Pregenerated sensors for EPB42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023216Ensembl transcript IDs: ENSMUST00000023987.6, ENSMUST00000102490.10
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCTACAGGCTGCAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTaGAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAA | + |
Preference number: 1 (lower is better) Translates to: STGCRKRDTGPGLGF*NFKAHPPATHFLQQ Trigger: TTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTGCAGCCTGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 90 bp | TTTTACATCTCAATCTACAGGCTGCAGGAAGAGAGACACTGGGCCTaGCTTGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACA | + |
Preference number: 1 (lower is better) Translates to: FYISIYRLQEERHWA*LGLLKLQSPPTSNT Trigger: TGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTGCAGCCTGTAGATTGAGATGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 90 bp | ACTGCTCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTaGGGTGTGGTGTATGACCTGAATAGAGTCCCCCGAAAACACCAG | + |
Preference number: 1 (lower is better) Translates to: TALEDHMLESRVKLQ*GVVYDLNRVPRKHQ Trigger: CTGGTGTTTTCGGGGGACTCTATTCAGGTCATACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR TCA 90 bp | AAGCTCACCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTaGTGTTTGTGTCTACTACGGAGTTTTGGACACTGGAGTATAGAC | + |
Preference number: 1 (lower is better) Translates to: KLTHAVGFRQEFCKF*CLCLLRSFGHWSID Trigger: GTCTATACTCCAGTGTCCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGGTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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3UTR-3UTR TCA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTTGGGAAAGGCCCAGTaGTGGGAAGAACAGAGACCT | + |
Preference number: 2 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDLGKAQ*WEEQRP Trigger: AGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAA...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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3UTR-3UTR TCA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCTTCTGTGAATCTAGCTaGTTTTTGGCCACTGGTCTG | + |
Preference number: 2 (lower is better) Translates to: QEERHWAWLGLLKLQSPPFCESS*FLATGL Trigger: CAGACCAGTGGCCAAAAATCAGCTAGATTCACAGAA...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR-3UTR TCA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTAATCTGAATGTACTCTaGAAAGGTAGTCAGAACATC | + |
Preference number: 2 (lower is better) Translates to: GAWQHSGRHRPGEVAESFNLNVL*KGSQNI Trigger: GATGTTCTGACTACCTTTTCAGAGTACATTCAGATT...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR-3UTR CCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCTCTACTACGGAGTTTTaGACACTGGAGTATAGACCA | + |
Preference number: 2 (lower is better) Translates to: VLGKGPVMGRTETSFVVVSTTEF*TLEYRP Trigger: TGGTCTATACTCCAGTGTCCAAAACTCCGTAGTAGA...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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3UTR-3UTR CCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTGATACAAATGGATTTTaGAGCCAGGCAGTGGTGGCG | + |
Preference number: 2 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTDTNGF*SQAVVA Trigger: CGCCACCACTGCCTGGCTCCAAAATCCATTTGTATC...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR-3UTR CCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGCTATCCACTCATCTTTaGGTCTTTTACAATAGCCAC | + |
Preference number: 2 (lower is better) Translates to: WAFETSKPTHQQHTSSNKLSTHL*VFYNSH Trigger: GTGGCTATTGTAAAAGACCCAAAGATGAGTGGATAG...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR-3UTR TCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACGGTGACTCCAGTGTATaGCCAAGTTTAAGCAGGATT | + |
Preference number: 2 (lower is better) Translates to: PMQWDFVKSFANSDVCVYGDSSV*PSLSRI Trigger: AATCCTGCTTAAACTTGGTCATACACTGGAGTCACC...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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3UTR-3UTR TCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTTGCCTTAGGTTGGCTTaGTACAAATGGATTTTGGAG | + |
Preference number: 2 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTCLRLA*YKWILE Trigger: CTCCAAAATCCATTTGTATCAAGCCAACCTAAGGCA...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR TCA 72 bp | TGCAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTaGAACTTCAAAGCCCACCCACCAGCAACACACTTC | + |
Preference number: 3 (lower is better) Translates to: CRKRDTGPGLGF*NFKAHPPATHF Trigger: GAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 72 bp | GTTGGCTTGATACAAATGGATTTTGGAGCCAGGCAGTaGTGGCGCACGCCTTTAATCCCAGTACTTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: VGLIQMDFGARQ*WRTPLIPVLGR Trigger: CCTCCCAAGTACTGGGATTAAAGGCGTGCGCCACCACTGCCTGGCTCCAAAATCCATTTGTATCAAGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 72 bp | CTGACTGCCTTAGGTTGGCTTGATACAAATGGATTTTaGAGCCAGGCAGTGGTGGCGCACGCCTTTAATCCC | + |
Preference number: 3 (lower is better) Translates to: LTALGWLDTNGF*SQAVVAHAFNP Trigger: GGGATTAAAGGCGTGCGCCACCACTGCCTGGCTCCAAAATCCATTTGTATCAAGCCAACCTAAGGCAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR-3UTR CAA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGCCACTGGTCTGTTGCTaGGTAGGCAGAATTCCCCTC | + |
Preference number: 3 (lower is better) Translates to: WAFETSKPTHQQHTSSNKPLVCC*VGRIPL Trigger: GAGGGGAATTCTGCCTACCAAGCAACAGACCAGTGG...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR GCA 72 bp | GAAGTAGCTGAGAGTTTTACATCTCAATCTACAGGCTaGAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTT | + |
Preference number: 3 (lower is better) Translates to: EVAESFTSQSTG*RKRDTGPGLGF Trigger: AAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTGCAGCCTGTAGATTGAGATGTAAAACTCTCAGCTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 72 bp | GAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTaGGGTGTGGTGTATGACCTGAATAGAGTCCCCCGA | + |
Preference number: 3 (lower is better) Translates to: EDHMLESRVKLQ*GVVYDLNRVPR Trigger: TCGGGGGACTCTATTCAGGTCATACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR GCA 72 bp | TCTGTGAATCTAGCTGATTTTTGGCCACTGGTCTGTTaGTTGGTAGGCAGAATTCCCCTCTGGAGCATGTCT | + |
Preference number: 3 (lower is better) Translates to: SVNLADFWPLVC*LVGRIPLWSMS Trigger: AGACATGCTCCAGAGGGGAATTCTGCCTACCAAGCAACAGACCAGTGGCCAAAAATCAGCTAGATTCACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR TCA 72 bp | AAGACAAATAGTGTTTCTGACTGCCTTAGGTTGGCTTaGTACAAATGGATTTTGGAGCCAGGCAGTGGTGGC | + |
Preference number: 3 (lower is better) Translates to: KTNSVSDCLRLA*YKWILEPGSGG Trigger: GCCACCACTGCCTGGCTCCAAAATCCATTTGTATCAAGCCAACCTAAGGCAGTCAGAAACACTATTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 72 bp | AAATGGATTTTGGTTTCTGTGAATCTAGCTGATTTTTaGCCACTGGTCTGTTGCTTGGTAGGCAGAATTCCC | + |
Preference number: 3 (lower is better) Translates to: KWILVSVNLADF*PLVCCLVGRIP Trigger: GGGAATTCTGCCTACCAAGCAACAGACCAGTGGCCAAAAATCAGCTAGATTCACAGAAACCAAAATCCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CCA 72 bp | AGTCTAAGACAAATAGTGTTTCTGACTGCCTTAGGTTaGCTTGATACAAATGGATTTTGGAGCCAGGCAGTG | + |
Preference number: 3 (lower is better) Translates to: SLRQIVFLTALG*LDTNGFWSQAV Trigger: CACTGCCTGGCTCCAAAATCCATTTGTATCAAGCCAACCTAAGGCAGTCAGAAACACTATTTGTCTTAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR TCA 72 bp | ATGAAACATCTGAACACCCCAAATCTGAATGTACTCTaGAAAGGTAGTCAGAACATCTCATTATACTTTGAG | + |
Preference number: 3 (lower is better) Translates to: MKHLNTPNLNVL*KGSQNISLYFE Trigger: CTCAAAGTATAATGAGATGTTCTGACTACCTTTTCAGAGTACATTCAGATTTGGGGTGTTCAGATGTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR TCA 72 bp | GAACAACAGTTCTCAACCATGGATTTCGAAACCCTTTaGTGGTCACATATCATATATCCTGAATATCAGATA | + |
Preference number: 3 (lower is better) Translates to: EQQFSTMDFETL*WSHIIYPEYQI Trigger: TATCTGATATTCAGGATATATGATATGTGACCATCAAAGGGTTTCGAAATCCATGGTTGAGAACTGTTGTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCGCCACTGCCTCAGGATaGGCACGCTGCCCCGACGTT | + |
Preference number: 4 (lower is better) Translates to: QEERHWAWLGLLKLQSPPATASG*ARCPDV Trigger: AACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGC...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTCTCGTCCTTGGCCAGTaGGCCACTGCCTCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: GAWQHSGRHRPGEVAESFLVLGQ*ATASGW Trigger: CCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAG...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCCGACTCGAGCTGGGATaGCCAGGCACCGTAGCACTG | + |
Preference number: 4 (lower is better) Translates to: GPVMGRTETSFVVVPWMSRLELG*PGTVAL Trigger: CAGTGCTACGGTGCCTGGGCATCCCAGCTCGAGTCG...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACGCCACTGCCTCAGGATaGGCACGCTGCCCCGACGTT | + |
Preference number: 4 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDATASG*ARCPDV Trigger: AACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGC...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCGGCAGCCTGGGTCTGTaGAATAGGCAGGACACTCTT | + |
Preference number: 4 (lower is better) Translates to: QEERHWAWLGLLKLQSPPGSLGL*NRQDTL Trigger: AAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCC...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCTCGTCCTTGGCCAGTaGGCCACTGCCTCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVLVLGQ*ATASGW Trigger: CCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAG...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCCGACTCGAGCTGGGATaGCCAGGCACCGTAGCACTG | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSRLELG*PGTVAL Trigger: CAGTGCTACGGTGCCTGGGCATCCCAGCTCGAGTCG...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCGCCCCAATCACCAGGTaGACCTTCTTCTCCTCGTCT | + |
Preference number: 4 (lower is better) Translates to: QEERHWAWLGLLKLQSPPAPITR*TFFSSS Trigger: AGACGAGGAGAAGAAGGTGCACCTGGTGATTGGGGC...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCTCCCAGGGCTCTTCCTaGATGCAGTCAGCTGTGCCC | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVSQGSS*MQSAVP Trigger: GGGCACAGCTGACTGCATTCAGGAAGAGCCCTGGGA...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | CATGCTAATTCACGCTGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACTGTGGATCATCTGGGTaGAGACTGCCCAGCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: HANSRCAWERPSDGKNRDCGSSG*RLPSLD Trigger: GTCCAGGCTGGGCAGTCTGCACCCAGATGATCCACA...GTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACAGCGTGAATTAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACCCTTCCTGGGCAGCCTaGGTCTGTGAAATAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDPSWAA*VCEIGR Trigger: CCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGG...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTTCCACAGTGAGCCTTTaGAGCCCCAGATGTGTTGGG | + |
Preference number: 4 (lower is better) Translates to: GAWQHSGRHRPGEVAESFSTVSL*SPRCVG Trigger: CCCAACACATCTGGGGCTCCAAAGGCTCACTGTGGA...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGAGGGCTCTTCCTGAATaGAGTCAGCTGTGCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDERALPE*SQLCPG Trigger: ACCTGGGCACAGCTGACTGCATTCAGGAAGAGCCCT...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCTTAGGAGCCCTTGGGTaGAGAATCTGCCATCCACCA | + |
Preference number: 4 (lower is better) Translates to: GPVMGRTETSFVVVPWMSLGALG*RICHPP Trigger: TGGTGGATGGCAGATTCTGCACCCAAGGGCTCCTAA...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | CATGCTAATTCACGCTGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACAAAGAGCTCTGGTACTaGGGGGTCCAGCTGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: HANSRCAWERPSDGKNRDKELWY*GVQLQF Trigger: GAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTT...GTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACAGCGTGAATTAGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTCTCAAAGTAAGGTGCTaGGAGCTGATGGCCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: GAWQHSGRHRPGEVAESFLKVRC*ELMALV Trigger: CACCAAGGCCATCAGCTCCCAGCACCTTACTTTGAG...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCTGGAAGACCCAGATATaGCCCCTCTGTCCTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: GPVMGRTETSFVVVPWMSWKTQI*PLCPSP Trigger: TGGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCA...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGTCCATTAGGAGCCCTTaGGTGCAGAATCTGCCATCC | + |
Preference number: 4 (lower is better) Translates to: GKGPVMGRTETSFVVVPWSIRSP*VQNLPS Trigger: GGATGGCAGATTCTGCACCCAAGGGCTCCTAATGGA...CCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGCAGCTGAGGCTGGTGTaGGAGTACCTTGCCATTGCC | + |
Preference number: 4 (lower is better) Translates to: WAFETSKPTHQQHTSSNKQLRLV*EYLAIA Trigger: GGCAATGGCAAGGTACTCCCACACCAGCCTCAGCTG...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | CCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTGGAAGTCACAGCTCTTaGTGCTCAGAGCTTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: PLLPRQQNSALLSMTYKTGSHSS*CSELAP Trigger: TGGGGCAAGCTCTGAGCATCAAGAGCTGTGACTTCC...AGTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCGGAAGTCACAGCTCTTaGTGCTCAGAGCTTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSGSHSS*CSELAP Trigger: TGGGGCAAGCTCTGAGCATCAAGAGCTGTGACTTCC...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCAAGGTCACTGAGAGCTaGCCATCTCCACTCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVKVTES*PSPLRG Trigger: CCCTCTGAGTGGAGATGGTCAGCTCTCAGTGACCTT...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCTCCTCAAAGTAAGGTaGTGGGAGCTGATGGCCTTG | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDELLKVR*WELMAL Trigger: CAAGGCCATCAGCTCCCAGCACCTTACTTTGAGGAG...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGAGGGCTCTTCCTGAATaGAGTCAGCTGTGCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: WAFETSKPTHQQHTSSNKRALPE*SQLCPG Trigger: ACCTGGGCACAGCTGACTGCATTCAGGAAGAGCCCT...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCTCAGGATGGGCACGCTaGCCCGACGTTTGTACAACA | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVSGWAR*PDVCTT Trigger: TGTTGTACAAACGTCGGGGCAGCGTGCCCATCCTGA...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCTCAGGATGGGCACGCTaGCCCGACGTTTGTACAACA | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSSGWAR*PDVCTT Trigger: TGTTGTACAAACGTCGGGGCAGCGTGCCCATCCTGA...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTGGCACCGTAGCACTGTaGAAGCAACAGCAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: PLLPRQQNSALLSMTYKTGTVAL*KQQQQT Trigger: TGTCTGCTGCTGTTGCTTGCACAGTGCTACGGTGCC...AGTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTTAGGAGCCCTTGGGTaGAGAATCTGCCATCCACCA | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSLGALG*RICHPP Trigger: TGGTGGATGGCAGATTCTGCACCCAAGGGCTCCTAA...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGCAGAAATGTGTGGGTTaGAGCACGGAAGTTCAGGGT | + |
Preference number: 4 (lower is better) Translates to: GKGPVMGRTETSFVVVPWQKCVG*STEVQG Trigger: ACCCTGAACTTCCGTGCTCCAACCCACACATTTCTG...CCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | CATGCTAATTCACGCTGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACGAGACGGTCCAGTGTTaGGCATCTCTTTCCTCCACT | + |
Preference number: 4 (lower is better) Translates to: HANSRCAWERPSDGKNRDETVQC*ASLSST Trigger: AGTGGAGGAAAGAGATGCCCAACACTGGACCGTCTC...GTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACAGCGTGAATTAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTCCATTAGGAGCCCTTaGGTGCAGAATCTGCCATCC | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSSIRSP*VQNLPS Trigger: GGATGGCAGATTCTGCACCCAAGGGCTCCTAATGGA...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGCTTGACTGCTCTGACTaGGACCAGACTGCAGGATCC | + |
Preference number: 4 (lower is better) Translates to: WAFETSKPTHQQHTSSNKLDCSD*DQTAGS Trigger: GGATCCTGCAGTCTGGTCCCAGTCAGAGCAGTCAAG...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTTGGCTTGGGTCTTATTaGTCTTGGAAGGTTGCTCTC | + |
Preference number: 4 (lower is better) Translates to: GAWQHSGRHRPGEVAESFWLGSY*SWKVAL Trigger: GAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCA...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCAATCTACTTCCACAGTaGGCCTTTGGAGCCCCAGAT | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSNLLPQ*AFGAPD Trigger: ATCTGGGGCTCCAAAGGCTCACTGTGGAAGTAGATT...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACCTCCTCGTTGTTTTCTaGTGCGTGGAAGTCACAGCT | + |
Preference number: 4 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDLLVVF*CVEVTA Trigger: AGCTGTGACTTCCACGCAGCAGAAAACAACGAGGAG...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTTCTTCTTGAGGGCATaGAACAAGGCGCCCACAACT | + |
Preference number: 4 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDFFLRA*NKAPTT Trigger: AGTTGTGGGCGCCTTGTTGCATGCCCTCAAGAAGAA...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACCATCTGGGTGCAGACTaGCCAGCCTGGACAAGGGGC | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYHLGAD*PAWTRG Trigger: GCCCCTTGTCCAGGCTGGGCAGTCTGCACCCAGATG...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCTCAAAGTAAGGTGCTaGGAGCTGATGGCCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVLKVRC*ELMALV Trigger: CACCAAGGCCATCAGCTCCCAGCACCTTACTTTGAG...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGGCACTCCACCCTTTTTaGTCCCCAAGAGAGGAAATT | + |
Preference number: 4 (lower is better) Translates to: GKGPVMGRTETSFVVVPWALHPF*SPREEI Trigger: AATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGC...CCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTACCTTCCTGGGCAGCCTaGGTCTGTGAAATAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVPSWAA*VCEIGR Trigger: CCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGG...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | CCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTAACCTGAAGCAAGAGTaGGTAGTGGCCAATGACAGC | + |
Preference number: 4 (lower is better) Translates to: PLLPRQQNSALLSMTYKTNLKQE*VVANDS Trigger: GCTGTCATTGGCCACTACTCACTCTTGCTTCAGGTT...AGTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTTCCCAGGGCTCTTCCTaGATGCAGTCAGCTGTGCCC | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTSQGSS*MQSAVP Trigger: GGGCACAGCTGACTGCATTCAGGAAGAGCCCTGGGA...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCCTCGTTGTTTTCTGCTaGGTGGAAGTCACAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSLVVFC*VEVTAL Trigger: AAGAGCTGTGACTTCCACGCAGCAGAAAACAACGAG...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTAGGCACCGTAGCACTGTaGAAGCAACAGCAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVGTVAL*KQQQQT Trigger: TGTCTGCTGCTGTTGCTTGCACAGTGCTACGGTGCC...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTATTCCCCCTCCTTGACTaGTCTGACTGGGACCAGACT | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVFPLLD*SDWDQT Trigger: AGTCTGGTCCCAGTCAGAGCAGTCAAGGAGGGGGAA...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTCGAGGCATTTACTGCTaGAAAGAGCTCTGGTACTGC | + |
Preference number: 4 (lower is better) Translates to: PLLPRQQNSALLSMTYKTRGIYC*KELWYC Trigger: GCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCG...AGTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCCGAGGCATTTACTGCTaGAAAGAGCTCTGGTACTGC | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSRGIYC*KELWYC Trigger: GCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCG...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTGTCGGTCTCCCCAAATaGTTTCTTACGACAGGGTGG | + |
Preference number: 4 (lower is better) Translates to: CAWERPSDGKNRDLICCSVGLPK*FLTTGW Trigger: CCACCCTGTCGTAAGAAAGCATTTGGGGAGACCGAC...ACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCCCCAAGAGAGGAAATTaGGAAGATGGCTTGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSPKRGN*EDGLGL Trigger: AAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGG...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GATCTACAGAGTGAGTTCCTGGACCAACAGCACTACATAGAGAAACCCTGTCTCGAGACGGTCCAGTGTTaGGCATCTCTTTCCTCCACT | + |
Preference number: 4 (lower is better) Translates to: DLQSEFLDQQHYIEKPCLETVQC*ASLSST Trigger: AGTGGAGGAAAGAGATGCCCAACACTGGACCGTCTC...GAGACAGGGTTTCTCTATGTAGTGCTGTTGGTCCAGGAACTCACTCTGTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCAAAGCTGTTCTCGGGTaGGGTTTGCTCAAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSKAVLG*GLLKTG Trigger: TCCTGTTTTGAGCAAACCCCACCCGAGAACAGCTTT...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGAGTACCTCCTTTTCTTaGAGAGATCCTGCAGGATAC | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDESTSFS*RDPAGY Trigger: GTATCCTGCAGGATCTCTTCAAGAAAAGGAGGTACT...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCCCAGATGTGTTGGGGTaGACTGGAACTGAGTATGTA | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSPDVLG*TGTEYV Trigger: TACATACTCAGTTCCAGTTCACCCCAACACATCTGG...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTTCTTTCCTCCACTGCTaGACTCCACCCTTTTTGGTC | + |
Preference number: 4 (lower is better) Translates to: CAWERPSDGKNRDLICCSSFLHC*TPPFLV Trigger: GACCAAAAAGGGTGGAGTGCAGCAGTGGAGGAAAGA...ACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | GATCTACAGAGTGAGTTCCTGGACCAACAGCACTACATAGAGAAACCCTGTCTCTTCTCGGGTGGGGTTTaGTCAAAACAGGAGAAGGAC | + |
Preference number: 4 (lower is better) Translates to: DLQSEFLDQQHYIEKPCLFSGGV*SKQEKD Trigger: GTCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAA...GAGACAGGGTTTCTCTATGTAGTGCTGTTGGTCCAGGAACTCACTCTGTAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGTTGTTTTCTGCTGCGTaGAAGTCACAGCTCTTGATG | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDELFSAA*KSQLLM Trigger: CATCAAGAGCTGTGACTTCCACGCAGCAGAAAACAA...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGGCACTCCACCCTTTTTaGTCCCCAAGAGAGGAAATT | + |
Preference number: 4 (lower is better) Translates to: WAFETSKPTHQQHTSSNKALHPF*SPREEI Trigger: AATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGC...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTATGGAAGACCCAGATATaGCCCCTCTGTCCTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVWKTQI*PLCPSP Trigger: TGGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCA...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCCTTTTCTGTTGGAGTTaGTCAACTCCAACTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: GPVMGRTETSFVVVPWMSLFCWS*STPTSH Trigger: ATGGGAAGTTGGAGTTGACCAACTCCAACAGAAAAG...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCCTGTGCTGCTCTCTTTaGCATCTCGATGATAAGATC | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSLCCSL*HLDDKI Trigger: GATCTTATCATCGAGATGCCAAAGAGAGCAGCACAG...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTAGAGCCCCAGATGTGTTaGGGTGAACTGGAACTGAGT | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVEPQMC*GELELS Trigger: ACTCAGTTCCAGTTCACCCCAACACATCTGGGGCTC...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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3UTR CAA 72 bp | GTGAATCTAGCTGATTTTTGGCCACTGGTCTGTTGCTaGGTAGGCAGAATTCCCCTCTGGAGCATGTCTAGT | + |
Preference number: 4 (lower is better) Translates to: VNLADFWPLVCC*VGRIPLWSMSS Trigger: ACTAGACATGCTCCAGAGGGGAATTCTGCCTACCAAGCAACAGACCAGTGGCCAAAAATCAGCTAGATTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACGGCAGCCTGGGTCTGTaGAATAGGCAGGACACTCTT | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYGSLGL*NRQDTL Trigger: AAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCC...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTAAGGTCACTGAGAGCTaGCCATCTCCACTCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTKVTES*PSPLRG Trigger: CCCTCTGAGTGGAGATGGTCAGCTCTCAGTGACCTT...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTACTCCTCGTTGTTTTCTaGTGCGTGGAAGTCACAGCT | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVLLVVF*CVEVTA Trigger: AGCTGTGACTTCCACGCAGCAGAAAACAACGAGGAG...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTCAACACATATTCTGTaGGTTCAGCCTCGTTCTGTA | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSSTHIL*VQPRSV Trigger: TACAGAACGAGGCTGAACGCACAGAATATGTGTTGA...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTATTCTTCTTGAGGGCATaGAACAAGGCGCCCACAACT | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVFFLRA*NKAPTT Trigger: AGTTGTGGGCGCCTTGTTGCATGCCCTCAAGAAGAA...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACGCCCCAATCACCAGGTaGACCTTCTTCTCCTCGTCT | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYAPITR*TFFSSS Trigger: AGACGAGGAGAAGAAGGTGCACCTGGTGATTGGGGC...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCTTGAGCATGAACAACTaGTTCTTGCTCCAGAGACCA | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSLSMNN*FLLQRP Trigger: TGGTCTCTGGAGCAAGAAGCAGTTGTTCATGCTCAA...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGACACTGGAGTATTACACGGCTCGTCCTTaGCCAGTGAGCCACTGCCTC | + |
Preference number: 4 (lower is better) Translates to: VLQILMFVSTTEFWTLEYYTARP*PVSHCL Trigger: GAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTA...ATACTCCAGTGTCCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCCTTTTCTGTTGGAGTTaGTCAACTCCAACTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: RGRWISEFKASVIYRVSSLFCWS*STPTSH Trigger: ATGGGAAGTTGGAGTTGACCAACTCCAACAGAAAAG...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCCACATCTTTTCTGTTaGAGTTGGTCAACTCCAACT | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDEPHLFC*SWSTPT Trigger: AGTTGGAGTTGACCAACTCCAACAGAAAAGATGTGG...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGTCTGTCTGGAATGCTTaGTACATTTTTCTAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: RPSDGKNRDLICCSPVDESVWNA*YIFLAG Trigger: GCCAGCTAGAAAAATGTACCAAGCATTCCAGACAGA...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTAACTTGTAGTTCTGAGTaGTGTCTTCACAGCGGTCAC | + |
Preference number: 4 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVTCSSE*CLHSGH Trigger: GTGACCGCTGTGAAGACATCACTCAGAACTACAAGT...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCTCCCTCTGTCTGGAATaGTTGGTACATTTTTCTAGC | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVSLCLE*LVHFSS Trigger: GCTAGAAAAATGTACCAAGCATTCCAGACAGAGGGA...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GATCTACAGAGTGAGTTCCTGGACCAACAGCACTACATAGAGAAACCCTGTCTCTTGTTTTCTGCTGCGTaGAAGTCACAGCTCTTGATG | + |
Preference number: 4 (lower is better) Translates to: DLQSEFLDQQHYIEKPCLLFSAA*KSQLLM Trigger: CATCAAGAGCTGTGACTTCCACGCAGCAGAAAACAA...GAGACAGGGTTTCTCTATGTAGTGCTGTTGGTCCAGGAACTCACTCTGTAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | ATAGAGAAACCCTGTCTCAAAAATACCAACCAACCAACCAACCAAATAACCAAATACACGGCTCGTCCTTaGCCAGTGAGCCACTGCCTC | + |
Preference number: 4 (lower is better) Translates to: IEKPCLKNTNQPTNQITKYTARP*PVSHCL Trigger: GAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTA...TTTGGTTATTTGGTTGGTTGGTTGGTTGGTATTTTTGAGACAGGGTTTCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | AATGCAAAGTTTTTACTAGCCCACTGTTACCCAGACAACAAAACTCAGCCCTCCCTCGTTGTTTTCTGCTaGGTGGAAGTCACAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: NAKFLLAHCYPDNKTQPSLVVFC*VEVTAL Trigger: AAGAGCTGTGACTTCCACGCAGCAGAAAACAACGAG...GGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGGCTAGTAAAAACTTTGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTTCTTTCCTCCACTGCTaGACTCCACCCTTTTTGGTC | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTSFLHC*TPPFLV Trigger: GACCAAAAAGGGTGGAGTGCAGCAGTGGAGGAAAGA...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | GTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCATTGGGAAGATGGCTTaGGTCTTATTGATCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: VLGKGPVMGRTETSFVVVIGKMA*VLLILE Trigger: TTCCAAGATCAATAAGACCCAAGCCATCTTCCCAAT...GACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | GATCTACAGAGTGAGTTCCTGGACCAACAGCACTACATAGAGAAACCCTGTCTCCCACATCTTTTCTGTTaGAGTTGGTCAACTCCAACT | + |
Preference number: 4 (lower is better) Translates to: DLQSEFLDQQHYIEKPCLPHLFC*SWSTPT Trigger: AGTTGGAGTTGACCAACTCCAACAGAAAAGATGTGG...GAGACAGGGTTTCTCTATGTAGTGCTGTTGGTCCAGGAACTCACTCTGTAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGTTCAGTCTTTCTTTTTaGACTTTCTCCAGTACCTCC | + |
Preference number: 4 (lower is better) Translates to: WAFETSKPTHQQHTSSNKFSLSF*TFSSTS Trigger: GGAGGTACTGGAGAAAGTCCAAAAAGAAAGACTGAA...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTGGCTTGGGTCTTATTaGTCTTGGAAGGTTGCTCTC | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYWLGSY*SWKVAL Trigger: GAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCA...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGGTGAGTAGTGGCCAATaGCAGCATCCACAGGTGTGG | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWVSSGQ*QHPQVW Trigger: CCACACCTGTGGATGCTGTCATTGGCCACTACTCAC...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACACTTGTAGTTCTGAGTaGTGTCTTCACAGCGGTCAC | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYTCSSE*CLHSGH Trigger: GTGACCGCTGTGAAGACATCACTCAGAACTACAAGT...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGTTCCCCCTCCTTGACTaGTCTGACTGGGACCAGACT | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWFPLLD*SDWDQT Trigger: AGTCTGGTCCCAGTCAGAGCAGTCAAGGAGGGGGAA...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATAGAGAAACCCTGTCTCAAAAATACCAACCAACCAACCAACCAAATAACCAAAAAAGAGCTCTGGTACTaGGGGGTCCAGCTGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: IEKPCLKNTNQPTNQITKKELWY*GVQLQF Trigger: GAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTT...TTTGGTTATTTGGTTGGTTGGTTGGTTGGTATTTTTGAGACAGGGTTTCTCTAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCATCATCTCTGTTCCATaGATTAAAGAGCAGTGTGAA | + |
Preference number: 4 (lower is better) Translates to: ISEFKASVIYRVSSWTNSIISVP*IKEQCE Trigger: TTCACACTGCTCTTTAATCCATGGAACAGAGATGAT...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGCTTGACTGCTCTGACTaGGACCAGACTGCAGGATCC | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWLDCSD*DQTAGS Trigger: GGATCCTGCAGTCTGGTCCCAGTCAGAGCAGTCAAG...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTAGAAGGACAGGTTGGTaGATAGTCTCATCACCTGGT | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTRRTGW*IVSSPG Trigger: ACCAGGTGATGAGACTATCCACCAACCTGTCCTTCT...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR TCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTAGTACCTCCTTTTCTTaGAGAGATCCTGCAGGATAC | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTSTSFS*RDPAGY Trigger: GTATCCTGCAGGATCTCTTCAAGAAAAGGAGGTACT...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR GCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTTGAGCATGAACAACTaGTTCTTGCTCCAGAGACCA | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYLSMNN*FLLQRP Trigger: TGGTCTCTGGAGCAAGAAGCAGTTGTTCATGCTCAA...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR TCA 90 bp | ATAGAGAAACCCTGTCTCAAAAATACCAACCAACCAACCAACCAAATAACCAAAAACCTGAAGCAAGAGTaGGTAGTGGCCAATGACAGC | + |
Preference number: 4 (lower is better) Translates to: IEKPCLKNTNQPTNQITKNLKQE*VVANDS Trigger: GCTGTCATTGGCCACTACTCACTCTTGCTTCAGGTT...TTTGGTTATTTGGTTGGTTGGTTGGTTGGTATTTTTGAGACAGGGTTTCTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTATTGGGAAGATGGCTTaGGTCTTATTGATCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTIGKMA*VLLILE Trigger: TTCCAAGATCAATAAGACCCAAGCCATCTTCCCAAT...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGCCCAAGAGAGGAAATTaGGAAGATGGCTTGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWPKRGN*EDGLGL Trigger: AAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGG...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | AATGCAAAGTTTTTACTAGCCCACTGTTACCCAGACAACAAAACTCAGCCCTCCATCATCTCTGTTCCATaGATTAAAGAGCAGTGTGAA | + |
Preference number: 4 (lower is better) Translates to: NAKFLLAHCYPDNKTQPSIISVP*IKEQCE Trigger: TTCACACTGCTCTTTAATCCATGGAACAGAGATGAT...GGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGGCTAGTAAAAACTTTGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACCATCTTCCCTCTGTCTaGAATGCTTGGTACATTTTT | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYHLPSV*NAWYIF Trigger: AAAAATGTACCAAGCATTCCAGACAGAGGGAAGATG...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGTTGCTCTCCCGTTTGTaGAATGAGAGCCACTTTCTT | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWLLSRL*NESHFL Trigger: AAGAAAGTGGCTCTCATTGCACAAACGGGAGAGCAA...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATAGAGAAACCCTGTCTCAAAAATACCAACCAACCAACCAACCAAATAACCAAATTGCTCTCCCGTTTGTaGAATGAGAGCCACTTTCTT | + |
Preference number: 4 (lower is better) Translates to: IEKPCLKNTNQPTNQITKLLSRL*NESHFL Trigger: AAGAAAGTGGCTCTCATTGCACAAACGGGAGAGCAA...TTTGGTTATTTGGTTGGTTGGTTGGTTGGTATTTTTGAGACAGGGTTTCTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CCA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACGTACATTTTTCTAGCTaGCCCTTCTTCATTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: PMQWDFVKSFANSDVCVYVHFSS*PFFILQ Trigger: TTGAAGAATGAAGAAGGGCCAGCTAGAAAAATGTAC...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR GCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGTCAACACATATTCTGTaGGTTCAGCCTCGTTCTGTA | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWSTHIL*VQPRSV Trigger: TACAGAACGAGGCTGAACGCACAGAATATGTGTTGA...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CCA 90 bp | ATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGTTCAGTCTTTCTTTTTaGACTTTCTCCAGTACCTCC | + |
Preference number: 4 (lower is better) Translates to: ISSRVLQILMFVSTTEFWFSLSF*TFSSTS Trigger: GGAGGTACTGGAGAAAGTCCAAAAAGAAAGACTGAA...CCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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3UTR CAA 72 bp | TTTAGGGAATTTCTCAGTCAAACCACCACAGCTCATTaGTTAGCTTTGTCCACTTTATTAAGAAGATTTGTT | + |
Preference number: 4 (lower is better) Translates to: FREFLSQTTTAH*LALSTLLRRFV Trigger: AACAAATCTTCTTAATAAAGTGGACAAAGCTAACAAATGAGCTGTGGTGGTTTGACTGAGAAATTCCCTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CCA 90 bp | ACAGCAGCAGACACCCACGCCTGGGTCTCATACACGGCTCGTCCTTaGCCAGTGAGCCACTGCCTCAGGATGGGCACGCTGCCCCGACGT | + |
Preference number: 5 (lower is better) Translates to: TAADTHAWVSYTARP*PVSHCLRMGTLPRR Trigger: ACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGTGGGTGTCTGCTGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS TCA 90 bp | CAGACACCCACGCCTGGGTCTCATACACGGCTCGTCCTTGGCCAGTaGGCCACTGCCTCAGGATGGGCACGCTGCCCCGACGTTTGTACA | + |
Preference number: 5 (lower is better) Translates to: QTPTPGSHTRLVLGQ*ATASGWARCPDVCT Trigger: TGTACAAACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGTGGGTGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | GCCTGGGTCTGTGAAATAGGCAGGACACTCTTCTTCTTGAGGGCATaGAACAAGGCGCCCACAACTCGGGCCACGTGTGCAGGCTGGTTC | + |
Preference number: 5 (lower is better) Translates to: AWVCEIGRTLFFLRA*NKAPTTRATCAGWF Trigger: GAACCAGCCTGCACACGTGGCCCGAGTTGTGGGCGCCTTGTTGCATGCCCTCAAGAAGAAGAGTGTCCTGCCTATTTCACAGACCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | GAGGCATTTACTGCTGCAAAGAGCTCTGGTACTGCGGGGTCCAGCTaGAGTTCCCCCTCCTTGACTGCTCTGACTGGGACCAGACTGCAG | + |
Preference number: 5 (lower is better) Translates to: EAFTAAKSSGTAGSS*SSPSLTALTGTRLQ Trigger: CTGCAGTCTGGTCCCAGTCAGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | CCAGACCACACACGAGGCATTTACTGCTGCAAAGAGCTCTGGTACTaGGGGGTCCAGCTGCAGTTCCCCCTCCTTGACTGCTCTGACTGG | + |
Preference number: 5 (lower is better) Translates to: PDHTRGIYCCKELWY*GVQLQFPLLDCSDW Trigger: CCAGTCAGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | CCCATCCTCACAGCACTTCCAGACCACACACGAGGCATTTACTGCTaGAAAGAGCTCTGGTACTGCGGGGTCCAGCTGCAGTTCCCCCTC | + |
Preference number: 5 (lower is better) Translates to: PILTALPDHTRGIYC*KELWYCGVQLQFPL Trigger: GAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGGAAGTGCTGTGAGGATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | CTTCCCATCCTCACAGCACTTCCAGACCACACACGAGGCATTTACTaGTGCAAAGAGCTCTGGTACTGCGGGGTCCAGCTGCAGTTCCCC | + |
Preference number: 5 (lower is better) Translates to: LPILTALPDHTRGIY*CKELWYCGVQLQFP Trigger: GGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGGAAGTGCTGTGAGGATGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 90 bp | GCACTTCCAGACCACACACGAGGCATTTACTGCTGCAAAGAGCTCTaGTACTGCGGGGTCCAGCTGCAGTTCCCCCTCCTTGACTGCTCT | + |
Preference number: 5 (lower is better) Translates to: ALPDHTRGIYCCKEL*YCGVQLQFPLLDCS Trigger: AGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGGAAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCATACACGGCTCGTCCTaGGCCAGTGAGCCACTGCCT | + |
Preference number: 5 (lower is better) Translates to: QEERHWAWLGLLKLQSPPIHGSS*ASEPLP Trigger: AGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTAT...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 90 bp | TTCCTGGGCAAAGCAGCTGAGGCTGGTGTGGGAGTACCTTGCCATTaGCGTGACTCGGAGAAAGCTGTTCTCGGGTGGGGTTTGCTCAAA | + |
Preference number: 5 (lower is better) Translates to: FLGKAAEAGVGVPCH*RDSEKAVLGWGLLK Trigger: TTTGAGCAAACCCCACCCGAGAACAGCTTTCTCCGAGTCACGGCAATGGCAAGGTACTCCCACACCAGCCTCAGCTGCTTTGCCCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CCA 90 bp | ACGCTGCCCCGACGTTTGTACAACAAGGCACCTTCCTGGGCAGCCTaGGTCTGTGAAATAGGCAGGACACTCTTCTTCTTGAGGGCATGC | + |
Preference number: 5 (lower is better) Translates to: TLPRRLYNKAPSWAA*VCEIGRTLFFLRAC Trigger: GCATGCCCTCAAGAAGAAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTACAAACGTCGGGGCAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 90 bp | GTGCTGGGAGCTGATGGCCTTGGTGTAGTGCTCCTCGTTGTTTTCTaGTGCGTGGAAGTCACAGCTCTTGATGCTCAGAGCTTGCCCCAT | + |
Preference number: 5 (lower is better) Translates to: VLGADGLGVVLLVVF*CVEVTALDAQSLPH Trigger: ATGGGGCAAGCTCTGAGCATCAAGAGCTGTGACTTCCACGCAGCAGAAAACAACGAGGAGCACTACACCAAGGCCATCAGCTCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 90 bp | CCAATGACAGCATCCACAGGTGTGGTCACAGAGACGGTCCAGTGTTaGGCATCTCTTTCCTCCACTGCTGCACTCCACCCTTTTTGGTCC | + |
Preference number: 5 (lower is better) Translates to: PMTASTGVVTETVQC*ASLSSTAALHPFWS Trigger: GGACCAAAAAGGGTGGAGTGCAGCAGTGGAGGAAAGAGATGCCCAACACTGGACCGTCTCTGTGACCACACCTGTGGATGCTGTCATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | CAGGAAGAGAGACACTGGGCCTGGCTTGGGCTTTTGAAACTTCAAAGCCCACCCAGAGACGGTCCAGTGTaGGGCATCTCTTTCCTCCAC | + |
Preference number: 5 (lower is better) Translates to: QEERHWAWLGLLKLQSPPRDGPV*GISFLH Trigger: GTGGAGGAAAGAGATGCCCAACACTGGACCGTCTCT...GGGTGGGCTTTGAAGTTTCAAAAGCCCAAGCCAGGCCCAGTGTCTCTCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCACGCTGCCCCGACGTTaGTACAACAAGGCACCTTCC | + |
Preference number: 5 (lower is better) Translates to: GPVMGRTETSFVVVPWMSTLPRR*YNKAPS Trigger: GGAAGGTGCCTTGTTGTACAAACGTCGGGGCAGCGT...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS TCA 90 bp | CCGACGTTTGTACAACAAGGCACCTTCCTGGGCAGCCTGGGTCTGTaGAATAGGCAGGACACTCTTCTTCTTGAGGGCATGCAACAAGGC | + |
Preference number: 5 (lower is better) Translates to: PTFVQQGTFLGSLGL*NRQDTLLLEGMQQG Trigger: GCCTTGTTGCATGCCCTCAAGAAGAAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTACAAACGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS TCA 90 bp | ATTGTAGTACTCATCCACCAGCAGGCTCCCAACTGTACCTTGGGCTaGATCAAATGTGGTAACGACTCGAGCTGGGATGCCCAGGCACCG | + |
Preference number: 5 (lower is better) Translates to: IVVLIHQQAPNCTLG*IKCGNDSSWDAQAP Trigger: CGGTGCCTGGGCATCCCAGCTCGAGTCGTTACCACATTTGATTCAGCCCAAGGTACAGTTGGGAGCCTGCTGGTGGATGAGTACTACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCACGCTGCCCCGACGTTaGTACAACAAGGCACCTTCC | + |
Preference number: 5 (lower is better) Translates to: RGRWISEFKASVIYRVSSTLPRR*YNKAPS Trigger: GGAAGGTGCCTTGTTGTACAAACGTCGGGGCAGCGT...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 90 bp | CTTGCCATTGCCGTGACTCGGAGAAAGCTGTTCTCGGGTGGGGTTTaGTCAAAACAGGAGAAGGACAGGTTGGTGGATAGTCTCATCACC | + |
Preference number: 5 (lower is better) Translates to: LAIAVTRRKLFSGGV*SKQEKDRLVDSLIT Trigger: GGTGATGAGACTATCCACCAACCTGTCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAACAGCTTTCTCCGAGTCACGGCAATGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | TGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTATACACGGCTCGTCCTaGGCCAGTGAGCCACTGCCT | + |
Preference number: 5 (lower is better) Translates to: CAWERPSDGKNRDLICCSIHGSS*ASEPLP Trigger: AGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTAT...ACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CCA 90 bp | TGCAATGAGAGCCACTTTCTTCAGGGCAGACAGAAATGTGTGGGTTaGAGCACGGAAGTTCAGGGTGATAGTGAAGGACTGTCCCCTCCT | + |
Preference number: 5 (lower is better) Translates to: CNESHFLQGRQKCVG*STEVQGDSEGLSPP Trigger: AGGAGGGGACAGTCCTTCACTATCACCCTGAACTTCCGTGCTCCAACCCACACATTTCTGTCTGCCCTGAAGAAAGTGGCTCTCATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | GGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGTGCACTCCACCCTTTTaGGTCCCCAAGAGAGGAAAT | + |
Preference number: 5 (lower is better) Translates to: GKGPVMGRTETSFVVVPWCTPPF*VPKRGN Trigger: ATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGCA...CCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACAGGACACTCTTCTTCTaGAGGGCATGCAACAAGGCG | + |
Preference number: 5 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDRTLFF*RACNKA Trigger: CGCCTTGTTGCATGCCCTCAAGAAGAAGAGTGTCCT...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCAGGACACTCTTCTTCTaGAGGGCATGCAACAAGGCG | + |
Preference number: 5 (lower is better) Translates to: RGRWISEFKASVIYRVSSRTLFF*RACNKA Trigger: CGCCTTGTTGCATGCCCTCAAGAAGAAGAGTGTCCT...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | AGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCGTTCTCGGGTGGGGTTaGCTCAAAACAGGAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: RGRWISEFKASVIYRVSSVLGWG*LKTGEG Trigger: TCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAAC...GGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGATCCACCTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCTTCCACAGTGAGCCTTaGGAGCCCCAGATGTGTTGG | + |
Preference number: 5 (lower is better) Translates to: ISEFKASVIYRVSSWTNSFHSEP*EPQMCW Trigger: CCAACACATCTGGGGCTCCAAAGGCTCACTGTGGAA...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS TCA 90 bp | ACCTTCTTCTCCTCGTCTGTGGGGTTAATCAAGGTCACTGAGAGCTaGCCATCTCCACTCAGAGGGATGGAGCTAGATGCTTCGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: TFFSSSVGLIKVTES*PSPLRGMELDASKN Trigger: GTTCTTCGAAGCATCTAGCTCCATCCCTCTGAGTGGAGATGGTCAGCTCTCAGTGACCTTGATTAACCCCACAGACGAGGAGAAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 90 bp | CTCCACTGCTGCACTCCACCCTTTTTGGTCCCCAAGAGAGGAAATTaGGAAGATGGCTTGGGTCTTATTGATCTTGGAAGGTTGCTCTCC | + |
Preference number: 5 (lower is better) Translates to: LHCCTPPFLVPKRGN*EDGLGLIDLGRLLS Trigger: GGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGCAGCAGTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | GGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGCCATCCACCATAACCTaGGGACAAATCAGGTCTGTT | + |
Preference number: 5 (lower is better) Translates to: GKGPVMGRTETSFVVVPWPSTIT*GQIRSV Trigger: AACAGACCTGATTTGTCCCAAGGTTATGGTGGATGG...CCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | GGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGCTTGGTGCTGATGCAGTaGCCCACATCTTTTCTGTTG | + |
Preference number: 5 (lower is better) Translates to: GPVMGRTETSFVVVPWMSLVLMQ*PTSFLL Trigger: CAACAGAAAAGATGTGGGCAACTGCATCAGCACCAA...GCTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS TCA 90 bp | ATTGTTTCTTTCCTGAAACCTGAAGCAAGAGTGAGTAGTGGCCAATaGCAGCATCCACAGGTGTGGTCACAGAGACGGTCCAGTGTTGGG | + |
Preference number: 5 (lower is better) Translates to: IVSFLKPEARVSSGQ*QHPQVWSQRRSSVG Trigger: CCCAACACTGGACCGTCTCTGTGACCACACCTGTGGATGCTGTCATTGGCCACTACTCACTCTTGCTTCAGGTTTCAGGAAAGAAACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 90 bp | CCTTGGGACAAATCAGGTCTGTTCATCCAGCATTCTACAGACGTTTaGAAGACCCAGATATGGCCCCTCTGTCCTTCTCCATTCTGGAGT | + |
Preference number: 5 (lower is better) Translates to: PWDKSGLFIQHSTDV*KTQIWPLCPSPFWS Trigger: ACTCCAGAATGGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCAAACGTCTGTAGAATGCTGGATGAACAGACCTGATTTGTCCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | GATCTACAGAGTGAGTTCCTGGACCAACAGCACTACATAGAGAAACCCTGTCTCATGAACAACTGCTTCTaGCTCCAGAGACCAGCAGCG | + |
Preference number: 5 (lower is better) Translates to: DLQSEFLDQQHYIEKPCLMNNCF*LQRPAA Trigger: CGCTGCTGGTCTCTGGAGCAAGAAGCAGTTGTTCAT...GAGACAGGGTTTCTCTATGTAGTGCTGTTGGTCCAGGAACTCACTCTGTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CCA 90 bp | CTCCACCCTTTTTGGTCCCCAAGAGAGGAAATTGGGAAGATGGCTTaGGTCTTATTGATCTTGGAAGGTTGCTCTCCCGTTTGTGCAATG | + |
Preference number: 5 (lower is better) Translates to: LHPFWSPREEIGKMA*VLLILEGCSPVCAM Trigger: CATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAAAGGGTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | GGAGCATGGCAGCATTCAGGCAGACATAGGCCCGGAGAAGTAGCTGAGAGTTTTAATTGGGAAGATGGCTaGGGTCTTATTGATCTTGGA | + |
Preference number: 5 (lower is better) Translates to: GAWQHSGRHRPGEVAESFNWEDG*GLIDLG Trigger: TCCAAGATCAATAAGACCCAAGCCATCTTCCCAATT...AAAACTCTCAGCTACTTCTCCGGGCCTATGTCTGCCTGAATGCTGCCATGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | AGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTCCCGTGGATGAGAAAGAGCAGTGTGAATaGGCCCAAGGGGTATTGTTT | + |
Preference number: 5 (lower is better) Translates to: RPSDGKNRDLICCSPVDEKEQCE*AQGVLF Trigger: AAACAATACCCCTTGGGCCAATTCACACTGCTCTTT...CTCATCCACGGGACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGCCCACATCTTTTCTGTaGGAGTTGGTCAACTCCAAC | + |
Preference number: 5 (lower is better) Translates to: WAFETSKPTHQQHTSSNKPTSFL*ELVNSN Trigger: GTTGGAGTTGACCAACTCCAACAGAAAAGATGTGGG...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | TGGGCTTTTGAAACTTCAAAGCCCACCCACCAGCAACACACTTCCTCCAACAAGAGTCTCATCACCTGGTaGGGTTTGAGCATGAACAAC | + |
Preference number: 5 (lower is better) Translates to: WAFETSKPTHQQHTSSNKSLITW*GLSMNN Trigger: GTTGTTCATGCTCAAACCCAACCAGGTGATGAGACT...CTTGTTGGAGGAAGTGTGTTGCTGGTGGGTGGGCTTTGAAGTTTCAAAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | CCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACTATGGCTTGGGTCTTATaGATCTTGGAAGGTTGCTCT | + |
Preference number: 5 (lower is better) Translates to: PLLPRQQNSALLSMTYKTMAWVL*ILEGCS Trigger: AGAGCAACCTTCCAAGATCAATAAGACCCAAGCCAT...AGTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | ATCTCTGAGTTCAAGGCCAGTGTGATCTACAGAGTGAGTTCCTGGACCAACAGCATGGCTTGGGTCTTATaGATCTTGGAAGGTTGCTCT | + |
Preference number: 5 (lower is better) Translates to: ISEFKASVIYRVSSWTNSMAWVL*ILEGCS Trigger: AGAGCAACCTTCCAAGATCAATAAGACCCAAGCCAT...GCTGTTGGTCCAGGAACTCACTCTGTAGATCACACTGGCCTTGAACTCAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACAGAGACGGTCCAGTGTaGGGCATCTCTTTCCTCCAC | + |
Preference number: 5 (lower is better) Translates to: PMQWDFVKSFANSDVCVYRDGPV*GISFLH Trigger: GTGGAGGAAAGAGATGCCCAACACTGGACCGTCTCT...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | CCCACTGTTACCCAGACAACAAAACTCAGCCCTCCTGAGCATGACGTACAAGACCAGTCTTTCACTTGCTaGTCCATACTCAGTAACTTC | + |
Preference number: 5 (lower is better) Translates to: PTVTQTTKLSPPEHDVQDQSFTC*SILSNF Trigger: GAAGTTACTGAGTATGGACAAGCAAGTGAAAGACTG...GTCTTGTACGTCATGCTCAGGAGGGCTGAGTTTTGTTGTCTGGGTAACAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | TGTGCTTGGGAAAGGCCCAGTGATGGGAAGAACAGAGACCTCATTTGTTGTAGTAGAGAGTTACCCTGGTaGGGTTTGAGCATGAACAAC | + |
Preference number: 5 (lower is better) Translates to: CAWERPSDGKNRDLICCSRELPW*GLSMNN Trigger: GTTGTTCATGCTCAAACCCAACCAGGGTAACTCTCT...ACTACAACAAATGAGGTCTCTGTTCTTCCCATCACTGGGCCTTTCCCAAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | ACTAATGCAAAGTTTTTACTAGCCCACTGTTACCCAGACAACAAAACTCAGCCCATGAACAACTGCTTCTaGCTCCAGAGACCAGCAGCG | + |
Preference number: 5 (lower is better) Translates to: TNAKFLLAHCYPDNKTQPMNNCF*LQRPAA Trigger: CGCTGCTGGTCTCTGGAGCAAGAAGCAGTTGTTCAT...GGGCTGAGTTTTGTTGTCTGGGTAACAGTGGGCTAGTAAAAACTTTGCATTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | ACTAATGCAAAGTTTTTACTAGCCCACTGTTACCCAGACAACAAAACTCAGCCCAGAGAGAAGGGACCCTaGTGCATCTTCCCTCTGTCT | + |
Preference number: 5 (lower is better) Translates to: TNAKFLLAHCYPDNKTQPREKGP*CIFPLS Trigger: AGACAGAGGGAAGATGCACAAGGGTCCCTTCTCTCT...GGGCTGAGTTTTGTTGTCTGGGTAACAGTGGGCTAGTAAAAACTTTGCATTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | TCTAGAAGATCATATGTTGGAAAGCAGGGTAAAGCTGCAGTGGGGTGTGGTGTACAGTCTTTCACTTGCTaGTCCATACTCAGTAACTTC | + |
Preference number: 5 (lower is better) Translates to: SRRSYVGKQGKAAVGCGVQSFTC*SILSNF Trigger: GAAGTTACTGAGTATGGACAAGCAAGTGAAAGACTG...TACACCACACCCCACTGCAGCTTTACCCTGCTTTCCAACATATGATCTTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTCCATCCACCATAACCTaGGGACAAATCAGGTCTGTT | + |
Preference number: 5 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTPSTIT*GQIRSV Trigger: AACAGACCTGATTTGTCCCAAGGTTATGGTGGATGG...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 90 bp | TTCTTTTTGGACTTTCTCCAGTACCTCCTTTTCTTGAAGAGATCCTaGAGGATACTTGTAGTTCTGAGTGATGTCTTCACAGCGGTCACT | + |
Preference number: 5 (lower is better) Translates to: FFLDFLQYLLFLKRS*RILVVLSDVFTAVT Trigger: AGTGACCGCTGTGAAGACATCACTCAGAACTACAAGTATCCTGCAGGATCTCTTCAAGAAAAGGAGGTACTGGAGAAAGTCCAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | AAAATACGAGGAACTGTACTAATGGACCTCAGCATTAGAAGGCTGAGAACCACTAAAGAGCAGTGTGAATaGGCCCAAGGGGTATTGTTT | + |
Preference number: 5 (lower is better) Translates to: KIRGTVLMDLSIRRLRTTKEQCE*AQGVLF Trigger: AAACAATACCCCTTGGGCCAATTCACACTGCTCTTT...AGTGGTTCTCAGCCTTCTAATGCTGAGGTCCATTAGTACAGTTCCTCGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS-3UTR CAA 90 bp | ACTAATGCAAAGTTTTTACTAGCCCACTGTTACCCAGACAACAAAACTCAGCCCCTCTGTCTGGAATGCTaGGTACATTTTTCTAGCTGG | + |
Preference number: 5 (lower is better) Translates to: TNAKFLLAHCYPDNKTQPLCLEC*VHFSSW Trigger: CCAGCTAGAAAAATGTACCAAGCATTCCAGACAGAG...GGGCTGAGTTTTGTTGTCTGGGTAACAGTGGGCTAGTAAAAACTTTGCATTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | CCCATGCAGTGGGATTTCGTCAAGAGTTTTGCAAATTCTGATGTTTGTGTCTACAATTGGGAAGATGGCTaGGGTCTTATTGATCTTGGA | + |
Preference number: 5 (lower is better) Translates to: PMQWDFVKSFANSDVCVYNWEDG*GLIDLG Trigger: TCCAAGATCAATAAGACCCAAGCCATCTTCCCAATT...GTAGACACAAACATCAGAATTTGCAAAACTCTTGACGAAATCCCACTGCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | GTTTTGCAAATTCTGATGTTTGTGTCTACTACGGAGTTTTGGACACTGGAGTATCCCACATCTTTTCTGTaGGAGTTGGTCAACTCCAAC | + |
Preference number: 5 (lower is better) Translates to: VLQILMFVSTTEFWTLEYPTSFL*ELVNSN Trigger: GTTGGAGTTGACCAACTCCAACAGAAAAGATGTGGG...ATACTCCAGTGTCCAAAACTCCGTAGTAGACACAAACATCAGAATTTGCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS-3UTR CAA 90 bp | ATAGAGAAACCCTGTCTCAAAAATACCAACCAACCAACCAACCAAATAACCAAATTGGTGCTGATGCAGTaGCCCACATCTTTTCTGTTG | + |
Preference number: 5 (lower is better) Translates to: IEKPCLKNTNQPTNQITKLVLMQ*PTSFLL Trigger: CAACAGAAAAGATGTGGGCAACTGCATCAGCACCAA...TTTGGTTATTTGGTTGGTTGGTTGGTTGGTATTTTTGAGACAGGGTTTCTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS TCA 72 bp | ACGCCTGGGTCTCATACACGGCTCGTCCTTGGCCAGTaGGCCACTGCCTCAGGATGGGCACGCTGCCCCGAC | + |
Preference number: 6 (lower is better) Translates to: TPGSHTRLVLGQ*ATASGWARCPD Trigger: GTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | AACAGCAGCAGACACCCACGCCTGGGTCTCATACACGGCTCGTCCTaGGCCAGTGAGCCACTGCCTCAGGATGGGCACGCTGCCCCGACG | + |
Preference number: 6 (lower is better) Translates to: NSSRHPRLGLIHGSS*ASEPLPQDGHAAPT Trigger: CGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGTGGGTGTCTGCTGCTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | GACACCCACGCCTGGGTCTCATACACGGCTCGTCCTTaGCCAGTGAGCCACTGCCTCAGGATGGGCACGCTG | + |
Preference number: 6 (lower is better) Translates to: DTHAWVSYTARP*PVSHCLRMGTL Trigger: CAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGTGGGTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | AGCCACTGCCTCAGGATGGGCACGCTGCCCCGACGTTaGTACAACAAGGCACCTTCCTGGGCAGCCTGGGTC | + |
Preference number: 6 (lower is better) Translates to: SHCLRMGTLPRR*YNKAPSWAAWV Trigger: GACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTACAAACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | AGACACCCACGCCTGGGTCTCATACACGGCTCGTCCTaGGCCAGTGAGCCACTGCCTCAGGATGGGCACGCT | + |
Preference number: 6 (lower is better) Translates to: RHPRLGLIHGSS*ASEPLPQDGHA Trigger: AGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCAAGGACGAGCCGTGTATGAGACCCAGGCGTGGGTGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | TACTGCGGGGTCCAGCTGCAGTTCCCCCTCCTTGACTaGTCTGACTGGGACCAGACTGCAGGATCCCAGGAC | + |
Preference number: 6 (lower is better) Translates to: YCGVQLQFPLLD*SDWDQTAGSQD Trigger: GTCCTGGGATCCTGCAGTCTGGTCCCAGTCAGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | GCAAAGAGCTCTGGTACTGCGGGGTCCAGCTGCAGTTCCCCCTCCTaGACTGCTCTGACTGGGACCAGACTGCAGGATCCCAGGACTCCA | + |
Preference number: 6 (lower is better) Translates to: AKSSGTAGSSCSSPS*TALTGTRLQDPRTP Trigger: TGGAGTCCTGGGATCCTGCAGTCTGGTCCCAGTCAGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | ACTGCTGCAAAGAGCTCTGGTACTGCGGGGTCCAGCTaGAGTTCCCCCTCCTTGACTGCTCTGACTGGGACC | + |
Preference number: 6 (lower is better) Translates to: TAAKSSGTAGSS*SSPSLTALTGT Trigger: GGTCCCAGTCAGAGCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | TGGCCAGTGAGCCACTGCCTCAGGATGGGCACGCTGCCCCGACGTTaGTACAACAAGGCACCTTCCTGGGCAGCCTGGGTCTGTGAAATA | + |
Preference number: 6 (lower is better) Translates to: WPVSHCLRMGTLPRR*YNKAPSWAAWVCEI Trigger: TATTTCACAGACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTACAAACGTCGGGGCAGCGTGCCCATCCTGAGGCAGTGGCTCACTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | GGCATGCAACAAGGCGCCCACAACTCGGGCCACGTGTaGAGGCTGGTTCCAGTCTTTCACTTGCTTGTCCAT | + |
Preference number: 6 (lower is better) Translates to: GMQQGAHNSGHV*RLVPVFHLLVH Trigger: ATGGACAAGCAAGTGAAAGACTGGAACCAGCCTGCACACGTGGCCCGAGTTGTGGGCGCCTTGTTGCATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | ACACGAGGCATTTACTGCTGCAAAGAGCTCTGGTACTaGGGGGTCCAGCTGCAGTTCCCCCTCCTTGACTGC | + |
Preference number: 6 (lower is better) Translates to: TRGIYCCKELWY*GVQLQFPLLDC Trigger: GCAGTCAAGGAGGGGGAACTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | GCAGACTGCCCAGCCTGGACAAGGGGCTTCCTGTCCTaGACTCTGTCGGTCTCCCCAAATGCTTTCTTACGA | + |
Preference number: 6 (lower is better) Translates to: ADCPAWTRGFLS*TLSVSPNAFLR Trigger: TCGTAAGAAAGCATTTGGGGAGACCGACAGAGTGCAGGACAGGAAGCCCCTTGTCCAGGCTGGGCAGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CCA 72 bp | GCATCCACAGGTGTGGTCACAGAGACGGTCCAGTGTTaGGCATCTCTTTCCTCCACTGCTGCACTCCACCCT | + |
Preference number: 6 (lower is better) Translates to: ASTGVVTETVQC*ASLSSTAALHP Trigger: AGGGTGGAGTGCAGCAGTGGAGGAAAGAGATGCCCAACACTGGACCGTCTCTGTGACCACACCTGTGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | ACAGCACTTCCAGACCACACACGAGGCATTTACTGCTaGAAAGAGCTCTGGTACTGCGGGGTCCAGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: TALPDHTRGIYC*KELWYCGVQLQ Trigger: CTGCAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGGAAGTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | CTCACAGCACTTCCAGACCACACACGAGGCATTTACTaGTGCAAAGAGCTCTGGTACTGCGGGGTCCAGCTG | + |
Preference number: 6 (lower is better) Translates to: LTALPDHTRGIY*CKELWYCGVQL Trigger: CAGCTGGACCCCGCAGTACCAGAGCTCTTTGCAGCAGTAAATGCCTCGTGTGTGGTCTGGAAGTGCTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | GCAGGATCCCAGGACTCCAGCTCCATTAGGAGCCCTTaGGTGCAGAATCTGCCATCCACCATAACCTTGGGA | + |
Preference number: 6 (lower is better) Translates to: AGSQDSSSIRSP*VQNLPSTITLG Trigger: TCCCAAGGTTATGGTGGATGGCAGATTCTGCACCCAAGGGCTCCTAATGGAGCTGGAGTCCTGGGATCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | GCCCAAGAAAGAACCATATGTGTGCAGGGTGTCCGCTaGGGCCAGAGAGAGTTACCCTGGTTGGGTTTGAGC | + |
Preference number: 6 (lower is better) Translates to: AQERTICVQGVR*GQRELPWLGLS Trigger: GCTCAAACCCAACCAGGGTAACTCTCTCTGGCCCCAGCGGACACCCTGCACACATATGGTTCTTTCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 72 bp | CAGGGTGTCCGCTGGGGCCAGAGAGAGTTACCCTGGTaGGGTTTGAGCATGAACAACTGCTTCTTGCTCCAG | + |
Preference number: 6 (lower is better) Translates to: QGVRWGQRELPW*GLSMNNCFLLQ Trigger: CTGGAGCAAGAAGCAGTTGTTCATGCTCAAACCCAACCAGGGTAACTCTCTCTGGCCCCAGCGGACACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 90 bp | GCCAATGACAGCATCCACAGGTGTGGTCACAGAGACGGTCCAGTGTaGGGCATCTCTTTCCTCCACTGCTGCACTCCACCCTTTTTGGTC | + |
Preference number: 6 (lower is better) Translates to: ANDSIHRCGHRDGPV*GISFLHCCTPPFLV Trigger: GACCAAAAAGGGTGGAGTGCAGCAGTGGAGGAAAGAGATGCCCAACACTGGACCGTCTCTGTGACCACACCTGTGGATGCTGTCATTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS TCA 72 bp | CTCATCCACCAGCAGGCTCCCAACTGTACCTTGGGCTaGATCAAATGTGGTAACGACTCGAGCTGGGATGCC | + |
Preference number: 6 (lower is better) Translates to: LIHQQAPNCTLG*IKCGNDSSWDA Trigger: GGCATCCCAGCTCGAGTCGTTACCACATTTGATTCAGCCCAAGGTACAGTTGGGAGCCTGCTGGTGGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | TGTGAAATAGGCAGGACACTCTTCTTCTTGAGGGCATaGAACAAGGCGCCCACAACTCGGGCCACGTGTGCA | + |
Preference number: 6 (lower is better) Translates to: CEIGRTLFFLRA*NKAPTTRATCA Trigger: TGCACACGTGGCCCGAGTTGTGGGCGCCTTGTTGCATGCCCTCAAGAAGAAGAGTGTCCTGCCTATTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | GTCCGCTGGGGCCAGAGAGAGTTACCCTGGTTGGGTTaGAGCATGAACAACTGCTTCTTGCTCCAGAGACCA | + |
Preference number: 6 (lower is better) Translates to: VRWGQRELPWLG*SMNNCFLLQRP Trigger: TGGTCTCTGGAGCAAGAAGCAGTTGTTCATGCTCAAACCCAACCAGGGTAACTCTCTCTGGCCCCAGCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS TCA 72 bp | GTACAACAAGGCACCTTCCTGGGCAGCCTGGGTCTGTaGAATAGGCAGGACACTCTTCTTCTTGAGGGCATG | + |
Preference number: 6 (lower is better) Translates to: VQQGTFLGSLGL*NRQDTLLLEGM Trigger: CATGCCCTCAAGAAGAAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | GCTGATGGCCTTGGTGTAGTGCTCCTCGTTGTTTTCTaGTGCGTGGAAGTCACAGCTCTTGATGCTCAGAGC | + |
Preference number: 6 (lower is better) Translates to: ADGLGVVLLVVF*CVEVTALDAQS Trigger: GCTCTGAGCATCAAGAGCTGTGACTTCCACGCAGCAGAAAACAACGAGGAGCACTACACCAAGGCCATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | GGGCTTCCTGTCCTGCACTCTGTCGGTCTCCCCAAATaGTTTCTTACGACAGGGTGGGCTGTGTACTTATCT | + |
Preference number: 6 (lower is better) Translates to: GLPVLHSVGLPK*FLTTGWAVYLS Trigger: AGATAAGTACACAGCCCACCCTGTCGTAAGAAAGCATTTGGGGAGACCGACAGAGTGCAGGACAGGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS GCA 72 bp | GCCGTGACTCGGAGAAAGCTGTTCTCGGGTGGGGTTTaGTCAAAACAGGAGAAGGACAGGTTGGTGGATAGT | + |
Preference number: 6 (lower is better) Translates to: AVTRRKLFSGGV*SKQEKDRLVDS Trigger: ACTATCCACCAACCTGTCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAACAGCTTTCTCCGAGTCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CCA 72 bp | TGCCATTGCCGTGACTCGGAGAAAGCTGTTCTCGGGTaGGGTTTGCTCAAAACAGGAGAAGGACAGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: CHCRDSEKAVLG*GLLKTGEGQVG Trigger: ACCAACCTGTCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAACAGCTTTCTCCGAGTCACGGCAATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS TCA 72 bp | TTCCTGAAACCTGAAGCAAGAGTGAGTAGTGGCCAATaGCAGCATCCACAGGTGTGGTCACAGAGACGGTCC | + |
Preference number: 6 (lower is better) Translates to: FLKPEARVSSGQ*QHPQVWSQRRS Trigger: GGACCGTCTCTGTGACCACACCTGTGGATGCTGTCATTGGCCACTACTCACTCTTGCTTCAGGTTTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS TCA 72 bp | TCCTCGTCTGTGGGGTTAATCAAGGTCACTGAGAGCTaGCCATCTCCACTCAGAGGGATGGAGCTAGATGCT | + |
Preference number: 6 (lower is better) Translates to: SSSVGLIKVTES*PSPLRGMELDA Trigger: AGCATCTAGCTCCATCCCTCTGAGTGGAGATGGTCAGCTCTCAGTGACCTTGATTAACCCCACAGACGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | AGTCTCATCACCTGGTTGGGTTTGAGCATGAACAACTaGTTCTTGCTCCAGAGACCAGCAGCGAGGACTCCA | + |
Preference number: 6 (lower is better) Translates to: SLITWLGLSMNN*FLLQRPAARTP Trigger: TGGAGTCCTCGCTGCTGGTCTCTGGAGCAAGAAGCAGTTGTTCATGCTCAAACCCAACCAGGTGATGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CCA 72 bp | CGACGTTTGTACAACAAGGCACCTTCCTGGGCAGCCTaGGTCTGTGAAATAGGCAGGACACTCTTCTTCTTG | + |
Preference number: 6 (lower is better) Translates to: RRLYNKAPSWAA*VCEIGRTLFFL Trigger: CAAGAAGAAGAGTGTCCTGCCTATTTCACAGACCCAGGCTGCCCAGGAAGGTGCCTTGTTGTACAAACGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | CGAAGAACATGTGTAGAGGATCCCAGGGCTCACAACTaGGAGGACACATGCCGTTGTCTTTCCCAAGCTTCA | + |
Preference number: 6 (lower is better) Translates to: RRTCVEDPRAHN*EDTCRCLSQAS Trigger: TGAAGCTTGGGAAAGACAACGGCATGTGTCCTCCCAGTTGTGAGCCCTGGGATCCTCTACACATGTTCTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | ACAACTCGGGCCACGTGTGCAGGCTGGTTCCAGTCTTTCACTTGCTaGTCCATACTCAGTAACTTCAGGCTGAGGTCCATGACGTCTTTC | + |
Preference number: 6 (lower is better) Translates to: TTRATCAGWFQSFTC*SILSNFRLRSMTSF Trigger: GAAAGACGTCATGGACCTCAGCCTGAAGTTACTGAGTATGGACAAGCAAGTGAAAGACTGGAACCAGCCTGCACACGTGGCCCGAGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | CCAGTGTTGGGCATCTCTTTCCTCCACTGCTGCACTCCACCCTTTTaGGTCCCCAAGAGAGGAAATTGGGAAGATGGCTTGGGTCTTATT | + |
Preference number: 6 (lower is better) Translates to: PVLGISFLHCCTPPF*VPKRGNWEDGLGLI Trigger: AATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGCAGCAGTGGAGGAAAGAGATGCCCAACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | AGCCACTTTCTTCAGGGCAGACAGAAATGTGTGGGTTaGAGCACGGAAGTTCAGGGTGATAGTGAAGGACTG | + |
Preference number: 6 (lower is better) Translates to: SHFLQGRQKCVG*STEVQGDSEGL Trigger: CAGTCCTTCACTATCACCCTGAACTTCCGTGCTCCAACCCACACATTTCTGTCTGCCCTGAAGAAAGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | GGATCCCAGGGCTCACAACTGGGAGGACACATGCCGTaGTCTTTCCCAAGCTTCAGTCTTTCTTTTTGGACT | + |
Preference number: 6 (lower is better) Translates to: GSQGSQLGGHMP*SFPSFSLSFWT Trigger: AGTCCAAAAAGAAAGACTGAAGCTTGGGAAAGACAACGGCATGTGTCCTCCCAGTTGTGAGCCCTGGGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | TCTAGCTGGCCCTTCTTCATTCTTCAAAACAGCCTTTaGTGGATCATCTGGGTGCAGACTGCCCAGCCTGGA | + |
Preference number: 6 (lower is better) Translates to: SSWPFFILQNSL*WIIWVQTAQPG Trigger: TCCAGGCTGGGCAGTCTGCACCCAGATGATCCACAAAAGGCTGTTTTGAAGAATGAAGAAGGGCCAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 72 bp | CTGGAACATGTCACAATCTACTTCCACAGTGAGCCTTaGGAGCCCCAGATGTGTTGGGGTGAACTGGAACTG | + |
Preference number: 6 (lower is better) Translates to: LEHVTIYFHSEP*EPQMCWGELEL Trigger: CAGTTCCAGTTCACCCCAACACATCTGGGGCTCCAAAGGCTCACTGTGGAAGTAGATTGTGACATGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CAA 90 bp | ACCTTGGGACAAATCAGGTCTGTTCATCCAGCATTCTACAGACGTTaGGAAGACCCAGATATGGCCCCTCTGTCCTTCTCCATTCTGGAG | + |
Preference number: 6 (lower is better) Translates to: TLGQIRSVHPAFYRR*EDPDMAPLSFSILE Trigger: CTCCAGAATGGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCAAACGTCTGTAGAATGCTGGATGAACAGACCTGATTTGTCCCAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | AAGCTGTTCTCGGGTGGGGTTTGCTCAAAACAGGAGAAGGACAGGTaGGTGGATAGTCTCATCACCTGGTTGGGTTTGAGCATGAACAAC | + |
Preference number: 6 (lower is better) Translates to: KLFSGGVCSKQEKDR*VDSLITWLGLSMNN Trigger: GTTGTTCATGCTCAAACCCAACCAGGTGATGAGACTATCCACCAACCTGTCCTTCTCCTGTTTTGAGCAAACCCCACCCGAGAACAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 72 bp | GTAGAGGATCCCAGGGCTCACAACTGGGAGGACACATaGCGTTGTCTTTCCCAAGCTTCAGTCTTTCTTTTT | + |
Preference number: 6 (lower is better) Translates to: VEDPRAHNWEDT*RCLSQASVFLF Trigger: AAAAAGAAAGACTGAAGCTTGGGAAAGACAACGGCATGTGTCCTCCCAGTTGTGAGCCCTGGGATCCTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | CATTCTAACGGAGACAGTGAGGGGCCGATACTGTGCTaGTCTCTTTGGCATCTCGATGATAAGATCCGGTTT | + |
Preference number: 6 (lower is better) Translates to: HSNGDSEGPILC*SLWHLDDKIRF Trigger: AAACCGGATCTTATCATCGAGATGCCAAAGAGAGCAGCACAGTATCGGCCCCTCACTGTCTCCGTTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 72 bp | ATGAGTCCCCTTCCAAAGATGGAGATGATGCAGTTCTaGATGGGGGCCTCTAAGGAGTTGTGCATTCTAACG | + |
Preference number: 6 (lower is better) Translates to: MSPLPKMEMMQF*MGASKELCILT Trigger: CGTTAGAATGCACAACTCCTTAGAGGCCCCCATGCAGAACTGCATCATCTCCATCTTTGGAAGGGGACTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS CAA 72 bp | CAAATCAGGTCTGTTCATCCAGCATTCTACAGACGTTaGGAAGACCCAGATATGGCCCCTCTGTCCTTCTCC | + |
Preference number: 6 (lower is better) Translates to: QIRSVHPAFYRR*EDPDMAPLSFS Trigger: GGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCAAACGTCTGTAGAATGCTGGATGAACAGACCTGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | GTGCTGATGCAGTTGCCCACATCTTTTCTGTTGGAGTaGGTCAACTCCAACTTCCCATCCTCACAGCACTTC | + |
Preference number: 6 (lower is better) Translates to: VLMQLPTSFLLE*VNSNFPSSQHF Trigger: GAAGTGCTGTGAGGATGGGAAGTTGGAGTTGACCAACTCCAACAGAAAAGATGTGGGCAACTGCATCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | GACAGGTTGGTGGATAGTCTCATCACCTGGTTGGGTTaGAGCATGAACAACTGCTTCTTGCTCCAGAGACCA | + |
Preference number: 6 (lower is better) Translates to: DRLVDSLITWLG*SMNNCFLLQRP Trigger: TGGTCTCTGGAGCAAGAAGCAGTTGTTCATGCTCAAACCCAACCAGGTGATGAGACTATCCACCAACCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102490.10 |
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CDS GCA 72 bp | GGGAAGATGGCTTGGGTCTTATTGATCTTGGAAGGTTaGTCTCCCGTTTGTGCAATGAGAGCCACTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: GKMAWVLLILEG*SPVCAMRATFF Trigger: GAAGAAAGTGGCTCTCATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | TGCACTCCACCCTTTTTGGTCCCCAAGAGAGGAAATTaGGAAGATGGCTTGGGTCTTATTGATCTTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: CTPPFLVPKRGN*EDGLGLIDLGR Trigger: CCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | AAATCAGGTCTGTTCATCCAGCATTCTACAGACGTTTaGAAGACCCAGATATGGCCCCTCTGTCCTTCTCCA | + |
Preference number: 6 (lower is better) Translates to: KSGLFIQHSTDV*KTQIWPLCPSP Trigger: TGGAGAAGGACAGAGGGGCCATATCTGGGTCTTCCAAACGTCTGTAGAATGCTGGATGAACAGACCTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CCA 72 bp | AAGAGAGAAGGGACCCTTGTGCATCTTCCCTCTGTCTaGAATGCTTGGTACATTTTTCTAGCTGGCCCTTCT | + |
Preference number: 6 (lower is better) Translates to: KREGTLVHLPSV*NAWYIFLAGPS Trigger: AGAAGGGCCAGCTAGAAAAATGTACCAAGCATTCCAGACAGAGGGAAGATGCACAAGGGTCCCTTCTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 72 bp | GAGGAAATTGGGAAGATGGCTTGGGTCTTATTGATCTaGGAAGGTTGCTCTCCCGTTTGTGCAATGAGAGCC | + |
Preference number: 6 (lower is better) Translates to: EEIGKMAWVLLI*EGCSPVCAMRA Trigger: GGCTCTCATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | TCCCCAAGAGAGGAAATTGGGAAGATGGCTTGGGTCTTATTGATCTaGGAAGGTTGCTCTCCCGTTTGTGCAATGAGAGCCACTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SPREEIGKMAWVLLI*EGCSPVCAMRATFF Trigger: GAAGAAAGTGGCTCTCATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | TTTTGGTCCCCAAGAGAGGAAATTGGGAAGATGGCTTGGGTCTTATaGATCTTGGAAGGTTGCTCTCCCGTTTGTGCAATGAGAGCCACT | + |
Preference number: 6 (lower is better) Translates to: FWSPREEIGKMAWVL*ILEGCSPVCAMRAT Trigger: AGTGGCTCTCATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 90 bp | ACTCCACCCTTTTTGGTCCCCAAGAGAGGAAATTGGGAAGATGGCTaGGGTCTTATTGATCTTGGAAGGTTGCTCTCCCGTTTGTGCAAT | + |
Preference number: 6 (lower is better) Translates to: TPPFLVPKRGNWEDG*GLIDLGRLLSRLCN Trigger: ATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAAAGGGTGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS GCA 72 bp | AGAAGGGACCCTTGTGCATCTTCCCTCTGTCTGGAATaGTTGGTACATTTTTCTAGCTGGCCCTTCTTCATT | + |
Preference number: 6 (lower is better) Translates to: RRDPCASSLCLE*LVHFSSWPFFI Trigger: AATGAAGAAGGGCCAGCTAGAAAAATGTACCAAGCATTCCAGACAGAGGGAAGATGCACAAGGGTCCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CCA 72 bp | TTTTGGTCCCCAAGAGAGGAAATTGGGAAGATGGCTTaGGTCTTATTGATCTTGGAAGGTTGCTCTCCCGTT | + |
Preference number: 6 (lower is better) Translates to: FWSPREEIGKMA*VLLILEGCSPV Trigger: AACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCAATTTCCTCTCTTGGGGACCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | TGGGAAGATGGCTTGGGTCTTATTGATCTTGGAAGGTaGCTCTCCCGTTTGTGCAATGAGAGCCACTTTCTT | + |
Preference number: 6 (lower is better) Translates to: WEDGLGLIDLGR*LSRLCNESHFL Trigger: AAGAAAGTGGCTCTCATTGCACAAACGGGAGAGCAACCTTCCAAGATCAATAAGACCCAAGCCATCTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |
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CDS CAA 72 bp | AGGGACCCTTGTGCATCTTCCCTCTGTCTGGAATGCTaGGTACATTTTTCTAGCTGGCCCTTCTTCATTCTT | + |
Preference number: 6 (lower is better) Translates to: RDPCASSLCLEC*VHFSSWPFFIL Trigger: AAGAATGAAGAAGGGCCAGCTAGAAAAATGTACCAAGCATTCCAGACAGAGGGAAGATGCACAAGGGTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 90 bp | AAAGAGAGAAGGGACCCTTGTGCATCTTCCCTCTGTCTGGAATGCTaGGTACATTTTTCTAGCTGGCCCTTCTTCATTCTTCAAAACAGC | + |
Preference number: 6 (lower is better) Translates to: KERRDPCASSLCLEC*VHFSSWPFFILQNS Trigger: GCTGTTTTGAAGAATGAAGAAGGGCCAGCTAGAAAAATGTACCAAGCATTCCAGACAGAGGGAAGATGCACAAGGGTCCCTTCTCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023987.6 |
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CDS CAA 90 bp | AAGCTTCAGTCTTTCTTTTTGGACTTTCTCCAGTACCTCCTTTTCTaGAAGAGATCCTGCAGGATACTTGTAGTTCTGAGTGATGTCTTC | + |
Preference number: 6 (lower is better) Translates to: KLQSFFLDFLQYLLF*KRSCRILVVLSDVF Trigger: GAAGACATCACTCAGAACTACAAGTATCCTGCAGGATCTCTTCAAGAAAAGGAGGTACTGGAGAAAGTCCAAAAAGAAAGACTGAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023987.6 ENSMUST00000102490.10 |