Pregenerated sensors for EPX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052234Ensembl transcript IDs: ENSMUST00000049768.4
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTCCCGCAGTGTCTTGCTaGGACCTCAAAGCCTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: GPKEDGGWLRGRIVSSSCPAVSC*DLKASW Trigger: CCATGAGGCTTTGAGGTCCCAGCAAGACACTGCGGG...ACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| 3UTR CCA 72 bp | GAGTGCTGCTGTTCCTTCAGGTCCCAAGGAAGATGGTaGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ECCCSFRSQGRW*MAKRQDCELFL Trigger: CAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGGAACAGCAGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| 3UTR CCA 72 bp | AGAGAGTGCTGCTGTTCCTTCAGGTCCCAAGGAAGATaGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RECCCSFRSQGR*WMAKRQDCELF Trigger: GAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGGAACAGCAGCACTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTCCTCATCTTCAAGGCTaGGGGTTTTGGCGTAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: GPKEDGGWLRGRIVSSSCPHLQG*GFWRRI Trigger: GATTCTACGCCAAAACCCCAAGCCTTGAAGATGAGG...ACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTGGACTGGGGGAAGCTaGGGCAGTGCCTTCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VMLRAGVLEALPQCLAGTWTGGS*GSAFSV Trigger: CACGCTGAAGGCACTGCCCCAGCTTCCCCCAGTCCA...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAAGCCTCATGGCTAGGCCAGGAGGTCCATaGGGCTGGCCGAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCWKPSRSVLLGPQSLMARPGGP*GWPSHC Trigger: GCAGTGGCTCGGCCAGCCCCATGGACCTCCTGGCCT...AGCCATGAGGCTTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCGGAATCGCTGGTTCGTaGCCAGCAGCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VMLRAGVLEALPQCLAGTGIAGS*PAAPGS Trigger: ACTTCCTGGGGCTGCTGGCCACGAACCAGCGATTCC...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | AGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGGAGAGCACAGCCACTaGCCTGGGACAGCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSSCHAEGRGAGSPPGEHSH*PGTAGA Trigger: TGCGCCTGCTGTCCCAGGCCAGTGGCTGTGCTCTCC...GGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCCTCTCAGCCTGGTCCTaGAGAGCACAGCCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSCHAEGRGAGSPPAVSCLSAWS*RAQPLA Trigger: GGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAG...GCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAAGCCTCATGGCTGAAGGCCACTCTGGCTaGGGACTCCGGGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCWKPSRSVLLGPQSLMAEGHSG*GLRGEV Trigger: GACTTCTCCCCGGAGTCCCCAGCCAGAGTGGCCTTC...AGCCATGAGGCTTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCGGAGAGGCTCCGCAATaGCTCCGACCCAGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMLRAGVLEALPQCLAGTGEAPQ*LRPRCQ Trigger: TTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCC...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR GCA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCCTGCATGTTCAGAGCTaGCAGATCCAGCCCGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VMLRAGVLEALPQCLAGTLHVQS*QIQPDP Trigger: AGGATCGGGCTGGATCTGGCAGCTCTGAACATGCAG...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCAAGGGGAGAGACCTGTaGTCTTCATACTCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMLRAGVLEALPQCLAGTKGRDL*SSYSAG Trigger: GCCAGCTGAGTATGAAGACCACAGGTCTCTCCCCTT...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAACACGGGGGTCCACATTaGAGCAATACCCTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGRGAGSPPAVSCWDLKHGGPH*SNTLCR Trigger: CCTACAGAGGGTATTGCTCCAATGTGGACCCCCGTG...TTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTCTGCTACTGGCTGTTTaGAGTAGGCCAGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVMLRAGVLEALPQCLALLLAV*SRPGGP Trigger: TGGACCTCCTGGCCTACTTCAAACAGCCAGTAGCAG...AGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTGGCCCGGCCGCGGTCTaGGGTCAGTTTCTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGPKEDGGWLRGRIVSSGPAAV*GQFLAG Trigger: CCCAGCAAGAAACTGACCTCAGACCGCGGCCGGGCC...AGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTAGCGGAAGGCCAGGGTaGAAACATTGGCTACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIVSSSCHAEGRGAGSPSGRPG*KHWLHG Trigger: CCCGTGTAGCCAATGTTTTCACCCTGGCCTTCCGCT...AGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR GCA 90 bp | AGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAAGCCTCATGGATGAACTGGCCCCACTaGATGAACATAAGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGAGSPPAVSCWDLKASWMNWPH*MNIRAR Trigger: CCGGGCCCTTATGTTCATGCAGTGGGGCCAGTTCAT...CCATGAGGCTTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTAAATCTCCACTGGACTaGGGGAAGCTGGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRIVSSSCHAEGRGAGSPKSPLD*GKLGQC Trigger: GCACTGCCCCAGCTTCCCCCAGTCCAGTGGAGATTT...AGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCCAGCAGGCGCAGCTGTaGTTCTGTGAGCACATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSCHAEGRGAGSPPAVSCQQAQL*FCEHIS Trigger: ACTGATGTGCTCACAGAACCACAGCTGCGCCTGCTG...GCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | AGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGCCCCAGGAAGTTaGTCCTATTACGGAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSSCHAEGRGAGSPPAAPGS*SYYGAA Trigger: TGCGGCTCCGTAATAGGACCAACTTCCTGGGGCTGC...GGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTCAGCAGCTTAGCCTCTaGTATGCAGTCTCGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPVMLRAGVLEALPQCLAQQLSL*YAVSKD Trigger: GTCCTTCGAGACTGCATAGCAGAGGCTAAGCTGCTG...AGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTCATGCTCAGCGGGCCAGGGCCTaGTTGGAGGCTCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEDGGWLRGRIVSSSCHAQRARA*LEAPSQ Trigger: CTGGCTGGGAGCCTCCAACCAGGCCCTGGCCCGCTG...AGCATGACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCCCAGGCATTGTATCCTaGAAGGCCGTGGTCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALAGNSGSQGRKQPHDLPPGIVS*KAVVPA Trigger: AGCCGGGACCACGGCCTTCCAGGATACAATGCCTGG...GGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | CGAGGTAAGTGGGCCTGTTGCCATAGCACCCTTGACGCTCTCAACCTAAAAAGCGTCTTCATACTCAGCTaGCAGCCAGCGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKWACCHSTLDALNLKSVFILS*QPAGQG Trigger: GCCCTGGCCCGCTGGCTGCCAGCTGAGTATGAAGAC...GCTTTTTAGGTTGAGAGCGTCAAGGGTGCTATGGCAACAGGCCCACTTACCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGGAGCTAAGCGGGACGTaGGAGTTGGGTGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSFRSQGRWWMAKRQDCEELSGT*ELGAEA Trigger: GGCCTCGGCACCCAACTCCCACGTCCCGCTTAGCTC...CTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | GGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCGTTACCCTCGGGAAGCGCACAATCTaGTTGGAGACATCCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GNSGSQGRKQPHDLPVTLGKRTI*LETSRT Trigger: TGTCCGGGATGTCTCCAATCAGATTGTGCGCTTCCC...GAGGGTAACGGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCAGTCCACACCCATGCTaGAGGCCACTCTGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRSQGRWWMAKRQDCELFSPHPC*RPLWLG Trigger: CCCCAGCCAGAGTGGCCTTCAGCATGGGTGTGGACT...GAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCGTTAGTCGCGCTGGTTCTTaGTGCGGGGATCATTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGNSGSQGRKQPHDLPVSRAGS*CGDHCV Trigger: CACGCAATGATCCCCGCATCAAGAACCAGCGCGACT...AACGGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCCATCTCTGGCTCTCCTaGACTGGTTCTCAAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCHAEGRGAGSPPAVSCHLWLS*TGSQKD Trigger: GTCTTTTTGAGAACCAGTTCAGGAGAGCCAGAGATG...GCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCGCAAGGCCGTCAGTTTaGGGGTTTCACTTGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALAGNSGSQGRKQPHDLPARPSV*GFHLTE Trigger: CTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGC...GGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGCGAAGACGTTGCATaGTGCTTTTCTGTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCHAEGRGAGSPPAVSCCEDVA*CFSVCD Trigger: ATCACACACAGAAAAGCATCATGCAACGTCTTCGCA...GCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | GGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCGTTACCCTCATCCTTCTCACTTGCTaGAACAGCTTGTCGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNSGSQGRKQPHDLPVTLILLTC*NSLSRS Trigger: GCTCCGCGACAAGCTGTTTCAGCAAGTGAGAAGGAT...GAGGGTAACGGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTGCACCTCTCAGCCTaGTCCTGGAGAGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKALAGNSGSQGRKQPHDLHLSA*SWRAQP Trigger: TGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAG...ATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGCTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATTTGTCTCCACTCCAGTaGGGATTCAGGCGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKALAGNSGSQGRKQPHDLSPLQ*GFRRLS Trigger: GCTGAGGCGCCTGAATCCCCACTGGAGTGGAGACAA...ATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGCTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR TCA 90 bp | CGAGGTAAGTGGGCCTGTTGCCATAGCACCCTTGACGCTCTCAACCTAAAAAGCCCCTCGAAACCGTGGTaGTGCCAGTATTGTCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RGKWACCHSTLDALNLKSPSKPW*CQYCRI Trigger: TATGCGACAATACTGGCATCACCACGGTTTCGAGGG...GCTTTTTAGGTTGAGAGCGTCAAGGGTGCTATGGCAACAGGCCCACTTACCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | CGAGGTAAGTGGGCCTGTTGCCATAGCACCCTTGACGCTCTCAACCTAAAAAGCCTGGCTCTCCTGAACTaGTTCTCAAAAAGACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGKWACCHSTLDALNLKSLALLN*FSKRQA Trigger: GGCTTGTCTTTTTGAGAACCAGTTCAGGAGAGCCAG...GCTTTTTAGGTTGAGAGCGTCAAGGGTGCTATGGCAACAGGCCCACTTACCTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATAGGTCAGTTTCTTGCTaGGGAAGCGCACAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKALAGNSGSQGRKQPHDRSVSC*GSAQSD Trigger: ATCAGATTGTGCGCTTCCCCAGCAAGAAACTGACCT...ATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGCTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTTAACCAGCAAAAGCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAAGCGCACAATCTGATTaGAGACATCCCGGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTSKSSSRKQWFAGQKSAQSD*RHPGQE Trigger: CTCTTGTCCGGGATGTCTCCAATCAGATTGTGCGCT...TTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGCTTTTGCTGGTTAAACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTGATAGGTTCAACTTaGGAATACGGCTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFRSQGRWWMAKRQDCELIGST*EYGYSS Trigger: TGAGCTGTAGCCGTATTCCCAAGTTGAACCTATCAG...CTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 90 bp | CCAGAAGCGGCCCCACTCGGGCCCCCGGCAGGAGAGGCTCCGCAATaGCTCCGACCCAGATGTCAATGTTGTCGGGCGTCTTGTACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PEAAPLGPPAGEAPQ*LRPRCQCCRASCTV Trigger: GACTGTACAAGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCCTGCCGGGGGCCCGAGTGGGGCCGCTTCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 90 bp | TTGCTGCACCTCTCAGCCTGGTCCTGGAGAGCACAGCCACTGGCCTaGGACAGCAGGCGCAGCTGTGGTTCTGTGAGCACATCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHLSAWSWRAQPLA*DSRRSCGSVSTSVA Trigger: TGCCACTGATGTGCTCACAGAACCACAGCTGCGCCTGCTGTCCCAGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAATTGATGCGGGGATCATaGCGTGGGATCTTGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AEGRGAGSPPAVSCWDLKLMRGS*RGILMG Trigger: CCCCATCAAGATCCCACGCAATGATCCCCGCATCAA...TTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 90 bp | ACAGGTCTTCTCACAGTCCACACCCATGCTGAAGGCCACTCTGGCTaGGGACTCCGGGGAGAAGTCCAGGTCATGGTCGATGAACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLTVHTHAEGHSG*GLRGEVQVMVDELA Trigger: GGCCAGTTCATCGACCATGACCTGGACTTCTCCCCGGAGTCCCCAGCCAGAGTGGCCTTCAGCATGGGTGTGGACTGTGAGAAGACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTGAGGTCAGTTTCTaGCTGGGGAAGCGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSCHAEGRGAGSPPAVSEVSF*LGKRTI Trigger: GATTGTGCGCTTCCCCAGCAAGAAACTGACCTCAGA...CACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGATCTGGTTGCGGACTTaGTTCCTGTTTTGGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSCHAEGRGAGSPPAVIWLRT*FLFWGH Trigger: GTGCCCCCAAAACAGGAACAAAGTCCGCAACCAGAT...CACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTGCCAGGGTGAAAACATaGGCTACACGGGGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRIVSSSCHAEGRGAGSPARVKT*ATRGST Trigger: TGTGGACCCCCGTGTAGCCAATGTTTTCACCCTGGC...AGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCCCTCAGGGCTTTGCGTaGTCTTTTGGTGAAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VMLRAGVLEALPQCLAGTPQGFA*SFGENS Trigger: GGAGTTTTCACCAAAAGACAACGCAAAGCCCTGAGG...GGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAGCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGCAGGGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAAGGCTGATAGGTTCAACTaGGGAATACGGCTACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAGVLEALPQCLAGTSKADRFN*GIRLQL Trigger: GAGCTGTAGCCGTATTCCCAAGTTGAACCTATCAGC...CTTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCCCTGCCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS TCA 90 bp | AGTGTCCACCAGCAGCTTAGCCTCTGCTATGCAGTCTCGAAGGACTaGAATCTCCACTGGACTGGGGGAAGCTGGGGCAGTGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVHQQLSLCYAVSKD*NLHWTGGSWGSAFS Trigger: GCTGAAGGCACTGCCCCAGCTTCCCCCAGTCCAGTGGAGATTTCAGTCCTTCGAGACTGCATAGCAGAGGCTAAGCTGCTGGTGGACACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS TCA 90 bp | GGTCCACATTGGAGCAATACCCTCTGTAGGGACCCAAAGTTCTTCTaGTCCGGGCCCTGCCCAGAACCAGAGGCAGGAAGTCTCGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHWSNTLCRDPKFF*SGPCPEPEAGSLGR Trigger: CCTACCGAGACTTCCTGCCTCTGGTTCTGGGCAGGGCCCGGATCAGAAGAACTTTGGGTCCCTACAGAGGGTATTGCTCCAATGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCAGTAGGGCTCGACCGTaGTCCTGGAATCGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALAGNSGSQGRKQPHDLPSRARP*SWNRWF Trigger: GAACCAGCGATTCCAGGACAACGGTCGAGCCCTACT...GGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 90 bp | GCTTCTTGTTGTTGCATCTCCCTGTTATGGTTCGGTACTTGTTGCTaGACCTCTCAGCCTGGTCCTGGAGAGCACAGCCACTGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASCCCISLLWFGTCC*TSQPGPGEHSHWPG Trigger: CCCAGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 90 bp | GGCGATTGTGTTCTCTCACAAACAGCGTGTGCAAGGCCGTCAGTTTaGGGGTTTCACTTGACCGAGTGTCACCTGCCAGGAAGCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDCVLSQTACARPSV*GFHLTECHLPGSRG Trigger: TCCCCTGCTTCCTGGCAGGTGACACTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTAGCAGCCCCAGGAAGTaGGTCCTATTACGGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGPKEDGGWLRGRIVSSSSPRK*VLLRSR Trigger: GCGGCTCCGTAATAGGACCAACTTCCTGGGGCTGCT...AGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 90 bp | CTCAGCTCAGCGGCTAGGCGATTGTGTTCTCTCACAAACAGCGTGTaGAAGGCCGTCAGTTTGGGGGTTTCACTTGACCGAGTGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAARRLCSLTNSV*KAVSLGVSLDRVSP Trigger: AGGTGACACTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCCTAGCCGCTGAGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGAAGCCCTCCCGCAGTGTCTTGCTGGGACCTCAAAGCCTCATGGCTGGATGCTTCTTGTTGTaGCATCTCCCTGTTATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCWKPSRSVLLGPQSLMAGCFLL*HLPVMV Trigger: AACCATAACAGGGAGATGCAACAACAAGAAGCATCC...AGCCATGAGGCTTTGAGGTCCCAGCAAGACACTGCGGGAGGGCTTCCAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTAGTGCGTTGATCTGGTaGCGGACTTTGTTCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRIVSSSCHAEGRGAGSPSALIW*RTLFLF Trigger: AAACAGGAACAAAGTCCGCAACCAGATCAACGCACT...AGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTAAGCGTCTCCAGGCATaGTATCCTGGAAGGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPKEDGGWLRGRIVSSSCKRLQA*YPGRPW Trigger: CCACGGCCTTCCAGGATACAATGCCTGGAGACGCTT...ACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 90 bp | GATGCTTCTTGTTGTTGCATCTCCCTGTTATGGTTCGGTACTTGTTaGTGCACCTCTCAGCCTGGTCCTGGAGAGCACAGCCACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DASCCCISLLWFGTC*CTSQPGPGEHSHWP Trigger: AGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTGTGAGCTCTTCCTGTCATGCTGAGGGCAGGGGTGCTGGAAGCCCTGCTTTGCGTTGTCTTTaGGTGAAAACTCCCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRIVSSSCHAEGRGAGSPALRCL*VKTPHF Trigger: GAAATGGGGAGTTTTCACCAAAAGACAACGCAAAGC...AGGGCTTCCAGCACCCCTGCCCTCAGCATGACAGGAAGAGCTCACAATCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | CCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTCATGGGTCCTCATGCAGGTaGTCAAAAGGCAGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKEDGGWLRGRIVSSSCHGSSCR*SKGSRA Trigger: AGCCCTACTGCCTTTTGACAACCTGCATGAGGACCC...ATGACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCTCTTCCTGTATCTTCCGGGCTTCGTaGTACAGCTTGTCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GPKEDGGWLRGRIVSSSCIFRAS*YSLSPL Trigger: GAGTGGAGACAAGCTGTACAACGAAGCCCGGAAGAT...ACAGGAAGAGCTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGCAGCCTCATGATCTCCCCGTTATTCGCCTCAGGGCTTaGCGTTGTCTTTTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAGNSGSQGRKQPHDLPVIRLRA*RCLLVK Trigger: TTTCACCAAAAGACAACGCAAAGCCCTGAGGCGAAT...AACGGGGAGATCATGAGGCTGCTTTCTGCCCTGCGAACCACTGTTTCCTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGTTTAACCAGCAAAAGCTCTAGCAGGAAACAGTGGTTCGCAGGGCAGAAAGTTTGGGGGTTTCACTaGACCGAGTGTCACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLTSKSSSRKQWFAGQKVWGFH*TECHLP Trigger: TGGCAGGTGACACTCGGTCAAGTGAAACCCCCAAAC...TTTCTGCCCTGCGAACCACTGTTTCCTGCTAGAGCTTTTGCTGGTTAAACTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTCAGGTCCCAAGGAAGATGGTGGATGGCTAAGAGGCAGGATTGTGAGCAGGGATGCTTCTTGTaGTTGCATCTCCCTGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CSFRSQGRWWMAKRQDCEQGCFL*LHLPVM Trigger: CATAACAGGGAGATGCAACAACAAGAAGCATCCCTG...CTCACAATCCTGCCTCTTAGCCATCCACCATCTTCCTTGGGACCTGAAGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | GCCCCACTCGGGCCCCCGGCAGGAGAGGCTCCGCAATaGCTCCGACCCAGATGTCAATGTTGTCGGGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: APLGPPAGEAPQ*LRPRCQCCRAS Trigger: AGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCCTGCCGGGGGCCCGAGTGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | CTCACAGTCCACACCCATGCTGAAGGCCACTCTGGCTaGGGACTCCGGGGAGAAGTCCAGGTCATGGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LTVHTHAEGHSG*GLRGEVQVMVD Trigger: ATCGACCATGACCTGGACTTCTCCCCGGAGTCCCCAGCCAGAGTGGCCTTCAGCATGGGTGTGGACTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | CGCCAGCTGGCAAAGAATACAGAGCTAAGCGGGACGTaGGAGTTGGGTGCCGAGGCCCGATACTGGCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: RQLAKNTELSGT*ELGAEARYWLS Trigger: GGATAGCCAGTATCGGGCCTCGGCACCCAACTCCCACGTCCCGCTTAGCTCTGTATTCTTTGCCAGCTGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | CTGGCAAAGAATACAGAGCTAAGCGGGACGTGGGAGTaGGGTGCCGAGGCCCGATACTGGCTATCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LAKNTELSGTWE*GAEARYWLSRR Trigger: CCGCCTGGATAGCCAGTATCGGGCCTCGGCACCCAACTCCCACGTCCCGCTTAGCTCTGTATTCTTTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | GTTATGGTTCGGTACTTGTTGCTGCACCTCTCAGCCTaGTCCTGGAGAGCACAGCCACTGGCCTGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VMVRYLLLHLSA*SWRAQPLAWDS Trigger: GCTGTCCCAGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 90 bp | TGGGACAGCAGGCGCAGCTGTGGTTCTGTGAGCACATCAGTGGCATaGAAGGGTCTAGATCCCCGTGGCTGCAGCCTCTCTTCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WDSRRSCGSVSTSVA*KGLDPRGCSLSSSS Trigger: GCTGCTAGAAGAGAGGCTGCAGCCACGGGGATCTAGACCCTTCAATGCCACTGATGTGCTCACAGAACCACAGCTGCGCCTGCTGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | CTATGCAGTCTCGAAGGACTGAAATCTCCACTGGACTaGGGGAAGCTGGGGCAGTGCCTTCAGCGTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCSLEGLKSPLD*GKLGQCLQRVG Trigger: CCCAACACGCTGAAGGCACTGCCCCAGCTTCCCCCAGTCCAGTGGAGATTTCAGTCCTTCGAGACTGCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | AGGCGCAGCTGTGGTTCTGTGAGCACATCAGTGGCATaGAAGGGTCTAGATCCCCGTGGCTGCAGCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRSCGSVSTSVA*KGLDPRGCSLS Trigger: AGAGAGGCTGCAGCCACGGGGATCTAGACCCTTCAATGCCACTGATGTGCTCACAGAACCACAGCTGCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 90 bp | AGGCGATTGTGTTCTCTCACAAACAGCGTGTGCAAGGCCGTCAGTTaGGGGGTTTCACTTGACCGAGTGTCACCTGCCAGGAAGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLCSLTNSVCKAVS*GVSLDRVSPARKQG Trigger: CCCCTGCTTCCTGGCAGGTGACACTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 90 bp | CCCGGCAGGAGAGGCTCCGCAATGGCTCCGACCCAGATGTCAATGTaGTCGGGCGTCTTGTACAGTCTCAGAAACTTCCTTGCCAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRRGSAMAPTQMSM*SGVLYSLRNFLAKS Trigger: GGATTTGGCAAGGAAGTTTCTGAGACTGTACAAGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCCTGCCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS TCA 72 bp | AGAGCTGCCAGATCCAGCCCGATCCTTCTCACTTGCTaGAACAGCTTGTCGCGGAGCTCATCCACCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RAARSSPILLTC*NSLSRSSSTSM Trigger: CATGCTGGTGGATGAGCTCCGCGACAAGCTGTTTCAGCAAGTGAGAAGGATCGGGCTGGATCTGGCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | ACATCAGTGGCATTGAAGGGTCTAGATCCCCGTGGCTaGAGCCTCTCTTCTAGCAGCCCTAAGGCCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: TSVALKGLDPRG*SLSSSSPKATC Trigger: GCATGTGGCCTTAGGGCTGCTAGAAGAGAGGCTGCAGCCACGGGGATCTAGACCCTTCAATGCCACTGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | AAAGAATACAGAGCTAAGCGGGACGTGGGAGTTGGGTaGCGAGGCCCGATACTGGCTATCCAGGCGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: KEYRAKRDVGVG*RGPILAIQAEH Trigger: ATGTTCCGCCTGGATAGCCAGTATCGGGCCTCGGCACCCAACTCCCACGTCCCGCTTAGCTCTGTATTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | GTTCAGAGCTGCCAGATCCAGCCCGATCCTTCTCACTaGCTGAAACAGCTTGTCGCGGAGCTCATCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQSCQIQPDPSH*LKQLVAELIHQ Trigger: CTGGTGGATGAGCTCCGCGACAAGCTGTTTCAGCAAGTGAGAAGGATCGGGCTGGATCTGGCAGCTCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | TGTTGCATCTCCCTGTTATGGTTCGGTACTTGTTGCTaGACCTCTCAGCCTGGTCCTGGAGAGCACAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCISLLWFGTCC*TSQPGPGEHSH Trigger: GTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | GCGGCTAGGCGATTGTGTTCTCTCACAAACAGCGTGTaGAAGGCCGTCAGTTTGGGGGTTTCACTTGACCGA | + |
|
Preference number: 6 (lower is better) Translates to: AARRLCSLTNSV*KAVSLGVSLDR Trigger: TCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCCTAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | AGGGCCTGGTTGGAGGCTCCCAGCCAGGGATGCTTCTaGTTGTTGCATCTCCCTGTTATGGTTCGGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAWLEAPSQGCF*LLHLPVMVRYL Trigger: CAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTGGCTGGGAGCCTCCAACCAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 90 bp | CAGGGATGCTTCTTGTTGTTGCATCTCCCTGTTATGGTTCGGTACTaGTTGCTGCACCTCTCAGCCTGGTCCTGGAGAGCACAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QGCFLLLHLPVMVRY*LLHLSAWSWRAQPL Trigger: CAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | TGTTGTTGCATCTCCCTGTTATGGTTCGGTACTTGTTaGTGCACCTCTCAGCCTGGTCCTGGAGAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCCISLLWFGTC*CTSQPGPGEHS Trigger: GCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | GGTTGGAGGCTCCCAGCCAGGGATGCTTCTTGTTGTTaGATCTCCCTGTTATGGTTCGGTACTTGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GWRLPARDASCC*ISLLWFGTCCC Trigger: GCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTGGCTGGGAGCCTCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | GCCTGGTTGGAGGCTCCCAGCCAGGGATGCTTCTTGTaGTTGCATCTCCCTGTTATGGTTCGGTACTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AWLEAPSQGCFL*LHLPVMVRYLL Trigger: CAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTGGCTGGGAGCCTCCAACCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS GCA 72 bp | CATATAATCAGCGGCCTGAACCACTCTTCTGGTGGCTaGTACTGGCTGTTTGAAGTAGGCCAGGAGGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HIISGLNHSSGG*YWLFEVGQEVH Trigger: ATGGACCTCCTGGCCTACTTCAAACAGCCAGTAGCAGCCACCAGAAGAGTGGTTCAGGCCGCTGATTATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | GCCAGGGATGCTTCTTGTTGTTGCATCTCCCTGTTATaGTTCGGTACTTGTTGCTGCACCTCTCAGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARDASCCCISLL*FGTCCCTSQPG Trigger: ACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | AGGTCAGTTTCTTGCTGGGGAAGCGCACAATCTGATTaGAGACATCCCGGACAAGAGGAAGCAGGAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSVSCWGSAQSD*RHPGQEEAGSH Trigger: ATGGCTTCCTGCTTCCTCTTGTCCGGGATGTCTCCAATCAGATTGTGCGCTTCCCCAGCAAGAAACTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | TGGTTGGAGGCTCCCAGCCAGGGATGCTTCTTGTTGTaGCATCTCCCTGTTATGGTTCGGTACTTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLEAPSQGCFLL*HLPVMVRYLLL Trigger: CAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAAGAAGCATCCCTGGCTGGGAGCCTCCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CAA 72 bp | AGAGGCTCCGCAATGGCTCCGACCCAGATGTCAATGTaGTCGGGCGTCTTGTACAGTCTCAGAAACTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGSAMAPTQMSM*SGVLYSLRNFL Trigger: AAGGAAGTTTCTGAGACTGTACAAGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||
| CDS CCA 72 bp | CAACTTGGGAATACGGCTACAGCTCACAAAACCCTGTaGGTAGATGTTAGCCCTGAAGATGTCCCTCGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QLGNTATAHKTL*VDVSPEDVPRN Trigger: GTTTCGAGGGACATCTTCAGGGCTAACATCTACCCACAGGGTTTTGTGAGCTGTAGCCGTATTCCCAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049768.4 |
||