Pregenerated sensors for ERCC6L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021470Ensembl transcript IDs: ENSMUST00000067821.13, ENSMUST00000095724.11, ENSMUST00000142827.2, ENSMUST00000144763.2, ENSMUST00000159957.9
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAGTGGTCTGTTTCTTGAACCGCATGCTCCTGTGAGGTCCCACTaGCGTCCTGGGGAATTTCCTAGCTCTGCCTCCAGGGCTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KSGLFLEPHAPVRSH*RPGEFPSSASRASE Trigger: CTCTGAAGCCCTGGAGGCAGAGCTAGGAAATTCCCCAGGACGTCAGTGGGACCTCACAGGAGCATGCGGTTCAAGAAACAGACCACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | GGCACAGCCCAGTCCATGACACACCACAGCTCCTTCATGTTGTTCTaGAGGACAGTACCAGTGAGGCCAATGCGGACCTTACACTTCACA | + |
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Preference number: 1 (lower is better) Translates to: GTAQSMTHHSSFMLF*RTVPVRPMRTLHFT Trigger: TGTGAAGTGTAAGGTCCGCATTGGCCTCACTGGTACTGTCCTTCAGAACAACATGAAGGAGCTGTGGTGTGTCATGGACTGGGCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095724.11 ENSMUST00000142827.2 ENSMUST00000159957.9 |
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| 3UTR TCA 90 bp | GTTCTTGTGCTGAAGGTTCCCCTTTCAACCATGTTGTGGCTGTCATaGTGCCAGCTTCCACTTGGCCTTCCCTCTCCAGGATGTCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: VLVLKVPLSTMLWLS*CQLPLGLPSPGCLS Trigger: CGAGAGACATCCTGGAGAGGGAAGGCCAAGTGGAAGCTGGCATCATGACAGCCACAACATGGTTGAAAGGGGAACCTTCAGCACAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | AAGTCTTTTGACGAGCAGCCTGTCTGGCTTCTGCAGAAAGACACATaGGCTGCTCATCAGAACTTCCGTCACTGGGGACAGGGTTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: KSFDEQPVWLLQKDT*AAHQNFRHWGQGCH Trigger: ATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGCTCGTCAAAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | CACAGTCAGGTAACTAAGGCACAAGGTTCTCACTGTGTCACCCCGTaGGTTGGTCTTGTAACAACACTTTCTGCGCTTCTGGCCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: HSQVTKAQGSHCVTP*VGLVTTLSALLATA Trigger: GGCAGTGGCCAGAAGCGCAGAAAGTGTTGTTACAAGACCAACTCACGGGGTGACACAGTGAGAACCTTGTGCCTTAGTTACCTGACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR GCA 90 bp | GACACATGGGCTGCTCATCAGAACTTCCGTCACTGGGGACAGGGTTaGCATCGCCATCCTGGTCTGACTTATACTTTGCCTCAAACAACT | + |
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Preference number: 1 (lower is better) Translates to: DTWAAHQNFRHWGQG*HRHPGLTYTLPQTT Trigger: AGTTGTTTGAGGCAAAGTATAAGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR GCA 90 bp | ACAAACAGAGTCCCAAGTCTTTTGACGAGCAGCCTGTCTGGCTTCTaGAGAAAGACACATGGGCTGCTCATCAGAACTTCCGTCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: TNRVPSLLTSSLSGF*RKTHGLLIRTSVTG Trigger: CCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGCTCGTCAAAAGACTTGGGACTCTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | CTTCTGCAGAAAGACACATGGGCTGCTCATCAGAACTTCCGTCACTaGGGACAGGGTTGCCATCGCCATCCTGGTCTGACTTATACTTTG | + |
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Preference number: 1 (lower is better) Translates to: LLQKDTWAAHQNFRH*GQGCHRHPGLTYTL Trigger: CAAAGTATAAGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | ACTTGGCCTTCCCTCTCCAGGATGTCTCTCGTAAGACATGACCCTTaGGACCTTAGTTTGAAGAGGTTGTGGACACCAAAGAGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: TWPSLSRMSLVRHDP*DLSLKRLWTPKSSP Trigger: AGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGAGGGAAGGCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | CTGTGTGTCTCTGGCCATGTTCCACTGGGTCAGAAAATTGCTTCTTaGAGTGAATCCTGCTACCTAAAAGTCCTGGCACAGCCCAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: LCVSGHVPLGQKIAS*SESCYLKVLAQPSP Trigger: TGGACTGGGCTGTGCCAGGACTTTTAGGTAGCAGGATTCACTTCAAGAAGCAATTTTCTGACCCAGTGGAACATGGCCAGAGACACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR TCA 90 bp | TGCTTTCCAAAGGGAAGCTTCCAGCTCATCTTTCCTTTTGGAGGCTaGGGTACTGGGTGCTTTGGTACACAGCGTCTCTATCACTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: CFPKGSFQLIFPFGG*GTGCFGTQRLYHCQ Trigger: TTGGCAGTGATAGAGACGCTGTGTACCAAAGCACCCAGTACCTCAGCCTCCAAAAGGAAAGATGAGCTGGAAGCTTCCCTTTGGAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR GCA 90 bp | GTCTTAGAACTGCAAACAGCTACATTAGCAGGGAGCTGGGAAAACTaGTTCAACTCAAACACATCACGCGTTGCCCATCGGCTCATGTGG | + |
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Preference number: 1 (lower is better) Translates to: VLELQTATLAGSWEN*FNSNTSRVAHRLMW Trigger: CCACATGAGCCGATGGGCAACGCGTGATGTGTTTGAGTTGAAGCAGTTTTCCCAGCTCCCTGCTAATGTAGCTGTTTGCAGTTCTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | CTGAAGTACAAACAGAGTCCCAAGTCTTTTGACGAGCAGCCTGTCTaGCTTCTGCAGAAAGACACATGGGCTGCTCATCAGAACTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: LKYKQSPKSFDEQPV*LLQKDTWAAHQNFR Trigger: ACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGCTCGTCAAAAGACTTGGGACTCTGTTTGTACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | TGGATGGTCCAGGGGAGTCTTAAAAACGTGTTGGGCAAAGATGAATaGGGAGACTTGCAGCTGACTTGCGTTACTGGAACTCTCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: WMVQGSLKNVLGKDE*GDLQLTCVTGTLWT Trigger: AGTCCAGAGAGTTCCAGTAACGCAAGTCAGCTGCAAGTCTCCTCATTCATCTTTGCCCAACACGTTTTTAAGACTCCCCTGGACCATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144763.2 |
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| 3UTR GCA 90 bp | CAAACACATCACGCGTTGCCCATCGGCTCATGTGGTTCTCAGCTCTaGTTGAGCCGATCACATTCTGATTTGAGTGGATATAAGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: QTHHALPIGSCGSQL*LSRSHSDLSGYKPL Trigger: AAGTGGCTTATATCCACTCAAATCAGAATGTGATCGGCTCAAGCAGAGCTGAGAACCACATGAGCCGATGGGCAACGCGTGATGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | TCTGTCAAAGAACAATACACCATCCGGTCTTCTTTCTTAGGCAGCTaGCCCTTGATAAGAGTCTTGGTACGCCTGAGAAACCAGCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SVKEQYTIRSSFLGS*PLIRVLVRLRNQPD Trigger: GTCTGGCTGGTTTCTCAGGCGTACCAAGACTCTTATCAAGGGCCAGCTGCCTAAGAAAGAAGACCGGATGGTGTATTGTTCTTTGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR CCA 90 bp | CCAATGAGGAGAGGGCAGTGGCTGCCACTTGACTTTGGGGCATTCTaGAGTTTAAAAGTGGAAGGCTGTGTGTCGGTTATCTTTCAGATA | + |
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Preference number: 1 (lower is better) Translates to: PMRRGQWLPLDFGAF*SLKVEGCVSVIFQI Trigger: TATCTGAAAGATAACCGACACACAGCCTTCCACTTTTAAACTCCAGAATGCCCCAAAGTCAAGTGGCAGCCACTGCCCTCTCCTCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | GAACAACTTCACACCTCCAGGATGTCTCTCGTAAGACATGACCCTTaGGACCTTAGTTTGAAGAGGTTGTGGACACCAAAGAGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: EQLHTSRMSLVRHDP*DLSLKRLWTPKSSP Trigger: AGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGGTGTGAAGTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| 3UTR CCA 90 bp | GGTCCTGAAAGAACATTCTTTGGCAGCTGTGTGGGACCTTCCCCGTaGCTTTTAAAGAGGTCGTTAAGAATAGAGGTGTCACCAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GPERTFFGSCVGPSP*LLKRSLRIEVSPSK Trigger: CTTACTTGGTGACACCTCTATTCTTAACGACCTCTTTAAAAGCCACGGGGAAGGTCCCACACAGCTGCCAAAGAATGTTCTTTCAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | CATCTTTCTCCCGGACACCACCTGTTGAACGCCAAGGGTCAAAAGTaGAGTCACTTGCATCTCATCTCATCTAATAGTCACAAGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: HLSPGHHLLNAKGQK*SHLHLISSNSHKKQ Trigger: TTGCTTCTTGTGACTATTAGATGAGATGAGATGCAAGTGACTCCACTTTTGACCCTTGGCGTTCAACAGGTGGTGTCCGGGAGAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR GCA 90 bp | TCATGTTCTCGAGACACAAGAGATTTGGAACTGGTCCATTCCCTCTaGCACTGTTCTGTCTGTCATCACCATGATTTACTTTCACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SCSRDTRDLELVHSL*HCSVCHHHDLLSQG Trigger: ACCCTGTGAAAGTAAATCATGGTGATGACAGACAGAACAGTGGCAGAGGGAATGGACCAGTTCCAAATCTCTTGTGTCTCGAGAACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | TCTCTCGTAAGACATGACCCTTGGGACCTTAGTTTGAAGAGGTTGTaGACACCAAAGAGCTCTCCTCGATGTTCTTTTGATCCTTGTACT | + |
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Preference number: 1 (lower is better) Translates to: SLVRHDPWDLSLKRL*TPKSSPRCSFDPCT Trigger: AGTACAAGGATCAAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR TCA 90 bp | AATCTGGAAAATACCCGATCACATATCCTCTTGATAACTGTTTCCTaGTGTTTGGAGGTGCTAGCAGCCTGCAGCAGTGCAACATGGTTA | + |
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Preference number: 1 (lower is better) Translates to: NLENTRSHILLITVS*CLEVLAACSSATWL Trigger: TAACCATGTTGCACTGCTGCAGGCTGCTAGCACCTCCAAACATCAGGAAACAGTTATCAAGAGGATATGTGATCGGGTATTTTCCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR TCA 90 bp | TCACCTAACAGCAGCTTAAAGCGTATATGGTTCTTAGGGATTCTCTaGGTGGGATACTGTGTGGGAAAGATGACATCACTGTCTTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: SPNSSLKRIWFLGIL*VGYCVGKMTSLSSD Trigger: GTCAGAAGACAGTGATGTCATCTTTCCCACACAGTATCCCACTCAGAGAATCCCTAAGAACCATATACGCTTTAAGCTGCTGTTAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | GGAACTGGTCCATTCCCTCTGCCACTGTTCTGTCTGTCATCACCATaGTTTACTTTCACAGGGTTTTCTGCTTCAGAATCTTCAGATTCA | + |
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Preference number: 1 (lower is better) Translates to: GTGPFPLPLFCLSSP*FTFTGFSASESSDS Trigger: TGAATCTGAAGATTCTGAAGCAGAAAACCCTGTGAAAGTAAATCATGGTGATGACAGACAGAACAGTGGCAGAGGGAATGGACCAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | AAGACTGTTGTGGTATCCTTGGGTGTGTGGTCCTTTCTCTCACTGTaGAGCTCTTCAGTAAAGCTGACAGGTGATTTGTTAATCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: KTVVVSLGVWSFLSL*SSSVKLTGDLLISA Trigger: TGCAGAGATTAACAAATCACCTGTCAGCTTTACTGAAGAGCTTCACAGTGAGAGAAAGGACCACACACCCAAGGATACCACAACAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CCA 90 bp | CTCCTCGATGTTCTTTTGATCCTTGTACTGCTTCAAAGTATCGCTTaGCATTTTCACTTCCAACCACCACACAGTGAAGTTGCTGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LLDVLLILVLLQSIA*HFHFQPPHSEVAAC Trigger: ACAAGCAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR CCA 90 bp | GTATGGTTAGTACGATATACATCTTTCTTTTTCTGGACTACAGGGTaGGATACGTACAGAGGAGAGGAAATGCCTCCATCACTTGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: VWLVRYTSFFFWTTG*DTYRGEEMPPSLGG Trigger: ACCACCAAGTGATGGAGGCATTTCCTCTCCTCTGTACGTATCCCACCCTGTAGTCCAGAAAAAGAAAGATGTATATCGTACTAACCATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | TTTGAAGAGGTTGTGGACACCAAAGAGCTCTCCTCGATGTTCTTTTaGTCCTTGTACTGCTTCAAAGTATCGCTTGGCATTTTCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: FEEVVDTKELSSMFF*SLYCFKVSLGIFTS Trigger: GGAAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR GCA 90 bp | TCTATCACTGCCAAGTCAGTGAGTTTGCTGAGACTGTCATCATTCTaGTCATTCAAGATGTCCCAGAAATCTTTTGGTTTCTGCTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SITAKSVSLLRLSSF*SFKMSQKSFGFCFA Trigger: AGCAAAGCAGAAACCAAAAGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCACTGACTTGGCAGTGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | AACAGCTGTTTTCAAACTAATAAATCCCTCTCAACTCTGTCTGTCTaGAAATGCCCACGGAGGTCATATTATCTCACATGCAGATTGGAC | + |
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Preference number: 1 (lower is better) Translates to: NSCFQTNKSLSTLSV*KCPRRSYYLTCRLD Trigger: GTCCAATCTGCATGTGAGATAATATGACCTCCGTGGGCATTTTCAGACAGACAGAGTTGAGAGGGATTTATTAGTTTGAAAACAGCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067821.13 |
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| 3UTR TCA 90 bp | GTGGTCCTTTCTCTCACTGTGAAGCTCTTCAGTAAAGCTGACAGGTaGTTTGTTAATCTCTGCATCACTAGAAAATGTGTCTTCTCTATG | + |
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Preference number: 1 (lower is better) Translates to: VVLSLTVKLFSKADR*FVNLCITRKCVFSM Trigger: CATAGAGAAGACACATTTTCTAGTGATGCAGAGATTAACAAATCACCTGTCAGCTTTACTGAAGAGCTTCACAGTGAGAGAAAGGACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | GCCTTCATAACTTCTGTAACTCGGGCTTTTGGATTCTTGATTCTATaGGCTTCATCTACAATAATAGCTGACCATTCCAAACTCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: AFITSVTRAFGFLIL*ASSTIIADHSKLSA Trigger: AGCACTGAGTTTGGAATGGTCAGCTATTATTGTAGATGAAGCTCATAGAATCAAGAATCCAAAAGCCCGAGTTACAGAAGTTATGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142827.2 |
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| 3UTR TCA 90 bp | GCCTTCATAACTTCTGTAACTCGGGCTTTTGGATTCTTGATTCTATaGGCTTCATCTACAATAATAGCTGACCATTCCAAACTGTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: AFITSVTRAFGFLIL*ASSTIIADHSKLLS Trigger: GCTTAACAGTTTGGAATGGTCAGCTATTATTGTAGATGAAGCTCATAGAATCAAGAATCCAAAAGCCCGAGTTACAGAAGTTATGAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR TCA 90 bp | TCAAAATCCCTGAGTGATACTGTTAAACTGTACTTAAAACATTATTaGAGAGGTCACAGAACAACTTCACACCTCCAGGATGTCTCTCGT | + |
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Preference number: 1 (lower is better) Translates to: SKSLSDTVKLYLKHY*RGHRTTSHLQDVSR Trigger: ACGAGAGACATCCTGGAGGTGTGAAGTTGTTCTGTGACCTCTTCAATAATGTTTTAAGTACAGTTTAACAGTATCACTCAGGGATTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| 3UTR TCA 90 bp | TCTCTTAAATTTCAAGGAAGTAGTGGCTCTTTGCTTTCTTATTCTTaGCTTGGGGAACATGTCAATGTCATCAGACTCATCGCTAATATC | + |
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Preference number: 1 (lower is better) Translates to: SLKFQGSSGSLLSYS*LGEHVNVIRLIANI Trigger: GATATTAGCGATGAGTCTGATGACATTGACATGTTCCCCAAGTCAAGAATAAGAAAGCAAAGAGCCACTACTTCCTTGAAATTTAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGTTCCCAATGCCAATGAGGAGAGGGCAGTGGCTGCCACTTGACTTTGGGGAGGCCATACAGTACTaGTGCAGCACATCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SKFPMPMRRGQWLPLDFGEAIQY*CSTSSS Trigger: GCTGCTGGATGTGCTGCAGCAGTACTGTATGGCCTC...CCCAAAGTCAAGTGGCAGCCACTGCCCTCTCCTCATTGGCATTGGGAACTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCACCGACTCCTCATCACTGATGTCGCTGTAGAGCTCACAAACATCTGTGGGGTTGCTGTGTGTCTCTaGCCATGTTCCACTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: AHRLLITDVAVELTNICGVAVCL*PCSTGS Trigger: TGACCCAGTGGAACATGGCCAGAGACACACAGCAAC...CCCACAGATGTTTGTGAGCTCTACAGCGACATCAGTGATGAGGAGTCGGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CAA 90 bp | AGACACATGGGCTGCTCATCAGAACTTCCGTCACTGGGGACAGGGTaGCCATCGCCATCCTGGTCTGACTTATACTTTGCCTCAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: RHMGCSSELPSLGTG*PSPSWSDLYFASNN Trigger: GTTGTTTGAGGCAAAGTATAAGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGCTTCTGCAGAAAGACACATGGGCTGCTCATCAGAACTTCCGTCACTGGGCTCTGTCAACAGCTTaGAGATCGTTGGCTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: VWLLQKDTWAAHQNFRHWALSTA*RSLAGF Trigger: GAATCCAGCCAACGATCTTCAAGCTGTTGACAGAGC...CCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTTCCCAATGCCAATGAGGAGAGGGCAGTGGCTGCCACTTGACTTTGGGCAAAGTGAGCTGTGCTaGGAAGCCTGGAGTTCTACT | + |
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Preference number: 2 (lower is better) Translates to: SKFPMPMRRGQWLPLDFGQSELC*EAWSST Trigger: AGTAGAACTCCAGGCTTCCCAGCACAGCTCACTTTG...CCCAAAGTCAAGTGGCAGCCACTGCCCTCTCCTCATTGGCATTGGGAACTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CAA 90 bp | GCTTCCAGCTCATCTTTCCTTTTGGAGGCTGAGGTACTGGGTGCTTaGGTACACAGCGTCTCTATCACTGCCAAGTCAGTGAGTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ASSSSFLLEAEVLGA*VHSVSITAKSVSLL Trigger: CAGCAAACTCACTGACTTGGCAGTGATAGAGACGCTGTGTACCAAAGCACCCAGTACCTCAGCCTCCAAAAGGAAAGATGAGCTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CAA 90 bp | ACACATCACGCGTTGCCCATCGGCTCATGTGGTTCTCAGCTCTGCTaGAGCCGATCACATTCTGATTTGAGTGGATATAAGCCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: THHALPIGSCGSQLC*SRSHSDLSGYKPLP Trigger: AGGAAGTGGCTTATATCCACTCAAATCAGAATGTGATCGGCTCAAGCAGAGCTGAGAACCACATGAGCCGATGGGCAACGCGTGATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTAGCTACTTTCTGAAGCACAGTCAGGTAACTAAGGCACAAGGTTCTCACGCACAGCCCAGTCCATaGCACACCACAGCTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: MVSYFLKHSQVTKAQGSHAQPSP*HTTAPS Trigger: TGAAGGAGCTGTGGTGTGTCATGGACTGGGCTGTGC...GTGAGAACCTTGTGCCTTAGTTACCTGACTGTGCTTCAGAAAGTAGCTAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGCTGGGAAGCCTGGAGTTCTACTGGTGTCAGAGAATTTGTGTTTATCAGGCCATACAGTACTGCTaGAGCACATCCAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AVLGSLEFYWCQRICVYQAIQYC*STSSSL Trigger: CAAGCTGCTGGATGTGCTGCAGCAGTACTGTATGGC...CTGATAAACACAAATTCTCTGACACCAGTAGAACTCCAGGCTTCCCAGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR-3UTR TCA 90 bp | AAAGTATCGCTTGGCATTTTCACTTCCAACCACCACACAGTGAAGTTGCTGCTTGAAGGACAGTACCAGTaGGGCCAATGCGGACCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KVSLGIFTSNHHTVKLLLEGQYQ*GQCGPY Trigger: GTAAGGTCCGCATTGGCCTCACTGGTACTGTCCTTC...AAGCAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTAAAGAGGTCGTTAAGAATAGAGGTGTCACCAAGTAAGCCATCCTCAGGACCTGTGAGGTCCCACTaGCGTCCTGGGGAATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLKRSLRIEVSPSKPSSGPVRSH*RPGEFP Trigger: AGGAAATTCCCCAGGACGTCAGTGGGACCTCACAGG...TCCTGAGGATGGCTTACTTGGTGACACCTCTATTCTTAACGACCTCTTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | TTATCCAAAGATGGAGCAAGACATCTTTCTCCCGGACACCACCTGTaGAACGCCAAGGGTCAAAAGTGGAGTCACTTGCATCTCATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSKDGARHLSPGHHL*NAKGQKWSHLHLIS Trigger: TGAGATGAGATGCAAGTGACTCCACTTTTGACCCTTGGCGTTCAACAGGTGGTGTCCGGGAGAAAGATGTCTTGCTCCATCTTTGGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | CTCTCCAGGATGTCTCTCGTAAGACATGACCCTTGGGACCTTAGTTaGAAGAGGTTGTGGACACCAAAGAGCTCTCCTCGATGTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSRMSLVRHDPWDLS*KRLWTPKSSPRCSF Trigger: AAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | ACCTCCAGGATGTCTCTCGTAAGACATGACCCTTGGGACCTTAGTTaGAAGAGGTTGTGGACACCAAAGAGCTCTCCTCGATGTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TSRMSLVRHDPWDLS*KRLWTPKSSPRCSF Trigger: AAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
||
| 3UTR CAA 90 bp | AAAGAACAATACACCATCCGGTCTTCTTTCTTAGGCAGCTGGCCCTaGATAAGAGTCTTGGTACGCCTGAGAAACCAGCCAGACATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KEQYTIRSSFLGSWP*IRVLVRLRNQPDIF Trigger: AAAGATGTCTGGCTGGTTTCTCAGGCGTACCAAGACTCTTATCAAGGGCCAGCTGCCTAAGAAAGAAGACCGGATGGTGTATTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CAA 90 bp | GGTGCTTTGGTACACAGCGTCTCTATCACTGCCAAGTCAGTGAGTTaGCTGAGACTGTCATCATTCTGCTCATTCAAGATGTCCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GALVHSVSITAKSVS*LRLSSFCSFKMSQK Trigger: TTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCACTGACTTGGCAGTGATAGAGACGCTGTGTACCAAAGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCTCTTTGCTTTCTTATTCTTGACTTGGGGAACATGTCAATGTCATCAGACAGCCTGTCTGGCTTCTaGAGAAAGACACATGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VALCFLILDLGNMSMSSDSLSGF*RKTHGL Trigger: CAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCT...GTCTGATGACATTGACATGTTCCCCAAGTCAAGAATAAGAAAGCAAAGAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACCTCTGGGTGCTGAAGACTGTAGAAGTCTCTGAGCATTTTCTGTCGCTCAGTTTGAAGAGGTTGTaGACACCAAAGAGCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LYLWVLKTVEVSEHFLSLSLKRL*TPKSSP Trigger: AGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACT...GAGCGACAGAAAATGCTCAGAGACTTCTACAGTCTTCAGCACCCAGAGGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | GTCTCTGAGCATTTTCTGTCGCTCTTCAGATGTGGCCCTAGTAACTaGTTCAGCAAACTCCTTTACAGGCAGCTTATAGTAAGAGGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSEHFLSLFRCGPSN*FSKLLYRQLIVRGH Trigger: ATGGCCTCTTACTATAAGCTGCCTGTAAAGGAGTTTGCTGAACAAGTTACTAGGGCCACATCTGAAGAGCGACAGAAAATGCTCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | GCTCATTCAAGATGTCCCAGAAATCTTTTGGTTTCTGCTTTGCTTTaGCCACAGGTCCTGAAAGAACATTCTTTGGCAGCTGTGTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AHSRCPRNLLVSALL*PQVLKEHSLAAVWD Trigger: GTCCCACACAGCTGCCAAAGAATGTTCTTTCAGGACCTGTGGCAAAAGCAAAGCAGAAACCAAAAGATTTCTGGGACATCTTGAATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | CGATGTTCTTTTGATCCTTGTACTGCTTCAAAGTATCGCTTGGCATTTTCACTTGAAGGACAGTACCAGTaGGGCCAATGCGGACCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: RCSFDPCTASKYRLAFSLEGQYQ*GQCGPY Trigger: GTAAGGTCCGCATTGGCCTCACTGGTACTGTCCTTC...AAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CAA 90 bp | AGATCGTTGGCTGGATTCCAAGTTGGATCAAATAATATAACAACGTaGGCCCCAACAAAATTGAGACCTAGTCCACCAGCCATTGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RSLAGFQVGSNNITT*APTKLRPSPPAIVE Trigger: CTCCACAATGGCTGGTGGACTAGGTCTCAATTTTGTTGGGGCCAACGTTGTTATATTATTTGATCCAACTTGGAATCCAGCCAACGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CAA 90 bp | TGTCACCCTGTCCCATGCAATGATGTCCAGCTGTACGGTGATCCTTaGTCTCATCATCAGATTCAGAAGAAACATTCTGTTCTAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CHPVPCNDVQLYGDP*SHHQIQKKHSVLKS Trigger: AGACTTTAGAACAGAATGTTTCTTCTGAATCTGATGATGAGACAAAGGATCACCGTACAGCTGGACATCATTGCATGGGACAGGGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | ATCCTCAATAACCTGAGAGCTACGGTCTCCATCAGCTGCACACACTaGATTTGCTTCCTTTGCTGTTACAGGAGAATTATCAAGTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILNNLRATVSISCTH*ICFLCCYRRIIKFP Trigger: AGGAAACTTGATAATTCTCCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATGGAGACCGTAGCTCTCAGGTTATTGAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | CATTCTGCTCATTCAAGATGTCCCAGAAATCTTTTGGTTTCTGCTTaGCTTTTGCCACAGGTCCTGAAAGAACATTCTTTGGCAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HSAHSRCPRNLLVSA*LLPQVLKEHSLAAV Trigger: CACAGCTGCCAAAGAATGTTCTTTCAGGACCTGTGGCAAAAGCAAAGCAGAAACCAAAAGATTTCTGGGACATCTTGAATGAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | CATCGTCAACATCTGAGCTTAATGTCTTCCACAAAAACTTCTCGTTaGCTTTCCAAAGGGAAGCTTCCAGCTCATCTTTCCTTTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HRQHLSLMSSTKTSR*LSKGKLPAHLSFWR Trigger: CCTCCAAAAGGAAAGATGAGCTGGAAGCTTCCCTTTGGAAAGCAAACGAGAAGTTTTTGTGGAAGACATTAAGCTCAGATGTTGACGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTCCAATCCTATACGCTCTGTCAACAGCTTGAAGATCGTTGGCTGGATTCCCCATCTTCAGATAATTaGAAAGCACTAGCCAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TVQSYTLCQQLEDRWLDSPSSDN*KALAKD Trigger: ATCTTTGGCTAGTGCTTTTCAATTATCTGAAGATGG...GGAATCCAGCCAACGATCTTCAAGCTGTTGACAGAGCGTATAGGATTGGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGCTGCACACACTTGATTTGCTTCCTTTGCTGTTACAGGAGAATTATCAACTTGGGACCTTAGTTTaGAGAGGTTGTGGACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: HQLHTLDLLPLLLQENYQLGTLV*RGCGHQ Trigger: TTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAG...TTGATAATTCTCCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | AATGCGGACCTTACACTTCACAGCCTTCATAACTTCTGTAACTCGGGCTTTTGGATCTACAATAATAGCTaGCCATTCCAAACTCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: NADLTLHSLHNFCNSGFWIYNNS*PFQTQC Trigger: GCACTGAGTTTGGAATGGTCAGCTATTATTGTAGAT...CCAAAAGCCCGAGTTACAGAAGTTATGAAGGCTGTGAAGTGTAAGGTCCGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142827.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACCTCTGGGTGCTGAAGACTGTAGAAGTCTCTGAGCATTTTCTGTCGCTCCTTTTCTTGAAAGTCTaGATACAGGACAACTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LYLWVLKTVEVSEHFLSLLFLKV*IQDNCK Trigger: TTTGCAGTTGTCCTGTATCCAGACTTTCAAGAAAAG...GAGCGACAGAAAATGCTCAGAGACTTCTACAGTCTTCAGCACCCAGAGGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCTTCAAACTGCTTTCTGCGGATTCCTCTTGGTGTTTCTCCAATGATGAAGGCTCACAAACATCTGTaGGTTCTTGACAGTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: ISSNCFLRIPLGVSPMMKAHKHL*VLDSQG Trigger: ACCCTGACTGTCAAGAACCCACAGATGTTTGTGAGC...CTTCATCATTGGAGAAACACCAAGAGGAATCCGCAGAAAGCAGTTTGAAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTAAAGAGGTCGTTAAGAATAGAGGTGTCACCAAGTAAGCCATCCTCAGGAGAACTCCTTTACCTCTaGGTGCTGAAGACTGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLKRSLRIEVSPSKPSSGELLYL*VLKTVE Trigger: TTCTACAGTCTTCAGCACCCAGAGGTAAAGGAGTTC...TCCTGAGGATGGCTTACTTGGTGACACCTCTATTCTTAACGACCTCTTTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | GGCTCATGTGGTTCTCAGCTCTGCTTGAGCCGATCACATTCTGATTaGAGTGGATATAAGCCACTTCCTGAACACCATCTAATATTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: GSCGSQLCLSRSHSD*SGYKPLPEHHLIFY Trigger: ATAAAATATTAGATGGTGTTCAGGAAGTGGCTTATATCCACTCAAATCAGAATGTGATCGGCTCAAGCAGAGCTGAGAACCACATGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | GCAATGATGTCCAGCTGTACGGTGATCCTTTGTCTCATCATCAGATTCAGAAGAGGTATTGTCTTTTCTTaGAAGTCTGGATACAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: AMMSSCTVILCLIIRFRRGIVFS*KSGYRT Trigger: TGTCCTGTATCCAGACTTTCAAGAAAAGACAATACC...TCTTCTGAATCTGATGATGAGACAAAGGATCACCGTACAGCTGGACATCATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGTTTGCTGAGACTGTCATCATTCTGCTCATTCAAGATGTCCCAGAAATCTACATCTTTCTTTTTCTaGACTACAGGGTGGGATACG | + |
|
Preference number: 2 (lower is better) Translates to: VSLLRLSSFCSFKMSQKSTSFFF*TTGWDT Trigger: CGTATCCCACCCTGTAGTCCAGAAAAAGAAAGATGT...AGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTAAAGAGGTCGTTAAGAATAGAGGTGTCACCAAGTAAGCCATCCTCAGGAGATCACATTCTGATTTaGGTGGATATAAGCCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLKRSLRIEVSPSKPSSGDHILI*VDISHF Trigger: GAAGTGGCTTATATCCACTCAAATCAGAATGTGATC...TCCTGAGGATGGCTTACTTGGTGACACCTCTATTCTTAACGACCTCTTTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAGTCTGTCAAAGAACAATACACCATCCGGTCTTCTTTCTTAGGCAGCTGGAAAAGTGGAGTCACTTaGATCTCATCTCATCTAATA | + |
|
Preference number: 2 (lower is better) Translates to: WKSVKEQYTIRSSFLGSWKSGVT*ISSHLI Trigger: TATTAGATGAGATGAGATGCAAGTGACTCCACTTTT...CCAGCTGCCTAAGAAAGAAGACCGGATGGTGTATTGTTCTTTGACAGACTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 90 bp | TTTCCATCCACAGTAATAGATTTTATGCTTGCTTCACAAAGCTTTTaGTTATCCAAAGATGGAGCAAGACATCTTTCTCCCGGACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: FPSTVIDFMLASQSF*LSKDGARHLSPGHH Trigger: GTGGTGTCCGGGAGAAAGATGTCTTGCTCCATCTTTGGATAACAAAAAGCTTTGTGAAGCAAGCATAAAATCTATTACTGTGGATGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CCA 90 bp | CGATGTTCTTTTGATCCTTGTACTGCTTCAAAGTATCGCTTGGCATTTTCACTTTGTAACTCGGGCTTTTaGATTCTTGATTCTATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RCSFDPCTASKYRLAFSLCNSGF*ILDSMS Trigger: GCTCATAGAATCAAGAATCCAAAAGCCCGAGTTACA...AAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTCTTGTGGACAGATTTTATCAATTCTGAAGCAGAATTCACAAAGAACTCCTGGATACAGGACAACTaGAAAAGGTTTCCCATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFLWTDFINSEAEFTKNSWIQDN*KRFPIS Trigger: GGAAATGGGAAACCTTTTGCAGTTGTCCTGTATCCA...GGAGTTCTTTGTGAATTCTGCTTCAGAATTGATAAAATCTGTCCACAAGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | GCAGCCTGTCTGGCTTCTGCAGAAAGACACATGGGCTaGTCATCAGAACTTCCGTCACTGGGGACAGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AACLASAERHMG*SSELPSLGTGL Trigger: CAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AAAGACACATGGGCTGCTCATCAGAACTTCCGTCACTaGGGACAGGGTTGCCATCGCCATCCTGGTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: KDTWAAHQNFRH*GQGCHRHPGLT Trigger: AGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGACACATGGGCTGCTCATCAGAACTTCCGTCACTGGGGACAGGGTTGCTTGGCCCCAACAAAATaGAGACCTAGTCCACCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QKDTWAAHQNFRHWGQGCLAPTK*RPSPPA Trigger: GGCTGGTGGACTAGGTCTCAATTTTGTTGGGGCCAA...GCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | TGTCACCCCGTGAGTTGGTCTTGTAACAACACTTTCTaGGCTTCTGGCCACTGCCACAGGTACAAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CHPVSWSCNNTF*ASGHCHRYKAE Trigger: CTCAGCCTTGTACCTGTGGCAGTGGCCAGAAGCGCAGAAAGTGTTGTTACAAGACCAACTCACGGGGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR TCA 72 bp | TTTCTGCGCTTCTGGCCACTGCCACAGGTACAAGGCTaGGAGGATGTGAGGATCAGAGCCACATCTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FLRFWPLPQVQG*EDVRIRATSSV Trigger: AACAGAAGATGTGGCTCTGATCCTCACATCCTCTCAGCCTTGTACCTGTGGCAGTGGCCAGAAGCGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR TCA 72 bp | TCTTTCCCAGGGAATGGCCCACCGACTCCTCATCACTaGTGTCGCTGTAGAGCTCACAAACATCTGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SFPGNGPPTPHH*CRCRAHKHLWV Trigger: AACCCACAGATGTTTGTGAGCTCTACAGCGACATCAGTGATGAGGAGTCGGTGGGCCATTCCCTGGGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | CCCAATGCCAATGAGGAGAGGGCAGTGGCTGCCACTTaGCTTTGGGGCATTCTGGAGTTTAAAAGTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PNANEERAVAAT*LWGILEFKSGR Trigger: CCTTCCACTTTTAAACTCCAGAATGCCCCAAAGTCAAGTGGCAGCCACTGCCCTCTCCTCATTGGCATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | GTCCCAAGTCTTTTGACGAGCAGCCTGTCTGGCTTCTaGAGAAAGACACATGGGCTGCTCATCAGAACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLTSSLSGF*RKTHGLLIRTS Trigger: GGAAGTTCTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGCTCGTCAAAAGACTTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | TCTGGCCACTGCCACAGGTACAAGGCTGAGAGGATGTaGGGATCAGAGCCACATCTTCTGTTTCTAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: SGHCHRYKAERM*GSEPHLLFLTL Trigger: CAGTGTTAGAAACAGAAGATGTGGCTCTGATCCTCACATCCTCTCAGCCTTGTACCTGTGGCAGTGGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR GCA 72 bp | CACGCGTTGCCCATCGGCTCATGTGGTTCTCAGCTCTaGTTGAGCCGATCACATTCTGATTTGAGTGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: HALPIGSCGSQL*LSRSHSDLSGY Trigger: ATATCCACTCAAATCAGAATGTGATCGGCTCAAGCAGAGCTGAGAACCACATGAGCCGATGGGCAACGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | GGGAATTTCCTAGCTCTGCCTCCAGGGCTTCAGAGTTaGTGTTTGGACAGAAGACTGTTGTGGTATCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GNFLALPPGLQS*CLDRRLLWYPW Trigger: CCAAGGATACCACAACAGTCTTCTGTCCAAACAGCAACTCTGAAGCCCTGGAGGCAGAGCTAGGAAATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | CTTCCGTCACTGGGGACAGGGTTGCCATCGCCATCCTaGTCTGACTTATACTTTGCCTCAAACAACTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSLGTGLPSPS*SDLYFASNNLE Trigger: CTCTAAGTTGTTTGAGGCAAAGTATAAGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AAACAGAGTCCCAAGTCTTTTGACGAGCAGCCTGTCTaGCTTCTGCAGAAAGACACATGGGCTGCTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQSPKSFDEQPV*LLQKDTWAAHQ Trigger: CTGATGAGCAGCCCATGTGTCTTTCTGCAGAAGCCAGACAGGCTGCTCGTCAAAAGACTTGGGACTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AGAGGGCAGTGGCTGCCACTTGACTTTGGGGCATTCTaGAGTTTAAAAGTGGAAGGCTGTGTGTCGGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: RGQWLPLDFGAF*SLKVEGCVSVI Trigger: GATAACCGACACACAGCCTTCCACTTTTAAACTCCAGAATGCCCCAAAGTCAAGTGGCAGCCACTGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | CATCACTGTCTTCTGACTCTGTGTCACCCTGTCCCATaGAATGATGTCCAGCTGTACGGTGATCCTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HHCLLTLCHPVP*NDVQLYGDPLS Trigger: AGACAAAGGATCACCGTACAGCTGGACATCATTGCATGGGACAGGGTGACACAGAGTCAGAAGACAGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | CCCGGACACCACCTGTTGAACGCCAAGGGTCAAAAGTaGAGTCACTTGCATCTCATCTCATCTAATAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGHHLLNAKGQK*SHLHLISSNSH Trigger: GTGACTATTAGATGAGATGAGATGCAAGTGACTCCACTTTTGACCCTTGGCGTTCAACAGGTGGTGTCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | TCCCTCTCCAGGATGTCTCTCGTAAGACATGACCCTTaGGACCTTAGTTTGAAGAGGTTGTGGACACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSRMSLVRHDP*DLSLKRLWTPK Trigger: CTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | GGGCTTCAGAGTTGCTGTTTGGACAGAAGACTGTTGTaGTATCCTTGGGTGTGTGGTCCTTTCTCTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GLQSCCLDRRLL*YPWVCGPFSHC Trigger: ACAGTGAGAGAAAGGACCACACACCCAAGGATACCACAACAGTCTTCTGTCCAAACAGCAACTCTGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | CACACCTCCAGGATGTCTCTCGTAAGACATGACCCTTaGGACCTTAGTTTGAAGAGGTTGTGGACACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTSRMSLVRHDP*DLSLKRLWTPK Trigger: CTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACATCCTGGAGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGGCCAATGCGGACCTTACACTTCACAGCCTTCATAACTTCTGTAACTCGCATCAGTGGGGTGGTTaGTTCAGGAACATGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEANADLTLHSLHNFCNSHQWGG*FRNMAE Trigger: TTCTGCCATGTTCCTGAACAAACCACCCCACTGATG...CGAGTTACAGAAGTTATGAAGGCTGTGAAGTGTAAGGTCCGCATTGGCCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142827.2 |
||
| 3UTR TCA 72 bp | GTAACTAAGGCACAAGGTTCTCACTGTGTCACCCCGTaGGTTGGTCTTGTAACAACACTTTCTGCGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VTKAQGSHCVTP*VGLVTTLSALL Trigger: CAGAAGCGCAGAAAGTGTTGTTACAAGACCAACTCACGGGGTGACACAGTGAGAACCTTGTGCCTTAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR GCA 72 bp | GGTACTGGGTGCTTTGGTACACAGCGTCTCTATCACTaGCAAGTCAGTGAGTTTGCTGAGACTGTCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: GTGCFGTQRLYH*QVSEFAETVII Trigger: AATGATGACAGTCTCAGCAAACTCACTGACTTGGCAGTGATAGAGACGCTGTGTACCAAAGCACCCAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | GAACAATACACCATCCGGTCTTCTTTCTTAGGCAGCTaGCCCTTGATAAGAGTCTTGGTACGCCTGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EQYTIRSSFLGS*PLIRVLVRLRN Trigger: GTTTCTCAGGCGTACCAAGACTCTTATCAAGGGCCAGCTGCCTAAGAAAGAAGACCGGATGGTGTATTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGATGTCCAGCTGTACGGTGATCCTTTGTCTCATCATCAGATTCAGAAGACCCTTGATAAGAGTCTaGGTACGCCTGAGAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: AMMSSCTVILCLIIRFRRPLIRV*VRLRNQ Trigger: CTGGTTTCTCAGGCGTACCAAGACTCTTATCAAGGG...TCTTCTGAATCTGATGATGAGACAAAGGATCACCGTACAGCTGGACATCATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTTAGCTACTTTCTGAAGCACAGTCAGGTAACTAAGGCACAAGGTTCTCACCCCTTGATAAGAGTCTaGGTACGCCTGAGAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: MVSYFLKHSQVTKAQGSHPLIRV*VRLRNQ Trigger: CTGGTTTCTCAGGCGTACCAAGACTCTTATCAAGGG...GTGAGAACCTTGTGCCTTAGTTACCTGACTGTGCTTCAGAAAGTAGCTAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGCTGGGAAGCCTGGAGTTCTACTGGTGTCAGAGAATTTGTGTTTATCAGAACTCCTTCACAATCTaGAGCCTTTCCTCGGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: AVLGSLEFYWCQRICVYQNSFTI*SLSSDF Trigger: AAAGTCCGAGGAAAGGCTCAAGATTGTGAAGGAGTT...CTGATAAACACAAATTCTCTGACACCAGTAGAACTCCAGGCTTCCCAGCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGGTGCTGAAGACTGTAGAAGTCTCTGAGCATTTTCTGTCGCTCTTCAGAATCAGCTGCACACACTaGATTTGCTTCCTTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LWVLKTVEVSEHFLSLFRISCTH*ICFLCC Trigger: ACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGAT...TCTGAAGAGCGACAGAAAATGCTCAGAGACTTCTACAGTCTTCAGCACCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | AATACCCGATCACATATCCTCTTGATAACTGTTTCCTaGTGTTTGGAGGTGCTAGCAGCCTGCAGCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTRSHILLITVS*CLEVLAACSSA Trigger: TGCACTGCTGCAGGCTGCTAGCACCTCCAAACATCAGGAAACAGTTATCAAGAGGATATGTGATCGGGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR TCA 72 bp | CAGGGGAGTCTTAAAAACGTGTTGGGCAAAGATGAATaGGGAGACTTGCAGCTGACTTGCGTTACTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: QGSLKNVLGKDE*GDLQLTCVTGT Trigger: AGTTCCAGTAACGCAAGTCAGCTGCAAGTCTCCTCATTCATCTTTGCCCAACACGTTTTTAAGACTCCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144763.2 |
||
| 3UTR GCA 72 bp | ATCCTCAATAACCTGAGAGCTACGGTCTCCATCAGCTaGACACACTTGATTTGCTTCCTTTGCTGTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILNNLRATVSIS*THLICFLCCYR Trigger: CCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATGGAGACCGTAGCTCTCAGGTTATTGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AGTTGCTGTTTGGACAGAAGACTGTTGTGGTATCCTTaGGTGTGTGGTCCTTTCTCTCACTGTGAAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCCLDRRLLWYP*VCGPFSHCEAL Trigger: AAGAGCTTCACAGTGAGAGAAAGGACCACACACCCAAGGATACCACAACAGTCTTCTGTCCAAACAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AGAACATTCTTTGGCAGCTGTGTGGGACCTTCCCCGTaGCTTTTAAAGAGGTCGTTAAGAATAGAGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RTFFGSCVGPSP*LLKRSLRIEVS Trigger: TGACACCTCTATTCTTAACGACCTCTTTAAAAGCCACGGGGAAGGTCCCACACAGCTGCCAAAGAATGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | TACAGAGGAGAGGAAATGCCTCCATCACTTGGTGGTTaGTCTTTCTCTGTAGGTGACACTATGTTTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YRGEEMPPSLGG*SFSVGDTMFAF Trigger: GAAGGCAAACATAGTGTCACCTACAGAGAAAGATCAACCACCAAGTGATGGAGGCATTTCCTCTCCTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | CGAGACACAAGAGATTTGGAACTGGTCCATTCCCTCTaGCACTGTTCTGTCTGTCATCACCATGATTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: RDTRDLELVHSL*HCSVCHHHDLL Trigger: AAGTAAATCATGGTGATGACAGACAGAACAGTGGCAGAGGGAATGGACCAGTTCCAAATCTCTTGTGTCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AGACATGACCCTTGGGACCTTAGTTTGAAGAGGTTGTaGACACCAAAGAGCTCTCCTCGATGTTCTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RHDPWDLSLKRL*TPKSSPRCSFD Trigger: ATCAAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTTCAAACTGCTTTCTGCGGATTCCTCTTGGTGTTTCTCCAATGATGAAGCGCTCTGTCAACAGCTaGAAGATCGTTGGCTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: ISSNCFLRIPLGVSPMMKRSVNS*KIVGWI Trigger: AATCCAGCCAACGATCTTCAAGCTGTTGACAGAGCG...CTTCATCATTGGAGAAACACCAAGAGGAATCCGCAGAAAGCAGTTTGAAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | GTTGTGGACACCAAAGAGCTCTCCTCGATGTTCTTTTaGTCCTTGTACTGCTTCAAAGTATCGCTTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VVDTKELSSMFF*SLYCFKVSLGI Trigger: AATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR TCA 72 bp | AGCAGCTTAAAGCGTATATGGTTCTTAGGGATTCTCTaGGTGGGATACTGTGTGGGAAAGATGACATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLKRIWFLGIL*VGYCVGKMTSL Trigger: CAGTGATGTCATCTTTCCCACACAGTATCCCACTCAGAGAATCCCTAAGAACCATATACGCTTTAAGCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | CAAGTTTGTAAACAAATGTTCAGTGTGCCCCATACATaGACATCCATAGCCAGGGCCAGCAGCTCATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QVCKQMFSVPHT*TSIARASSSSI Trigger: TATTGATGAGCTGCTGGCCCTGGCTATGGATGTTCATGTATGGGGCACACTGAACATTTGTTTACAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | GTACGATATACATCTTTCTTTTTCTGGACTACAGGGTaGGATACGTACAGAGGAGAGGAAATGCCTCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VRYTSFFFWTTG*DTYRGEEMPPS Trigger: TGATGGAGGCATTTCCTCTCCTCTGTACGTATCCCACCCTGTAGTCCAGAAAAAGAAAGATGTATATCGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTTGCTGAGACTGTCATCATTCTGCTCATTCAAGATGTCCCAGAAATCTCTTAGTTTGAAGAGGTaGTGGACACCAAAGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VSLLRLSSFCSFKMSQKSLSLKR*WTPKSS Trigger: AGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAG...AGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | CTTTACCTCTGGGTGCTGAAGACTGTAGAAGTCTCTGAGCATTTTCTGTCGCTCTTTGCTTTCTTATTCTaGACTTGGGGAACATGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LYLWVLKTVEVSEHFLSLFAFLF*TWGTCQ Trigger: TTGACATGTTCCCCAAGTCAAGAATAAGAAAGCAAA...GAGCGACAGAAAATGCTCAGAGACTTCTACAGTCTTCAGCACCCAGAGGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | GCCAAGTCAGTGAGTTTGCTGAGACTGTCATCATTCTaGTCATTCAAGATGTCCCAGAAATCTTTTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AKSVSLLRLSSF*SFKMSQKSFGF Trigger: GAAACCAAAAGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCACTGACTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | TTAATGGCACGTCCATGTCCTACTCTCTCTCTGTATTaGTTATGCTTTCATCGTCAACATCTGAGCTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LMARPCPTLSLY*LCFHRQHLSLM Trigger: CATTAAGCTCAGATGTTGACGATGAAAGCATAAGCAATACAGAGAGAGAGTAGGACATGGACGTGCCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | GTTCTTTTGATCCTTGTACTGCTTCAAAGTATCGCTTaGCATTTTCACTTCCAACCACCACACAGTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLILVLLQSIA*HFHFQPPHSEV Trigger: AACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CCA 72 bp | GTAGTATGGTTAGTACGATATACATCTTTCTTTTTCTaGACTACAGGGTGGGATACGTACAGAGGAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VVWLVRYTSFFF*TTGWDTYRGEE Trigger: TTCCTCTCCTCTGTACGTATCCCACCCTGTAGTCCAGAAAAAGAAAGATGTATATCGTACTAACCATACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTTGCTGAGACTGTCATCATTCTGCTCATTCAAGATGTCCCAGAAATCTGCTTCACAAAGCTTTTaGTTATCCAAAGATGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSLLRLSSFCSFKMSQKSASQSF*LSKDGA Trigger: TGCTCCATCTTTGGATAACAAAAAGCTTTGTGAAGC...AGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTTGCTGAGACTGTCATCATTCTGCTCATTCAAGATGTCCCAGAAATCTCGATCACATTCTGATTaGAGTGGATATAAGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLLRLSSFCSFKMSQKSRSHSD*SGYKPL Trigger: AAGTGGCTTATATCCACTCAAATCAGAATGTGATCG...AGATTTCTGGGACATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | GTCTCCATCAGCTGCACACACTTGATTTGCTTCCTTTaGTGTTACAGGAGAATTATCAAGTTTCCTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSISCTHLICFL*CYRRIIKFPFV Trigger: AACAAAAGGAAACTTGATAATTCTCCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATGGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | CGATGTTCTTTTGATCCTTGTACTGCTTCAAAGTATCGCTTGGCATTTTCACTTCAAAAGTGGAGTCACTaGCATCTCATCTCATCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RCSFDPCTASKYRLAFSLQKWSH*HLISSN Trigger: ATTAGATGAGATGAGATGCAAGTGACTCCACTTTTG...AAGTGAAAATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CCA 72 bp | AAGTCTTTGAAGAGGTATTGTCTTTTCTTGAAAGTCTaGATACAGGACAACTGCAAAAGGTTTCCCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSLKRYCLFLKV*IQDNCKRFPIS Trigger: GGAAATGGGAAACCTTTTGCAGTTGTCCTGTATCCAGACTTTCAAGAAAAGACAATACCTCTTCAAAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCACAAAATCTGGGAATCTGGAAAATACCCGATCACATATCCTCTTGATAACTAAAAGGAAACGCCAATaGTATTTCAAAATCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CTKSGNLENTRSHILLITKRKRQ*YFKIPE Trigger: CTCAGGGATTTTGAAATACAATTGGCGTTTCCTTTT...AGTTATCAAGAGGATATGTGATCGGGTATTTTCCAGATTCCCAGATTTTGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
||
| 3UTR TCA 72 bp | ATTCTTGATTCTATGAGCTTCATCTACAATAATAGCTaGCCATTCCAAACTGTTAAGCTCCTCCAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: ILDSMSFIYNNS*PFQTVKLLQTQ Trigger: TTGTGTCTGGAGGAGCTTAACAGTTTGGAATGGTCAGCTATTATTGTAGATGAAGCTCATAGAATCAAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | GACAAGCTGATTTTATCTTTTACAGTTTCTGCTCTGTaGCTTAGTTTAGTGAAACTCAAGTGGCTGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DKLILSFTVSAL*LSLVKLKWLRD Trigger: ATCTCTCAGCCACTTGAGTTTCACTAAACTAAGTCACAGAGCAGAAACTGTAAAAGATAAAATCAGCTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR GCA 72 bp | TATTGTCTTTTCTTGAAAGTCTGGATACAGGACAACTaGAAAAGGTTTCCCATTTCCATCCACAGTAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: YCLFLKVWIQDN*KRFPISIHSNR Trigger: TCTATTACTGTGGATGGAAATGGGAAACCTTTTGCAGTTGTCCTGTATCCAGACTTTCAAGAAAAGACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR TCA 72 bp | ATTCTTGATTCTATGAGCTTCATCTACAATAATAGCTaGCCATTCCAAACTCAGTGCTTCTTGAAACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILDSMSFIYNNS*PFQTQCFLKLV Trigger: AACAAGTTTCAAGAAGCACTGAGTTTGGAATGGTCAGCTATTATTGTAGATGAAGCTCATAGAATCAAGAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142827.2 |
||
| 3UTR CAA 72 bp | GGCTGCTCATCAGAACTTCCGTCACTGGGGACAGGGTaGCCATCGCCATCCTGGTCTGACTTATACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSELPSLGTG*PSPSWSDLYFA Trigger: GGCAAAGTATAAGTCAGACCAGGATGGCGATGGCAACCCTGTCCCCAGTGACGGAAGTTCTGATGAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | TACACCATCCGGTCTTCTTTCTTAGGCAGCTGGCCCTaGATAAGAGTCTTGGTACGCCTGAGAAACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YTIRSSFLGSWP*IRVLVRLRNQP Trigger: TGGCTGGTTTCTCAGGCGTACCAAGACTCTTATCAAGGGCCAGCTGCCTAAGAAAGAAGACCGGATGGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CAA 72 bp | GCTGGGAAGCCTGGAGTTCTACTGGTGTCAGAGAATTaGTGTTTATCAGTCTTTCCCAGGGAATGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGKPGVLLVSEN*CLSVFPREWPT Trigger: GGTGGGCCATTCCCTGGGAAAGACTGATAAACACAAATTCTCTGACACCAGTAGAACTCCAGGCTTCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | GGGGAATTTCCTAGCTCTGCCTCCAGGGCTTCAGAGTaGCTGTTTGGACAGAAGACTGTTGTGGTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEFPSSASRASE*LFGQKTVVVSL Trigger: CAAGGATACCACAACAGTCTTCTGTCCAAACAGCAACTCTGAAGCCCTGGAGGCAGAGCTAGGAAATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | TCATCTTTCCTTTTGGAGGCTGAGGTACTGGGTGCTTaGGTACACAGCGTCTCTATCACTGCCAAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFLLEAEVLGA*VHSVSITAKSV Trigger: CACTGACTTGGCAGTGATAGAGACGCTGTGTACCAAAGCACCCAGTACCTCAGCCTCCAAAAGGAAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | ATGTCTCTCGTAAGACATGACCCTTGGGACCTTAGTTaGAAGAGGTTGTGGACACCAAAGAGCTCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSLVRHDPWDLS*KRLWTPKSSPR Trigger: TCGAGGAGAGCTCTTTGGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAGAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| CDS-3UTR TCA 90 bp | ACCATCCGGTCTTCTTTCTTAGGCAGCTGGCCCTTGATAAGAGTCTTGGTACGCGGTATTGTCTTTTCTTaGAAGTCTGGATACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TIRSSFLGSWPLIRVLVRGIVFS*KSGYRT Trigger: TGTCCTGTATCCAGACTTTCAAGAAAAGACAATACC...GCGTACCAAGACTCTTATCAAGGGCCAGCTGCCTAAGAAAGAAGACCGGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
||
| 3UTR CAA 72 bp | CAGATTTTGAGGTCATGTTCTCGAGACACAAGAGATTaGGAACTGGTCCATTCCCTCTGCCACTGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QILRSCSRDTRD*ELVHSLCHCSV Trigger: GACAGAACAGTGGCAGAGGGAATGGACCAGTTCCAAATCTCTTGTGTCTCGAGAACATGACCTCAAAATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | GGTTGTGGACACCAAAGAGCTCTCCTCGATGTTCTTTaGATCCTTGTACTGCTTCAAAGTATCGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCGHQRALLDVL*ILVLLQSIAWH Trigger: ATGCCAAGCGATACTTTGAAGCAGTACAAGGATCAAAAGAACATCGAGGAGAGCTCTTTGGTGTCCACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
||
| 3UTR CAA 72 bp | AACCTGAGAGCTACGGTCTCCATCAGCTGCACACACTaGATTTGCTTCCTTTGCTGTTACAGGAGAATTATC | + |
|
Preference number: 4 (lower is better) Translates to: NLRATVSISCTH*ICFLCCYRRII Trigger: GATAATTCTCCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATGGAGACCGTAGCTCTCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
||
| 3UTR CAA 72 bp | GGTTCTCAGCTCTGCTTGAGCCGATCACATTCTGATTaGAGTGGATATAAGCCACTTCCTGAACACCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLCLSRSHSD*SGYKPLPEHHL Trigger: TAGATGGTGTTCAGGAAGTGGCTTATATCCACTCAAATCAGAATGTGATCGGCTCAAGCAGAGCTGAGAACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CAA 72 bp | GTACACAGCGTCTCTATCACTGCCAAGTCAGTGAGTTaGCTGAGACTGTCATCATTCTGCTCATTCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: VHSVSITAKSVS*LRLSSFCSFKM Trigger: CATCTTGAATGAGCAGAATGATGACAGTCTCAGCAAACTCACTGACTTGGCAGTGATAGAGACGCTGTGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| CDS-3UTR GCA 90 bp | ACATATCCTCTTGATAACTGTTTCCTGATGTTTGGAGGTGCTAGCAGCCTGCAGTGGATACAGGACAACTaGAAAAGGTTTCCCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TYPLDNCFLMFGGASSLQWIQDN*KRFPIS Trigger: GGAAATGGGAAACCTTTTGCAGTTGTCCTGTATCCA...CTGCAGGCTGCTAGCACCTCCAAACATCAGGAAACAGTTATCAAGAGGATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGCCAATGCGGACCTTACACTTCACAGCCTTCATAACTTCTGTAACTCGGCTTTTCTTGAAAGTCTaGATACAGGACAACTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VRPMRTLHFTAFITSVTRLFLKV*IQDNCK Trigger: TTTGCAGTTGTCCTGTATCCAGACTTTCAAGAAAAG...CCGAGTTACAGAAGTTATGAAGGCTGTGAAGTGTAAGGTCCGCATTGGCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| 3UTR CAA 72 bp | GCTGGATTCCAAGTTGGATCAAATAATATAACAACGTaGGCCCCAACAAAATTGAGACCTAGTCCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AGFQVGSNNITT*APTKLRPSPPA Trigger: GGCTGGTGGACTAGGTCTCAATTTTGTTGGGGCCAACGTTGTTATATTATTTGATCCAACTTGGAATCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR CAA 72 bp | GAGAGCTACGGTCTCCATCAGCTGCACACACTTGATTaGCTTCCTTTGCTGTTACAGGAGAATTATCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: ESYGLHQLHTLD*LPLLLQENYQV Trigger: AACTTGATAATTCTCCTGTAACAGCAAAGGAAGCAAATCAAGTGTGTGCAGCTGATGGAGACCGTAGCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| CDS-3UTR CCA 90 bp | CTTCATGTTGTTCTGAAGGACAGTACCAGTGAGGCCAATGCGGACCTTACACTTTTTGTTATCCAAAGATaGAGCAAGACATCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LHVVLKDSTSEANADLTLFVIQR*SKTSFS Trigger: GGAGAAAGATGTCTTGCTCCATCTTTGGATAACAAA...AAGTGTAAGGTCCGCATTGGCCTCACTGGTACTGTCCTTCAGAACAACATGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| 3UTR CAA 72 bp | GGATCAAATAATATAACAACGTTGGCCCCAACAAAATaGAGACCTAGTCCACCAGCCATTGTGGAGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSNNITTLAPTK*RPSPPAIVETR Trigger: TCTTGTCTCCACAATGGCTGGTGGACTAGGTCTCAATTTTGTTGGGGCCAACGTTGTTATATTATTTGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095724.11 ENSMUST00000159957.9 |
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| 3UTR CAA 72 bp | CATCTGAGCTTAATGTCTTCCACAAAAACTTCTCGTTaGCTTTCCAAAGGGAAGCTTCCAGCTCATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HLSLMSSTKTSR*LSKGKLPAHLS Trigger: GGAAAGATGAGCTGGAAGCTTCCCTTTGGAAAGCAAACGAGAAGTTTTTGTGGAAGACATTAAGCTCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| 3UTR CAA 72 bp | GTTAATGGCACGTCCATGTCCTACTCTCTCTCTGTATaGCTTATGCTTTCATCGTCAACATCTGAGCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: VNGTSMSYSLSV*LMLSSSTSELN Trigger: ATTAAGCTCAGATGTTGACGATGAAAGCATAAGCAATACAGAGAGAGAGTAGGACATGGACGTGCCATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| CDS-3UTR TCA 90 bp | TTCAAAGTATCGCTTGGCATTTTCACTTCCAACCACCACACAGTGAAGTTGCTGCCATCTTCAGATAATTaGAAAGCACTAGCCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FKVSLGIFTSNHHTVKLLPSSDN*KALAKD Trigger: ATCTTTGGCTAGTGCTTTTCAATTATCTGAAGATGG...CAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATACTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| CDS-3UTR CAA 90 bp | ACTGTCCAATCCTATACGCTCTGTCAACAGCTTGAAGATCGTTGGCTGGATTCCGGACACCACCTGTCTTaGCGGGAGTCTGCGCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: TVQSYTLCQQLEDRWLDSGHHLS*RESARD Trigger: GTCCCGCGCAGACTCCCGCAAAGACAGGTGGTGTCC...GGAATCCAGCCAACGATCTTCAAGCTGTTGACAGAGCGTATAGGATTGGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| CDS-3UTR CAA 90 bp | ACTTGTCGTAAGTACATGATCTCCTCCACTGTGCCCAAGGATATTAGCCTAAGCGCTTCACAAAGCTTTTaGTTATCCAAAGATGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: TCRKYMISSTVPKDISLSASQSF*LSKDGA Trigger: TGCTCCATCTTTGGATAACAAAAAGCTTTGTGAAGC...GCTTAGGCTAATATCCTTGGGCACAGTGGAGGAGATCATGTACTTACGACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCTACTTTCTGAAGCACAGTCAGGTAACTAAGGCACAAGGTTCTCACGTCTTTGAAGAGGTATaGTCTTTTCTTGAAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: MVSYFLKHSQVTKAQGSHVFEEV*SFLESL Trigger: CAGACTTTCAAGAAAAGACAATACCTCTTCAAAGAC...GTGAGAACCTTGTGCCTTAGTTACCTGACTGTGCTTCAGAAAGTAGCTAACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159957.9 |
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| CDS GCA 72 bp | GCCTGCGCAGAGGCGCGAGCTCGGAGCTCATACCTTTaGGGGAGTCTGCGCGGGACTGCGGGGCGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: ACAEARARSSYL*GSLRGTAGRRC Trigger: ACATCTCCGCCCCGCAGTCCCGCGCAGACTCCCGCAAAGGTATGAGCTCCGAGCTCGCGCCTCTGCGCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| CDS TCA 72 bp | ACAGGAAGCACGCGGGAGCCGCTTCCGGAAGTGCCCTaGAGACGTGTGCCTGCGCAGAGGCGCGAGCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: TGSTREPLPEVP*RRVPAQRRELG Trigger: TCCGAGCTCGCGCCTCTGCGCAGGCACACGTCTTCAGGGCACTTCCGGAAGCGGCTCCCGCGTGCTTCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095724.11 |
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| CDS CAA 72 bp | TCAAGATGCGTGTTCATGGTGAGAACTGCAGAATGTTaGCCTGTTAAGCTCCTCCAGACACAAGCGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SRCVFMVRTAEC*PVKLLQTQAQC Trigger: ACACTGCGCTTGTGTCTGGAGGAGCTTAACAGGCAAACATTCTGCAGTTCTCACCATGAACACGCATCTTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144763.2 |
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