Pregenerated sensors for EPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024240Ensembl transcript IDs: ENSMUST00000028100.13, ENSMUST00000050542.6, ENSMUST00000115870.9
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGAGAGATTCGAGAGCTGCGCAGTGCTGCCGAGTCCCCACAGCTaGCACGGAACCGCACAAGTGCTCTCCATACTCCCTGCGTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: HERFESCAVLPSPHS*HGTAQVLSILPAFQ Trigger: TTGGAACGCAGGGAGTATGGAGAGCACTTGTGCGGTTCCGTGGCAGCTGTGGGGACTCGGCAGCACTGCGCAGCTCTCGAATCTCTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR CCA 90 bp | ATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTaGACTGGGCATTCAGACTTCGGTACTAACAAAGCAGTAGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: MFPGGIKNLKDNVCH*TGHSDFGTNKAVVV Trigger: GACTACTACTGCTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR GCA 90 bp | ATCACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATaGCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: ITMFPGGIKNLKDNV*HWTGHSDFGTNKAV Trigger: TACTGCTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCACCATGTCCCCAGGATaGAGTCCTGCTCCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QRKAPDICGSGLAAFWRITMSPG*SPAPRK Trigger: CTTCCTGGGAGCAGGACTGCATCCTGGGGACATGGT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCAGGAAATGGGACGACTaGGCTGTTTGTAGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QRKAPDICGSGLAAFWRIRKWDD*AVCRAA Trigger: TGCTGCCCTACAAACAGCCCAGTCGTCCCATTTCCT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR GCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGAGAGCTGCGCAGTGCTaGCGAGTCCCCACAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQRAAQC*RVPTAA Trigger: GGCAGCTGTGGGGACTCGGCAGCACTGCGCAGCTCT...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCAGGAAATGGGACGACTaGGCTGTTTGTAGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NWNDDTRTAITAFFSPISRKWDD*AVCRAA Trigger: TGCTGCCCTACAAACAGCCCAGTCGTCCCATTTCCT...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCACAGCACAGGAACCAATaGGGGTACAGTGTACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: LAGCFTNWNDDTRTAITAQHRNQ*GYSVQN Trigger: GTTTTGTACACTGTACCCTCATTGGTTCCTGTGCTG...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCACAGGAAGATCCCCATTaGACAGTACATTCCCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: LAGCFTNWNDDTRTAITAQEDPH*TVHSPF Trigger: AAACGGGGAATGTACTGTTCAATGGGGATCTTCCTG...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTAGAGCTGCGCAGTGCTaGCGAGTCCCCACAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTRAAQC*RVPTAA Trigger: GGCAGCTGTGGGGACTCGGCAGCACTGCGCAGCTCT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR GCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGTCGAGAGCTGCGCAGTaGTGCCGAGTCCCCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQSRAAQ*CRVPTA Trigger: AGCTGTGGGGACTCGGCAGCACTGCGCAGCTCTCGA...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR GCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTACCATGTCCCCAGGATaGAGTCCTGCTCCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTTMSPG*SPAPRK Trigger: CTTCCTGGGAGCAGGACTGCATCCTGGGGACATGGT...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTCAGGAAGATCCCCATTaGACAGTACATTCCCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGQEDPH*TVHSPF Trigger: AAACGGGGAATGTACTGTTCAATGGGGATCTTCCTG...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCACTCCGTTTGTGTACTTaGTTTAACACTTTTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LAGCFTNWNDDTRTAITALRLCT*FNTFWC Trigger: ACACCAAAAAGTGTTAAATCAAGTACACAAACGGAG...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCGCAAAGCATCACAAATaGACAGTTCTGTATTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: NWNDDTRTAITAFFSPISAKHHK*TVLYSS Trigger: ACTTGAATACAGAACTGTTCATTTGTGATGCTTTGC...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATATCCGCACCATGCACATaGTGTGATGACACCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: RKLKDPEGTKLCYTIYKISAPCT*CDDTSY Trigger: GTAGCTGGTGTCATCACATCATGTGCATGGTGCGGA...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGCAGCACAGGAACCAATaGGGGTACAGTGTACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVQHRNQ*GYSVQN Trigger: GTTTTGTACACTGTACCCTCATTGGTTCCTGTGCTG...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGGCCTCGCAGCCTTCTaGAGAATCTTAAAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VMPWVYFVRILSQCFQVGGLAAF*RILKGK Trigger: TTTTCCTTTTAAGATTCTCCAGAAGGCTGCGAGGCC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGCAAAGCATCACAAATaGACAGTTCTGTATTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVAKHHK*TVLYSS Trigger: ACTTGAATACAGAACTGTTCATTTGTGATGCTTTGC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR GCA 72 bp | TTCGAGAGCTGCGCAGTGCTGCCGAGTCCCCACAGCTaGCACGGAACCGCACAAGTGCTCTCCATACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FESCAVLPSPHS*HGTAQVLSILP Trigger: AGGGAGTATGGAGAGCACTTGTGCGGTTCCGTGGCAGCTGTGGGGACTCGGCAGCACTGCGCAGCTCTCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR GCA 72 bp | AACATTAGTGCTTTAAGTACCAGGGCCGCCCAAGCTTaGAGACAGGCGGGGACGGGAGAATTCAAGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: NISALSTRAAQA*RQAGTGEFKRL Trigger: AAGTCTCTTGAATTCTCCCGTCCCCGCCTGTCTGCAAGCTTGGGCGGCCCTGGTACTTAAAGCACTAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCACCAGGAAGATCCCCATaGAACAGTACATTCCCCGTT | + |
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Preference number: 3 (lower is better) Translates to: LAGCFTNWNDDTRTAITAPGRSP*NSTFPV Trigger: AACGGGGAATGTACTGTTCAATGGGGATCTTCCTGG...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGAAGGCACCCGATATTaGTGGTTCTGGCCTCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: VMPWVYFVRILSQCFQVGEGTRY*WFWPRS Trigger: GCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR CCA 72 bp | ATGTTTCCAAAGGAAGGCACCCGATATTTGTGGTTCTaGCCTCGCAGCCTTCTGGAGAATCTTAAAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: MFPKEGTRYLWF*PRSLLENLKRK Trigger: TTTCCTTTTAAGATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTGGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGACCAGGAAGATCCCCATaGAACAGTACATTCCCCGTT | + |
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Preference number: 3 (lower is better) Translates to: VMPWVYFVRILSQCFQVGPGRSP*NSTFPV Trigger: AACGGGGAATGTACTGTTCAATGGGGATCTTCCTGG...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTTCATTTTTAGCTTGTaGCGCGTCCTAATGCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: NWNDDTRTAITAFFSPISFIFSL*RVLMLV Trigger: TACTAGCATTAGGACGCGCAACAAGCTAAAAATGAA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR GCA 72 bp | TTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATaGCATTGGACTGGGCATTCAGACTTCGGTACTAAC | + |
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Preference number: 3 (lower is better) Translates to: FPGGIKNLKDNV*HWTGHSDFGTN Trigger: GTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR CCA 72 bp | GGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTaGACTGGGCATTCAGACTTCGGTACTAACAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GGIKNLKDNVCH*TGHSDFGTNKA Trigger: TGCTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGATAAGAAAAGAAAGGTaGAAGCACGAGAGATTCGAG | + |
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Preference number: 3 (lower is better) Translates to: LRITYAIGLGIQTSVLTKIRKER*KHERFE Trigger: CTCGAATCTCTCGTGCTTCAACCTTTCTTTTCTTAT...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGACTTCATTTTTAGCTaGTTGCGCGTCCTAATGCTA | + |
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Preference number: 3 (lower is better) Translates to: VMPWVYFVRILSQCFQVGDFIFS*LRVLML Trigger: TAGCATTAGGACGCGCAACAAGCTAAAAATGAAGTC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| 3UTR-3UTR CAA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAATAAGAAAAGAAAGGTaGAAGCACGAGAGATTCGAG | + |
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Preference number: 3 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLIRKER*KHERFE Trigger: CTCGAATCTCTCGTGCTTCAACCTTTCTTTTCTTAT...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR TCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCGCAGGACTCTGCTGCTaGGGGGCGGCAGCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIAGLCC*GAAADG Trigger: CCCATCTGCTGCCGCCCCTCAGCAGCAGAGTCCTGC...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCGTGGGCCCCAGGCTGTaGTGCTCCTGCTCGACTGAT | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIVGPRL*CSCSTD Trigger: ATCAGTCGAGCAGGAGCAGCACAGCCTGGGGCCCAC...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCATTTCCAGGGTCAGGTaGAGCAGCTCCCGTTTACTC | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIISRVR*SSSRLL Trigger: GAGTAAACGGGAGCTGCTGCACCTGACCCTGGAAAT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCAGTGTGCTGAGCCACTaGTACTTCTGTTCTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRISVLSH*YFCSGW Trigger: CCACCCAGAACAGAAGTAGCAGTGGCTCAGCACACT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR TCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCCATACTGTCATAGTCTaGATGCGCTCTGTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIHTVIV*MRSVQH Trigger: GTGCTGGACAGAGCGCATTCAGACTATGACAGTATG...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCGCCAGCTGCTGCTGGTaGTGCTGGTACTGTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISASCCW*CWYCSA Trigger: AGCCGAACAGTACCAGCAGCACCAGCAGCAGCTGGC...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGTGGCTTCCTGCAGACTaGCTGGCTGCTGACCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKWLPAD*LAADRC Trigger: GCAGCGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAGGTACTGTTCGGCTGTaGATGCACAGTGTGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAGTVRL*MHSVLS Trigger: GCTCAGCACACTGTGCATTCACAGCCGAACAGTACC...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | TCCACAACAAAACTGGAGCACACAGTCCATGGGAATCCTCGACTTCCTTCAACTATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: STTKLEHTVHGNPRLPSTIEAYS*RSGRSS Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...AGTTGAAGGAAGTCGAGGATTCCCATGGACTGTGTGCTCCAGTTTTGTTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050542.6 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAGCCGTACACCTGCTGTaGAGAAATAGCCCGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAAVHLL*RNSPLK Trigger: CTTCAGCGGGCTATTTCTGCACAGCAGGTGTACGGC...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTGCATGAGTGCCAGCTaGTGCTGGTGCTGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISCMSAS*CWCCWY Trigger: GTACCAGCAGCACCAGCAGCAGCTGGCACTCATGCA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCAGAAGCAGCAAACTGTaGACTAGCAGAGTCCAACGT | + |
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Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIRSSKL*TSRVQR Trigger: ACGTTGGACTCTGCTAGTGCACAGTTTGCTGCTTCT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCACTGCTACTTCTGTTCTaGGTGGAGGTGCTGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITALLLLF*VEVLHV Trigger: CACGTGCAGCACCTCCACCCAGAACAGAAGTAGCAG...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCAGTGCCAGCTGCTGCTaGTGCTGCTGGTACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISSASCC*CCWYCS Trigger: CGAACAGTACCAGCAGCACCAGCAGCAGCTGGCACT...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATTGGCTTCCTGCAGACTaGCTGGCTGCTGACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYWLPAD*LAADRC Trigger: GCAGCGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGCAGGACTCTGCTGCTaGGGGGCGGCAGCAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQAGLCC*GAAADG Trigger: CCCATCTGCTGCCGCCCCTCAGCAGCAGAGTCCTGC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCCGAGGTATTGGGTTCTaGGGTATTGGCAAACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIRGIGF*GIGKLI Trigger: AATCAGTTTGCCAATACCTCAGAACCCAATACCTCG...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGGCAAGCTGCTGCTGCTaGATGAGTGCCAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKASCCC*MSASCC Trigger: GCAGCAGCTGGCACTCATGCAGCAGCAGCAGCTTGC...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCACTCGTATGTACAAGTaGCGTTGGTGTAGTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRITRMYK*RWCSAT Trigger: AGTAGCACTACACCAACGGCACTTGTACATACGAGT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCTGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRICYCVV*YVVQCW Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCA...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCCTACGTCACCTCCATTaGTACTGTGTTGTCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRILRHLH*YCVVCY Trigger: ATAGCAGACAACACAGTAGCAATGGAGGTGACGTAG...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCATTTAGCACTGAAGCCTaGCAGTGCAGCAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAFSTEA*QCSRTL Trigger: CAGAGTCCTGCTGCACTGCCAGGCTTCAGTGCTAAA...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCATCTGTCCGAGGTATTaGGTTCTGAGGTATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRIICPRY*VLRYWQ Trigger: TTGCCAATACCTCAGAACCCAATACCTCGGACAGAT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAGAGGTGCTGCACGTGTaGGCCCCAGGCTGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLEVLHV*APGCAA Trigger: AGCAGCACAGCCTGGGGCCCACACGTGCAGCACCTC...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTACTTCTGTTCTGGGTaGAGGTGCTGCACGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISYFCSG*RCCTCG Trigger: CCCACACGTGCAGCACCTCCACCCAGAACAGAAGTA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCCTGCTACTTCTGTTCTaGGTGGAGGTGCTGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISLLLLF*VEVLHV Trigger: CACGTGCAGCACCTCCACCCAGAACAGAAGTAGCAG...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCGCAGCAGTTACTTGGTaGCTCAGTGAGCTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISAAVTW*LSELWE Trigger: TTCCCACAGCTCACTGAGTCACCAAGTAACTGCTGC...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTCCGACCCGTCTTCGTaGAAATCCAAGACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISSDPSS*KSKTPL Trigger: CAGAGGTGTCTTGGATTTGCACGAAGACGGGTCGGA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATGCCAGCTGCTGCTGGTaGTGCTGGTACTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYASCCW*CWYCSA Trigger: AGCCGAACAGTACCAGCAGCACCAGCAGCAGCTGGC...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCGAAACAAAACCCTGTTaGGCGGCGGCAGAGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISETKPC*AAAEEL Trigger: TAGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTC...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCTGCTATGTTGTTCAGTaGTGGCTTTTCCGATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QRKAPDICGSGLAAFWRICYVVQ*WLFRFM Trigger: CATGAATCGGAAAAGCCAGCACTGAACAACATAGCA...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCATCATCCTTCACCTTaGACCCCAGCAGCTGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKHHPSP*TPAAVP Trigger: CGGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGCAAGCTGCTGCTGCTaGATGAGTGCCAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVASCCC*MSASCC Trigger: GCAGCAGCTGGCACTCATGCAGCAGCAGCAGCTTGC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCCAGAACCTGAGTTGTTaGAGAGCTGGCAGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISQNLSC*RAGSSY Trigger: GTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTG...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAATAAGTAGGCTTCACTaGCTGTCTCTGTGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAISRLH*LSLCHD Trigger: GTCATGGCACAGAGACAGCCAGTGAAGCCTACTTAT...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAAATCCAAGACACCTCTaGGGTACGGTGAGAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITANPRHL*GTVRVV Trigger: AACTACTCTCACCGTACCCCAGAGGTGTCTTGGATT...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATAGAGGTGCTGCACGTGTaGGCCCCAGGCTGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKIEVLHV*APGCAA Trigger: AGCAGCACAGCCTGGGGCCCACACGTGCAGCACCTC...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTATACCTCTTCTCCATaGTTTCCAGGGTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISYTSSP*FPGSGA Trigger: TGCACCTGACCCTGGAAATCATGGAGAAGAGGTATA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTCAGAGGCTCTTCATCTaGGCTGGGGAAGTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGQRLFI*AGEVVL Trigger: CAGTACGACTTCCCCAGCTCAGATGAAGAGCCTCTG...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAGAGGTATTGGCAAACTaGTTGACTGGAGAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAEVLAN*LTGEGC Trigger: ACAACCTTCTCCAGTCAATCAGTTTGCCAATACCTC...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATGGTACTGTTCGGCTGTaGATGCACAGTGTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYGTVRL*MHSVLS Trigger: GCTCAGCACACTGTGCATTCACAGCCGAACAGTACC...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGIEAYS*RSGRSS Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028100.13 |
||
| CDS-3UTR GCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATAGTGGGCCCCAGGCTGTaGTGCTCCTGCTCGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKIVGPRL*CSCSTD Trigger: ATCAGTCGAGCAGGAGCAGCACAGCCTGGGGCCCAC...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATTTCCTGCAGACTGACTaGCTGCTGACCGCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYFLQTD*LLTAAF Trigger: AAAGGCAGCGGTCAGCAGCCAGTCAGTCTGCAGGAA...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCATAAGTAGGCTTCACTaGCTGTCTCTGTGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISISRLH*LSLCHD Trigger: GTCATGGCACAGAGACAGCCAGTGAAGCCTACTTAT...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTTACTTCTGTTCTGGGTaGAGGTGCTGCACGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGYFCSG*RCCTCG Trigger: CCCACACGTGCAGCACCTCCACCCAGAACAGAAGTA...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAATGAGGAGGGGACCTTaGAAACTTGACAATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAMRRGP*KLDNLL Trigger: CAGCAAATTGTCAAGTTTCCAAGGTCCCCTCCTCAT...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| 3UTR CAA 72 bp | GGACGGGAGAATTCAAGAGACTTCATTTTTAGCTTGTaGCGCGTCCTAATGCTAGTAGACCAGGAAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRENSRDFIFSL*RVLMLVDQEDP Trigger: GGGATCTTCCTGGTCTACTAGCATTAGGACGCGCAACAAGCTAAAAATGAAGTCTCTTGAATTCTCCCGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| 3UTR CAA 72 bp | CGGGGACGGGAGAATTCAAGAGACTTCATTTTTAGCTaGTTGCGCGTCCTAATGCTAGTAGACCAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRENSRDFIFS*LRVLMLVDQED Trigger: ATCTTCCTGGTCTACTAGCATTAGGACGCGCAACAAGCTAAAAATGAAGTCTCTTGAATTCTCCCGTCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCCTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISLKGCM*MSCFGI Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCATACTGTCATAGTCTaGATGCGCTCTGTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKHTVIV*MRSVQH Trigger: GTGCTGGACAGAGCGCATTCAGACTATGACAGTATG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCCGAGGTATTGGGTTCTaGGGTATTGGCAAACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISRGIGF*GIGKLI Trigger: AATCAGTTTGCCAATACCTCAGAACCCAATACCTCG...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCTGCTCCTGCTCGACTaGTACTCCTGTGTAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKLLLLD*YSCVTF Trigger: GAAAGTTACACAGGAGTATCAGTCGAGCAGGAGCAG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGGAATGCACAGTGTGCTaGGCCACTGCTACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKECTVC*ATATSV Trigger: AACAGAAGTAGCAGTGGCTCAGCACACTGTGCATTC...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATGCAGCAGTTACTTGGTaGCTCAGTGAGCTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYAAVTW*LSELWE Trigger: TTCCCACAGCTCACTGAGTCACCAAGTAACTGCTGC...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGGGACCTTGGAAACTTaGCAATTTGCTGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGGTLET*QFAAAA Trigger: GGCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGCCGTACACCTGCTGTaGAGAAATAGCCCGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVAVHLL*RNSPLK Trigger: CTTCAGCGGGCTATTTCTGCACAGCAGGTGTACGGC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATTCTCGCCGTACACCTaGTGTGCAGAAATAGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLFSPYT*CAEIAR Trigger: GCGGGCTATTTCTGCACAGCAGGTGTACGGCGAGAA...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATATTTCCAGGGTCAGGTaGAGCAGCTCCCGTTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYISRVR*SSSRLL Trigger: GAGTAAACGGGAGCTGCTGCACCTGACCCTGGAAAT...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCACTGGCTGTCTCTGTaGCATGACCTCAGACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKHWLSL*HDLRHD Trigger: ATCATGTCTGAGGTCATGGCACAGAGACAGCCAGTG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGTGCATGAGTGCCAGCTaGTGCTGGTGCTGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQCMSAS*CWCCWY Trigger: GTACCAGCAGCACCAGCAGCAGCTGGCACTCATGCA...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGTGAATGAGCTGCTTTaGCATCCTGAACTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGVNELL*HPELPR Trigger: CCTGGGGAGTTCAGGATGCCAAAGCAGCTCATTCAC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTTTCCTGCAGACTGACTaGCTGCTGACCGCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTFLQTD*LLTAAF Trigger: AAAGGCAGCGGTCAGCAGCCAGTCAGTCTGCAGGAA...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGCAGAAATAGCCCGCTaGAGATGGTGTTCCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQAEIAR*RWCSDS Trigger: GGAGTCGGAACACCATCTTCAGCGGGCTATTTCTGC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028100.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAGCCATCTACATGATTTaGTATCGACTAGTATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAAIYMI*YRLVSD Trigger: GTCAGATACTAGTCGATATCAAATCATGTAGATGGC...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAGGGACCTTGGAAACTTaGCAATTTGCTGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLGTLET*QFAAAA Trigger: GGCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCC...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATCACTGGCTGTCTCTGTaGCATGACCTCAGACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYHWLSL*HDLRHD Trigger: ATCATGTCTGAGGTCATGGCACAGAGACAGCCAGTG...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGTCCGACCCGTCTTCGTaGAAATCCAAGACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVSDPSS*KSKTPL Trigger: CAGAGGTGTCTTGGATTTGCACGAAGACGGGTCGGA...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCCTAGGTATATGCCGTaGGTTTATTGGGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKPRYMP*VYWGDR Trigger: TCTGTCACCCCAATAAACGCACGGCATATACCTAGG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCCTCCTCAAACTGCAATaGGCAGATGTCCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISLLKLQ*ADVHFL Trigger: AAGAAAATGGACATCTGCCCATTGCAGTTTGAGGAG...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATAAGTGCCAGCTGCTGCTaGTGCTGCTGGTACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKISASCC*CCWYCS Trigger: CGAACAGTACCAGCAGCACCAGCAGCAGCTGGCACT...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATGAGTTGTTGCAGAGCTaGCAGCAGTTACTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYELLQS*QQLLGD Trigger: GTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTC...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATACAGAGGCTCTTCATCTaGGCTGGGGAAGTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKIQRLFI*AGEVVL Trigger: CAGTACGACTTCCCCAGCTCAGATGAAGAGCCTCTG...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATTGGAGAAGGTTGTGGTaGGGAAAGCATGTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYWRRLW*GKHVQI Trigger: GATTTGGACATGCTTTCCTCACCACAACCTTCTCCA...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGTATTGGCAAACTGATTaGCTGGAGAAGGTTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKYWQTD*LEKVVV Trigger: CACCACAACCTTCTCCAGTCAATCAGTTTGCCAATA...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGCTGCTCCTGCTCGACTaGTACTCCTGTGTAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVLLLLD*YSCVTF Trigger: GAAAGTTACACAGGAGTATCAGTCGAGCAGGAGCAG...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGTTCCCAAACAGAACCTaGGTTGTTGCAGAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVFPNRT*VVAELA Trigger: TGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAA...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGTCCGAGGCCTAAAGTaGCGCCATCTACATGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVVRGLK*RHLHDL Trigger: CAAATCATGTAGATGGCGGCACTTTAGGCCTCGGAC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCATATGTTGTTCAGTGCTaGCTTTTCCGATTCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFTNWNDDTRTAITAYVVQC*LFRFMI Trigger: AATCATGAATCGGAAAAGCCAGCACTGAACAACATA...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTTGGAGAAGGTTGTGGTaGGGAAAGCATGTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTWRRLW*GKHVQI Trigger: GATTTGGACATGCTTTCCTCACCACAACCTTCTCCA...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGAGGTATTGGCAAACTaGTTGACTGGAGAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGEVLAN*LTGEGC Trigger: ACAACCTTCTCCAGTCAATCAGTTTGCCAATACCTC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGAATGCACAGTGTGCTaGGCCACTGCTACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQECTVC*ATATSV Trigger: AACAGAAGTAGCAGTGGCTCAGCACACTGTGCATTC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGTCCGAGGCCTAAAGTaGCGCCATCTACATGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQVRGLK*RHLHDL Trigger: CAAATCATGTAGATGGCGGCACTTTAGGCCTCGGAC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTAGTGTGCTGAGCCACTaGTACTTCTGTTCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTSVLSH*YFCSGW Trigger: CCACCCAGAACAGAAGTAGCAGTGGCTCAGCACACT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTGAAACAAAACCCTGTTaGGCGGCGGCAGAGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTETKPC*AAAEEL Trigger: TAGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTC...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAAGAAGCAGCAAACTGTaGACTAGCAGAGTCCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLRSSKL*TSRVQR Trigger: ACGTTGGACTCTGCTAGTGCACAGTTTGCTGCTTCT...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAACTCGTATGTACAAGTaGCGTTGGTGTAGTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGTRMYK*RWCSAT Trigger: AGTAGCACTACACCAACGGCACTTGTACATACGAGT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCAGAACCTGAGTTGTTaGAGAGCTGGCAGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQQNLSC*RAGSSY Trigger: GTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTG...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTACCTAGGTATATGCCGTaGGTTTATTGGGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLPRYMP*VYWGDR Trigger: TCTGTCACCCCAATAAACGCACGGCATATACCTAGG...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAAAAGTCCTAGGTATATaGCGTGCGTTTATTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGKVLGI*RAFIGV Trigger: CACCCCAATAAACGCACGGCATATACCTAGGACTTT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTTGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGCYCVV*YVVQCW Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCA...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTTCCTGGTGTTTGAACTaGCTGCTGTTAGTAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTSWCLN*LLLVIG Trigger: CCCGATTACTAACAGCAGCCAGTTCAAACACCAGGA...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTTTAGCACTGAAGCCTaGCAGTGCAGCAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTFSTEA*QCSRTL Trigger: CAGAGTCCTGCTGCACTGCCAGGCTTCAGTGCTAAA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGAGTTGTTGCAGAGCTaGCAGCAGTTACTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQELLQS*QQLLGD Trigger: GTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCTATGTTGTTCAGTGCTaGCTTTTCCGATTCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: NWNDDTRTAITAFFSPISYVVQC*LFRFMI Trigger: AATCATGAATCGGAAAAGCCAGCACTGAACAACATA...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTACTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLLKGCM*MSCFGI Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGTATACCTCTTCTCCATaGTTTCCAGGGTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQYTSSP*FPGSGA Trigger: TGCACCTGACCCTGGAAATCATGGAGAAGAGGTATA...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGGCCATCTACATGATTTaGTATCGACTAGTATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRITYAIGLGIQTSVLTKAIYMI*YRLVSD Trigger: GTCAGATACTAGTCGATATCAAATCATGTAGATGGC...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTTCCCAAACAGAACCTaGGTTGTTGCAGAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTFPNRT*VVAELA Trigger: TGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTGGCTTTTCCGATTCATaGTTTTCCCTTGGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGGFSDS*FSLGTE Trigger: TTCAGTTCCAAGGGAAAATCATGAATCGGAAAAGCC...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATATCATCTCCTCAAACTaGAATGGGCAGATGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPQVQSITNEQFCIQVTYIISSN*NGQMSI Trigger: AATGGACATCTGCCCATTGCAGTTTGAGGAGATGAT...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTATCATCTCCTCAAACTaGAATGGGCAGATGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGIISSN*NGQMSI Trigger: AATGGACATCTGCCCATTGCAGTTTGAGGAGATGAT...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGIVLTA*FPTESK Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTAAAGTCCTAGGTATATaGCGTGCGTTTATTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTKVLGI*RAFIGV Trigger: CACCCCAATAAACGCACGGCATATACCTAGGACTTT...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGATGCTATGTTGTTCAGTaGTGGCTTTTCCGATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGCYVVQ*WLFRFM Trigger: CATGAATCGGAAAAGCCAGCACTGAACAACATAGCA...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTACTCTGCTTCAGGAACTaGAATAACCATGTTATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLLCFRN*NNHVIP Trigger: CGGGATAACATGGTTATTCCAGTTCCTGAAGCAGAG...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAACTCCCCAGGGTATATaGACTCATAGTAAGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLTPQGI*THSKRC Trigger: ACATCGCTTACTATGAGTCCATATACCCTGGGGAGT...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGACTCCTCAAACTGCAATaGGCAGATGTCCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGLLKLQ*ADVHFL Trigger: AAGAAAATGGACATCTGCCCATTGCAGTTTGAGGAG...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTTGTGTAACTTTCTACTaGAGAGTTCACCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGCVTFY*RVHHCH Trigger: GTGACAGTGGTGAACTCTCCAGTAGAAAGTTACACA...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGATGAGGAGGGGACCTTaGAAACTTGACAATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVMRRGP*KLDNLL Trigger: CAGCAAATTGTCAAGTTTCCAAGGTCCCCTCCTCAT...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGACGGTTTTTCCGAGTTTaGATTTTCTCAGTTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VMPWVYFVRILSQCFQVGRFFRV*IFSVRL Trigger: AAGACGAACTGAGAAAATGCAAACTCGGAAAAACCG...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTCCTGGTGTTTGAACTaGCTGCTGTTAGTAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTSWCLN*LLLVIG Trigger: CCCGATTACTAACAGCAGCCAGTTCAAACACCAGGA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTAATCCAAGACACCTCTaGGGTACGGTGAGAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTNPRHL*GTVRVV Trigger: AACTACTCTCACCGTACCCCAGAGGTGTCTTGGATT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGATCTGTCCGAGGTATTaGGTTCTGAGGTATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQICPRY*VLRYWQ Trigger: TTGCCAATACCTCAGAACCCAATACCTCGGACAGAT...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGTGTGTAACTTTCTACTaGAGAGTTCACCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVCVTFY*RVHHCH Trigger: GTGACAGTGGTGAACTCTCCAGTAGAAAGTTACACA...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATATATTGGCAAACTGATTaGCTGGAGAAGGTTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKIYWQTD*LEKVVV Trigger: CACCACAACCTTCTCCAGTCAATCAGTTTGCCAATA...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR TCA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGGCTTTTCCGATTCATaGTTTTCCCTTGGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQGFSDS*FSLGTE Trigger: TTCAGTTCCAAGGGAAAATCATGAATCGGAAAAGCC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATACTACGTCACCTCCATTaGTACTGTGTTGTCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKILRHLH*YCVVCY Trigger: ATAGCAGACAACACAGTAGCAATGGAGGTGACGTAG...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTCTCTGCTTCAGGAACTaGAATAACCATGTTATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTLCFRN*NNHVIP Trigger: CGGGATAACATGGTTATTCCAGTTCCTGAAGCAGAG...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATAACTCCCCAGGGTATATaGACTCATAGTAAGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLKDPEGTKLCYTIYKITPQGI*THSKRC Trigger: ACATCGCTTACTATGAGTCCATATACCCTGGGGAGT...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTAGATCAGCCTTATCTTaGTTGTTAACTTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTRSALS*LLTLNS Trigger: GGAGTTCAAAGTTAACAAGCAAGATAAGGCTGATCT...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR GCA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTIVLTA*FPTESK Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | TCGGCTGTGAATGCACAGTGTGCTGAGCCACTGCTACTTCTGTTCTaGGTGGAGGTGCTGCACGTGTGGGCCCCAGGCTGTGCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAVNAQCAEPLLLLF*VEVLHVWAPGCAAP Trigger: AGGAGCAGCACAGCCTGGGGCCCACACGTGCAGCACCTCCACCCAGAACAGAAGTAGCAGTGGCTCAGCACACTGTGCATTCACAGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 90 bp | GGACGCCATTCACCCCGAGCCCGAGCACCACATCATCCTTCACCTTaGACCCCAGCAGCTGTTCCGACGTCATCAAAGCAGAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRHSPRARAPHHPSP*TPAAVPTSSKQKQQ Trigger: TTGCTGCTTCTGCTTTGATGACGTCGGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGTGGTGCTCGGGCTCGGGGTGAATGGCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 90 bp | AGGTGCTGCACGTGTGGGCCCCAGGCTGTGCTGCTCCTGCTCGACTaGTACTCCTGTGTAACTTTCTACTGGAGAGTTCACCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RCCTCGPQAVLLLLD*YSCVTFYWRVHHCH Trigger: GTGACAGTGGTGAACTCTCCAGTAGAAAGTTACACAGGAGTATCAGTCGAGCAGGAGCAGCACAGCCTGGGGCCCACACGTGCAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 90 bp | GGAAAGCATGTCCAAATCCAGGTGGTGAAACATACTGTCATAGTCTaGATGCGCTCTGTCCAGCACGACCCTTCCACCACGTCCGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKHVQIQVVKHTVIV*MRSVQHDPSTTSDP Trigger: CGGGTCGGACGTGGTGGAAGGGTCGTGCTGGACAGAGCGCATTCAGACTATGACAGTATGTTTCACCACCTGGATTTGGACATGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCACATCATCCTTCACCTaGAACCCCAGCAGCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRKAPDICGSGLAAFWRITSSFT*NPSSCS Trigger: GGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 90 bp | CCCCAGCAGCTGTTCCGACGTCATCAAAGCAGAAGCAGCAAACTGTaGACTAGCAGAGTCCAACGTCTTAGAAACAAAACCCTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PQQLFRRHQSRSSKL*TSRVQRLRNKTLLR Trigger: GCGCAACAGGGTTTTGTTTCTAAGACGTTGGACTCTGCTAGTGCACAGTTTGCTGCTTCTGCTTTGATGACGTCGGAACAGCTGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCACAGAACCTGAGTTGTaGCAGAGCTGGCAGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QRKAPDICGSGLAAFWRITEPEL*QSWQQL Trigger: TAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGT...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 90 bp | AACTGGAATAACCATGTTATCCCGCTTCTCGCCGTACACCTGCTGTaGAGAAATAGCCCGCTGAAGATGGTGTTCCGACTCCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NWNNHVIPLLAVHLL*RNSPLKMVFRLLFL Trigger: AAGGAAGAGGAGTCGGAACACCATCTTCAGCGGGCTATTTCTGCACAGCAGGTGTACGGCGAGAAGCGGGATAACATGGTTATTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028100.13 |
||
| CDS CCA 90 bp | CTTCCACCACGTCCGACCCGTCTTCGTGCAAATCCAAGACACCTCTaGGGTACGGTGAGAGTAGTTAAGCAATATCTATATCGCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPRPTRLRANPRHL*GTVRVVKQYLYRTS Trigger: GGATGTGCGATATAGATATTGCTTAACTACTCTCACCGTACCCCAGAGGTGTCTTGGATTTGCACGAAGACGGGTCGGACGTGGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 90 bp | CTTGGAACTGAATCTACAGAGGATGAGGAGGGGACCTTGGAAACTTaGCAATTTGCTGCAGCAGCCAGCTTTAAGGCAGATGGCGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LGTESTEDEEGTLET*QFAAAASFKADGGT Trigger: TGTTCCGCCATCTGCCTTAAAGCTGGCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCCCTCCTCATCCTCTGTAGATTCAGTTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | TTAATCGGATGTTGTTCCCAAACAGAACCTGAGTTGTTGCAGAGCTaGCAGCAGTTACTTGGTGACTCAGTGAGCTGTGGGAACCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIGCCSQTEPELLQS*QQLLGDSVSCGNPK Trigger: CTTCGGGTTCCCACAGCTCACTGAGTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAACAACATCCGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAATTGGGGTGACAGAGTaGACAGTGGGGACAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFTNWNDDTRTAITAIGVTE*TVGTDE Trigger: CTCATCTGTCCCCACTGTCAACTCTGTCACCCCAAT...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | GCTGTTAGTAATCGGGATGATGGGGATGGCATAAGTAGGCTTCACTaGCTGTCTCTGTGCCATGACCTCAGACATGATCTCTCCACTATA | + |
|
Preference number: 5 (lower is better) Translates to: AVSNRDDGDGISRLH*LSLCHDLRHDLSTI Trigger: TATAGTGGAGAGATCATGTCTGAGGTCATGGCACAGAGACAGCCAGTGAAGCCTACTTATGCCATCCCCATCATCCCGATTACTAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCAGGAACTACTATTTGCTaGCTGCTGCTGCTGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFTNWNDDTRTAITAGTTIC*LLLLSL Trigger: CAGACTCAGCAGCAGCAGCAAGCAAATAGTAGTTCC...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAAGGCACCCGATATTTGTGGTTCTGGCCTCGCAGCCTTCTGGAGAATCTCCATTGCTACTGTGTaGTCTGCTATGTTGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRKAPDICGSGLAAFWRISIATV*SAMLFS Trigger: ACTGAACAACATAGCAGACAACACAGTAGCAATGGA...GATTCTCCAGAAGGCTGCGAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 90 bp | GAACTCCCCAGGGTATATGGACTCATAGTAAGCGATGTTACTCTCTaGTTCAGGAACTGGAATAACCATGTTATCCCGCTTCTCGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELPRVYGLIVSDVTL*FRNWNNHVIPLLAV Trigger: TACGGCGAGAAGCGGGATAACATGGTTATTCCAGTTCCTGAAGCAGAGAGTAACATCGCTTACTATGAGTCCATATACCCTGGGGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | GTATATGGACTCATAGTAAGCGATGTTACTCTCTGCTTCAGGAACTaGAATAACCATGTTATCCCGCTTCTCGCCGTACACCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VYGLIVSDVTLCFRN*NNHVIPLLAVHLLC Trigger: GCACAGCAGGTGTACGGCGAGAAGCGGGATAACATGGTTATTCCAGTTCCTGAAGCAGAGAGTAACATCGCTTACTATGAGTCCATATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | CTGTTCAGCGTCCAAGCTAAAAGGCTGTATGTGAATGAGCTGCTTTaGCATCCTGAACTCCCCAGGGTATATGGACTCATAGTAAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFSVQAKRLYVNELL*HPELPRVYGLIVSD Trigger: ATCGCTTACTATGAGTCCATATACCCTGGGGAGTTCAGGATGCCAAAGCAGCTCATTCACATACAGCCTTTTAGCTTGGACGCTGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGAGAAACAAAACCCTGTaGCGCGGCGGCAGAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LRITYAIGLGIQTSVLTKRNKTL*RGGRGT Trigger: AGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTCT...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 90 bp | TTATCTTGCTTGTTAACTTTGAACTCCTTCGAGTCCGTGGCATCCTaGTGTTTGAACTGGCTGCTGTTAGTAATCGGGATGATGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSCLLTLNSFESVAS*CLNWLLLVIGMMGM Trigger: CATCCCCATCATCCCGATTACTAACAGCAGCCAGTTCAAACACCAGGATGCCACGGACTCGAAGGAGTTCAAAGTTAACAAGCAAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTAACAAAGCTGAGGTGTAAGCCCTaGTATACTCCTGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRITYAIGLGIQTSVLTKLRCKP*YTPEAG Trigger: TCCTGCCTCAGGAGTATACAAGGGCTTACACCTCAG...CTTTGTTAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AACTGGAATGACGATACACGGACAGCAATTACCGCATTCTTCTCCCCTATATCCAAGGCTGTAACAAAGTaGAACCTGCTGTCGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NWNDDTRTAITAFFSPISKAVTK*NLLSKD Trigger: GTCCTTCGACAGCAGGTTCAACTTTGTTACAGCCTT...GGATATAGGGGAGAAGAATGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 90 bp | GGCCTAAAGTGCCGCCATCTACATGATTTGATATCGACTAGTATCTaGCTGAGGTCTTTAGAGGAAGATCTGTCCGAGGTATTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKCRHLHDLISTSI*LRSLEEDLSEVLGS Trigger: AGAACCCAATACCTCGGACAGATCTTCCTCTAAAGACCTCAGTCAGATACTAGTCGATATCAAATCATGTAGATGGCGGCACTTTAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAATTGGGGTGACAGAGTaGACAGTGGGGACAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMPWVYFVRILSQCFQVGIGVTE*TVGTDE Trigger: CTCATCTGTCCCCACTGTCAACTCTGTCACCCCAAT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGGGGACCTTGGAAACTaGACAATTTGCTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VMPWVYFVRILSQCFQVGGDLGN*TICCSS Trigger: GCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCCC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGCTGTTTTACAAACTGGAATGACGATACACGGACAGCAATTACCGCATCCATTGCTACTGTGTaGTCTGCTATGTTGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFTNWNDDTRTAITASIATV*SAMLFS Trigger: ACTGAACAACATAGCAGACAACACAGTAGCAATGGA...TGCGGTAATTGCTGTCCGTGTATCGTCATTCCAGTTTGTAAAACAGCCAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGTGGCATCCTGGTGTTaGAACTGGCTGCTGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VMPWVYFVRILSQCFQVGVASWC*NWLLLV Trigger: TACTAACAGCAGCCAGTTCAAACACCAGGATGCCAC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTACATCATCCTTCACCTaGAACCCCAGCAGCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTTSSFT*NPSSCS Trigger: GGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGT...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGCTGAGGTGTAAGCCCTaGTATACTCCTGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVLRCKP*YTPEAG Trigger: TCCTGCCTCAGGAGTATACAAGGGCTTACACCTCAG...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGATCTGTCCGAGGTATaGGGTTCTGAGGTATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVDLSEV*GSEVLA Trigger: TGCCAATACCTCAGAACCCAATACCTCGGACAGATC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | TTTTCACATGATACACAGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTAGATCTGTCCGAGGTATaGGGTTCTGAGGTATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSHDTQKTQGPRGNQVMLDLSEV*GSEVLA Trigger: TGCCAATACCTCAGAACCCAATACCTCGGACAGATC...TAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCTGTGTATCATGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATAAGAAACAAAACCCTGTaGCGCGGCGGCAGAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RKLKDPEGTKLCYTIYKIRNKTL*RGGRGT Trigger: AGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTCT...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAAAGGCTGTAACAAAGTaGAACCTGCTGTCGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VMPWVYFVRILSQCFQVGKAVTK*NLLSKD Trigger: GTCCTTCGACAGCAGGTTCAACTTTGTTACAGCCTT...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTACAGAACCTGAGTTGTaGCAGAGCTGGCAGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTTEPEL*QSWQQL Trigger: TAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGT...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPQVQSITNEQFCIQVTYVLSAM*FSAGFS Trigger: GGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGTGGCATCCTGGTGTTaGAACTGGCTGCTGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQVASWC*NWLLLV Trigger: TACTAACAGCAGCCAGTTCAAACACCAGGATGCCAC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AACTCCAGTTGTAAGGACTCCGTTTGTGTACTTGATTTAACACTTTTTGGTGTGGGCTTCTTTTCATATTaGCGCTTCGGCCGGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NSSCKDSVCVLDLTLFGVGFFSY*RFGRIR Trigger: TCTTATCCGGCCGAAGCGCAAATATGAAAAGAAGCC...CACACCAAAAAGTGTTAAATCAAGTACACAAACGGAGTCCTTACAACTGGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGGAACTACTATTTGCTaGCTGCTGCTGCTGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQGTTIC*LLLLSL Trigger: CAGACTCAGCAGCAGCAGCAAGCAAATAGTAGTTCC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTGGGGACCTTGGAAACTaGACAATTTGCTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CYTIYKIPRSPQLPNTFTGDLGN*TICCSS Trigger: GCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCCC...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | GTAATGCCCTGGGTTTATTTTGTGAGAATTCTATCACAATGTTTCCAGGTGGGAGATGGGGGTAAGACTTaGGGCTTCTTTTCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMPWVYFVRILSQCFQVGDGGKT*GFFSYL Trigger: CAAATATGAAAAGAAGCCCAAAGTCTTACCCCCATC...TCCCACCTGGAAACATTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPFTKYQGVHSYLTHLLQVLSAM*FSAGFS Trigger: GGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...CTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTTCTTTTAGAAGTAGTTaGGCTTCCTGCAGACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTSFRSS*ASCRLT Trigger: AGTCAGTCTGCAGGAAGCCAAACTACTTCTAAAAGA...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTTCAGCCTTATCTTGCTaGTTAACTTTGAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGSALSC*LTLNSF Trigger: GAAGGAGTTCAAAGTTAACAAGCAAGATAAGGCTGA...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTTTCCAGGTGGGATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGATGGGGGTAAGACTTaGGGCTTCTTTTCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TMFPGGIKNLKDNVCHWTDGGKT*GFFSYL Trigger: CAAATATGAAAAGAAGCCCAAAGTCTTACCCCCATC...AGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAACATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAACCTTAAGGATAACGTATGCCATTGGACTGGGCATTCAGACTTCGGTATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKNLKDNVCHWTGHSDFGIHDFP*ELNLQR Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...ACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | CGCCCCCAAGTGCAAAGCATCACAAATGAACAGTTCTGTATTCAAGTAACATATATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPQVQSITNEQFCIQVTYIHDFP*ELNLQR Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...ATATGTTACTTGAATACAGAACTGTTCATTTGTGATGCTTTGCACTTGGGGGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAACTCAAGGACCCAGAGGGAACCAAGTTATGTTATACCATTTACAAAATATCTTTTAGAAGTAGTTaGGCTTCCTGCAGACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RKLKDPEGTKLCYTIYKISFRSS*ASCRLT Trigger: AGTCAGTCTGCAGGAAGCCAAACTACTTCTAAAAGA...TATTTTGTAAATGGTATAACATAACTTGGTTCCCTCTGGGTCCTTGAGTTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | CAGCACGACCCTTCCACCACGTCCGACCCGTCTTCGTaGAAATCCAAGACACCTCTGGGGTACGGTGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QHDPSTTSDPSS*KSKTPLGYGES Trigger: ACTCTCACCGTACCCCAGAGGTGTCTTGGATTTGCACGAAGACGGGTCGGACGTGGTGGAAGGGTCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 90 bp | AGGACGCCATTCACCCCGAGCCCGAGCACCACATCATCCTTCACCTaGAACCCCAGCAGCTGTTCCGACGTCATCAAAGCAGAAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTPFTPSPSTTSSFT*NPSSCSDVIKAEAA Trigger: TGCTGCTTCTGCTTTGATGACGTCGGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGTGGTGCTCGGGCTCGGGGTGAATGGCGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 72 bp | TCACCCCGAGCCCGAGCACCACATCATCCTTCACCTTaGACCCCAGCAGCTGTTCCGACGTCATCAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPRARAPHHPSP*TPAAVPTSSKQ Trigger: CTGCTTTGATGACGTCGGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGTGGTGCTCGGGCTCGGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | AAAACCCTGTTGCGCGGCGGCAGAGGAACTACTATTTaGTTGCTGCTGCTGCTGAGTCTGCGCAAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KTLLRGGRGTTI*LLLLLSLRKLL Trigger: CAGCAGCTTGCGCAGACTCAGCAGCAGCAGCAAGCAAATAGTAGTTCCTCTGCCGCCGCGCAACAGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 72 bp | TTCACCCCGAGCCCGAGCACCACATCATCCTTCACCTaGAACCCCAGCAGCTGTTCCGACGTCATCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FTPSPSTTSSFT*NPSSCSDVIKA Trigger: TGCTTTGATGACGTCGGAACAGCTGCTGGGGTTCAAGGTGAAGGATGATGTGGTGCTCGGGCTCGGGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 72 bp | ACGTGTGGGCCCCAGGCTGTGCTGCTCCTGCTCGACTaGTACTCCTGTGTAACTTTCTACTGGAGAGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TCGPQAVLLLLD*YSCVTFYWRVH Trigger: GTGAACTCTCCAGTAGAAAGTTACACAGGAGTATCAGTCGAGCAGGAGCAGCACAGCCTGGGGCCCACACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS TCA 72 bp | CTGCTGGTACTGTTCGGCTGTGAATGCACAGTGTGCTaGGCCACTGCTACTTCTGTTCTGGGTGGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLFGCECTVC*ATATSVLGGGA Trigger: AGCACCTCCACCCAGAACAGAAGTAGCAGTGGCTCAGCACACTGTGCATTCACAGCCGAACAGTACCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 72 bp | AGGTGCAGCAGCTCCCGTTTACTCTTCTCCCGTCTCTaGATCATTTCCAGGATGGTGACAGCCCGGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RCSSSRLLFSRL*IISRMVTARLR Trigger: TCTCAGCCGGGCTGTCACCATCCTGGAAATGATCAAGAGACGGGAGAAGAGTAAACGGGAGCTGCTGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | AACCATGTTATCCCGCTTCTCGCCGTACACCTGCTGTaGAGAAATAGCCCGCTGAAGATGGTGTTCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: NHVIPLLAVHLL*RNSPLKMVFRL Trigger: GAGTCGGAACACCATCTTCAGCGGGCTATTTCTGCACAGCAGGTGTACGGCGAGAAGCGGGATAACATGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028100.13 |
||
| CDS TCA 72 bp | GTCCAAATCCAGGTGGTGAAACATACTGTCATAGTCTaGATGCGCTCTGTCCAGCACGACCCTTCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: VQIQVVKHTVIV*MRSVQHDPSTT Trigger: CGTGGTGGAAGGGTCGTGCTGGACAGAGCGCATTCAGACTATGACAGTATGTTTCACCACCTGGATTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 72 bp | AACTCCTTCGAGTCCGTGGCATCCTGGTGTTTGAACTaGCTGCTGTTAGTAATCGGGATGATGGGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NSFESVASWCLN*LLLVIGMMGMA Trigger: TGCCATCCCCATCATCCCGATTACTAACAGCAGCCAGTTCAAACACCAGGATGCCACGGACTCGAAGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 90 bp | AAACTGTGCACTAGCAGAGTCCAACGTCTTAGAAACAAAACCCTGTaGCGCGGCGGCAGAGGAACTACTATTTGCTTGCTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KLCTSRVQRLRNKTL*RGGRGTTICLLLLL Trigger: CAGCAGCAGCAGCAAGCAAATAGTAGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTCTAAGACGTTGGACTCTGCTAGTGCACAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 90 bp | AGGGGACAGTTAATCGGATGTTGTTCCCAAACAGAACCTGAGTTGTaGCAGAGCTGGCAGCAGTTACTTGGTGACTCAGTGAGCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGQLIGCCSQTEPEL*QSWQQLLGDSVSCG Trigger: CCCACAGCTCACTGAGTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAACAACATCCGATTAACTGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | GGGGATGGCATAAGTAGGCTTCACTGGCTGTCTCTGTaGCATGACCTCAGACATGATCTCTCCACTATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDGISRLHWLSL*HDLRHDLSTIV Trigger: GACTATAGTGGAGAGATCATGTCTGAGGTCATGGCACAGAGACAGCCAGTGAAGCCTACTTATGCCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | CTAGCAGAGTCCAACGTCTTAGAAACAAAACCCTGTTaGGCGGCGGCAGAGGAACTACTATTTGCTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAESNVLETKPC*AAAEELLFACC Trigger: GCAGCAAGCAAATAGTAGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTCTAAGACGTTGGACTCTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CCA 72 bp | TGTTGTTCCCAAACAGAACCTGAGTTGTTGCAGAGCTaGCAGCAGTTACTTGGTGACTCAGTGAGCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCSQTEPELLQS*QQLLGDSVSCG Trigger: CCCACAGCTCACTGAGTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS CAA 90 bp | CTGAATCTACAGAGGATGAGGAGGGGACCTTGGAAACTTGACAATTaGCTGCAGCAGCCAGCTTTAAGGCAGATGGCGGAACAGCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: LNLQRMRRGPWKLDN*LQQPALRQMAEQHL Trigger: TAAGTGCTGTTCCGCCATCTGCCTTAAAGCTGGCTGCTGCAGCAAATTGTCAAGTTTCCAAGGTCCCCTCCTCATCCTCTGTAGATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
||
| CDS GCA 72 bp | TCACTGTCAGGCAGGGATGGTGTCCGAGGCCTAAAGTaGCGCCATCTACATGATTTGATATCGACTAGTATC | + |
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Preference number: 6 (lower is better) Translates to: SLSGRDGVRGLK*RHLHDLISTSI Trigger: GATACTAGTCGATATCAAATCATGTAGATGGCGGCACTTTAGGCCTCGGACACCATCCCTGCCTGACAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CAA 72 bp | TTGCGCTTCGGCCGGATAAGATCAGCCTTATCTTGCTaGTTAACTTTGAACTCCTTCGAGTCCGTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LRFGRIRSALSC*LTLNSFESVAS Trigger: GGATGCCACGGACTCGAAGGAGTTCAAAGTTAACAAGCAAGATAAGGCTGATCTTATCCGGCCGAAGCGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CAA 72 bp | ACTAGCAGAGTCCAACGTCTTAGAAACAAAACCCTGTaGCGCGGCGGCAGAGGAACTACTATTTGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSRVQRLRNKTL*RGGRGTTICLL Trigger: CAGCAAGCAAATAGTAGTTCCTCTGCCGCCGCGCAACAGGGTTTTGTTTCTAAGACGTTGGACTCTGCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS GCA 72 bp | AAATTATACCTCTTCTCCATGATTTCCAGGGTCAGGTaGAGCAGCTCCCGTTTACTCTTCTCCCGTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KLYLFSMISRVR*SSSRLLFSRLL Trigger: CAAGAGACGGGAGAAGAGTAAACGGGAGCTGCTGCACCTGACCCTGGAAATCATGGAGAAGAGGTATAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CCA 72 bp | CGTCCGACCCGTCTTCGTGCAAATCCAAGACACCTCTaGGGTACGGTGAGAGTAGTTAAGCAATATCTATAT | + |
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Preference number: 6 (lower is better) Translates to: RPTRLRANPRHL*GTVRVVKQYLY Trigger: ATATAGATATTGCTTAACTACTCTCACCGTACCCCAGAGGTGTCTTGGATTTGCACGAAGACGGGTCGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CAA 72 bp | GCAGATGGGGGTAAGACTTTGGGCTTCTTTTCATATTaGCGCTTCGGCCGGATAAGATCAGCCTTATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ADGGKTLGFFSY*RFGRIRSALSC Trigger: GCAAGATAAGGCTGATCTTATCCGGCCGAAGCGCAAATATGAAAAGAAGCCCAAAGTCTTACCCCCATCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS TCA 72 bp | CTCCACTATAGTCACCTAAATTATACCTCTTCTCCATaGTTTCCAGGGTCAGGTGCAGCAGCTCCCGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LHYSHLNYTSSP*FPGSGAAAPVY Trigger: GTAAACGGGAGCTGCTGCACCTGACCCTGGAAATCATGGAGAAGAGGTATAATTTAGGTGACTATAGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS GCA 72 bp | CTGTTCCGACGTCATCAAAGCAGAAGCAGCAAACTGTaGACTAGCAGAGTCCAACGTCTTAGAAACAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LFRRHQSRSSKL*TSRVQRLRNKT Trigger: GGTTTTGTTTCTAAGACGTTGGACTCTGCTAGTGCACAGTTTGCTGCTTCTGCTTTGATGACGTCGGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CCA 72 bp | GTCCAAGCTAAAAGGCTGTATGTGAATGAGCTGCTTTaGCATCCTGAACTCCCCAGGGTATATGGACTCATA | + |
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Preference number: 6 (lower is better) Translates to: VQAKRLYVNELL*HPELPRVYGLI Trigger: TATGAGTCCATATACCCTGGGGAGTTCAGGATGCCAAAGCAGCTCATTCACATACAGCCTTTTAGCTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CCA 72 bp | TTGTTAACTTTGAACTCCTTCGAGTCCGTGGCATCCTaGTGTTTGAACTGGCTGCTGTTAGTAATCGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LLTLNSFESVAS*CLNWLLLVIGM Trigger: CATCCCGATTACTAACAGCAGCCAGTTCAAACACCAGGATGCCACGGACTCGAAGGAGTTCAAAGTTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CAA 72 bp | ATATTTGCGCTTCGGCCGGATAAGATCAGCCTTATCTaGCTTGTTAACTTTGAACTCCTTCGAGTCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: IFALRPDKISLI*LVNFELLRVRG Trigger: GCCACGGACTCGAAGGAGTTCAAAGTTAACAAGCAAGATAAGGCTGATCTTATCCGGCCGAAGCGCAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS CAA 72 bp | TTAATCGGATGTTGTTCCCAAACAGAACCTGAGTTGTaGCAGAGCTGGCAGCAGTTACTTGGTGACTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LIGCCSQTEPEL*QSWQQLLGDSV Trigger: CACTGAGTCACCAAGTAACTGCTGCCAGCTCTGCAACAACTCAGGTTCTGTTTGGGAACAACATCCGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS TCA 72 bp | GTCTTTAGAGGAAGATCTGTCCGAGGTATTGGGTTCTaGGGTATTGGCAAACTGATTGACTGGAGAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VFRGRSVRGIGF*GIGKLIDWRRL Trigger: CAACCTTCTCCAGTCAATCAGTTTGCCAATACCTCAGAACCCAATACCTCGGACAGATCTTCCTCTAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS GCA 72 bp | CTCCATTGCTACTGTGTTGTCTGCTATGTTGTTCAGTaGTGGCTTTTCCGATTCATGATTTTCCCTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LHCYCVVCYVVQ*WLFRFMIFPWN Trigger: GTTCCAAGGGAAAATCATGAATCGGAAAAGCCAGCACTGAACAACATAGCAGACAACACAGTAGCAATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS GCA 72 bp | AGGGTATATGGACTCATAGTAAGCGATGTTACTCTCTaGTTCAGGAACTGGAATAACCATGTTATCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: RVYGLIVSDVTL*FRNWNNHVIPL Trigger: AAGCGGGATAACATGGTTATTCCAGTTCCTGAAGCAGAGAGTAACATCGCTTACTATGAGTCCATATACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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| CDS GCA 72 bp | CTGCCTTTTTCTAGCCGGTCAATCATCTCCTCAAACTaGAATGGGCAGATGTCCATTTTCTTCTTCAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LPFSSRSIISSN*NGQMSIFFFSL Trigger: TAAACTGAAGAAGAAAATGGACATCTGCCCATTGCAGTTTGAGGAGATGATTGACCGGCTAGAAAAAGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028100.13 ENSMUST00000115870.9 |
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