Pregenerated sensors for EPS8L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040600Ensembl transcript IDs: ENSMUST00000037375.10
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGATCTTCTTTGCTTTGTaGTCCAGGATATGTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGIFFAL*SRICGL Trigger: CAAGCCACATATCCTGGATCACAAAGCAAAGAAGAT...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| 3UTR-3UTR CCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGTGCCAACTTAGGGTGTaGGGTAAAATAAATAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGCQLRV*GKINSN Trigger: GTTACTATTTATTTTACCCCACACCCTAAGTTGGCA...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTACCAAATACTCCATCTaGCACATGAGAGGTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSVWTCSSSLLCDPGYVATKYSI*HMRGPW Trigger: CCAAGGACCTCTCATGTGCAAGATGGAGTATTTGGT...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | GTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTCCCCAGCATCCTTCTaGCAGCGTCCAGCCGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VSNPMRYHLPQCLDLFIFSPASF*QRPAGP Trigger: AGGCCCGGCTGGACGCTGTCAGAAGGATGCTGGGGA...GAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTGCGTCCAGCCGGGCCTaGATCCGTGGAGCCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LQPNEVPFASVSGPVHLLASSRA*IRGASC Trigger: ACAGGAGGCTCCACGGATCCAGGCCCGGCTGGACGC...AAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATAGGCTTGTCCTCAGCTaGTCTGCCCCCACTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EGLQPNEVPFASVSGPVHRLVLS*SAPTSW Trigger: CCAGGAAGTGGGGGCAGAGCAGCTGAGGACAAGCCT...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATTTTTCAGGGCTGCTCTaGCAGGGCTGGGGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EGLQPNEVPFASVSGPVHFSGLL*QGWGWR Trigger: TCTCCAGCCCCAGCCCTGGCAGAGCAGCCCTGAAAA...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCCCTGCTCTGCCAGGGCTaGGGCTGGAGAGTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VSGPVHLLCFVIQDMWLALLCQG*GWRVGG Trigger: ACCTCCCACTCTCCAGCCCCAGCCCTGGCAGAGCAG...GGCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATTCCAGTCAGCCCAGCTaGTGGTCCAGGATGTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: EGLQPNEVPFASVSGPVHSSQPS*WSRMCL Trigger: TAGGCACATCCTGGACCACCAGCTGGGCTGACTGGA...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTGCCAGGGCTGGGGCTaGAGAGTGGGAGGTTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VSNPMRYHLPQCLDLFIFCQGWG*RVGGLS Trigger: ACTCAAACCTCCCACTCTCCAGCCCCAGCCCTGGCA...GAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTCCGGTGCAAGTAGATaGCTCTGCTGCTGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVASGASR*LCCWAG Trigger: CCCGGCCCAGCAGCAGAGCCATCTACTTGCACCGGA...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCCTCTCGGGGCTCCAGCTaGCAGGGGCTCCAGGATATT | + |
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Preference number: 4 (lower is better) Translates to: VSGPVHLLCFVIQDMWLASRGSS*QGLQDI Trigger: AATATCCTGGAGCCCCTGCCAGCTGGAGCCCCGAGA...GGCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTAAGGATGGTTGTCGGTaGCCTCTCGGGGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LQPNEVPFASVSGPVHLLKDGCR*PLGAPA Trigger: AGCTGGAGCCCCGAGAGGCCACCGACAACCATCCTT...AAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGCCGTGGAGCCTCCTGTaGACACAGCATCTGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVPWSLL*TQHLQL Trigger: GAGCTGCAGATGCTGTGTCCACAGGAGGCTCCACGG...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | GTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCCTGGGCATCCATCTCCTaGAGCTTCTGTAGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: VSGPVHLLCFVIQDMWLAWASIS*SFCRAS Trigger: GGATGCCCTACAGAAGCTTCAGGAGATGGATGCCCA...GGCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGATGCAGGAACAGGTCTTaGCTCCACACTCGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGCRNRS*LHTRPW Trigger: CCAGGGCCGAGTGTGGAGTCAAGACCTGTTCCTGCA...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTCTTCCAGGGCCTTCTaGAGGCTTGTCCTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVASSRAF*RLVLSC Trigger: GCAGCTGAGGACAAGCCTGCAGAAGGCCCTGGAAGA...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | GTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTGGTGGTCCAGGATGTaGCTAGTGACTTCCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: VSNPMRYHLPQCLDLFIFWWSRM*LVTSRV Trigger: CACTCTGGAAGTCACTAGGCACATCCTGGACCACCA...GAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCTTGCATTTTCAGGGCTaGTCTGCCAGGGCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SVWTCSSSLLCDPGYVACLHFQG*SARAGA Trigger: AGCCCCAGCCCTGGCAGAGCAGCCCTGAAAATGCAA...GCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATTCTGAGGCCATACTCTaGGAATATTCCTTCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EGLQPNEVPFASVSGPVHSEAIL*EYSFRC Trigger: GCACCGGAAGGAATATTCCCAGAGTATGGCCTCAGA...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCTGTGGGTTGGTAGGGTaGCGGTTCACTGCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVWTCSSSLLCDPGYVACCGLVG*RFTACP Trigger: TGGACAGGCAGTGAACCGCCACCCTACCAACCCACA...GCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGATGGGGCCCTAAAGGATaGTTGTCGGTGGCCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGWGPKG*LSVASR Trigger: CCGAGAGGCCACCGACAACCATCCTTTAGGGCCCCA...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGGACCTCCTCAGGCTTTaGGCTCAGGCGAAGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGDLLRL*AQAKHW Trigger: CCAATGCTTCGCCTGAGCTCAAAGCCTGAGGAGGTC...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAGGGGCGCTTGTTTCCTaGATCCGCAAAGCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGGALVS*IRKASF Trigger: GAAGCTGGCTTTGCGGATGCAGGAAACAAGCGCCCC...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGACTGCAGCAGGTCTATTaGTTTGGGGGTGAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGLQQVY*FGGEEG Trigger: CCCCTCCTCACCCCCAAAGCAATAGACCTGCTGCAG...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATTTCCTGGGCATTCCTTaGTTCAAACTCGTACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EGLQPNEVPFASVSGPVHFLGIP*FKLVQD Trigger: GTCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAA...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGTGGACACAGCATCTaGAGCTCCCCAGGTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: PMRYHLPQCLDLFIFFALCGHSI*SSPGLM Trigger: CATGAGACCTGGGGAGCTGCAGATGCTGTGTCCACA...CAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCCTCAATGTCCAGCAGATaGAGCCAGCCATCTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: VSGPVHLLCFVIQDMWLASMSSR*SQPSLT Trigger: GGTCAGAGATGGCTGGCTCCATCTGCTGGACATTGA...GGCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAATAAGCTCCTCATCCCTCTCTaGGTCCTCGGGAGAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LFIGRIGTKEIRSKTGNKLLIPL*VLGRGS Trigger: GCTCCCTCTCCCGAGGACCCAGAGAGGGATGAGGAG...CTTATTCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGGAAATCACTTTGGCTaGAAGGCCAGCCTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVGNHFG*KASLRA Trigger: TGCCCTGAGGCTGGCCTTCCAGCCAAAGTGATTTCC...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTCAGGCGAAGCATTaGGGCCCTAAAGGATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVAQAKH*GPKGWL Trigger: CAACCATCCTTTAGGGCCCCAATGCTTCGCCTGAGC...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTCTGCCCCCACTTCCTaGCATTGGAACAGCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVASAPTS*HWNSKV Trigger: CACTTTGCTGTTCCAATGCCAGGAAGTGGGGGCAGA...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCGTTATGTGGCTGTTCTaGAGGAAACCTATGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSNPMRYHLPQCLDLFIFVMWLF*RKPMLW Trigger: CCAGAGCATAGGTTTCCTCCAGAACAGCCACATAAC...GAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | CTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAATAAGGGAGCCAGCCATCTCTaGCCTGCAGGAACAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LFIGRIGTKEIRSKTGNKGASHL*PAGTGL Trigger: AAGACCTGTTCCTGCAGGTCAGAGATGGCTGGCTCC...CTTATTCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGCGAGATGCTGCGTTCTaGGGTCATGTTATGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGRDAAF*GHVMWL Trigger: CAGCCACATAACATGACCTCAGAACGCAGCATCTCG...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGCACCATCGCTTGCTCTaGTCCAGAACCTCCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGHHRLL*SRTSRI Trigger: GATTCTGGAGGTTCTGGATCAGAGCAAGCGATGGTG...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGACGAGGGTCCTTACAGTaGCAGTGGAGAAGTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGRGSLQ*QWRSSL Trigger: CAGAGAACTTCTCCACTGTCACTGTAAGGACCCTCG...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAAGATGCTCCACCCTGTaGTGTAGGAGGGTAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGRCSTL*CRRVGS Trigger: AGAACCTACCCTCCTACAGCACAGGGTGGAGCATCT...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTCTGGAGGAAACCTATaGTCTGGAGAGAACCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVASGGNL*SGENLC Trigger: GCAGAGGTTCTCTCCAGAGCATAGGTTTCCTCCAGA...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTGGGGCTCCAGGATATTaGTGGGAATGTAACCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVAGAPGY*WECNQS Trigger: TGACTGGTTACATTCCCAGCAATATCCTGGAGCCCC...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTATGTCTCTTAGGACGTaGTTCAGCACCTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LSVWTCSSSLLCDPGYVAMSLRT*FSTSSS Trigger: GGATGAGGAGGTGCTGAACCACGTCCTAAGAGACAT...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGTTGTTATGGGCATCATaGAGCGGGGCTGTGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVLLWAS*SGAVES Trigger: AGATTCCACAGCCCCGCTCCATGATGCCCATAACAA...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCCACAGTCAGTTCCTaGGCATTCCTTGCTTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVATVSS*AFLASN Trigger: GTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGC...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGCCAGCCTCAGGGCACTaGGATAGGATAAATTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGPASGH*DRINFR Trigger: CCTGAAATTTATCCTATCTCAGTGCCCTGAGGCTGG...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTTGTAGCCAGGCTGTaGCCTCCTCAGGCTTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRLVARL*PPQALS Trigger: GCTCAAAGCCTGAGGAGGTCACAGCCTGGCTACAAG...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGATGTCCTCAGCTGCTCTaGCCCCACTTCCTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRCPQLL*PHFLAL Trigger: CAATGCCAGGAAGTGGGGGCAGAGCAGCTGAGGACA...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGAGGATGGCGAGATGCTaGGTTCTGAGGTCATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVWTCSSSLLCDPGYVRMARC*VLRSCY Trigger: ATAACATGACCTCAGAACGCAGCATCTCGCCATCCT...CACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAAGGAAACCTATGCTCTaGAGAGAACCTCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCFLLAGLGLKRSGVRLGRKPML*REPLLQ Trigger: CTGGAGCAGAGGTTCTCTCCAGAGCATAGGTTTCCT...TCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGAGGAACAGCAAAGTGCTaGTGCCTGGCAAGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRGTAKC*CLASQT Trigger: AGTCTGGCTTGCCAGGCATCAGCACTTTGCTGTTCC...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR TCA 90 bp | GTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCCAGTTTTGTCTTCTTATaGCTGTTTCTTGCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSGPVHLLCFVIQDMWLASFVFL*LFLAWT Trigger: GGTCCAGGCAAGAAACAGTCATAAGAAGACAAAACT...GGCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | ACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGTTACATGTCATCAGATaGTCCACCCTGTGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TMLFIGRIGTKEIRSKTGLHVIR*STLCCR Trigger: CCTACAGCACAGGGTGGAGCATCTGATGACATGTAA...CCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR GCA 90 bp | CTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAATAAGGTAACCAGTCAGTCCTaGTTCGTTCTTCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFIGRIGTKEIRSKTGNKVTSQS*FVLHQP Trigger: TGGCTGGTGAAGAACGAAGCAGGACTGACTGGTTAC...CTTATTCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACTGGGAATAAGCCCACTTCCTGGCATTaGAACAGCAAAGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFIGRIGTKEIRSKTGNKPTSWH*NSKVLM Trigger: CATCAGCACTTTGCTGTTCCAATGCCAGGAAGTGGG...CTTATTCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGACCATCTGTCCTGGCTTaGATGATGGACTCCAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRPSVLA*MMDSKS Trigger: CGATTTGGAGTCCATCATCCAAGCCAGGACAGATGG...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | CCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGCTCAACTTGATCTTCTaGAAGCAGTCAATGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PMRYHLPQCLDLFIFFALLNLIF*KQSMYS Trigger: AGAGTACATTGACTGCTTCCAGAAGATCAAGTTGAG...CAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CCA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGAAGGGAAATCGAATCCTaGTTTGTTATGGGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRREIES*FVMGIM Trigger: CATGATGCCCATAACAAACCAGGATTCGATTTCCCT...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| 3UTR CAA 72 bp | ATAGAACAAGTTAAACGATGCTTTTTATTGGCAGGATaGGGACTAAAGAGATCAGGAGTAAGACTGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IEQVKRCFLLAG*GLKRSGVRLGI Trigger: TATTCCCAGTCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAACTTGTTCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | CATCCCCAGCATCCTTCTGACAGCGTCCAGCCGGGCCTGGATCCGTaGAGCCTCCTGTGGACACAGCATCTGCAGCTCCCCAGGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPQHPSDSVQPGLDP*SLLWTQHLQLPRSH Trigger: ATGAGACCTGGGGAGCTGCAGATGCTGTGTCCACAGGAGGCTCCACGGATCCAGGCCCGGCTGGACGCTGTCAGAAGGATGCTGGGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | GCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGTGGTCCAGGATGTaGCTAGTGACTTCCAGAGTGTGTCCTCGGGTGGGCTTAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVHCLSSQPSWWSRM*LVTSRVCPRVGLDR Trigger: CCTGTCTAAGCCCACCCGAGGACACACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | GTCGGTGGCCTCTCGGGGCTCCAGCTGGCAGGGGCTCCAGGATATTaGTGGGAATGTAACCAGTCAGTCCTGCTTCGTTCTTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGGLSGLQLAGAPGY*WECNQSVLLRSSPA Trigger: GGCTGGTGAAGAACGAAGCAGGACTGACTGGTTACATTCCCAGCAATATCCTGGAGCCCCTGCCAGCTGGAGCCCCGAGAGGCCACCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | GTTGGTAGGGTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGTaGTCCAGGATGTGCCTAGTGACTTCCAGAGTGTGTCCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRVAVHCLSSQPSW*SRMCLVTSRVCPRV Trigger: CACCCGAGGACACACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | TGGGTTGGTAGGGTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTaGTGGTCCAGGATGTGCCTAGTGACTTCCAGAGTGTGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WVGRVAVHCLSSQPS*WSRMCLVTSRVCPR Trigger: CCGAGGACACACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | GGGCTGTGGAATCTGCCAGCCATCGTAGAATGTGGGTTGGTAGGGTaGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGTGGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLWNLPAIVECGLVG*RFTACPVSPAGGPG Trigger: TCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | GCATCATGGAGCGGGGCTGTGGAATCTGCCAGCCATCGTAGAATGTaGGTTGGTAGGGTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASWSGAVESASHRRM*VGRVAVHCLSSQPS Trigger: GCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCCCGCTCCATGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | GGTGGCCTCTCGGGGCTCCAGCTGGCAGGGGCTCCAGGATATTGCTaGGAATGTAACCAGTCAGTCCTGCTTCGTTCTTCACCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGLSGLQLAGAPGYC*ECNQSVLLRSSPAT Trigger: GGTGGCTGGTGAAGAACGAAGCAGGACTGACTGGTTACATTCCCAGCAATATCCTGGAGCCCCTGCCAGCTGGAGCCCCGAGAGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | TCTGCCAGCCATCGTAGAATGTGGGTTGGTAGGGTGGCGGTTCACTaGCTGTCCAGTCAGCCCAGCTGGTGGTCCAGGATGTGCCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SASHRRMWVGRVAVH*LSSQPSWWSRMCLV Trigger: CACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 90 bp | GGAGCCTCCTGTGGACACAGCATCTGCAGCTCCCCAGGTCTCATGTaGAGTAGCTGGCTTCCCATTAGGGACCCGAGGGTCCTTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GASCGHSICSSPGLM*SSWLPIRDPRVLTV Trigger: CACTGTAAGGACCCTCGGGTCCCTAATGGGAAGCCAGCTACTTCACATGAGACCTGGGGAGCTGCAGATGCTGTGTCCACAGGAGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | TGGAGAGAACCTCTGCTCCAGAGGGGGTGCCTGTTGTATAGGGAGTaGCCTTTCCAGAGGAGGCCCCTTCCATCTGTCCTGGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WREPLLQRGCLLYRE*PFQRRPLPSVLAWM Trigger: CATCCAAGCCAGGACAGATGGAAGGGGCCTCCTCTGGAAAGGCCACTCCCTATACAACAGGCACCCCCTCTGGAGCAGAGGTTCTCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | TTCTGCAGGCTTGTCCTCAGCTGCTCTGCCCCCACTTCCTGGCATTaGAACAGCAAAGTGCTGATGCCTGGCAAGCCAGACTCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FCRLVLSCSAPTSWH*NSKVLMPGKPDSCT Trigger: TGTGCAGGAGTCTGGCTTGCCAGGCATCAGCACTTTGCTGTTCCAATGCCAGGAAGTGGGGGCAGAGCAGCTGAGGACAAGCCTGCAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATGGGCCTTCTGCAGGCTaGTCCTCAGCTGCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGLQPNEVPFASVSGPVHGPSAG*SSAALP Trigger: GGGCAGAGCAGCTGAGGACAAGCCTGCAGAAGGCCC...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | TTTGGCTCCCGGACTCTCTGTGTCCCCAGCTTACATGTCATCAGATaGTCCACCCTGTGCTGTAGGAGGGTAGGTTCTGAGGCCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: FGSRTLCVPSLHVIR*STLCCRRVGSEAIL Trigger: GAGTATGGCCTCAGAACCTACCCTCCTACAGCACAGGGTGGAGCATCTGATGACATGTAAGCTGGGGACACAGAGAGTCCGGGAGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | TCTTCTAGCTCTTCTTCCAGGGCCTTCTGCAGGCTTGTCCTCAGCTaGTCTGCCCCCACTTCCTGGCATTGGAACAGCAAAGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSRAFCRLVLS*SAPTSWHWNSKVLM Trigger: CATCAGCACTTTGCTGTTCCAATGCCAGGAAGTGGGGGCAGAGCAGCTGAGGACAAGCCTGCAGAAGGCCCTGGAAGAAGAGCTAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | AGGGTTTGGAAGATGAGGCCCACGAACTCAGGGGCGCTTGTTTCCTaGATCCGCAAAGCCAGCTTCCCCAAGAGGTTGAAGCTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVWKMRPTNSGALVS*IRKASFPKRLKLNL Trigger: CAAGTTGAGCTTCAACCTCTTGGGGAAGCTGGCTTTGCGGATGCAGGAAACAAGCGCCCCTGAGTTCGTGGGCCTCATCTTCCAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | GGAAATCGAATCCTGGTTTGTTATGGGCATCATGGAGCGGGGCTGTaGAATCTGCCAGCCATCGTAGAATGTGGGTTGGTAGGGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GNRILVCYGHHGAGL*NLPAIVECGLVGWR Trigger: CCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCCCGCTCCATGATGCCCATAACAAACCAGGATTCGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | CTCGGGCACTTGGGTAGTGTGTCAGAGACCTTGAGGATGGCGAGATaGTGCGTTCTGAGGTCATGTTATGTGGCTGTTCTGGAGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LGHLGSVSETLRMAR*CVLRSCYVAVLEET Trigger: GGTTTCCTCCAGAACAGCCACATAACATGACCTCAGAACGCAGCATCTCGCCATCCTCAAGGTCTCTGACACACTACCCAAGTGCCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | CTCCAGAATCTCCCCCTGTGCCACAGTCAGTTCCTGGGCATTCCTTaGTTCAAACTCGTACAGGACTTGCATTTTCAGGGCTGCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNLPLCHSQFLGIP*FKLVQDLHFQGCSA Trigger: GGCAGAGCAGCCCTGAAAATGCAAGTCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGATTCTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | CCACCATCGCTTGCTCTGATCCAGAACCTCCAGAATCTCCCCCTGTaGCACAGTCAGTTCCTGGGCATTCCTTGCTTCAAACTCGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSLALIQNLQNLPL*HSQFLGIPCFKLVQ Trigger: CTGTACGAGTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGATTCTGGAGGTTCTGGATCAGAGCAAGCGATGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | TGTAACCAGTCAGTCCTGCTTCGTTCTTCACCAGCCACCATCGCTTaGTCTGATCCAGAACCTCCAGAATCTCCCCCTGTGCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CNQSVLLRSSPATIA*SDPEPPESPPVPQS Trigger: TGACTGTGGCACAGGGGGAGATTCTGGAGGTTCTGGATCAGAGCAAGCGATGGTGGCTGGTGAAGAACGAAGCAGGACTGACTGGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | TGGCAGGGGCTCCAGGATATTGCTGGGAATGTAACCAGTCAGTCCTaGTTCGTTCTTCACCAGCCACCATCGCTTGCTCTGATCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WQGLQDIAGNVTSQS*FVLHQPPSLALIQN Trigger: GTTCTGGATCAGAGCAAGCGATGGTGGCTGGTGAAGAACGAAGCAGGACTGACTGGTTACATTCCCAGCAATATCCTGGAGCCCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | TGTAGGCTGCTCCTCATCCTAGAACCTCGGAGGGAAATCGAATCCTaGTTTGTTATGGGCATCATGGAGCGGGGCTGTGGAATCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLLLILEPRREIES*FVMGIMERGCGICQ Trigger: CTGGCAGATTCCACAGCCCCGCTCCATGATGCCCATAACAAACCAGGATTCGATTTCCCTCCGAGGTTCTAGGATGAGGAGCAGCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | CTGGGGCTGGAGAGTGGGAGGTTTGAGTCCTCGTATTCAGGGTTATaGTTGTATGGCTCATCCCGAGGGAAATGTAGGCTGCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LGLESGRFESSYSGL*LYGSSRGKCRLLLI Trigger: GATGAGGAGCAGCCTACATTTCCCTCGGGATGAGCCATACAACCATAACCCTGAATACGAGGACTCAAACCTCCCACTCTCCAGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 90 bp | AGTGGCCTTTCCAGAGGAGGCCCCTTCCATCTGTCCTGGCTTGGATaGTGGACTCCAAATCGAGGTCTTTCTTCTAGCTCTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLSRGGPFHLSWLG*WTPNRGLSSSSSSR Trigger: CCTGGAAGAAGAGCTAGAAGAAAGACCTCGATTTGGAGTCCATCATCCAAGCCAGGACAGATGGAAGGGGCCTCCTCTGGAAAGGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | ACTCTCTGTGTCCCCAGCTTACATGTCATCAGATGCTCCACCCTGTaGTGTAGGAGGGTAGGTTCTGAGGCCATACTCTGGGAATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLCVPSLHVIRCSTL*CRRVGSEAILWEYS Trigger: GGAATATTCCCAGAGTATGGCCTCAGAACCTACCCTCCTACAGCACAGGGTGGAGCATCTGATGACATGTAAGCTGGGGACACAGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | CTGCGTTCTGAGGTCATGTTATGTGGCTGTTCTGGAGGAAACCTATaGTCTGGAGAGAACCTCTGCTCCAGAGGGGGTGCCTGTTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: LRSEVMLCGCSGGNL*SGENLCSRGGACCI Trigger: TATACAACAGGCACCCCCTCTGGAGCAGAGGTTCTCTCCAGAGCATAGGTTTCCTCCAGAACAGCCACATAACATGACCTCAGAACGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 90 bp | GGGCACTTGGGTAGTGTGTCAGAGACCTTGAGGATGGCGAGATGCTaGGTTCTGAGGTCATGTTATGTGGCTGTTCTGGAGGAAACCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSVSETLRMARC*VLRSCYVAVLEETY Trigger: ATAGGTTTCCTCCAGAACAGCCACATAACATGACCTCAGAACGCAGCATCTCGCCATCCTCAAGGTCTCTGACACACTACCCAAGTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | GAGGGTCTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATTGGAGAGTGGGAGGTTaGAGTCCTCGTATTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGLQPNEVPFASVSGPVHWRVGG*SPRIQG Trigger: ACCCTGAATACGAGGACTCAAACCTCCCACTCTCCA...ATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAGACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTGCTCTGTAGGGCATCCTTaGGCTCCCGGACTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVWTCSSSLLCDPGYVACSVGHP*APGLSV Trigger: CACAGAGAGTCCGGGAGCCAAAGGATGCCCTACAGA...GCAAGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | CCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGAGTGTGTCAGAGACCTaGAGGATGGCGAGATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PMRYHLPQCLDLFIFFALSVSET*RMARCC Trigger: GCAGCATCTCGCCATCCTCAAGGTCTCTGACACACT...CAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | CTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTGTTCCTGGGCATTCCTaGCTTCAAACTCGTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQPNEVPFASVSGPVHLLVPGHS*LQTRTG Trigger: TCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAAC...AAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | CTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGTGATCCAGGATATGTGGCTTCCATCTGTCCTGGCTaGGATGATGGACTCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSVWTCSSSLLCDPGYVASICPG*DDGLQI Trigger: GATTTGGAGTCCATCATCCAAGCCAGGACAGATGGA...AGCCACATATCCTGGATCACAAAGCAAAGAAGATGAACAGGTCCAGACACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGAGGCAGAGTGAAGCCATaGGGTTCTCGGGCACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRGRVKP*GSRALG Trigger: CCCAAGTGCCCGAGAACCCAATGGCTTCACTCTGCC...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | CTCCAACCCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTAGGTTGAAGCTCAACTaGATCTTCTGGAAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQPNEVPFASVSGPVHLLRLKLN*IFWKQS Trigger: TGACTGCTTCCAGAAGATCAAGTTGAGCTTCAACCT...AAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGGGTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 90 bp | CGCAAAGCCAGCTTCCCCAAGAGGTTGAAGCTCAACTTGATCTTCTaGAAGCAGTCAATGTACTCTGCTTGTGTTATCCCATTTTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: RKASFPKRLKLNLIF*KQSMYSACVIPFLD Trigger: GTCTAAAAATGGGATAACACAAGCAGAGTACATTGACTGCTTCCAGAAGATCAAGTTGAGCTTCAACCTCTTGGGGAAGCTGGCTTTGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | CCAATGAGGTACCATTTGCCTCAGTGTCTGGACCTGTTCATCTTCTTTGCTTTGGATAAATTTCAGGGTTaGGAAGATGAGGCCCACGAA | + |
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Preference number: 5 (lower is better) Translates to: PMRYHLPQCLDLFIFFALDKFQG*EDEAHE Trigger: TTCGTGGGCCTCATCTTCCAAACCCTGAAATTTATC...CAAAGCAAAGAAGATGAACAGGTCCAGACACTGAGGCAAATGGTACCTCATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS-3UTR CAA 90 bp | GTTAAACGATGCTTTTTATTGGCAGGATTGGGACTAAAGAGATCAGGAGTAAGAAAACTCGTACAGGACTaGCATTTTCAGGGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VKRCFLLAGLGLKRSGVRKLVQD*HFQGCS Trigger: AGAGCAGCCCTGAAAATGCAAGTCCTGTACGAGTTT...TCTTACTCCTGATCTCTTTAGTCCCAATCCTGCCAATAAAAAGCATCGTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | CATCCTTCTGACAGCGTCCAGCCGGGCCTGGATCCGTaGAGCCTCCTGTGGACACAGCATCTGCAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HPSDSVQPGLDP*SLLWTQHLQLP Trigger: GGGGAGCTGCAGATGCTGTGTCCACAGGAGGCTCCACGGATCCAGGCCCGGCTGGACGCTGTCAGAAGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | ATCCCCAGCATCCTTCTGACAGCGTCCAGCCGGGCCTaGATCCGTGGAGCCTCCTGTGGACACAGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: IPSILLTASSRA*IRGASCGHSIC Trigger: GCAGATGCTGTGTCCACAGGAGGCTCCACGGATCCAGGCCCGGCTGGACGCTGTCAGAAGGATGCTGGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | TGCCTGTCCAGTCAGCCCAGCTGGTGGTCCAGGATGTaGCTAGTGACTTCCAGAGTGTGTCCTCGGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CLSSQPSWWSRM*LVTSRVCPRVG Trigger: GCCCACCCGAGGACACACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 90 bp | CATGGAGCGGGGCTGTGGAATCTGCCAGCCATCGTAGAATGTGGGTaGGTAGGGTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HGAGLWNLPAIVECG*VGWRFTACPVSPAG Trigger: ACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCCCGCTCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | CCTCTGCTCCAGAGGGGGTGCCTGTTGTATAGGGAGTaGCCTTTCCAGAGGAGGCCCCTTCCATCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLLQRGCLLYRE*PFQRRPLPSVL Trigger: CAGGACAGATGGAAGGGGCCTCCTCTGGAAAGGCCACTCCCTATACAACAGGCACCCCCTCTGGAGCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | AGGGTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTaGTGGTCCAGGATGTGCCTAGTGACTTCCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RVAVHCLSSQPS*WSRMCLVTSRV Trigger: CACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | CATCGTAGAATGTGGGTTGGTAGGGTGGCGGTTCACTaGCTGTCCAGTCAGCCCAGCTGGTGGTCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: HRRMWVGRVAVH*LSSQPSWWSRM Trigger: CATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | GTGGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGTaGTCCAGGATGTGCCTAGTGACTTCCAGAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: VAVHCLSSQPSW*SRMCLVTSRVC Trigger: ACACACTCTGGAAGTCACTAGGCACATCCTGGACCACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | AGCGGGGCTGTGGAATCTGCCAGCCATCGTAGAATGTaGGTTGGTAGGGTGGCGGTTCACTGCCTGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGAVESASHRRM*VGRVAVHCLSS Trigger: ACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 72 bp | CTCTGGAGAGAACCTCTGCTCCAGAGGGGGTGCCTGTaGTATAGGGAGTGGCCTTTCCAGAGGAGGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LWREPLLQRGCL*YREWPFQRRPL Trigger: AAGGGGCCTCCTCTGGAAAGGCCACTCCCTATACAACAGGCACCCCCTCTGGAGCAGAGGTTCTCTCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 72 bp | GGGCTGTGGAATCTGCCAGCCATCGTAGAATGTGGGTaGGTAGGGTGGCGGTTCACTGCCTGTCCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GLWNLPAIVECG*VGWRFTACPVS Trigger: GCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 72 bp | TGTGGACACAGCATCTGCAGCTCCCCAGGTCTCATGTaGAGTAGCTGGCTTCCCATTAGGGACCCGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CGHSICSSPGLM*SSWLPIRDPRV Trigger: GACCCTCGGGTCCCTAATGGGAAGCCAGCTACTTCACATGAGACCTGGGGAGCTGCAGATGCTGTGTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | AATCTGCCAGCCATCGTAGAATGTGGGTTGGTAGGGTaGCGGTTCACTGCCTGTCCAGTCAGCCCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: NLPAIVECGLVG*RFTACPVSPAG Trigger: ACCAGCTGGGCTGACTGGACAGGCAGTGAACCGCCACCCTACCAACCCACATTCTACGATGGCTGGCAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 72 bp | GCTGGCTTCCCATTAGGGACCCGAGGGTCCTTACAGTaGCAGTGGAGAAGTTCTCTGCTTGTAGCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AGFPLGTRGSLQ*QWRSSLLVARL Trigger: CAGCCTGGCTACAAGCAGAGAACTTCTCCACTGTCACTGTAAGGACCCTCGGGTCCCTAATGGGAAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | AAGATGAGGCCCACGAACTCAGGGGCGCTTGTTTCCTaGATCCGCAAAGCCAGCTTCCCCAAGAGGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KMRPTNSGALVS*IRKASFPKRLK Trigger: CTTCAACCTCTTGGGGAAGCTGGCTTTGCGGATGCAGGAAACAAGCGCCCCTGAGTTCGTGGGCCTCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | GTCCCCAGCTTACATGTCATCAGATGCTCCACCCTGTaGTGTAGGAGGGTAGGTTCTGAGGCCATACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPSLHVIRCSTL*CRRVGSEAILW Trigger: CCAGAGTATGGCCTCAGAACCTACCCTCCTACAGCACAGGGTGGAGCATCTGATGACATGTAAGCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | CGGACTCTCTGTGTCCCCAGCTTACATGTCATCAGATaGTCCACCCTGTGCTGTAGGAGGGTAGGTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RTLCVPSLHVIR*STLCCRRVGSE Trigger: CTCAGAACCTACCCTCCTACAGCACAGGGTGGAGCATCTGATGACATGTAAGCTGGGGACACAGAGAGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | GAGGTCATGTTATGTGGCTGTTCTGGAGGAAACCTATaGTCTGGAGAGAACCTCTGCTCCAGAGGGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: EVMLCGCSGGNL*SGENLCSRGGA Trigger: GGCACCCCCTCTGGAGCAGAGGTTCTCTCCAGAGCATAGGTTTCCTCCAGAACAGCCACATAACATGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | TCAGTCCTGCTTCGTTCTTCACCAGCCACCATCGCTTaGTCTGATCCAGAACCTCCAGAATCTCCCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SVLLRSSPATIA*SDPEPPESPPV Trigger: CACAGGGGGAGATTCTGGAGGTTCTGGATCAGAGCAAGCGATGGTGGCTGGTGAAGAACGAAGCAGGACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 72 bp | TGGGTTCTCGGGCACTTGGGTAGTGTGTCAGAGACCTaGAGGATGGCGAGATGCTGCGTTCTGAGGTCATGT | + |
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Preference number: 6 (lower is better) Translates to: WVLGHLGSVSET*RMARCCVLRSC Trigger: ACATGACCTCAGAACGCAGCATCTCGCCATCCTCAAGGTCTCTGACACACTACCCAAGTGCCCGAGAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 90 bp | CCTCCAGAATCTCCCCCTGTGCCACAGTCAGTTCCTGGGCATTCCTaGCTTCAAACTCGTACAGGACTTGCATTTTCAGGGCTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PPESPPVPQSVPGHS*LQTRTGLAFSGLLC Trigger: GCAGAGCAGCCCTGAAAATGCAAGTCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGATTCTGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | CTCCTCATCCTAGAACCTCGGAGGGAAATCGAATCCTaGTTTGTTATGGGCATCATGGAGCGGGGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLILEPRREIES*FVMGIMERGCG Trigger: TCCACAGCCCCGCTCCATGATGCCCATAACAAACCAGGATTCGATTTCCCTCCGAGGTTCTAGGATGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | ACCTCCAGAATCTCCCCCTGTGCCACAGTCAGTTCCTaGGCATTCCTTGCTTCAAACTCGTACAGGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: TSRISPCATVSS*AFLASNSYRTC Trigger: GCAAGTCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGATTCTGGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 90 bp | GGGCTGGAGAGTGGGAGGTTTGAGTCCTCGTATTCAGGGTTATGGTaGTATGGCTCATCCCGAGGGAAATGTAGGCTGCTCCTCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: GLESGRFESSYSGLW*YGSSRGKCRLLLIL Trigger: TAGGATGAGGAGCAGCCTACATTTCCCTCGGGATGAGCCATACAACCATAACCCTGAATACGAGGACTCAAACCTCCCACTCTCCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 72 bp | TCCAGAGGAGGCCCCTTCCATCTGTCCTGGCTTGGATaGTGGACTCCAAATCGAGGTCTTTCTTCTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRGGPFHLSWLG*WTPNRGLSSSS Trigger: AGAGCTAGAAGAAAGACCTCGATTTGGAGTCCATCATCCAAGCCAGGACAGATGGAAGGGGCCTCCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | GGTAGTGTGTCAGAGACCTTGAGGATGGCGAGATGCTaGGTTCTGAGGTCATGTTATGTGGCTGTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GSVSETLRMARC*VLRSCYVAVLE Trigger: CTCCAGAACAGCCACATAACATGACCTCAGAACGCAGCATCTCGCCATCCTCAAGGTCTCTGACACACTACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | CTTGCTCTGATCCAGAACCTCCAGAATCTCCCCCTGTaGCACAGTCAGTTCCTGGGCATTCCTTGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LALIQNLQNLPL*HSQFLGIPCFK Trigger: TTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGATTCTGGAGGTTCTGGATCAGAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | ATCCTGGTTTGTTATGGGCATCATGGAGCGGGGCTGTaGAATCTGCCAGCCATCGTAGAATGTGGGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ILVCYGHHGAGL*NLPAIVECGLV Trigger: TACCAACCCACATTCTACGATGGCTGGCAGATTCCACAGCCCCGCTCCATGATGCCCATAACAAACCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 72 bp | GCCTTTCCAGAGGAGGCCCCTTCCATCTGTCCTGGCTaGGATGATGGACTCCAAATCGAGGTCTTTCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: AFPEEAPSICPG*DDGLQIEVFLL Trigger: TAGAAGAAAGACCTCGATTTGGAGTCCATCATCCAAGCCAGGACAGATGGAAGGGGCCTCCTCTGGAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 72 bp | TCTCCCCCTGTGCCACAGTCAGTTCCTGGGCATTCCTaGCTTCAAACTCGTACAGGACTTGCATTTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPPVPQSVPGHS*LQTRTGLAFSG Trigger: CCCTGAAAATGCAAGTCCTGTACGAGTTTGAAGCAAGGAATGCCCAGGAACTGACTGTGGCACAGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS GCA 72 bp | TTGGGTAGTGTGTCAGAGACCTTGAGGATGGCGAGATaGTGCGTTCTGAGGTCATGTTATGTGGCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGSVSETLRMAR*CVLRSCYVAVL Trigger: CAGAACAGCCACATAACATGACCTCAGAACGCAGCATCTCGCCATCCTCAAGGTCTCTGACACACTACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CAA 90 bp | TCCTGCATCCGCAAAGCCAGCTTCCCCAAGAGGTTGAAGCTCAACTaGATCTTCTGGAAGCAGTCAATGTACTCTGCTTGTGTTATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SCIRKASFPKRLKLN*IFWKQSMYSACVIP Trigger: TGGGATAACACAAGCAGAGTACATTGACTGCTTCCAGAAGATCAAGTTGAGCTTCAACCTCTTGGGGAAGCTGGCTTTGCGGATGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS TCA 72 bp | GAAATCACTTTGGCTGGAAGGCCAGCCTCAGGGCACTaGGATAGGATAAATTTCAGGGTTTGGAAGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: EITLAGRPASGH*DRINFRVWKMR Trigger: CCTCATCTTCCAAACCCTGAAATTTATCCTATCTCAGTGCCCTGAGGCTGGCCTTCCAGCCAAAGTGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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| CDS CCA 72 bp | AGCTTCCCCAAGAGGTTGAAGCTCAACTTGATCTTCTaGAAGCAGTCAATGTACTCTGCTTGTGTTATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SFPKRLKLNLIF*KQSMYSACVIP Trigger: TGGGATAACACAAGCAGAGTACATTGACTGCTTCCAGAAGATCAAGTTGAGCTTCAACCTCTTGGGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037375.10 |
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