Pregenerated sensors for EPOR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006235Ensembl transcript IDs: ENSMUST00000006397.7, ENSMUST00000213181.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCCCTGGGTCCCCAGCCTaGGTCACTGCCCAGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RLSLPAQRAKVSSDFKYGPGSPA*VTAQRG Trigger: GCCACGCTGGGCAGTGACTCAGGCTGGGGACCCAGG...GCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGTGGCTGCCCTCTTCTaGCCGGCGCGCCAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QGCLFLLRGPRSALTLSMVAALF*PARQQP Trigger: GGGCTGCTGGCGCGCCGGGCAGAAGAGGGCAGCCAC...CATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGGCAGCACCACGTGGCTaGCCTCTTCTGCCCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: IARLSLPAQRAKVSSDFKAAPRG*PLLPGA Trigger: CGCGCCGGGCAGAAGAGGGCAGCCACGTGGTGCTGC...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | TTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTCCTCAGGGAAGGAGCTaGCCGGGCTCCACCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: LTLQGCLFLLRGPRSALTPQGRS*PGSTTD Trigger: GTCTGTGGTGGAGCCCGGGCAGCTCCTTCCCTGAGG...AGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACTGCCCCCAGGCCCTaGGAGGTTCTCACTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LSLPAQRAKVSSDFKYGFTAPRP*EVLTAW Trigger: CCATGCAGTGAGAACCTCTCAGGGCCTGGGGGCAGT...GAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGCTCAAAGCTGGAAGGTaGGGTGCCCTCTGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IARLSLPAQRAKVSSDFKLKAGR*GALWPG Trigger: CCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAG...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGCCTTTGTGTCCCTCCTaGCCGGTTGCCTGCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: IARLSLPAQRAKVSSDFKPLCPS*PVACRH Trigger: GTGTCGGCAGGCAACCGGGCAGGAGGGACACAAAGG...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCCCAGGCCAGATCTTCTaGTGCAGAGTCCGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSLPAQRAKVSSDFKYGFPGQIF*CRVRRW Trigger: CCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGG...GAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGCCTGGGCATGCTCACTaGCCACCGGCTCCAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: QGCLFLLRGPRSALTLSMPGHAH*PPAPVR Trigger: CCTTACTGGAGCCGGTGGGCAGTGAGCATGCCCAGG...CATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | GCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATTCACAGGGTCCACACTaGCCCCAGGCCCTGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ARLSLPAQRAKVSSDFKYSQGPH*PQALRG Trigger: ACCTCTCAGGGCCTGGGGGCAGTGTGGACCCTGTGA...ATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACAGCTGGAAGGTGAGGTaGCCTCTGGCCTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LNIARLSLPAQRAKVSSDSWKVR*PLAWAL Trigger: CAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCT...GTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | AATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTAGGTGCTCCAGGAGGTaGCAGCCAGCGCAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: NLNIARLSLPAQRAKVSSRCSRR*QPAQHH Trigger: GTGGTGCTGCGCTGGCTGCCACCTCCTGGAGCACCT...AGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACGAGGTTCTCACTGCATaGGGTCCGGGGCAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: LNIARLSLPAQRAKVSSDEVLTA*GPGQQP Trigger: TGGTTGCTGCCCCGGACCCCATGCAGTGAGAACCTC...GTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | ACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCTTCGGAGCCCCGGGATaGCAGCAGGGCCGCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLNLNIARLSLPAQRAKVFGAPG*QQGRFA Trigger: AGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAA...GACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CAGATAACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCGGGCCCCTCATCATCTaGCCCTGGGTCCCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QITLNLNIARLSLPAQRAGPLII*PWVPSL Trigger: CAGGCTGGGGACCCAGGGGCAGATGATGAGGGGCCC...GGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGTTATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGAGGTGCCCTCTGGCCTaGGCTTTGAGGCCAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IARLSLPAQRAKVSSDFKRCPLA*ALRPSQ Trigger: CTGACTTGGCCTCAAAGCCCAGGCCAGAGGGCACCT...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGGTCCGCTGTTGGCAGTaGACACCAGAAACGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: IARLSLPAQRAKVSSDFKVRCWQ*TPETHG Trigger: TCCGTGCGTTTCTGGTGTTCACTGCCAACAGCGGAC...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGTAGGGGCCATCAGATaGGTCCCCGTGGACTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLILTLQGCLFLLRGPRSVGAIR*VPVDSL Trigger: CAGGGAGTCCACGGGGACTCATCTGATGGCCCCTAC...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | AATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGTGGGTGGTCATAGGTaGTCCAGGAGGTGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NLNIARLSLPAQRAKVSSVGGHR*SRRWQP Trigger: TGGCTGCCACCTCCTGGAGCACCTATGACCACCCAC...AGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CAGATAACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCTGCAGAGTCCGGCGGTaGGACAGCAGGGCCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: QITLNLNIARLSLPAQRACRVRR*DSRART Trigger: GGTTCTGGCCCTGCTGTCCCACCGCCGGACTCTGCA...GGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGTTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCCTCGCTCTCTGGGCTTaGGATGCCAGGCCAGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LSLPAQRAKVSSDFKYGFLALWA*DARPDL Trigger: AAGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGAG...GAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCCTCAAACTCGCTCTCTaGGCTTGGGATGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLPAQRAKVSSDFKYGFLKLAL*AWDARP Trigger: TGGCCTGGCATCCCAAGCCCAGAGAGCGAGTTTGAG...GAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCGAGAGGACCTCTAGGTaGGCAGGTGGATCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPIERTSR*AGGSSG Trigger: CCCTGAGGATCCACCTGCCCACCTAGAGGTCCTCTC...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCCTCATCATCTGCCCCTaGGTCCCCAGCCTGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPILIICP*VPSLSH Trigger: GTGACTCAGGCTGGGGACCCAGGGGCAGATGATGAG...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTCAAGTGAGGTGGAGTaGGAGGTAGCTCGGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTLQGCLFLLRGPRSALTSSEVE*EVAREA Trigger: TGCCTCCCGAGCTACCTCCCACTCCACCTCACTTGA...AGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCATCCCGCCCCGCAGGTTaGTCAGAACACACTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLILTLQGCLFLLRGPRSSRPAG*SEHTQC Trigger: GCACTGAGTGTGTTCTGAGCAACCTGCGGGGCGGGA...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCTCAGAACACACTCAGTaGGGCCTTCCAGGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPISEHTQ*GLPGPP Trigger: TGGAGGTCCTGGAAGGCCGCACTGAGTGTGTTCTGA...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CAGATAACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCCTGAGAGGTTCTCACTaGATGGGGTCCGGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QITLNLNIARLSLPAQRALRGSH*MGSGAA Trigger: TGCTGCCCCGGACCCCATGCAGTGAGAACCTCTCAG...GGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGTTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCACTTTGCTCTCAAACTTaGGGTCCGGGAGGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLILTLQGCLFLLRGPRSLCSQT*GPGGWV Trigger: CACCCAGCCTCCCGGACCCCAAGTTTGAGAGCAAAG...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCTGCAGCAGCCACAGCTaGAAGTTACCCTTGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPICSSHS*KLPLWV Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGCTGCA...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | TTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTATAGGTACTTCAAGTaGGGTGGAGTGGGAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LTLQGCLFLLRGPRSALTYRYFK*GGVGGS Trigger: GCTACCTCCCACTCCACCTCACTTGAAGTACCTATA...AGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | TTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTTCTCTGGGCTTGGGATaGCAGGCCAGATCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LILTLQGCLFLLRGPRSASLGLG*QARSSA Trigger: AGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGA...AGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR GCA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAAGACAACCATCACGCTaGAGCAGCCACAGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLILTLQGCLFLLRGPRSRQPSR*SSHSWK Trigger: CTTCCAGCTGTGGCTGCTGCAGCGTGATGGTTGTCT...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCTGGTGTACTCAAAGCTaGAAGGTGAGGTGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPIWCTQS*KVRCPL Trigger: CAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCA...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCAGCTGGGGTCCAGGATaGTGTACTCAAAGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPISWGPG*CTQSWK Trigger: CTTCCAGCTTTGAGTACACCATCCTGGACCCCAGCT...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR TCA 90 bp | TTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCACCAATCACCCTCGAGCTGGTATaGGAAGCTGTAGTTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FLLRGPRSALTLSMASPITLELV*EAVVEV Trigger: GACTTCAACTACAGCTTCTCATACCAGCTCGAGGGT...GATTGGTGAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACAAGTCTTCCAAGCGTTaGGTGAAGCACAGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LNIARLSLPAQRAKVSSDKSSKR*VKHRSS Trigger: AGAACTTCTGTGCTTCACCCAACGCTTGGAAGACTT...GTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGACTTCATATCGGATGTaGGTGGTCATAGGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QGCLFLLRGPRSALTLSMTSYRM*VVIGAP Trigger: TGGAGCACCTATGACCACCCACATCCGATATGAAGT...CATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CCA 90 bp | ACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCTGGAAGTTACCCTTGTaGGTGGTGAAGAGACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLNLNIARLSLPAQRAKVWKLPL*VVKRPS Trigger: TGAGGGTCTCTTCACCACCCACAAGGGTAACTTCCA...GACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | CTTCGGAGCCCCGGGATGCCAGCAGGGCCGCTTTGCTCTCAAACTTaGGGTCCGGGAGGCTGGGTGAAGGTGCCCAGGCTGCCCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LRSPGMPAGPLCSQT*GPGGWVKVPRLPQQ Trigger: TTGCTGGGGCAGCCTGGGCACCTTCACCCAGCCTCCCGGACCCCAAGTTTGAGAGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 90 bp | CGGTCAGTAGTGACGCGGGCTCAGACCAGGCACTCCAGAATCCGCTaGAGCTCGGCTCGGCCATGCGCGCTCGAACAGCGAAGGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RSVVTRAQTRHSRIR*SSARPCALEQRRCS Trigger: GCTACACCTTCGCTGTTCGAGCGCGCATGGCCGAGCCGAGCTTCAGCGGATTCTGGAGTGCCTGGTCTGAGCCCGCGTCACTACTGACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 90 bp | AGCACAGAAGTTCTTCGGAGCCCCGGGATGCCAGCAGGGCCGCTTTaGTCTCAAACTTGGGGTCCGGGAGGCTGGGTGAAGGTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: STEVLRSPGMPAGPL*SQTWGPGGWVKVPR Trigger: CCTGGGCACCTTCACCCAGCCTCCCGGACCCCAAGTTTGAGAGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAAGAACTTCTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 90 bp | TGCGCGCTCGAACAGCGAAGGTGTAGCGCGTCCCGCCCCGCAGGTTaGTCAGAACACACTCAGTGCGGCCTTCCAGGACCTCCACCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CALEQRRCSASRPAG*SEHTQCGLPGPPPF Trigger: AAAGGGTGGAGGTCCTGGAAGGCCGCACTGAGTGTGTTCTGAGCAACCTGCGGGGCGGGACGCGCTACACCTTCGCTGTTCGAGCGCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | GGGCTTGGGATGCCAGGCCAGATCTTCTGCTGCAGAGTCCGGCGGTaGGACAGCAGGGCCAGAACCGTCAGCAACAGCGAGATGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: GLGMPGQIFCCRVRR*DSRARTVSNSEMRT Trigger: GGTCCTCATCTCGCTGTTGCTGACGGTTCTGGCCCTGCTGTCCCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | GAGGCAGTGCCCGAGGGCACAGGAGCTGAGAGCTGGGGTCCAGGATaGTGTACTCAAAGCTGGAAGGTGAGGTGCCCTCTGGCCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: EAVPEGTGAESWGPG*CTQSWKVRCPLAWA Trigger: AGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCATCCTGGACCCCAGCTCTCAGCTCCTGTGCCCTCGGGCACTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 90 bp | CTGCAGCTCCAGCGGCACAAAACTCGATGTGTCCGCTGTTGGCAGTaGACACCAGAAACGCACGGAGCCGCGGACGGTGGGAGCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LQLQRHKTRCVRCWQ*TPETHGAADGGSLV Trigger: CACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGCCAACAGCGGACACATCGAGTTTTGTGCCGCTGGAGCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 90 bp | CTGAGAGGACCTCTAGGTGGGCAGGTGGATCCTCAGGGAAGGAGCTaGCCGGGCTCCACCACAGACAACCATCACGCTGCAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRGPLGGQVDPQGRS*PGSTTDNHHAAAAT Trigger: TGTGGCTGCTGCAGCGTGATGGTTGTCTGTGGTGGAGCCCGGGCAGCTCCTTCCCTGAGGATCCACCTGCCCACCTAGAGGTCCTCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | GAGGTAGCTCGGGAGGCAGTGCCCGAGGGCACAGGAGCTGAGAGCTaGGGTCCAGGATGGTGTACTCAAAGCTGGAAGGTGAGGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVAREAVPEGTGAES*GPGWCTQSWKVRCP Trigger: AGGGCACCTCACCTTCCAGCTTTGAGTACACCATCCTGGACCCCAGCTCTCAGCTCCTGTGCCCTCGGGCACTGCCTCCCGAGCTACCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | CCGCTGTTGGCAGTGAACACCAGAAACGCACGGAGCCGCGGACGGTaGGAGCCTGGTGCAGGCTACATGACTTTCGTGACTCACCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLLAVNTRNARSRGR*EPGAGYMTFVTHPR Trigger: TCGAGGGTGAGTCACGAAAGTCATGTAGCCTGCACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGCCAACAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS CCA 90 bp | GGCAGTGAACACCAGAAACGCACGGAGCCGCGGACGGTGGGAGCCTaGTGCAGGCTACATGACTTTCGTGACTCACCCTCGAGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSEHQKRTEPRTVGA*CRLHDFRDSPSSWY Trigger: ATACCAGCTCGAGGGTGAGTCACGAAAGTCATGTAGCCTGCACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS CCA 90 bp | ACCCTTGTGGGTGGTGAAGAGACCCTCAAACTCGCTCTCTGGGCTTaGGATGCCAGGCCAGATCTTCTGCTGCAGAGTCCGGCGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLVGGEETLKLALWA*DARPDLLLQSPAVG Trigger: TCCCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | GGCACAGGAGCTGAGAGCTGGGGTCCAGGATGGTGTACTCAAAGCTaGAAGGTGAGGTGCCCTCTGGCCTGGGCTTTGAGGCCAAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTGAESWGPGWCTQS*KVRCPLAWALRPSQ Trigger: CTGACTTGGCCTCAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCATCCTGGACCCCAGCTCTCAGCTCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 90 bp | CATCACGCTGCAGCAGCCACAGCTGGAAGTTACCCTTGTGGGTGGTaGAGAGACCCTCAAACTCGCTCTCTGGGCTTGGGATGCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HHAAAATAGSYPCGW*RDPQTRSLGLGCQA Trigger: GGCCTGGCATCCCAAGCCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGCTGCAGCGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 90 bp | AGTGAACACCAGAAACGCACGGAGCCGCGGACGGTGGGAGCCTGGTaGAGGCTACATGACTTTCGTGACTCACCCTCGAGCTGGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEHQKRTEPRTVGAW*RLHDFRDSPSSWYE Trigger: CTCATACCAGCTCGAGGGTGAGTCACGAAAGTCATGTAGCCTGCACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 90 bp | GCAACCACTTATCCAATACCAAGTAGGTGTCCTGGGCATGCTCACTaGCCACCGGCTCCAGTAAGGGCCCCTCATCATCTGCCCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATTYPIPSRCPGHAH*PPAPVRAPHHLPLG Trigger: ACCCAGGGGCAGATGATGAGGGGCCCTTACTGGAGCCGGTGGGCAGTGAGCATGCCCAGGACACCTACTTGGTATTGGATAAGTGGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | GAAGTTACCCTTGTGGGTGGTGAAGAGACCCTCAAACTCGCTCTCTaGGCTTGGGATGCCAGGCCAGATCTTCTGCTGCAGAGTCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVTLVGGEETLKLAL*AWDARPDLLLQSPA Trigger: CGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGTAACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | CAGAATCGGACACCACAAGGTATAGGTACTTCAAGTGAGGTGGAGTaGGAGGTAGCTCGGGAGGCAGTGCCCGAGGGCACAGGAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QNRTPQGIGTSSEVE*EVAREAVPEGTGAE Trigger: CTCAGCTCCTGTGCCCTCGGGCACTGCCTCCCGAGCTACCTCCCACTCCACCTCACTTGAAGTACCTATACCTTGTGGTGTCCGATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 90 bp | GTTGAGATGCCAGAATCGGACACCACAAGGTATAGGTACTTCAAGTaGGGTGGAGTGGGAGGTAGCTCGGGAGGCAGTGCCCGAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEMPESDTTRYRYFK*GGVGGSSGGSARGH Trigger: GTGCCCTCGGGCACTGCCTCCCGAGCTACCTCCCACTCCACCTCACTTGAAGTACCTATACCTTGTGGTGTCCGATTCTGGCATCTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | CTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACGTCCCGCCCCGCAGGTaGCTCAGAACACACTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNIARLSLPAQRAKVSSDVPPRR*LRTHSV Trigger: CACTGAGTGTGTTCTGAGCAACCTGCGGGGCGGGAC...GTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | CTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGTATGGCTTCCCTCTGGCCTGGGCTTaGAGGCCAAGTCAGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLPAQRAKVSSDFKYGFPLAWA*RPSQTG Trigger: GCCCGTCTGACTTGGCCTCAAAGCCCAGGCCAGAGG...GAAGCCATACTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 90 bp | CCAGGATGGTGTACTCAAAGCTGGAAGGTGAGGTGCCCTCTGGCCTaGGCTTTGAGGCCAAGTCAGACGGGCAGGAAGATGTTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGWCTQSWKVRCPLA*ALRPSQTGRKMFLK Trigger: CTTCAGAAACATCTTCCTGCCCGTCTGACTTGGCCTCAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | ATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTCTGACTTTAAGACTCGCTCTCTGGGCTaGGGATGCCAGGCCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: IARLSLPAQRAKVSSDFKTRSLG*GCQARS Trigger: AGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGAGT...CTTAAAGTCAGAGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 90 bp | ATGACTTTCGTGACTCACCCTCGAGCTGGTATGAGAAGCTGTAGTTaGAGTCCATCCCGGAGCTCGCCGCTTCCTCCCAGAAACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: MTFVTHPRAGMRSCS*SPSRSSPLPPRNTP Trigger: TGGTGTGTTTCTGGGAGGAAGCGGCGAGCTCCGGGATGGACTTCAACTACAGCTTCTCATACCAGCTCGAGGGTGAGTCACGAAAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | TTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCAGCTTCGATGTGTCCGCTGTaGGCAGTGAACACCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LILTLQGCLFLLRGPRSASMCPL*AVNTRN Trigger: GTTTCTGGTGTTCACTGCCAACAGCGGACACATCGA...AGCTGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | CAGATAACTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: QITLNLNIARLSLPAQRASWKLP*WVVKRP Trigger: GGGTCTCTTCACCACCCACAAGGGTAACTTCCAGCT...GGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAGTTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCACAAGTCTTCCAAGCGTaGGGTGAAGCACAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLILTLQGCLFLLRGPRSQVFQA*GEAQKF Trigger: GAACTTCTGTGCTTCACCCAACGCTTGGAAGACTTG...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS-3UTR CAA 90 bp | CTCTTAATCTTAACATTGCAAGGCTGTCTCTTCCTGCTCAGAGGGCCAAGGTCACCGAACTGTAATCTGTaGAGATGCCAGAATCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLILTLQGCLFLLRGPRSPNCNL*RCQNRT Trigger: TGTCCGATTCTGGCATCTCAACAGATTACAGTTCGG...TGACCTTGGCCCTCTGAGCAGGAAGAGACAGCCTTGCAATGTTAAGATTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | GGTGCTCCAGGAGGTGGCAGCCAGCGCAGCACCACGTaGCTGCCCTCTTCTGCCCGGCGCGCCAGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAPGGGSQRSTT*LPSSARRASSP Trigger: GGGGCTGCTGGCGCGCCGGGCAGAAGAGGGCAGCCACGTGGTGCTGCGCTGGCTGCCACCTCCTGGAGCACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 72 bp | GTTCTTCGGAGCCCCGGGATGCCAGCAGGGCCGCTTTaGTCTCAAACTTGGGGTCCGGGAGGCTGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLRSPGMPAGPL*SQTWGPGGWVK Trigger: CTTCACCCAGCCTCCCGGACCCCAAGTTTGAGAGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAAGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 72 bp | CTCTCTGGGCTTGGGATGCCAGGCCAGATCTTCTGCTaGAGAGTCCGGCGGTGGGACAGCAGGGCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSGLGMPGQIFC*RVRRWDSRART Trigger: GGTTCTGGCCCTGCTGTCCCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 72 bp | TCGCTCTCTGGGCTTGGGATGCCAGGCCAGATCTTCTaGTGCAGAGTCCGGCGGTGGGACAGCAGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLSGLGMPGQIF*CRVRRWDSRAR Trigger: TCTGGCCCTGCTGTCCCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 72 bp | CAGAAACGCACGGAGCCGCGGACGGTGGGAGCCTGGTaGAGGCTACATGACTTTCGTGACTCACCCTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QKRTEPRTVGAW*RLHDFRDSPSS Trigger: GCTCGAGGGTGAGTCACGAAAGTCATGTAGCCTGCACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 72 bp | GAACAGCGAAGGTGTAGCGCGTCCCGCCCCGCAGGTTaGTCAGAACACACTCAGTGCGGCCTTCCAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: EQRRCSASRPAG*SEHTQCGLPGP Trigger: AGGTCCTGGAAGGCCGCACTGAGTGTGTTCTGAGCAACCTGCGGGGCGGGACGCGCTACACCTTCGCTGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 72 bp | CCTCTAGGTGGGCAGGTGGATCCTCAGGGAAGGAGCTaGCCGGGCTCCACCACAGACAACCATCACGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLGGQVDPQGRS*PGSTTDNHHAA Trigger: TGCAGCGTGATGGTTGTCTGTGGTGGAGCCCGGGCAGCTCCTTCCCTGAGGATCCACCTGCCCACCTAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | ATGCCAGGCCAGATCTTCTGCTGCAGAGTCCGGCGGTaGGACAGCAGGGCCAGAACCGTCAGCAACAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: MPGQIFCCRVRR*DSRARTVSNSE Trigger: CTCGCTGTTGCTGACGGTTCTGGCCCTGCTGTCCCACCGCCGGACTCTGCAGCAGAAGATCTGGCCTGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CAA 72 bp | AGTTCTTCGGAGCCCCGGGATGCCAGCAGGGCCGCTTaGCTCTCAAACTTGGGGTCCGGGAGGCTGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSEPRDASRAA*LSNLGSGRLGE Trigger: TTCACCCAGCCTCCCGGACCCCAAGTTTGAGAGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAAGAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CAA 90 bp | CCGTCACCTGCAGCTCCAGCGGCACAAAACTCGATGTGTCCGCTGTaGGCAGTGAACACCAGAAACGCACGGAGCCGCGGACGGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPAAPAAQNSMCPL*AVNTRNARSRGRWE Trigger: CTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGCCAACAGCGGACACATCGAGTTTTGTGCCGCTGGAGCTGCAGGTGACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 72 bp | CCAGGACCTCCACCCTTTGTGTCCCTCCTGCCCGGTTaGCTGCCGACACGTCCACTTCATATCGGATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPPPFVSLLPG*LPTRPLHIGCG Trigger: CCCACATCCGATATGAAGTGGACGTGTCGGCAGGCAACCGGGCAGGAGGGACACAAAGGGTGGAGGTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | ATATCGGATGTGGGTGGTCATAGGTGCTCCAGGAGGTaGCAGCCAGCGCAGCACCACGTGGCTGCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISDVGGHRCSRR*QPAQHHVAALF Trigger: GAAGAGGGCAGCCACGTGGTGCTGCGCTGGCTGCCACCTCCTGGAGCACCTATGACCACCCACATCCGATAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS GCA 72 bp | CACGTCCACTTCATATCGGATGTGGGTGGTCATAGGTaGTCCAGGAGGTGGCAGCCAGCGCAGCACCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVHFISDVGGHR*SRRWQPAQHHV Trigger: CACGTGGTGCTGCGCTGGCTGCCACCTCCTGGAGCACCTATGACCACCCACATCCGATATGAAGTGGACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS GCA 72 bp | GACCTCCACCCTTTGTGTCCCTCCTGCCCGGTTGCCTaGCGACACGTCCACTTCATATCGGATGTGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DLHPLCPSCPVA*RHVHFISDVGG Trigger: ACCACCCACATCCGATATGAAGTGGACGTGTCGGCAGGCAACCGGGCAGGAGGGACACAAAGGGTGGAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | GCAGTGAACACCAGAAACGCACGGAGCCGCGGACGGTaGGAGCCTGGTGCAGGCTACATGACTTTCGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: AVNTRNARSRGR*EPGAGYMTFVT Trigger: AGTCACGAAAGTCATGTAGCCTGCACCAGGCTCCCACCGTCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS CCA 72 bp | GCTGAGAGCTGGGGTCCAGGATGGTGTACTCAAAGCTaGAAGGTGAGGTGCCCTCTGGCCTGGGCTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AESWGPGWCTQS*KVRCPLAWALR Trigger: CCTCAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCATCCTGGACCCCAGCTCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CAA 72 bp | GCAGCTCCAGCGGCACAAAACTCGATGTGTCCGCTGTaGGCAGTGAACACCAGAAACGCACGGAGCCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPAAQNSMCPL*AVNTRNARSRG Trigger: TCCGCGGCTCCGTGCGTTTCTGGTGTTCACTGCCAACAGCGGACACATCGAGTTTTGTGCCGCTGGAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006397.7 ENSMUST00000213181.2 |
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| CDS CAA 72 bp | TCCAGGACCTCCACCCTTTGTGTCCCTCCTGCCCGGTaGCCTGCCGACACGTCCACTTCATATCGGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTSTLCVPPAR*PADTSTSYRMW Trigger: CCACATCCGATATGAAGTGGACGTGTCGGCAGGCAACCGGGCAGGAGGGACACAAAGGGTGGAGGTCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS TCA 72 bp | CTAGGAGCAGGCCACATAGCCGGGATGCAGAGGCTCTaGGTCTGGGACAAGGCTGTTCTCATAGGGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGAGHIAGMQRL*VWDKAVLIGVG Trigger: TCCCACCCCTATGAGAACAGCCTTGTCCCAGACTCAGAGCCTCTGCATCCCGGCTATGTGGCCTGCTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS GCA 72 bp | TTGGGTGAAGCACAGAAGTTCTTCGGAGCCCCGGGATaGCAGCAGGGCCGCTTTGCTCTCAAACTTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGEAQKFFGAPG*QQGRFALKLGV Trigger: GACCCCAAGTTTGAGAGCAAAGCGGCCCTGCTGGCATCCCGGGGCTCCGAAGAACTTCTGTGCTTCACCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | GGTGGTGAAGAGACCCTCAAACTCGCTCTCTGGGCTTaGGATGCCAGGCCAGATCTTCTGCTGCAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GGEETLKLALWA*DARPDLLLQSP Trigger: CGGACTCTGCAGCAGAAGATCTGGCCTGGCATCCCAAGCCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS CAA 90 bp | CACAGACAACCATCACGCTGCAGCAGCCACAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGACCCTCAAACTCGCTCTCTGGGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRQPSRCSSHSWKLP*WVVKRPSNSLSGLG Trigger: CCCAAGCCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGCTGCAGCGTGATGGTTGTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS TCA 72 bp | GTGACTCACCCTCGAGCTGGTATGAGAAGCTGTAGTTaGAGTCCATCCCGGAGCTCGCCGCTTCCTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTHPRAGMRSCS*SPSRSSPLPPR Trigger: TCTGGGAGGAAGCGGCGAGCTCCGGGATGGACTTCAACTACAGCTTCTCATACCAGCTCGAGGGTGAGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS CCA 72 bp | TCACGCTGCAGCAGCCACAGCTGGAAGTTACCCTTGTaGGTGGTGAAGAGACCCTCAAACTCGCTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRCSSHSWKLPL*VVKRPSNSLSG Trigger: CCCAGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGCTGCAGCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS CCA 72 bp | TGTACTCAAAGCTGGAAGGTGAGGTGCCCTCTGGCCTaGGCTTTGAGGCCAAGTCAGACGGGCAGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CTQSWKVRCPLA*ALRPSQTGRKM Trigger: CATCTTCCTGCCCGTCTGACTTGGCCTCAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS CCA 72 bp | ACACCACAAGGTATAGGTACTTCAAGTGAGGTGGAGTaGGAGGTAGCTCGGGAGGCAGTGCCCGAGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TPQGIGTSSEVE*EVAREAVPEGT Trigger: TGTGCCCTCGGGCACTGCCTCCCGAGCTACCTCCCACTCCACCTCACTTGAAGTACCTATACCTTGTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS GCA 72 bp | TATCCAATACCAAGTAGGTGTCCTGGGCATGCTCACTaGCCACCGGCTCCAGTAAGGGCCCCTCATCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPIPSRCPGHAH*PPAPVRAPHHL Trigger: CAGATGATGAGGGGCCCTTACTGGAGCCGGTGGGCAGTGAGCATGCCCAGGACACCTACTTGGTATTGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
||
| CDS CAA 72 bp | CGCTTCCTCCCAGAAACACACCAAGTCTTCCAAGCGTaGGGTGAAGCACAGAAGTTCTTCGGAGCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: RFLPETHQVFQA*GEAQKFFGAPG Trigger: TCCCGGGGCTCCGAAGAACTTCTGTGCTTCACCCAACGCTTGGAAGACTTGGTGTGTTTCTGGGAGGAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CAA 72 bp | CCATCACGCTGCAGCAGCCACAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGACCCTCAAACTCGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSRCSSHSWKLP*WVVKRPSNSLS Trigger: AGAGAGCGAGTTTGAGGGTCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGCTGCAGCGTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CCA 72 bp | GCTTCCTCCCAGAAACACACCAAGTCTTCCAAGCGTTaGGTGAAGCACAGAAGTTCTTCGGAGCCCCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: ASSQKHTKSSKR*VKHRSSSEPRD Trigger: ATCCCGGGGCTCCGAAGAACTTCTGTGCTTCACCCAACGCTTGGAAGACTTGGTGTGTTTCTGGGAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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| CDS CAA 90 bp | TGGTGTACTCAAAGCTGGAAGGTGAGGTGCCCTCTGGCCTGGGCTTaGAGGCCAAGTCAGACGGGCAGGAAGATGTTTCTGAAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: WCTQSWKVRCPLAWA*RPSQTGRKMFLKLH Trigger: ATGAAGCTTCAGAAACATCTTCCTGCCCGTCTGACTTGGCCTCAAAGCCCAGGCCAGAGGGCACCTCACCTTCCAGCTTTGAGTACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006397.7 |
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