGCATaGATTAACCGTGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTPVFLA*INRGEF Trigger: AAACTCTCCACGGTTAATGCATGCCAGAAACACAGG...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | GGTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCACCTTTGTTCACACTaGACTCATCAGGTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPQVICPCTVYFELLLFHLCSH*THQVSS Trigger: GGAACTCACCTGATGAGTGCAGTGTGAACAAAGGTG...AAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTCTTAATATGAGCTGCTaGGTCAGGTACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTYNVFDKGGPQVICPCLNMSC*VRYSLD Trigger: ATCCAGACTGTACCTGACCCAGCAGCTCATATTAAG...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR TCA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCTTCCCATCGATATTCTaGAATAGTAAGACGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QYILSFFYFCSNTWVAPTFPSIF*NSKTST Trigger: TGTGGACGTCTTACTATTTCAGAATATCGATGGGAA...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TTGGCTGGCCGAGGTCAACTCGTAGTGTATAAATGCATAAGTTATATAATTATTCATCCTTTGTCATCTTaGACAGCTCCTTCCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: LAGRGQLVVYKCISYIIIHPLSS*TAPSHR Trigger: TCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATG...AATAATTATATAACTTATGCATTTATACACTACGAGTTGACCTCGGCCAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACCTAGTTGTAATTCTTTaGGTAGCTTCGGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: WNESDFKENKQMPAKKVHLVVIL*VASGYT Trigger: AGTATATCCCGAAGCTACGCAAAGAATTACAACTAG...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTCTAGTTGTAATTCTTTaGGTAGCTTCGGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: FSTYNVFDKGGPQVICPCLVVIL*VASGYT Trigger: AGTATATCCCGAAGCTACGCAAAGAATTACAACTAG...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| 3UTR CAA 72 bp | ATTACAGAGTTAAAATTCAAGGCCACATCATATGTTTaGATTGTCTCTTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ITELKFKATSYV*IVSCVCVCVCV Trigger: CACACACACACACACACACACACAAGAGACAATCAAAACATATGATGTGGCCTTGAATTTTAACTCTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 90 bp | TGGGCACTGCAGAGGGAGATGGCTGAGCAGCTTTGGACTGAGGGGTaGGGTGGCTGTGGCCGGTCCAGGCTGATCTCCTGGGAGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WALQREMAEQLWTEG*GGCGRSRLISWEAH Trigger: ATGAGCCTCCCAGGAGATCAGCCTGGACCGGCCACAGCCACCTCACCCCTCAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS GCA 90 bp | TTGTGGTCATATTGGGAGGCGGCACATGCTTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAGTATCCGGGCTGCCCACCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LWSYWEAAHASPPCS*RSSSPQYPGCPPSS Trigger: GGAAGATGGTGGGCAGCCCGGATACTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGAAGCATGTGCCGCCTCCCAATATGACCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS GCA 90 bp | TCTCCTCCATGTAGCTGCCGTAGCTCATCCCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTTTGTTCACACTGCACTCATCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPCSCRSSSPQYPG*PPSSHLCSHCTHQV Trigger: CACCTGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 90 bp | CCAGGATCTGGTAAGGATCTAACTGAGGACGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATGGCTGAGCAGCTTTGGACTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGKDLTEDAGLQF*ALQREMAEQLWTEG Trigger: CCCCTCAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCGTCCTCAGTTAGATCCTTACCAGATCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCGCTGGAAGTCATCCTTaGTCATCTTGCACAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SKCQPRKSTAIVVCGGARAGSHP*SSCTAP Trigger: AGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGC...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTCGCTTCCCGTGCACCTaGGTCATGATGTTTTTGTCG | + |
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Preference number: 5 (lower is better) Translates to: QLPSPALANRFHSSRGTFRFPCT*VMMFLS Trigger: CGACAAAAACATCATGACCAAGGTGCACGGGAAGCG...AAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 90 bp | ATGGCTGGCTGGGAGCCTAGTGTTCGGGTAGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGGGGAAGCAAAGAAACTGGAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: MAGWEPSVRVDAPSR*IPVWVRGSKETGRC Trigger: ACATCTTCCAGTTTCTTTGCTTCCCCGAACCCATACTGGAATTCACCGACTGGGGGCATCTACCCGAACACTAGGCTCCCAGCCAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS GCA 90 bp | TCTGGGACTCATCTTGGATGTCTGGCCATAGTCACTGGAAGAGGATaGGGTCATCTCTGTCTTAGCCAGGTGTGGCGTTCCGTAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGTHLGCLAIVTGRG*GHLCLSQVWRSVGT Trigger: TGTGCCTACGGAACGCCACACCTGGCTAAGACAGAGATGACCGCATCCTCTTCCAGTGACTATGGCCAGACATCCAAGATGAGTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAGGGTTGCACTCCATCTaGATGGTGACCCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLGLHSI*MVTLAG Trigger: CCCAGCCAGGGTCACCATCAAGATGGAGTGCAACCC...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGGCCCGCACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKCQPRKSTAIVVCGGARTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...GCGGGCCCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGTCATCCTTTGTCATCTaGCACAGCTCCTTCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SFLPQLWPTVSTPHEALLSSFVI*HSSFPS Trigger: CGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGA...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGCGCTGGTCTTCAGTTTaGGGCACTGCAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLWRLLGDCTLLGKASIWRWSSV*GTAEGD Trigger: ATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCG...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGCGCTGGTCTTCAGTTTaGGGCACTGCAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EFVATARRLYTVGKGLHLRWSSV*GTAEGD Trigger: ATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCG...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 90 bp | GGTAGTGGAGATGTGAGAGAAGAATGTCGGCATTGTAGCTCGGCGTaGGCCGCTGGAAGTCATCCTTTGTCATCTTGCACAGCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGDVREECRHCSSA*AAGSHPLSSCTAPS Trigger: GGAAGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGCGGCTCACGCCGAGCTACAATGCCGACATTCTTCTCTCACATCTCCACTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 90 bp | ATTCCAGTATGGGTTCGGGGAAGCAAAGAAACTGGAAGATGTGACTaGGAGAGCGGGAGGGTGGGGAGACACAAAGTTCATCTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPVWVRGSKETGRCD*ESGRVGRHKVHLLG Trigger: CCCCAGAAGATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCTTTGCTTCCCCGAACCCATACTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 90 bp | CCAGGATCTGGTAAGGATCTAACTGAGGACGCTGGTCTTCAGTTTTaGGCACTGCAGAGGGAGATGGCTGAGCAGCTGTGTTTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGSGKDLTEDAGLQF*ALQREMAEQLCFWH Trigger: ATGCCAGAAACACAGCTGCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCGTCCTCAGTTAGATCCTTACCAGATCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171646.10 |
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| CDS-3UTR CAA 90 bp | AGCTTCCTTCCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLPQLWPTVSTPHEALLTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...CAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGGAAGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLWPTVSTPHEALLICVRSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLWRLLGDCTLLGKASIWSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...CCAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AEFVATARRLYTVGKGLHSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EFVATARRLYTVGKGLHLSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQLWPTVSTPHEALLICVSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...AACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCGCTTCCCGTGCACCTaGGTCATGATGTTTTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AEFVATARRLYTVGKGLHRFPCT*VMMFLS Trigger: CGACAAAAACATCATGACCAAGGTGCACGGGAAGCG...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGGCTGGAAGTCATCCTTaGTCATCTTGCACAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EFVATARRLYTVGKGLHLAGSHP*SSCTAP Trigger: AGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGC...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCGCTGGAAGTCATCCTTaGTCATCTTGCACAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLWPTVSTPHEALLICVRAGSHP*SSCTAP Trigger: AGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGC...GCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTCGCTGGTCTTCAGTTTaGGGCACTGCAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WSVEGPAISVFVCFFFGFRWSSV*GTAEGD Trigger: ATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCG...AAAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTTGTTTGTGTGTGGTGTGTCTTTGGCTGGCCGAGCGCTTCCCGTGCACCTaGGTCATGATGTTTTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLCVVCLWLAERFPCT*VMMFLS Trigger: CGACAAAAACATCATGACCAAGGTGCACGGGAAGCG...CTCGGCCAGCCAAAGACACACCACACACAAACAAACACACACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AEFVATARRLYTVGKGLHTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...ATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGTGGCGACTGCTAGGCGATTGTACACTGTTGGGAAAGGCCTCCATCTGACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EFVATARRLYTVGKGLHLTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...CAGATGGAGGCCTTTCCCAACAGTGTACAATCGCCTAGCAGTCGCCACAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCAACCGTTTCCACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTCATCCTTTGTCATCTaGCACAGCTCCTTCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LANRFHSSRGTFDLCSLSSSFVI*HSSFPS Trigger: CGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGA...ACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTGGAAACGGTTGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTCATCCTTTGTCATCTaGCACAGCTCCTTCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LWSVEGPAISVFVCFFFGSSFVI*HSSFPS Trigger: CGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGA...ACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTCGCTGGTCTTCAGTTTaGGGCACTGCAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVPHSTVCTLLKATSLGSRWSSV*GTAEGD Trigger: ATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCG...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTGTGGAGGGGCCCGCCATCTCTGTTTTTGTCTGCTTCTTCTTTGGTTTTGCTGGAAGTCATCCTTaGTCATCTTGCACAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSVEGPAISVFVCFFFGFAGSHP*SSCTAP Trigger: AGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGC...AAAACCAAAGAAGAAGCAGACAAAAACAGAGATGGCGGGCCCCTCCACAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTCGCTTCCCGTGCACCTaGGTCATGATGTTTTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KVPHSTVCTLLKATSLGSRFPCT*VMMFLS Trigger: CGACAAAAACATCATGACCAAGGTGCACGGGAAGCG...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCGGGTTGCACTCCATCTaGATGGTGACCCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QYILSFFYFCSNTWVAPTGLHSI*MVTLAG Trigger: CCCAGCCAGGGTCACCATCAAGATGGAGTGCAACCC...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TGGAACGAATCTGATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACGGGTTGCACTCCATCTaGATGGTGACCCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WNESDFKENKQMPAKKVHGLHSI*MVTLAG Trigger: CCCAGCCAGGGTCACCATCAAGATGGAGTGCAACCC...GTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATCAGATTCGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CACTCCTCACGAGGCACTTTTGATTTGTGTTCGCTGAGTTTGTGGCGACTGCTAACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSRGTFDLCSLSLWRLLTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...TAGCAGTCGCCACAAACTCAGCGAACACAAATCAAAAGTGCCTCGTGAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTTATATGTCCATGTGGGTTGCACTCCATCTaGATGGTGACCCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSTYNVFDKGGPQVICPCGLHSI*MVTLAG Trigger: CCCAGCCAGGGTCACCATCAAGATGGAGTGCAACCC...ACATGGACATATAACCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | TTAAGGAAAACTGGAGCCCACCTACCCACAATGCCTGTGTGGTCTCTGACCATGCCTAGTTGTAATTCTTaGCGTAGCTTCGGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRKTGAHLPTMPVWSLTMPSCNS*RSFGIY Trigger: GTATATCCCGAAGCTACGCAAAGAATTACAACTAGG...CATGGTCAGAGACCACACAGGCATTGTGGGTAGGTGGGCTCCAGTTTTCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCGCTGGTCTTCAGTTTaGGGCACTGCAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DFKENKQMPAKKVHSHCGRWSSV*GTAEGD Trigger: ATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCG...ACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GGTAGTTTCCCTTCAAATGACATCATACATGGTGTGTTAGGCCAAGTCTGTTCCCGCTTCCCGTGCACCTaGGTCATGATGTTTTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSFPSNDIIHGVLGQVCSRFPCT*VMMFLS Trigger: CGACAAAAACATCATGACCAAGGTGCACGGGAAGCG...GGAACAGACTTGGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCGGGTTGCACTCCATCTaGATGGTGACCCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDHRLYVHVQYILSFFYFGLHSI*MVTLAG Trigger: CCCAGCCAGGGTCACCATCAAGATGGAGTGCAACCC...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CTTTTTGGTCAAGCTTTTCTACATACAATGTCTTTGACAAGGGTGGACCACAGGTCACTCTGCGCTCATTaGTGGTCATATTGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFGQAFLHTMSLTRVDHRSLCAH*WSYWEA Trigger: CGCCTCCCAATATGACCACAAATGAGCGCAGAGTGA...CCTGTGGTCCACCCTTGTCAAAGACATTGTATGTAGAAAAGCTTGACCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTCTGTGGAGGGCCTAGTTGTAATTCTTaGCGTAGCTTCGGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: KTSKCQPRKSTAIVVCGGPSCNS*RSFGIY Trigger: GTATATCCCGAAGCTACGCAAAGAATTACAACTAGG...CCCTCCACAGACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113848.11 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GATTTCAAAGAAAACAAGCAAATGCCAGCCAAGAAAGTCCACAGCCATTGTGGTTCATCCTTTGTCATCTaGCACAGCTCCTTCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: DFKENKQMPAKKVHSHCGSSFVI*HSSFPS Trigger: CGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGA...ACCACAATGGCTGTGGACTTTCTTGGCTGGCATTTGCTTGTTTTCTTTGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CACTACTTAAGGCCACTTCCTTGGGCAGTTGTTCTTTTTGGTCAAGCTTTTCTAGCTGGAAGTCATCCTTaGTCATCTTGCACAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYLRPLPWAVVLFGQAFLAGSHP*SSCTAP Trigger: AGGAGCTGTGCAAGATGACAAAGGATGACTTCCAGC...TAGAAAAGCTTGACCAAAAAGAACAACTGCCCAAGGAAGTGGCCTTAAGTAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCCCACACTCTACAGTTTGTACACTACTTAAGGCCACTTCCTTGGGCAGTCCTAGTTGTAATTCTTaGCGTAGCTTCGGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: KVPHSTVCTLLKATSLGSPSCNS*RSFGIY Trigger: GTATATCCCGAAGCTACGCAAAGAATTACAACTAGG...ACTGCCCAAGGAAGTGGCCTTAAGTAGTGTACAAACTGTAGAGTGTGGGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 90 bp | AAGTCATCCTTTGTCATCTTGCACAGCTCCTTCCCATCGATATTCTaGAATAGTAAGACGTCCACATCGAGGAGGCCATATTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KSSFVILHSSFPSIF*NSKTSTSRRPYSFT Trigger: GGTGAAAGAATATGGCCTCCTCGATGTGGACGTCTTACTATTTCAGAATATCGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCACCATCTTCCCACCTTaGTTCACACTGCACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QYILSFFYFCSNTWVAPTTIFPP*FTLHSS Trigger: TGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGT...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | GTGGACCACAGGTTATATGTCCATGTACAGTATATTTTGAGCTTCTTCTATTTCTCATCCTTTGTCATCTaGCACAGCTCCTTCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: VDHRLYVHVQYILSFFYFSSFVI*HSSFPS Trigger: CGATGGGAAGGAGCTGTGCAAGATGACAAAGGATGA...GAAATAGAAGAAGCTCAAAATATACTGTACATGGACATATAACCTGTGGTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS-3UTR CAA 90 bp | CAGTATATTTTGAGCTTCTTCTATTTCTGTAGTAATACTTGGGTGGCACCCACCCCTAGTTGTAATTCTTaGCGTAGCTTCGGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: QYILSFFYFCSNTWVAPTPSCNS*RSFGIY Trigger: GTATATCCCGAAGCTACGCAAAGAATTACAACTAGG...GGTGGGTGCCACCCAAGTATTACTACAGAAATAGAAGAAGCTCAAAATATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113848.11 ENSMUST00000122199.10 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 72 bp | GTAGTAGGTGCCCAGGTGAGAGGGCATATGGCTGGCTaGGAGCCTAGTGTTCGGGTAGATGCCCCCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVGAQVRGHMAG*EPSVRVDAPSR Trigger: CCGACTGGGGGCATCTACCCGAACACTAGGCTCCCAGCCAGCCATATGCCCTCTCACCTGGGCACCTACTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS GCA 72 bp | TATTGGGAGGCGGCACATGCTTCTCCTCCATGTAGCTaGCGTAGCTCATCCCCACAGTATCCGGGCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: YWEAAHASPPCS*RSSSPQYPGCP Trigger: TGGGCAGCCCGGATACTGTGGGGATGAGCTACGGCAGCTACATGGAGGAGAAGCATGTGCCGCCTCCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 72 bp | CTGGGGCTTGAGACAGCCAGTCCTGCTGAGGGACTCTaGGACTCATCTTGGATGTCTGGCCATAGTCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLETASPAEGL*DSSWMSGHSHW Trigger: CCAGTGACTATGGCCAGACATCCAAGATGAGTCCCAGAGTCCCTCAGCAGGACTGGCTGTCTCAAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 72 bp | ACGCTGGTCTTCAGTTTTGGGCACTGCAGAGGGAGATaGCTGAGCAGCTTTGGACTGAGGGGTGAGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLVFSFGHCRGR*LSSFGLRGEVA Trigger: AGCCACCTCACCCCTCAGTCCAAAGCTGCTCAGCCATCTCCCTCTGCAGTGCCCAAAACTGAAGACCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233881.2 |
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| CDS GCA 72 bp | TGTAGCTGCCGTAGCTCATCCCCACAGTATCCGGGCTaGCCACCATCTTCCCACCTTTGTTCACACTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CSCRSSSPQYPG*PPSSHLCSHCT Trigger: AGTGCAGTGTGAACAAAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGGGGATGAGCTACGGCAGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CCA 72 bp | AAGAAACTGGAAGATGTGACTGGGAGAGCGGGAGGGTaGGGAGACACAAAGTTCATCTTCTGGGGGTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KKLEDVTGRAGG*GDTKFIFWGWA Trigger: CGCCCACCCCCAGAAGATGAACTTTGTGTCTCCCCACCCTCCCGCTCTCCCAGTCACATCTTCCAGTTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS GCA 72 bp | CCGGGCTGCCCACCATCTTCCCACCTTTGTTCACACTaGACTCATCAGGTGAGTTCCTGGAACCATTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PGCPPSSHLCSH*THQVSSWNHSP Trigger: AGGTGAATGGTTCCAGGAACTCACCTGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGTGGGCAGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS CAA 72 bp | CCCACAGTATCCGGGCTGCCCACCATCTTCCCACCTTaGTTCACACTGCACTCATCAGGTGAGTTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PTVSGLPTIFPP*FTLHSSGEFLE Trigger: TTCCAGGAACTCACCTGATGAGTGCAGTGTGAACAAAGGTGGGAAGATGGTGGGCAGCCCGGATACTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | TGGGAGCCTAGTGTTCGGGTAGATGCCCCCAGTCGGTaGATTCCAGTATGGGTTCGGGGAAGCAAAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: WEPSVRVDAPSR*IPVWVRGSKET Trigger: AGTTTCTTTGCTTCCCCGAACCCATACTGGAATTCACCGACTGGGGGCATCTACCCGAACACTAGGCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | CTGCACTCATCAGGTGAGTTCCTGGAACCATTCACCTaGCTAGGGTTGCACTCCATCTTGATGGTGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHSSGEFLEPFT*LGLHSILMVTL Trigger: CAGGGTCACCATCAAGATGGAGTGCAACCCTAGTCAGGTGAATGGTTCCAGGAACTCACCTGATGAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | ATGTGGAAGGGGAGTCTCTCTGAGGTAGTGGAGATGTaGGAGAAGAATGTCGGCATTGTAGCTCGGCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: MWKGSLSEVVEM*EKNVGIVARRE Trigger: CTCACGCCGAGCTACAATGCCGACATTCTTCTCTCACATCTCCACTACCTCAGAGAGACTCCCCTTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | GATGTGAGAGAAGAATGTCGGCATTGTAGCTCGGCGTaGGCCGCTGGAAGTCATCCTTTGTCATCTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: DVREECRHCSSA*AAGSHPLSSCT Trigger: TGTGCAAGATGACAAAGGATGACTTCCAGCGGCTCACGCCGAGCTACAATGCCGACATTCTTCTCTCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | CATCTTCCCACCTTTGTTCACACTGCACTCATCAGGTaGGTTCCTGGAACCATTCACCTGACTAGGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: HLPTFVHTALIR*VPGTIHLTRVA Trigger: TGCAACCCTAGTCAGGTGAATGGTTCCAGGAACTCACCTGATGAGTGCAGTGTGAACAAAGGTGGGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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| CDS TCA 72 bp | TTTGTCATCTTGCACAGCTCCTTCCCATCGATATTCTaGAATAGTAAGACGTCCACATCGAGGAGGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: FVILHSSFPSIF*NSKTSTSRRPY Trigger: ATATGGCCTCCTCGATGTGGACGTCTTACTATTTCAGAATATCGATGGGAAGGAGCTGTGCAAGATGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113848.11 ENSMUST00000121809.11 ENSMUST00000122199.10 ENSMUST00000171646.10 ENSMUST00000176345.10 ENSMUST00000233269.2 ENSMUST00000233664.2 ENSMUST00000233881.2 |
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