Pregenerated sensors for EPN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010080Ensembl transcript IDs: ENSMUST00000127305.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCTAGGCTCGGCTTCTAAGCAGCTGCTCTTGCCCCCTCCTGCCTaGAGCAGCCCTGTGGCTGCCTGCCCTCCCTTACAACCAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: LLGSASKQLLLPPPA*SSPVAACPPLQPEQ Trigger: CTGTTCTGGTTGTAAGGGAGGGCAGGCAGCCACAGGGCTGCTGCAGGCAGGAGGGGGCAAGAGCAGCTGCTTAGAAGCCGAGCCTAGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 90 bp | GACTCAAGCTGCCTGCCAGGTCAGACCCTGGGTCCTGAGCGCACGTaGGTAGCCATGGTAACCCTCAAGGCAGAAGTCCAGGTGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: DSSCLPGQTLGPERT*VAMVTLKAEVQVLA Trigger: AGCCAGCACCTGGACTTCTGCCTTGAGGGTTACCATGGCTACCCACGTGCGCTCAGGACCCAGGGTCTGACCTGGCAGGCAGCTTGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 90 bp | AGCCATGGTAACCCTCAAGGCAGAAGTCCAGGTGCTGGCTGTGTTTaGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGACCTCA | + |
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Preference number: 1 (lower is better) Translates to: SHGNPQGRSPGAGCV*FPKPCNNLAEVQTS Trigger: TGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCACCTGGACTTCTGCCTTGAGGGTTACCATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 90 bp | AGGCACCAGGCCAAGAGGAAAGGGGAATGGGGGTTGAGAGGGCTATaGGGACATTCAGATTGTCAAGGAGTTTCTGCCTCAGCAGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: RHQAKRKGEWGLRGL*GHSDCQGVSASAGN Trigger: ATTACCTGCTGAGGCAGAAACTCCTTGACAATCTGAATGTCCTCATAGCCCTCTCAACCCCCATTCCCCTTTCCTCTTGGCCTGGTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 90 bp | TTCCTCCTGGATGAGCCCAGCATTTCATCCAAGACAGTCAGTGTTTaGTGTATTAAACCTGATCCTCCCCAGGGAGCCAGACTGTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: FLLDEPSISSKTVSV*CIKPDPPQGARLSD Trigger: GTCAGACAGTCTGGCTCCCTGGGGAGGATCAGGTTTAATACAGCAAACACTGACTGTCTTGGATGAAATGCTGGGCTCATCCAGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 90 bp | CTGATCCAGCTGCCACACCCCTCAAAAAGTCCACTTGGTAAGAGCTaGGGACGTAGATTCCAGTCTTTATTAGGCGGGTGTAGTCTTCGT | + |
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Preference number: 1 (lower is better) Translates to: LIQLPHPSKSPLGKS*GRRFQSLLGGCSLR Trigger: ACGAAGACTACACCCGCCTAATAAAGACTGGAATCTACGTCCTCAGCTCTTACCAAGTGGACTTTTTGAGGGGTGTGGCAGCTGGATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 90 bp | GCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGGCAGAGTTGAATTTTaGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACTGG | + |
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Preference number: 1 (lower is better) Translates to: ALFSPGERSWGRVEF*MTKSDIREVVSCDW Trigger: CCAGTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCTGCCCCAGCTCCTTTCACCAGGGCTGAAGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 90 bp | GAAAGCTTCTGTTGGCTATTAAATAAGACTAGTAAGAAAGACCTGTaGTACCTCTCTTGGGAAGTTTGGACCTTTAGTTTATTCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ESFCWLLNKTSKKDL*YLSWEVWTFSLFFS Trigger: GGAGAAGAATAAACTAAAGGTCCAAACTTCCCAAGAGAGGTAGCACAGGTCTTTCTTACTAGTCTTATTTAATAGCCAACAGAAGCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 90 bp | CTCATTACTAGGCGATTATCATTAAGTTCAGCCCTGGAGCAGAGTTaGCTAGGCTCGGCTTCTAAGCAGCTGCTCTTGCCCCCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LITRRLSLSSALEQS*LGSASKQLLLPPPA Trigger: GGCAGGAGGGGGCAAGAGCAGCTGCTTAGAAGCCGAGCCTAGCAAACTCTGCTCCAGGGCTGAACTTAATGATAATCGCCTAGTAATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCAGACTGTCTGACTCTGAATCCTAGCCCCACGTCACTCCAGCTTTGTGATATGATTGAGACAGCATaGAAGGGAGGCACCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: EPDCLTLNPSPTSLQLCDMIETA*KGGTRP Trigger: TGGCCTGGTGCCTCCCTTTCATGCTGTCTCAATCAT...ATCACAAAGCTGGAGTGACGTGGGGCTAGGATTCAGAGTCAGACAGTCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTGGTGCTGGCTGTGTTTaGTTTCCTAAGCCCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPGAGCV*FPKPCN Trigger: GTTGCAGGGCTTAGGAAACCAAACACAGCCAGCACC...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACCCTCAAGGCAGAAGTCCAGGTGCTGGCTGTGTTTGGTTTCCTAAGCCCTCTGTGCTACCTCTCTTaGGAAGTTTGGACCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: VTLKAEVQVLAVFGFLSPLCYLS*EVWTFS Trigger: ACTAAAGGTCCAAACTTCCCAAGAGAGGTAGCACAG...AGGGCTTAGGAAACCAAACACAGCCAGCACCTGGACTTCTGCCTTGAGGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACTGGCTGTACAGCCCAGGCTGGCCTTaGACTCAGGATCCTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: FWMTKSDIREVVSCDWLYSPGWP*TQDPLT Trigger: GGTAAGAGGATCCTGAGTTCAAGGCCAGCCTGGGCT...GTACAGCCAGTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTGCATAGCACATCAAAGAGGGTCCACAGATCAGTaGTCAACCTGCACGATCCGC | + |
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Preference number: 2 (lower is better) Translates to: LAIRLGEILCLRCIAHQRGSTDQ*STCTIR Trigger: GCGGATCGTGCAGGTTGAGCACTGATCTGTGGACCC...TCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTTTCTTAACCCAGTTTTaGACAGAGAGTACTGCATAT | + |
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Preference number: 2 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPFLTQF*TESTAY Trigger: ATATGCAGTACTCTCTGTCCAAAACTGGGTTAAGAA...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTAAGGGGAATGGGGGTTaGGAGGGCTATGAGGACATT | + |
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Preference number: 2 (lower is better) Translates to: TMFINSVLKFLTQFWTESKGNGG*EGYEDI Trigger: AATGTCCTCATAGCCCTCTCAACCCCCATTCCCCTT...ACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTGCATAGCACATCAAAGAGGACTAATGCCTGAATaGTTGAGACAGCATGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LAIRLGEILCLRCIAHQRGLMPE*LRQHER Trigger: CCTTTCATGCTGTCTCAATCATTCAGGCATTAGTCC...TCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 90 bp | GTGCTGGGATTACTCGTATGTGTCACCATGTTTATCAACTCTGTTTaGAAATTCTTAACCCAGTTTTGGACAGAGAGTACTGCATATCCA | + |
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Preference number: 2 (lower is better) Translates to: VLGLLVCVTMFINSV*KFLTQFWTESTAYP Trigger: TGGATATGCAGTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGTGACACATACGAGTAATCCCAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTGAATTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACGTCACTCCAGCTTTGTaGTTTAGAACATGTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: RVEFWMTKSDIREVVSCDVTPAL*FRTCHC Trigger: ACAGTGACATGTTCTAAATCACAAAGCTGGAGTGAC...GTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTGAATTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACAAGACAGTCAGTGTTTaGTGTATTAAACCTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: RVEFWMTKSDIREVVSCDKTVSV*CIKPDP Trigger: AGGATCAGGTTTAATACAGCAAACACTGACTGTCTT...GTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 72 bp | TGCCTGCCAGGTCAGACCCTGGGTCCTGAGCGCACGTaGGTAGCCATGGTAACCCTCAAGGCAGAAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CLPGQTLGPERT*VAMVTLKAEVQ Trigger: CTGGACTTCTGCCTTGAGGGTTACCATGGCTACCCACGTGCGCTCAGGACCCAGGGTCTGACCTGGCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 72 bp | TGGTGCTTCAGGCTGAGGAAGTCCACGTGCTCTCGGTaGCCCCCAAAGAGAACAAAGCCAGACTCAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: WCFRLRKSTCSR*PPKRTKPDSSC Trigger: GCAGCTTGAGTCTGGCTTTGTTCTCTTTGGGGGTCACCGAGAGCACGTGGACTTCCTCAGCCTGAAGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 72 bp | CTGGCTTGTCGACTACCTTTCTGTCCTCCTAGCTCCTaGAAGATGGGGGTTCAGCCATCCTGGGTTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LACRLPFCPPSS*KMGVQPSWVPP Trigger: AGGAGGAACCCAGGATGGCTGAACCCCCATCTTCCAGGAGCTAGGAGGACAGAAAGGTAGTCGACAAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGCAACAACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTAAGCCCAGGCTGGCCTaGAACTCAGGATCCTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PCNNLAEVQTSDSQGGSLKPRLA*NSGSSY Trigger: GTAAGAGGATCCTGAGTTCAAGGCCAGCCTGGGCTT...AAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGGCAGACCTCAAAAAGTCCACTaGGTAAGAGCTGAGGACGTA | + |
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Preference number: 3 (lower is better) Translates to: PQIVKVALFSPGERSWGRPQKVH*VRAEDV Trigger: TACGTCCTCAGCTCTTACCAAGTGGACTTTTTGAGG...TCTGCCCCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 72 bp | GCCAAGAGGAAAGGGGAATGGGGGTTGAGAGGGCTATaGGGACATTCAGATTGTCAAGGAGTTTCTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: AKRKGEWGLRGL*GHSDCQGVSAS Trigger: TGAGGCAGAAACTCCTTGACAATCTGAATGTCCTCATAGCCCTCTCAACCCCCATTCCCCTTTCCTCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 72 bp | CTGCCACACCCCTCAAAAAGTCCACTTGGTAAGAGCTaGGGACGTAGATTCCAGTCTTTATTAGGCGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: LPHPSKSPLGKS*GRRFQSLLGGC Trigger: ACACCCGCCTAATAAAGACTGGAATCTACGTCCTCAGCTCTTACCAAGTGGACTTTTTGAGGGGTGTGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 72 bp | GATGAGCCCAGCATTTCATCCAAGACAGTCAGTGTTTaGTGTATTAAACCTGATCCTCCCCAGGGAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: DEPSISSKTVSV*CIKPDPPQGAR Trigger: TCTGGCTCCCTGGGGAGGATCAGGTTTAATACAGCAAACACTGACTGTCTTGGATGAAATGCTGGGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 72 bp | AGCCCTGGTGAAAGGAGCTGGGGCAGAGTTGAATTTTaGATGACCAAGTCAGACATAAGAGAAGTTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SPGERSWGRVEF*MTKSDIREVVS Trigger: GGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCTGCCCCAGCTCCTTTCACCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 72 bp | GATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTaGCTGGCTGTACTGCAGCTATATCCAGTGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: DDQVRHKRSCFL*LAVLQLYPVLL Trigger: CAGTAGCACTGGATATAGCTGCAGTACAGCCAGTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 72 bp | TTGAACTCAGGATCCTCTTACCTCCACCCCCTTAAGTaGTGGGATTACTCGTATGTGTCACCATGTTTATCA | + |
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Preference number: 3 (lower is better) Translates to: LNSGSSYLHPLK*WDYSYVSPCLS Trigger: TGATAAACATGGTGACACATACGAGTAATCCCAGCACTTAAGGGGGTGGAGGTAAGAGGATCCTGAGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CCA 72 bp | ACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACTaGCTGTACTGCAGCTATATCCAGTGCTACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: TKSDIREVVSCD*LYCSYIQCYWL Trigger: AAGCCAGTAGCACTGGATATAGCTGCAGTACAGCCAGTCACAGGAAACAACTTCTCTTATGTCTGACTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 72 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTaGATAGCACATCAAAGAATGAGCAAATGCTGTCGC | + |
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Preference number: 3 (lower is better) Translates to: LAIRLGEILCLR*IAHQRMSKCCR Trigger: GCGACAGCATTTGCTCATTCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTGCATAGCACATCAAAGAATGAGGACATTCAGATaGTCAAGGAGTTTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LAIRLGEILCLRCIAHQRMRTFR*SRSFCL Trigger: GAGGCAGAAACTCCTTGACAATCTGAATGTCCTCAT...TCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR TCA 72 bp | ATAATAATAATAATAATGTTAAGCCCAGGCTGGCCTTaGACTCAGGATCCTCTTACCTCCACCCCCTTAAGT | + |
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Preference number: 3 (lower is better) Translates to: IIIIIMLSPGWP*TQDPLTSTPLS Trigger: ACTTAAGGGGGTGGAGGTAAGAGGATCCTGAGTTCAAGGCCAGCCTGGGCTTAACATTATTATTATTATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR GCA 72 bp | TTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACTaGATATCCAGCTTAGGTAGGGCCTTACAAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: FEILNPVLDREY*ISSLGRALQTL Trigger: CAGAGTTTGTAAGGCCCTACCTAAGCTGGATATGCAGTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCCTGTGGCTGCCTGCCCTCCCTTACAACCAGAACAGCTCCTGCCCATGTAGGGTCGGCCTGCCCTaGTCGCCCGCGCCAAACGGG | + |
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Preference number: 4 (lower is better) Translates to: AALWLPALPYNQNSSCPCRVGLP*SPAPNG Trigger: CCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCT...ACATGGGCAGGAGCTGTTCTGGTTGTAAGGGAGGGCAGGCAGCCACAGGGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTCCTGAGCGCACGTGGGTAGCCATGGTAACCCTCAAGGCAGAAGTCCAGCTTGCGGGAAGACGCTaGCCGAGGCGGGGAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LGPERTWVAMVTLKAEVQLAGRR*PRRGGS Trigger: CGACCCTCCCCGCCTCGGTCAGCGTCTTCCCGCAAG...CTGGACTTCTGCCTTGAGGGTTACCATGGCTACCCACGTGCGCTCAGGACCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCCTGTGGCTGCCTGCCCTCCCTTACAACCAGAACAGCTCCTGCCCATGTCAGCAGAGCAGTGTGTaGAAGGCAGGGCCGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AALWLPALPYNQNSSCPCQQSSV*KAGPGQ Trigger: CTGCCCCGGCCCTGCCTTCCACACACTGCTCTGCTG...ACATGGGCAGGAGCTGTTCTGGTTGTAAGGGAGGGCAGGCAGCCACAGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | TCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGTGGGCAGCAGTGGCTaGGGCAAGCTCGCCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SRPQIVKVALFSPGERSWVGSSG*GKLAGG Trigger: GCCGCCGGCGAGCTTGCCTCAGCCACTGCTGCCCAC...CCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | GAGCCAGACTGTCTGACTCTGAATCCTAGCCCCACGTCACTCCAGCTTTGTGATCTACCGGCACGCTGCTaGGCGGAAGGGGCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EPDCLTLNPSPTSLQLCDLPARC*AEGAER Trigger: CCTCTCTGCCCCTTCCGCTCAGCAGCGTGCCGGTAG...ATCACAAAGCTGGAGTGACGTGGGGCTAGGATTCAGAGTCAGACAGTCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGAGGACGTGGGCAGCAGTaGCTGAGGCAAGCTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VLAVFGFLSPATTLQRSRGRGQQ*LRQARR Trigger: CCGGCGAGCTTGCCTCAGCCACTGCTGCCCACGTCC...TCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | AACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGCCATTGGGCCGGACGTaGGCAGCAGTGGCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: NLAEVQTSDSQGGSLQPWPLGRT*AAVAEA Trigger: TGCCTCAGCCACTGCTGCCCACGTCCGGCCCAATGG...CCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | AACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGGCATGGGTTCGCTCTTaGCGCAGGCGCTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: NLAEVQTSDSQGGSLQPWAWVRS*RRRSSS Trigger: GGATGAGGAGCGCCTGCGGCAAGAGCGAACCCATGC...CCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | AACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGGGGATTCCGGGTCCTTaGAGCCAGGGGTGCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: NLAEVQTSDSQGGSLQPWGIPGP*SQGCLD Trigger: GTCAAGGCACCCCTGGCTGCAAGGACCCGGAATCCC...CCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTGGTTTAGGGTCGGCCTaGCCTGATCGCCCGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPGLGSA*PDRPRQ Trigger: TTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACC...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGAGCGGGTAGGGGAGCTTaGTGCCCAGGGGTCTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: VLAVFGFLSPATTLQRSRAGRGA*CPGVCD Trigger: ATCGCAGACCCCTGGGCACCAAGCTCCCCTACCCGC...TCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CTATATCCAGTGCTACTGGCTTGTCGACTACCTTTCTGTCCTCCTAGCTCCTGGTGGGGGACTTCCCCGTaGGCAGGGCCTGGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: LYPVLLACRLPFCPPSSWWGTSP*AGPGHC Trigger: ACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCCCA...CCAGGAGCTAGGAGGACAGAAAGGTAGTCGACAAGCCAGTAGCACTGGATATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | CTATATCCAGTGCTACTGGCTTGTCGACTACCTTTCTGTCCTCCTAGCTCCTGGGGTAGGGGAGCTTGGTaGCCAGGGGTCTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYPVLLACRLPFCPPSSWGRGAW*PGVCDG Trigger: CCCATCGCAGACCCCTGGGCACCAAGCTCCCCTACC...CCAGGAGCTAGGAGGACAGAAAGGTAGTCGACAAGCCAGTAGCACTGGATATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | AACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTCTTACCGCTGTCATTaGGCCTCCGCCACACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NLAEVQTSDSQGGSLQPWSYRCH*ASATPS Trigger: GGATGGTGTGGCGGAGGCTCAATGACAGCGGTAAGA...CCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | TCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGCGCTGCCAATACCCATaGCTTCCAGGGCCATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRPQIVKVALFSPGERSWRCQYP*LPGPFA Trigger: AGCGAATGGCCCTGGAAGGCATGGGTATTGGCAGCG...CCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GTAACCCTCAAGGCAGAAGTCCAGGTGCTGGCTGTGTTTGGTTTCCTAAGCCCTCCTCTTCGCGACTCATaGCCAAGGCCAGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTLKAEVQVLAVFGFLSPPLRDS*PRPAAA Trigger: AGCTGCAGCTGGCCTTGGCCATGAGTCGCGAAGAGG...AGGGCTTAGGAAACCAAACACAGCCAGCACCTGGACTTCTGCCTTGAGGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GTAACCCTCAAGGCAGAAGTCCAGGTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGTTCGGCCTGAGACCTaGGATGTCCCATGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLKAEVQVLAVFGFLSPVRPET*DVPWVS Trigger: GCTGACCCATGGGACATCCCAGGTCTCAGGCCGAAC...AGGGCTTAGGAAACCAAACACAGCCAGCACCTGGACTTCTGCCTTGAGGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGGCAGAGTTCTGAGCCCGTCTTaGGCAGGTAGTCCAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQIVKVALFSPGERSWGRVLSPS*AGSPIV Trigger: CACTATTGGACTACCTGCTCAAGACGGGCTCAGAAC...TCTGCCCCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | TTACAACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCTCTTCTCCAGAAGTCTaGGGCCGCGCCTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPEQLLPMFLRRTVTMGSSPEV*GRACSR Trigger: CCTGGAGCAGGCGCGGCCTCAGACTTCTGGAGAAGA...GCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGTTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | GAGCCAGACTGTCTGACTCTGAATCCTAGCCCCACGTCACTCCAGCTTTGTGATTGGAGACCAGGGGTCTaGAGAAGGTCCCCAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPDCLTLNPSPTSLQLCDWRPGV*RRSPRG Trigger: TCCTCTTGGGGACCTTCTGCAGACCCCTGGTCTCCA...ATCACAAAGCTGGAGTGACGTGGGGCTAGGATTCAGAGTCAGACAGTCTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | AACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLAEVQTSDSQGGSLQPWTWDVP*VSRAVC Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...CCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | GTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGACCAAGAGGAGCCACTTaGCTCTGTGTTCGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLAVFGFLSPATTLQRSRPRGAT*LCVRPE Trigger: CTCAGGCCGAACACAGAGCCAAGTGGCTCCTCTTGG...TCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGGCAGATTCGCTCTTTGGTCTTaGGAGCATGGGTTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIVKVALFSPGERSWGRFALWS*EHGFAL Trigger: AAGAGCGAACCCATGCTCTCAAGACCAAAGAGCGAA...TCTGCCCCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | TCCAGACCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGACAATGTTCTTCACCTaGCGGCGGAGTGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRPQIVKVALFSPGERSWTMFFT*RRSAEV Trigger: AACCTCTGCACTCCGCCGCCAGGTGAAGAACATTGT...CCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGGTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTTTGGTCTTGAGAGCATaGGTTCGCTCTTGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPLVLRA*VRSCRR Trigger: CCTGCGGCAAGAGCGAACCCATGCTCTCAAGACCAA...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGACAGGTCAGCAATCTCTaGCATGAGAGAACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLAVFGFLSPATTLQRSRQVSNL*HERTGW Trigger: CCACCCAGTTCTCTCATGTCAGAGATTGCTGACCTG...TCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | CCCTGCAACAACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTAAGGCCAGCTGCAGCTaGAGCTCTTCTTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCNNLAEVQTSDSQGGSLKASCS*SSSSPE Trigger: TTCTGGAGAAGAAGAGCTGCAGCTGCAGCTGGCCTT...AAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTTCCTTCATGCCATTCTaGTTGCAACTGGGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPSFMPF*LQLGLE Trigger: CTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGA...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CCCTGCAACAACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTAGCAAATCCCAAGGCTaGCTTCGGGACAGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PCNNLAEVQTSDSQGGSLSKSQG*LRDRAF Trigger: AAATGCCCTGTCCCGAAGCCAGCCTTGGGATTTGCT...AAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 72 bp | CTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTaGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVFGFLSPATT*QRSRPQIVKVA Trigger: AGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 72 bp | AGGCGATTATCATTAAGTTCAGCCCTGGAGCAGAGTTaGCTAGGCTCGGCTTCTAAGCAGCTGCTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLSSALEQS*LGSASKQLLLP Trigger: GGGCAAGAGCAGCTGCTTAGAAGCCGAGCCTAGCAAACTCTGCTCCAGGGCTGAACTTAATGATAATCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CTATATCCAGTGCTACTGGCTTGTCGACTACCTTTCTGTCCTCCTAGCTCCTGGTGGATTCTAGAGGTTTaGCAAATGGGTCGAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LYPVLLACRLPFCPPSSWWILEV*QMGRRA Trigger: CGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCA...CCAGGAGCTAGGAGGACAGAAAGGTAGTCGACAAGCCAGTAGCACTGGATATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CCCTGCAACAACCTTGCAGAGGTCCAGACCTCAGATAGTCAAGGTGGCTCTCTTTCTCCTTGGGTTCTGTaGATTCTAGAGGTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCNNLAEVQTSDSQGGSLSPWVL*ILEVWQ Trigger: TTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGA...AAGAGAGCCACCTTGACTATCTGAGGTCTGGACCTCTGCAAGGTTGTTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | ACCATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTCGCCTGCTCCAGGTCTaGGGCATAGCGCGGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TMFINSVLKFLTQFWTESRLLQV*GIARGR Trigger: TCGTCCCCGCGCTATGCCTCAGACCTGGAGCAGGCG...ACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTGAATTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACCAGGGCCGGGGCAGGTaGGAAGATGTCAGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVEFWMTKSDIREVVSCDQGRGR*EDVSQV Trigger: GACTTGGCTGACATCTTCGCACCTGCCCCGGCCCTG...GTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | AGAGTTGAATTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACGAGCCGGTACGCATCTaGTTTAGGGTCGGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVEFWMTKSDIREVVSCDEPVRI*FRVGLP Trigger: GGGCAGGCCGACCCTAAACCAGATGCGTACCGGCTC...GTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACATCCCTGTGGGAGGCTaGGGGGACTGGCCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVYQLCFEILNPVLDREYIPVGG*GDWPFS Trigger: GCTGAAAGGCCAGTCCCCCCAGCCTCCCACAGGGAT...GTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | ACCATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTCCCAGGGGTCTGCGATaGGGGGTCCAGAAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TMFINSVLKFLTQFWTESPRGLR*GVQKVA Trigger: TGCTACCTTCTGGACCCCCCATCGCAGACCCCTGGG...ACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | TTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACTGGCTGTACCTAGTGAGTCCAAGTTaGCCAAAGAAGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FWMTKSDIREVVSCDWLYLVSPS*PKKRQR Trigger: CCTCTGCCTCTTCTTTGGTCAACTTGGACTCACTAG...GTACAGCCAGTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR GCA 90 bp | CATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACAGCCCAGCTGCCCGCTaGCAATACCCATGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVYQLCFEILNPVLDREYSPAAR*QYPCLP Trigger: TGGAAGGCATGGGTATTGGCAGCGGGCAGCTGGGCT...GTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR TCA 90 bp | ACCATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTCAGCAATCTCTGACATaGGAGAACTGGGTGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TMFINSVLKFLTQFWTESQQSLT*ENWVGP Trigger: GGGGCCCACCCAGTTCTCTCATGTCAGAGATTGCTG...ACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CCA 90 bp | CATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACATTTCCAGAGGGAACTaGAGACCAGGGGTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVYQLCFEILNPVLDREYISRGN*RPGVCR Trigger: TCTGCAGACCCCTGGTCTCCAGTTCCCTCTGGAAAT...GTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 72 bp | AATAATAATAATAATAATGTTAAGCCCAGGCTGGCCTaGAACTCAGGATCCTCTTACCTCCACCCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNVKPRLA*NSGSSYLHPLK Trigger: CTTAAGGGGGTGGAGGTAAGAGGATCCTGAGTTCAAGGCCAGCCTGGGCTTAACATTATTATTATTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 72 bp | GTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTaGGACAGAGAGTACTGCATATCCAGCTTAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYQLCFEILNPV*DREYCISSLGR Trigger: CCTACCTAAGCTGGATATGCAGTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| 3UTR CAA 72 bp | TTACTCGTATGTGTCACCATGTTTATCAACTCTGTTTaGAAATTCTTAACCCAGTTTTGGACAGAGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLVCVTMFINSV*KFLTQFWTEST Trigger: AGTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATGGTGACACATACGAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | TCAGAGGAAGGGATTAGTGCCAGCCTGCGGGGGCAGCGGCCCCATTaGGCCGGACGTGGGCAGCAGTGGCTGAGGCAAGCTCGCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SEEGISASLRGQRPH*AGRGQQWLRQARRR Trigger: CCGCCGGCGAGCTTGCCTCAGCCACTGCTGCCCACGTCCGGCCCAATGGGGCCGCTGCCCCCGCAGGCTGGCACTAATCCCTTCCTCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | GGCCCAGAGCAGGGGAGCCGGTACGCATCTGGTTTAGGGTCGGCCTaGCCTGATCGCCCGCGCCAAACGGGTTGGTTGGGGACGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GPEQGSRYASGLGSA*PDRPRQTGWLGTEH Trigger: GTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACCAGATGCGTACCGGCTCCCCTGCTCTGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS TCA 90 bp | AGAGCAGGGGAGCCGGTACGCATCTGGTTTAGGGTCGGCCTGCCCTaGTCGCCCGCGCCAAACGGGTTGGTTGGGGACGGAACACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGEPVRIWFRVGLP*SPAPNGLVGDGTPR Trigger: TCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACCAGATGCGTACCGGCTCCCCTGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | AAGGACTCCGGAGTCCGGCAGGGGCGCGCTTCCTTTCCTGGCTGCTaGGGTAGCGCCTCTCCTAGCACACCCAGGTCAAGGGCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDSGVRQGRASFPGC*GSASPSTPRSRASG Trigger: ACCTGAAGCCCTTGACCTGGGTGTGCTAGGAGAGGCGCTACCGCAGCAGCCAGGAAAGGAAGCGCGCCCCTGCCGGACTCCGGAGTCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | AGGAAGGACTCCGGAGTCCGGCAGGGGCGCGCTTCCTTTCCTGGCTaGTGCGGTAGCGCCTCTCCTAGCACACCCAGGTCAAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKDSGVRQGRASFPG*CGSASPSTPRSRAS Trigger: TGAAGCCCTTGACCTGGGTGTGCTAGGAGAGGCGCTACCGCAGCAGCCAGGAAAGGAAGCGCGCCCCTGCCGGACTCCGGAGTCCTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | GGGTCTAGCTCCACAGTGCTGGGGGACTTCCCCGTGGGCAGGGCCTaGGCACTGTCCCGGCTCTCCTTGGGTTCTGTGGATTCTAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSSTVLGDFPVGRA*ALSRLSLGSVDSRG Trigger: ACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCCCAGCACTGTGGAGCTAGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | AGTCTCCAAATGGGTCTAGCTCCACAGTGCTGGGGGACTTCCCCGTaGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTTGGGTTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQMGLAPQCWGTSP*AGPGHCPGSPWVLW Trigger: CCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCCCAGCACTGTGGAGCTAGACCCATTTGGAGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | TCTGGTTTAGGGTCGGCCTGCCCTGATCGCCCGCGCCAAACGGGTTaGTTGGGGACGGAACACCCAGACCTGTCAGGAAGGGATTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLGSACPDRPRQTG*LGTEHPDLSGRDSG Trigger: CCCGGAATCCCTTCCTGACAGGTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | GGGACGAAGATGCGGACGTGTAAGAAGAGGGGGAGCCCCGAGATCTaGGGCTGTAGCCCAGCTGCCCGCTGCCAATACCCATGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTKMRTCKKRGSPEI*GCSPAARCQYPCLP Trigger: TGGAAGGCATGGGTATTGGCAGCGGGCAGCTGGGCTACAGCCGCAGATCTCGGGGCTCCCCCTCTTCTTACACGTCCGCATCTTCGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 90 bp | CCGTGGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTTGGGTTCTGTaGATTCTAGAGGTTTGGCAAATGGGTCGAAGGGCGAGGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PWAGPGHCPGSPWVL*ILEVWQMGRRARHH Trigger: GTGGTGCCTCGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 90 bp | GGGACTTCCCCGTGGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTTaGGTTCTGTGGATTCTAGAGGTTTGGCAAATGGGTCGAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSPWAGPGHCPGSP*VLWILEVWQMGRRA Trigger: CGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS TCA 90 bp | CAGCTCTTCTTCTCCAGAAGTCTGAGGCCGCGCCTGCTCCAGGTCTaGGGCATAGCGCGGGGACGAAGATGCGGACGTGTAAGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLFFSRSLRPRLLQV*GIARGRRCGRVRRG Trigger: CCCTCTTCTTACACGTCCGCATCTTCGTCCCCGCGCTATGCCTCAGACCTGGAGCAGGCGCGGCCTCAGACTTCTGGAGAAGAAGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | AACTGGAGACCAGGGGTCTGCAGAAGGTCCCCAAGAGGAGCCACTTaGCTCTGTGTTCGGCCTGAGACCTGGGATGTCCCATGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NWRPGVCRRSPRGAT*LCVRPETWDVPWVS Trigger: GCTGACCCATGGGACATCCCAGGTCTCAGGCCGAACACAGAGCCAAGTGGCTCCTCTTGGGGACCTTCTGCAGACCCCTGGTCTCCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | CAAATCCCAAGGCTGGCTTCGGGACAGGGCATTTCCAGAGGGAACTaGAGACCAGGGGTCTGCAGAAGGTCCCCAAGAGGAGCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QIPRLASGQGISRGN*RPGVCRRSPRGATW Trigger: CCAAGTGGCTCCTCTTGGGGACCTTCTGCAGACCCCTGGTCTCCAGTTCCCTCTGGAAATGCCCTGTCCCGAAGCCAGCCTTGGGATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGATAGTCAAGGTGGCTCTCTTCAGCCCTGGTGAAAGGAGCTGGGGCAGACCCCTTCTCATGCTCTaGCCGGCTCAGGCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQIVKVALFSPGERSWGRPLLML*PAQAQS Trigger: GCTCTGAGCCTGAGCCGGCAAGAGCATGAGAAGGGG...TCTGCCCCAGCTCCTTTCACCAGGGCTGAAGAGAGCCACCTTGACTATCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | CCATGGGTCAGCAGAGCAGTGTGTGGAAGGCAGGGCCGGGGCAGGTaGGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGACTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PWVSRAVCGRQGRGR*EDVSQVQDGGLTSF Trigger: AAAACTAGTCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGCACCTGCCCCGGCCCTGCCTTCCACACACTGCTCTGCTGACCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 90 bp | GGGCACTGTCCCGGCTCTCCTTGGGTTCTGTGGATTCTAGAGGTTTaGCAAATGGGTCGAAGGGCGAGGCACCACCTAGAGCAGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHCPGSPWVLWILEV*QMGRRARHHLEQRC Trigger: ACACCTCTGCTCTAGGTGGTGCCTCGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCCTGAGCGCACGTGGGTAGCCATGGTAACCCTCAAGGCAGAAGTCCAGGTGGATTCTAGAGGTTaGGCAAATGGGTCGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPERTWVAMVTLKAEVQVDSRG*ANGSKG Trigger: GCCCTTCGACCCATTTGCCAAACCTCTAGAATCCAC...CTGGACTTCTGCCTTGAGGGTTACCATGGCTACCCACGTGCGCTCAGGACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCCACCTCGCCAAACGGGTTGGTaGGGGACGGAACACCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRTAPAHVPKKDSDNGPPRQTGW*GTEHPD Trigger: GTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCG...AGGTGGCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 90 bp | GCACACCCAGGTCAAGGGCTTCAGGTTCCTTCATGCCATTCTGCTTaGAACTGGGGCTGGAGTCTCCAAATGGGTCTAGCTCCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHPGQGLQVPSCHSA*NWGWSLQMGLAPQC Trigger: GCACTGTGGAGCTAGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS GCA 90 bp | GCGCCTCTCCTAGCACACCCAGGTCAAGGGCTTCAGGTTCCTTCATaGCATTCTGCTTGCAACTGGGGCTGGAGTCTCCAAATGGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: APLLAHPGQGLQVPS*HSACNWGWSLQMGL Trigger: TAGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGGTGTGCTAGGAGAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCTGTGGCTGCCTGCCCTCCCTTACAACCAGAACAGCTCCTGCCCATGTACTAGTGAGTCCAAGTaGACCAAAGAAGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AALWLPALPYNQNSSCPCTSESK*TKEEAE Trigger: CTCTGCCTCTTCTTTGGTCAACTTGGACTCACTAGT...ACATGGGCAGGAGCTGTTCTGGTTGTAAGGGAGGGCAGGCAGCCACAGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS GCA 90 bp | CCTAGCACACCCAGGTCAAGGGCTTCAGGTTCCTTCATGCCATTCTaGTTGCAACTGGGGCTGGAGTCTCCAAATGGGTCTAGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PSTPRSRASGSFMPF*LQLGLESPNGSSST Trigger: TGTGGAGCTAGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGGTGTGCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CAA 90 bp | TTACAACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCAGCATGGGTTCGCTCTaGCCGCAGGCGCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LQPEQLLPMFLRRTVTMGSMGSL*PQALLI Trigger: GATGAGGAGCGCCTGCGGCAAGAGCGAACCCATGCT...GCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGTTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTGCATAGCACATCAAAGAGGGGCAGCGGCCCCATaGGGCCGGACGTGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAIRLGEILCLRCIAHQRGAAAP*GRTWAA Trigger: TGCTGCCCACGTCCGGCCCAATGGGGCCGCTGCCCC...TCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGACTGTCTGACTCTGAATCCTAGCCCCACGTCACTCCAGCTTTGTGATCTGTCCCGGCTCTCCTaGGGTTCTGTGGATTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPDCLTLNPSPTSLQLCDLSRLS*GSVDSR Trigger: TCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAG...ATCACAAAGCTGGAGTGACGTGGGGCTAGGATTCAGAGTCAGACAGTCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGCTGTGTTTGGTTTCCTAAGCCCTGCAACAACCTTGCAGAGGTCCAGAAGGGCCATTCGCTCTTaGGTCTTGAGAGCATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLAVFGFLSPATTLQRSRRAIRS*VLRAWV Trigger: AACCCATGCTCTCAAGACCAAAGAGCGAATGGCCCT...TCTGGACCTCTGCAAGGTTGTTGCAGGGCTTAGGAAACCAAACACAGCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CAA 90 bp | TTACAACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCGCAAAGGCCACCGTGTaGAAGGTCAGGTCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LQPEQLLPMFLRRTVTMGAKATV*KVRSAI Trigger: GATTGCTGACCTGACCTTCAACACGGTGGCCTTTGC...GCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGTTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CAA 90 bp | TTACAACCAGAACAGCTCCTGCCCATGTTCCTAAGAAGGACAGTGACAATGGGCTTCATGCCATTCTGCTaGCAACTGGGGCTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQPEQLLPMFLRRTVTMGFMPFC*QLGLES Trigger: AGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAA...GCCCATTGTCACTGTCCTTCTTAGGAACATGGGCAGGAGCTGTTCTGGTTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCAATACGATTAGGTGAAATTCTCTGCCTAAGGTGCATAGCACATCAAAGAAGGCGCTCCTCATCCTaGAGAAGGGCCATCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAIRLGEILCLRCIAHQRRRSSS*RRAITC Trigger: ACAGGTGATGGCCCTTCTCAAGGATGAGGAGCGCCT...TCTTTGATGTGCTATGCACCTTAGGCAGAGAATTTCACCTAATCGTATTGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CAA 90 bp | CATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACCCAGTGCTGGGGAGTTaGCGGGTAGGGGAGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HVYQLCFEILNPVLDREYPVLGS*RVGELG Trigger: ACCAAGCTCCCCTACCCGCAAACTCCCCAGCACTGG...GTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGAATTTTGGATGACCAAGTCAGACATAAGAGAAGTTGTTTCCTGTGACATTCGCTCTTTGGTCTaGAGAGCATGGGTTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVEFWMTKSDIREVVSCDIRSLV*RAWVRS Trigger: AGAGCGAACCCATGCTCTCAAGACCAAAGAGCGAAT...GTCACAGGAAACAACTTCTCTTATGTCTGACTTGGTCATCCAAAATTCAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS-3UTR CAA 90 bp | CATGTTTATCAACTCTGTTTTGAAATTCTTAACCCAGTTTTGGACAGAGAGTACAGGGCCATCACCTGTTaGACCTTCTCACGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: HVYQLCFEILNPVLDREYRAITC*TFSRTL Trigger: CAATGTTCGTGAGAAGGTCAAACAGGTGATGGCCCT...GTACTCTCTGTCCAAAACTGGGTTAAGAATTTCAAAACAGAGTTGATAAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 72 bp | GGGCAGCGGCCCCATTGGGCCGGACGTGGGCAGCAGTaGCTGAGGCAAGCTCGCCGGCGGCGGGGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQRPHWAGRGQQ*LRQARRRRGEG Trigger: GCCTTCGCCCCGCCGCCGGCGAGCTTGCCTCAGCCACTGCTGCCCACGTCCGGCCCAATGGGGCCGCTGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | GGAGTCCGGCAGGGGCGCGCTTCCTTTCCTGGCTGCTaGGGTAGCGCCTCTCCTAGCACACCCAGGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVRQGRASFPGC*GSASPSTPRSR Trigger: CCTTGACCTGGGTGTGCTAGGAGAGGCGCTACCGCAGCAGCCAGGAAAGGAAGCGCGCCCCTGCCGGACTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | TCCGGAGTCCGGCAGGGGCGCGCTTCCTTTCCTGGCTaGTGCGGTAGCGCCTCTCCTAGCACACCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGVRQGRASFPG*CGSASPSTPRS Trigger: TGACCTGGGTGTGCTAGGAGAGGCGCTACCGCAGCAGCCAGGAAAGGAAGCGCGCCCCTGCCGGACTCCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | CAGGGGAGCCGGTACGCATCTGGTTTAGGGTCGGCCTaGCCTGATCGCCCGCGCCAAACGGGTTGGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSRYASGLGSA*PDRPRQTGWLG Trigger: CCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACCAGATGCGTACCGGCTCCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | GGGTCGGCCTGCCCTGATCGCCCGCGCCAAACGGGTTaGTTGGGGACGGAACACCCAGACCTGTCAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSACPDRPRQTG*LGTEHPDLSGR Trigger: CCTTCCTGACAGGTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS TCA 72 bp | GAGCCGGTACGCATCTGGTTTAGGGTCGGCCTGCCCTaGTCGCCCGCGCCAAACGGGTTGGTTGGGGACGGA | + |
|
Preference number: 6 (lower is better) Translates to: EPVRIWFRVGLP*SPAPNGLVGDG Trigger: TCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACCAGATGCGTACCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | TCCACAGTGCTGGGGGACTTCCCCGTGGGCAGGGCCTaGGCACTGTCCCGGCTCTCCTTGGGTTCTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: STVLGDFPVGRA*ALSRLSLGSVD Trigger: ATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCCCAGCACTGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 90 bp | GGTTTAGGGTCGGCCTGCCCTGATCGCCCGCGCCAAACGGGTTGGTaGGGGACGGAACACCCAGACCTGTCAGGAAGGGATTCCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLGSACPDRPRQTGW*GTEHPDLSGRDSGS Trigger: GGACCCGGAATCCCTTCCTGACAGGTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGACCCTAAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | GGCTGGAGTCTCCAAATGGGTCTAGCTCCACAGTGCTaGGGGACTTCCCCGTGGGCAGGGCCTGGGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GWSLQMGLAPQC*GTSPWAGPGHC Trigger: ACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCCCAGCACTGTGGAGCTAGACCCATTTGGAGACTCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | CGGCCTGCCCTGATCGCCCGCGCCAAACGGGTTGGTTaGGGACGGAACACCCAGACCTGTCAGGAAGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RPALIARAKRVG*GRNTQTCQEGI Trigger: AATCCCTTCCTGACAGGTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 72 bp | TCGGCCTGCCCTGATCGCCCGCGCCAAACGGGTTGGTaGGGGACGGAACACCCAGACCTGTCAGGAAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SACPDRPRQTGW*GTEHPDLSGRD Trigger: ATCCCTTCCTGACAGGTCTGGGTGTTCCGTCCCCAACCAACCCGTTTGGCGCGGGCGATCAGGGCAGGCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | AGCCCCGAGATCTGCGGCTGTAGCCCAGCTGCCCGCTaGCAATACCCATGCCTTCCAGGGCCATTCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPEICGCSPAAR*QYPCLPGPFAL Trigger: AAGAGCGAATGGCCCTGGAAGGCATGGGTATTGGCAGCGGGCAGCTGGGCTACAGCCGCAGATCTCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | GACCTGGGATGTCCCATGGGTCAGCAGAGCAGTGTGTaGAAGGCAGGGCCGGGGCAGGTGCGAAGATGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLGCPMGQQSSV*KAGPGQVRRCQ Trigger: CTGACATCTTCGCACCTGCCCCGGCCCTGCCTTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | TGGCTCTGTGTTCGGCCTGAGACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGTGGAAGGCAGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WLCVRPETWDVP*VSRAVCGRQGR Trigger: CCGGCCCTGCCTTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGGTCTCAGGCCGAACACAGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 90 bp | GGGGACTTCCCCGTGGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTaGGGTTCTGTGGATTCTAGAGGTTTGGCAAATGGGTCGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GDFPVGRAWALSRLS*GSVDSRGLANGSKG Trigger: GCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGGGAAGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS TCA 72 bp | TTCTCCAGAAGTCTGAGGCCGCGCCTGCTCCAGGTCTaGGGCATAGCGCGGGGACGAAGATGCGGACGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSRSLRPRLLQV*GIARGRRCGRV Trigger: TACACGTCCGCATCTTCGTCCCCGCGCTATGCCTCAGACCTGGAGCAGGCGCGGCCTCAGACTTCTGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 72 bp | CTCTTCTCTCTCAGGCTCCCTGTCCCGTTGACGACGTaGGCCAGCAGGTTCTGCGCCGTTGGCCACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFSLRLPVPLTT*ASRFCAVGHWR Trigger: TCTCCAGTGGCCAACGGCGCAGAACCTGCTGGCCAACGTCGTCAACGGGACAGGGAGCCTGAGAGAGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 72 bp | CCCGTGGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTaGGGTTCTGTGGATTCTAGAGGTTTGGCAAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVGRAWALSRLS*GSVDSRGLANG Trigger: CCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 90 bp | AGCTGCCCGCTGCCAATACCCATGCCTTCCAGGGCCATTCGCTCTTaGGTCTTGAGAGCATGGGTTCGCTCTTGCCGCAGGCGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCPLPIPMPSRAIRS*VLRAWVRSCRRRSS Trigger: TGAGGAGCGCCTGCGGCAAGAGCGAACCCATGCTCTCAAGACCAAAGAGCGAATGGCCCTGGAAGGCATGGGTATTGGCAGCGGGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CCA 72 bp | AGGCTGGCTTCGGGACAGGGCATTTCCAGAGGGAACTaGAGACCAGGGGTCTGCAGAAGGTCCCCAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLASGQGISRGN*RPGVCRRSPRG Trigger: TCCTCTTGGGGACCTTCTGCAGACCCCTGGTCTCCAGTTCCCTCTGGAAATGCCCTGTCCCGAAGCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 72 bp | GGGCCTGGGCACTGTCCCGGCTCTCCTTGGGTTCTGTaGATTCTAGAGGTTTGGCAAATGGGTCGAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GPGHCPGSPWVL*ILEVWQMGRRA Trigger: CGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 72 bp | CCGTGGGCAGGGCCTGGGCACTGTCCCGGCTCTCCTTaGGTTCTGTGGATTCTAGAGGTTTGGCAAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWAGPGHCPGSP*VLWILEVWQMG Trigger: ACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCAGGCCCTGCCCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 90 bp | TGGGCACTGTCCCGGCTCTCCTTGGGTTCTGTGGATTCTAGAGGTTaGGCAAATGGGTCGAAGGGCGAGGCACCACCTAGAGCAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WALSRLSLGSVDSRG*ANGSKGEAPPRAEV Trigger: CACCTCTGCTCTAGGTGGTGCCTCGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGACAGTGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CCA 72 bp | CCCGGCTCTCCTTGGGTTCTGTGGATTCTAGAGGTTTaGCAAATGGGTCGAAGGGCGAGGCACCACCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSPWVLWILEV*QMGRRARHHLE Trigger: CTCTAGGTGGTGCCTCGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 72 bp | GCATGGGTTCGCTCTTGCCGCAGGCGCTCCTCATCCTaGAGAAGGGCCATCACCTGTTTGACCTTCTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: AWVRSCRRRSSS*RRAITCLTFSR Trigger: TCGTGAGAAGGTCAAACAGGTGATGGCCCTTCTCAAGGATGAGGAGCGCCTGCGGCAAGAGCGAACCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 72 bp | CTGCCAATACCCATGCCTTCCAGGGCCATTCGCTCTTaGGTCTTGAGAGCATGGGTTCGCTCTTGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPIPMPSRAIRS*VLRAWVRSCRR Trigger: CCTGCGGCAAGAGCGAACCCATGCTCTCAAGACCAAAGAGCGAATGGCCCTGGAAGGCATGGGTATTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 72 bp | TCCCGGCTCTCCTTGGGTTCTGTGGATTCTAGAGGTTaGGCAAATGGGTCGAAGGGCGAGGCACCACCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRLSLGSVDSRG*ANGSKGEAPPR Trigger: TCTAGGTGGTGCCTCGCCCTTCGACCCATTTGCCAAACCTCTAGAATCCACAGAACCCAAGGAGAGCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 90 bp | GTCTTGAGAGCATGGGTTCGCTCTTGCCGCAGGCGCTCCTCATCCTaGAGAAGGGCCATCACCTGTTTGACCTTCTCACGAACATTGACG | + |
|
Preference number: 6 (lower is better) Translates to: VLRAWVRSCRRRSSS*RRAITCLTFSRTLT Trigger: CGTCAATGTTCGTGAGAAGGTCAAACAGGTGATGGCCCTTCTCAAGGATGAGGAGCGCCTGCGGCAAGAGCGAACCCATGCTCTCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
||
| CDS CAA 90 bp | AGCACACCCAGGTCAAGGGCTTCAGGTTCCTTCATGCCATTCTGCTaGCAACTGGGGCTGGAGTCTCCAAATGGGTCTAGCTCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: STPRSRASGSFMPFC*QLGLESPNGSSSTV Trigger: CACTGTGGAGCTAGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | CCCAGGTCAAGGGCTTCAGGTTCCTTCATGCCATTCTaGTTGCAACTGGGGCTGGAGTCTCCAAATGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PRSRASGSFMPF*LQLGLESPNGS Trigger: AGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS GCA 72 bp | CTAGCACACCCAGGTCAAGGGCTTCAGGTTCCTTCATaGCATTCTGCTTGCAACTGGGGCTGGAGTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LAHPGQGLQVPS*HSACNWGWSLQ Trigger: TTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCTGGGTGTGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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| CDS CAA 72 bp | AGGTCAAGGGCTTCAGGTTCCTTCATGCCATTCTGCTaGCAACTGGGGCTGGAGTCTCCAAATGGGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RSRASGSFMPFC*QLGLESPNGSS Trigger: GCTAGACCCATTTGGAGACTCCAGCCCCAGTTGCAAGCAGAATGGCATGAAGGAACCTGAAGCCCTTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127305.2 |
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