Pregenerated sensors for EPAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024140Ensembl transcript IDs: ENSMUST00000024954.11
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGACTGAGACCTCAGCTAGAGGCTGTCCTTGGAGGTCTGCCCGCTaGTCGCCAGCAGGGGGCGCTGCACCGTGGCTTCGCAGGGTCATT | + |
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Preference number: 1 (lower is better) Translates to: VTETSARGCPWRSAR*SPAGGAAPWLRRVI Trigger: AATGACCCTGCGAAGCCACGGTGCAGCGCCCCCTGCTGGCGAGCAGCGGGCAGACCTCCAAGGACAGCCTCTAGCTGAGGTCTCAGTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR CCA 90 bp | AGTGTCACACTTCATGTGACTGAGACCTCAGCTAGAGGCTGTCCTTaGAGGTCTGCCCGCTGCTCGCCAGCAGGGGGCGCTGCACCGTGG | + |
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Preference number: 1 (lower is better) Translates to: SVTLHVTETSARGCP*RSARCSPAGGAAPW Trigger: CCACGGTGCAGCGCCCCCTGCTGGCGAGCAGCGGGCAGACCTCCAAGGACAGCCTCTAGCTGAGGTCTCAGTCACATGAAGTGTGACACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 90 bp | ACCAGCATTTGCATGTCAATAACCCTTCAAGTTCCGTCGCCCGCCTaGGTGTGTGCCAGGCCACACTGTGCACCGATGCGCAGCTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: TSICMSITLQVPSPA*VCARPHCAPMRSLD Trigger: GTCCAAGCTGCGCATCGGTGCACAGTGTGGCCTGGCACACACGCAGGCGGGCGACGGAACTTGAAGGGTTATTGACATGCAAATGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 90 bp | CCCTTAACGCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTaGATGTCAATAACCCTTCAAGTTCCGTCGCCCGCCTGCGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PLTLRQQHRKSNTSI*MSITLQVPSPACVC Trigger: ACACACGCAGGCGGGCGACGGAACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGCGTTAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR TCA 90 bp | ATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTTaGCAATGCAGTAATGGTCATGAAGTTGTTACATGGACAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: IKLSSRTVIMSSVGI*QCSNGHEVVTWTGK Trigger: CTTTCCTGTCCATGTAACAACTTCATGACCATTACTGCATTGTCAAATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR GCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGCCAGCAGGGGGCGCTaGACCGTGGCTTCGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIASRGR*TVASQG Trigger: ACCCTGCGAAGCCACGGTGCAGCGCCCCCTGCTGGC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAACACTGCTTGGTGACCTaGCCAGTAGGCCAGGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RVSLVELQTEMPLTLRQQHCLVT*PVGQVE Trigger: CTCAACCTGGCCTACTGGCCAGGTCACCAAGCAGTG...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR GCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTTCCTTCCAGCTCGCCTaGGACATGCCCTCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSSFQLA*DMPSEP Trigger: AGGCTCTGAGGGCATGTCGCAGGCGAGCTGGAAGGA...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAATCAGATAAAGGCCACTaGTTGGTGACCTGGCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: WDCHTAAISQKQKVTREKSDKGH*LVTWPV Trigger: TACTGGCCAGGTCACCAAGCAGTGGCCTTTATCTGA...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR TCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTACATGGATAATAAAGTaGGCATGTCAGATAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VYVCRGVCVCVCVCARIRTWIIK*ACQIKA Trigger: GGCCTTTATCTGACATGCTCACTTTATTATCCATGT...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR TCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTTCCCCTCCCCCTCAGTaGGTTACAAAGTGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: HFLIKLSSRTVIMSSVGISPPPQ*VTKCSW Trigger: CCAAGAGCACTTTGTAACTCACTGAGGGGGAGGGGA...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR TCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTTACTGTACTCTTGCCTaGTGGGCTTTGTGTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIYCTLA*WALCVL Trigger: CAACACACACAAAGCCCATCAGGCAAGAGTACAGTA...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTAGGTCACTACATTTGTaGATCCTAACTTGCTTTATG | + |
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Preference number: 2 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSRSLHL*ILTCFM Trigger: CATAAAGCAAGTTAGGATTCACAAATGTAGTGACCT...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTTTCAGAGTTAATTTTTaGTTTGAGCAGCAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIFRVNF*FEQQVP Trigger: GGGGACTTGCTGCTCAAACCAAAAATTAACTCTGAA...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 72 bp | TTGGAGGTCTGCCCGCTGCTCGCCAGCAGGGGGCGCTaGACCGTGGCTTCGCAGGGTCATTTGCCCGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: LEVCPLLASRGR*TVASQGHLPGK Trigger: CTTGCCGGGCAAATGACCCTGCGAAGCCACGGTGCAGCGCCCCCTGCTGGCGAGCAGCGGGCAGACCTCCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR TCA 72 bp | ACCGTGGCTTCGCAGGGTCATTTGCCCGGCAAGCTGTaGTCTGTGGCAGGGTGTAGGGCTGGTCAGACCTGC | + |
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Preference number: 3 (lower is better) Translates to: TVASQGHLPGKL*SVAGCRAGQTC Trigger: GCAGGTCTGACCAGCCCTACACCCTGCCACAGATCACAGCTTGCCGGGCAAATGACCCTGCGAAGCCACGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 72 bp | AAAGTGAGAGCGCTTCCTTCCAGCTCGCCTGCGACATaGCCTCAGAGCCTGCAAGCCCCGAGCCCTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: KVRALPSSSPAT*PQSLQAPSPHS Trigger: GCTATGAGGGCTCGGGGCTTGCAGGCTCTGAGGGCATGTCGCAGGCGAGCTGGAAGGAAGCGCTCTCACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR CCA 72 bp | CTTCGCAGGGTCATTTGCCCGGCAAGCTGTGATCTGTaGCAGGGTGTAGGGCTGGTCAGACCTGCTACCCTC | + |
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Preference number: 3 (lower is better) Translates to: LRRVICPASCDL*QGVGLVRPATL Trigger: GAGGGTAGCAGGTCTGACCAGCCCTACACCCTGCCACAGATCACAGCTTGCCGGGCAAATGACCCTGCGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR TCA 72 bp | AGGCCACTGCTTGGTGACCTGGCCAGTAGGCCAGGTTaGGTACATCTCGTAAGAAGTGTGCTGGTGTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: RPLLGDLASRPG*VHLVRSVLVLE Trigger: CTCTAACACCAGCACACTTCTTACGAGATGTACTCAACCTGGCCTACTGGCCAGGTCACCAAGCAGTGGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CAA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTGATAAAGGCCACTGCTaGGTGACCTGGCCAGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: VYVCRGVCVCVCVCARIRDKGHC*VTWPVG Trigger: GCCTACTGGCCAGGTCACCAAGCAGTGGCCTTTATC...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 72 bp | CTGAGGCAACAACACAGGAAATCAAACACCAGCATTTaGATGTCAATAACCCTTCAAGTTCCGTCGCCCGCC | + |
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Preference number: 3 (lower is better) Translates to: LRQQHRKSNTSI*MSITLQVPSPA Trigger: GGCGGGCGACGGAACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 72 bp | ATGGATAATAAAGTGAGCATGTCAGATAAAGGCCACTaGTTGGTGACCTGGCCAGTAGGCCAGGTTGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: MDNKVSMSDKGH*LVTWPVGQVEY Trigger: GTACTCAACCTGGCCTACTGGCCAGGTCACCAAGCAGTGGCCTTTATCTGACATGCTCACTTTATTATCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR GCA 72 bp | CCCTTAATGACTTCTCTCCTGGGACTGTCACACCGCTaGCATATCACAAAAGCAAAAAGTCACCAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: PLMTSLLGLSHR*HITKAKSHQRE Trigger: TTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCAGGAGAGAAGTCATTAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR TCA 72 bp | CTTACTGTACTCTTGCCTGATGGGCTTTGTGTGTGTTaGGAGTTTTATTGTACCCGAGTCAACAACACCTTA | + |
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Preference number: 3 (lower is better) Translates to: LTVLLPDGLCVC*EFYCTRVNNTL Trigger: TAAGGTGTTGTTGACTCGGGTACAATAAAACTCTCAACACACACAAAGCCCATCAGGCAAGAGTACAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CAA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTACACGAAAAGATAGCTaGCAATGTTCCCCCTTAATG | + |
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Preference number: 3 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSTRKDS*QCSPLM Trigger: CATTAAGGGGGAACATTGCAAGCTATCTTTTCGTGT...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CAA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTCTTCACATTGCTTTTTaGCCCCATACTAAGTCGTAT | + |
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Preference number: 3 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSLHIAF*PHTKSY Trigger: ATACGACTTAGTATGGGGCAAAAAAGCAATGTGAAG...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CAA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTCAGGTAACCCTAGAGTaGATTCTTCACATTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIQVTLE*ILHIAF Trigger: AAAAGCAATGTGAAGAATCAACTCTAGGGTTACCTG...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR-3UTR CAA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTAACCGGAGCAAAGAGTaGGCTTTAAAAACACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: HFLIKLSSRTVIMSSVGINRSKE*ALKTQN Trigger: ATTTTGTGTTTTTAAAGCCAACTCTTTGCTCCGGTT...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATATCCCCTGCAGGAGTGTaGAGCTTCCAGGCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWISPAGV*SFQARA Trigger: TGCCCGTGCCTGGAAGCTCCACACTCCTGCAGGGGA...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATATCGACTGGCCACGCCTaGCACCTTTTGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWISTGHA*HLLSSW Trigger: CCAGGAGCTCAAAAGGTGTCAGGCGTGGCCAGTCGA...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATACCTGGTCCAGAGCTCTaGGAAGGTCTCTCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIPGPEL*EGLSPA Trigger: TGCAGGGGAGAGACCTTCTCAGAGCTCTGGACCAGG...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTGTTCCCTGGGGTGTCTaGCTGGGGCACAGTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRVPWGV*LGHSEG Trigger: GCCTTCACTGTGCCCCAGGCAGACACCCCAGGGAAC...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTTGGTGGCTGGGGAGGTaGCAGGTGTCTCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRWWLGR*QVSQWL Trigger: CAGCCACTGAGACACCTGCCACCTCCCCAGCCACCA...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGACACACATGATACACTaGGGCTGCAGGTTGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGTHMIH*GCRLRG Trigger: CCCCCGCAACCTGCAGCCTCAGTGTATCATGTGTGT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTGGGTGGCCCCCGGGGTaGGCGGCTGGAAGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSGWPPG*AAGRCW Trigger: CCAGCATCTTCCAGCCGCTCACCCCGGGGGCCACCC...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTCCTCCGTCTCCTTGCTaGGCCGGCACCTCGCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPPPSPC*AGTSRH Trigger: ATGCCGCGAGGTGCCGGCGCAGCAAGGAGACGGAGG...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGGATCCGGGGGCCACTaGGTGTTGGATCTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKGSGGH*VLDLPP Trigger: GGGAGGCAGATCCAACACGCAGTGGCCCCCGGATCC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGAGGGGGATGTCCATGTaGGATGGGTGCTGGATTGGC | + |
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Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGRGMSM*DGCWIG Trigger: GCCAATCCAGCACCCATCCCACATGGACATCCCCCT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGGCCCGGGGGAAGGATaGCCTTGCCATAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKGPGEG*PCHRLR Trigger: CCTCAGCCTATGGCAAGGCCATCCTTCCCCCGGGCC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGCAGATGGGGCTCAGCTaGAAGTCCTCGCCGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGQMGLS*KSSPSI Trigger: TATGGACGGCGAGGACTTCCAGCTGAGCCCCATCTG...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTAAGAGAGAGGGGTGCTaGCCTGGCCACAGCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRKREGC*PGHSME Trigger: CTCCATGCTGTGGCCAGGCCAGCACCCCTCTCTCTT...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAACTCCCGGACTCGCTCTaGGCACTGTGGCTCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RVSLVELQTEMPLTLRQQLPDSL*ALWLLS Trigger: GCTGAGGAGCCACAGTGCCCAGAGCGAGTCCGGGAG...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAACCTGGGGTGTCTGCCTaGGGCACAGTGAAGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RVSLVELQTEMPLTLRQQPGVSA*GTVKAG Trigger: GCCAGCCTTCACTGTGCCCCAGGCAGACACCCCAGG...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAAGTCCTCAGGGCTGCTaGGCGTGGAGCAGCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKSPQGC*AWSSYC Trigger: GCAGTAGCTGCTCCACGCCCAGCAGCCCTGAGGACT...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGGGGTCACCACAGCAATaGAACCCTCCAAGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGGSPQQ*NPPRLS Trigger: TGAAAGCCTTGGAGGGTTTCATTGCTGTGGTGACCC...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGTGCACTTCATCCTCATaGAGAAGTCACGCTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGCTSSS*RSHARW Trigger: CCACCGAGCGTGACTTCTTCATGAGGATGAAGTGCA...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGTCCATGTGGGATGGGTaGTGGATTGGCTCACACATG | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGSMWDG*WIGSHM Trigger: CATGTGTGAGCCAATCCAGCACCCATCCCACATGGA...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR GCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATACAGACTCTGTCTTCCTaGTTTCCAACTGCTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIQTLSS*FPTAAG Trigger: ACCCGCAGCAGTTGGAAAGCAGGAAGACAGAGTCTG...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATAGATGTCCATGTGGGATaGGTGCTGGATTGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIDVHVG*VLDWLT Trigger: TGTGAGCCAATCCAGCACCCATCCCACATGGACATC...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGATACCACCTGCCCCTTaGTGCACAAGTTCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGIPPAP*CTSSGD Trigger: GTCACCAGAACTTGTGCACCAAGGGGCAGGTGGTAT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGCATATCCTCCGTGTTTaGCTAGCATCCGGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGHILRV*LASGTG Trigger: GCCAGTACCGGATGCTAGCCAAACACGGAGGATATG...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTCAGGGCTGCTGGGCGTaGAGCAGCTACTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPQGCWA*SSYCCL Trigger: CAAGCAGCAGTAGCTGCTCCACGCCCAGCAGCCCTG...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTAGAGGGGTGCTGGCCTaGCCACAGCATGGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPRGVLA*PQHGDR Trigger: CCTGTCTCCATGCTGTGGCCAGGCCAGCACCCCTCT...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR GCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATATTCCTGCTTTCCAACTaGTGCGGGTACTTATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIFLLSN*CGYLSR Trigger: CCTCGATAAGTACCCGCAGCAGTTGGAAAGCAGGAA...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAAGCTAGCATCCGGTACTaGCCAGATACCACCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVELQTEMPLTLRQQASIRY*PDTTCP Trigger: GGGGCAGGTGGTATCTGGCCAGTACCGGATGCTAGC...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGATTCGGTCTGGTCCATaGAGAACACCACGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGIRSGP*RTPRRS Trigger: AGAACGACGTGGTGTTCTCCATGGACCAGACCGAAT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTTCGCTCTGGGCACTGTaGCTCCTCAGCCCCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSSLWAL*LLSPET Trigger: GGTCTCGGGGCTGAGGAGCCACAGTGCCCAGAGCGA...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATATCGGCTCCGTGTCCATaGCGAAAAGCTTCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWISAPCP*RKASQS Trigger: TGATTGAGAAGCTTTTCGCCATGGACACGGAGCCGA...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAAGCTCCTCTGGGCAGATaGGGCTCAGCTGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVELQTEMPLTLRQQAPLGR*GSAGSP Trigger: AGGACTTCCAGCTGAGCCCCATCTGCCCAGAGGAGC...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGCCTCACAGTCATATCTaGTCAGTTCCGGCAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGPHSHI*SVPATG Trigger: ACCTGTTGCCGGAACTGACCAGATATGACTGTGAGG...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATAGTGCACAAGTTCTGGTaGCTTTTGGTCATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIVHKFW*LLVMFS Trigger: GGAGAACATGACCAAAAGTCACCAGAACTTGTGCAC...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTTGCGGGGGTTGTAGATaGCCGTCCCCTGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSCGGCR*PSPGSP Trigger: TGGAGACCCAGGGGACGGTCATCTACAACCCCCGCA...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTTTGCAGACCTCATCTTaGACATGGAGACATGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRLQTSS*TWRHEA Trigger: CGCCTCATGTCTCCATGTTCAAGATGAGGTCTGCAA...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGGGCCATGTTCGCACTaGTGGTCTTGTCAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKGPCSH*WSCQAS Trigger: TGATGCCTGACAAGACCATCAGTGCGAACATGGCCC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR GCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTCGGTGGACACGTCTTTaGTCTTCTTCCCAAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRRWTRL*SSSQNQ Trigger: CTGGTTTTGGGAAGAAGAGCAAAGACGTGTCCACCG...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR GCA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATACACTGCTGTCAAAGATaGTGTTCATGGCCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSFPRERHQPPCLLVWIHCCQR*CSWPSG Trigger: ACCTGATGGCCATGAACAGCATCTTTGACAGCAGTG...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTGCGTGGAGCAGCTACTaGTGCTTGAAGCACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPAWSSY*CLKHWV Trigger: CACCCAGTGCTTCAAGCAGCAGTAGCTGCTCCACGC...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGGGGTGGGGGCCAACTaGGCCAGTTCCTCGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIGVGAN*ASSSGS Trigger: GGAGCCCGAGGAACTGGCCCAGTTGGCCCCCACCCC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGATTTTCAGAGCAGACTaGGGACAGGAGCTTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGIFRAD*GQELMC Trigger: ACACATAAGCTCCTGTCCTCAGTCTGCTCTGAAAAT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGCCTGTTAGTTCTACCTaGGTAAGTCCCATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYLIATQMEVKLAGQDGGPVSST*VSPMNL Trigger: CAAGTTCATGGGACTTACTCAGGTAGAACTAACAGG...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTGGCCTTGCCATAGGCTaGGGGTTCATCGAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPGLAIG*GFIEVL Trigger: CAGAACTTCGATGAACCCTCAGCCTATGGCAAGGCC...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTGGCTCAGGAAAGTCTTaGTGTCCAGGGGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPGSGKS*CPGGCP Trigger: TGGACATCCCCCTGGACAGCAAGACTTTCCTGAGCC...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTACATCAAGTGTGAACTaGTGGTGCCTGGAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPTSSVN*WCLEGP Trigger: GGGACCCTCCAGGCACCAGCAGTTCACACTTGATGT...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGGGCTGGGGGCTCTCTaGCATGAGCGGCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIGLGAL*HERLLW Trigger: CCAGAGGAGCCGCTCATGCCAGAGAGCCCCCAGCCC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTCAGCATCAAAGAAGATaGAAGACATGGGCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRQHQRR*KTWASA Trigger: AGCACTGGCCCATGTCTTCCATCTTCTTTGATGCTG...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTCCTCTCATAGATTTTTaGGTGAATTCATCGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VYVCRGVCVCVCVCARIRPLIDF*VNSSGA Trigger: GGCCCCCGATGAATTCACCCAAAAATCTATGAGAGG...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| 3UTR CAA 72 bp | GATAATAAAGTGAGCATGTCAGATAAAGGCCACTGCTaGGTGACCTGGCCAGTAGGCCAGGTTGAGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: DNKVSMSDKGHC*VTWPVGQVEYI Trigger: GATGTACTCAACCTGGCCTACTGGCCAGGTCACCAAGCAGTGGCCTTTATCTGACATGCTCACTTTATTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTTCCGGCCTCTGTTGGTaGCCGTGCACTTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSSGLCW*PCTSSS Trigger: TGAGGATGAAGTGCACGGTCACCAACAGAGGCCGGA...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR GCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGAGACAGGGACCCTTTaGTCCCAGCATCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKETGTL*SQHQRR Trigger: TCTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTCATGGCCATCAGGTGTaGCTTGAACAGGGATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AEATTQEIKHQHLHVNNPHGHQV*LEQGFG Trigger: ACCGAATCCCTGTTCAAGCCACACCTGATGGCCATG...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGGGCACAGTGAAGGCTaGCAGGCTCCCGGACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIGHSEG*QAPGLA Trigger: AGCGAGTCCGGGAGCCTGCCAGCCTTCACTGTGCCC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAATTAGCTTCAGCTTGTTaGACAGGGCGATCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDCHTAAISQKQKVTREKLASAC*TGRSWL Trigger: CAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAA...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTTGGCATCTCCTGGGGTaGGGGCCAACTGGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIWHLLG*GPTGPV Trigger: AACTGGCCCAGTTGGCCCCCACCCCAGGAGATGCCA...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTCCAAATCCAGTTCACTaGAGTCCGTCTGGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSPNPVH*SPSGYC Trigger: GCAGTACCCAGACGGACTTCAGTGAACTGGATTTGG...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAAGGATGGGTGCTGGATTaGCTCACACATGATGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVELQTEMPLTLRQQGWVLD*LTHDDK Trigger: CTTATCATCATGTGTGAGCCAATCCAGCACCCATCC...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTAACAGGGATTCGGTCTaGTCCATGGAGAACACCACG | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSNRDSV*SMENTT Trigger: CGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTT...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTCTGGTAGATGGTGGCTaGGGAGGTGGCAGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGILVDGG*GGGRCL Trigger: GAGACACCTGCCACCTCCCCAGCCACCATCTACCAG...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTGGGATTCTCCAAGGATaGATAGTAGTCCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSGILQG*IVVLRA Trigger: AGCCCTGAGGACTACTATTCATCCTTGGAGAATCCC...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR GCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTTCCTCATACTCCAGCTaGCGCTTTAGCTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSSSYSS*RFSFSL Trigger: CAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGA...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTATGTGGGATGGGTGCTaGATTGGCTCACACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSMWDGC*IGSHMM Trigger: CATCATGTGTGAGCCAATCCAGCACCCATCCCACAT...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| 3UTR CAA 72 bp | CACGTACATAATACACTGAGAACACGAAAAGATAGCTaGCAATGTTCCCCCTTAATGACTTCTCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVHNTLRTRKDS*QCSPLMTSLLG Trigger: TCCCAGGAGAGAAGTCATTAAGGGGGAACATTGCAAGCTATCTTTTCGTGTTCTCAGTGTATTATGTACGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR TCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGCAGCTACTGCTGCTTaGAGCACTGGGTGTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIAATAA*STGCSV Trigger: AACACTACACCCAGTGCTTCAAGCAGCAGTAGCTGC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTAGAAGATGGAAGACATaGGCCAGTGCTCAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIRRWKT*ASAQTL Trigger: CAGAGTCTGAGCACTGGCCCATGTCTTCCATCTTCT...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | GGCACAGTGAAGGCTGGCAGGCTCCCGGACTCGCTCTGGGCACTGTaGCTCCTCAGCCCCGAGACCCATGGCTGGCCCGGGGGAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTVKAGRLPDSLWAL*LLSPETHGWPGGRM Trigger: CATCCTTCCCCCGGGCCAGCCATGGGTCTCGGGGCTGAGGAGCCACAGTGCCCAGAGCGAGTCCGGGAGCCTGCCAGCCTTCACTGTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | CTGCTGCTTGAAGCACTGGGTGTAGTGTTCCCTGGGGTGTCTGCCTaGGGCACAGTGAAGGCTGGCAGGCTCCCGGACTCGCTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLEALGVVFPGVSA*GTVKAGRLPDSLWA Trigger: TGCCCAGAGCGAGTCCGGGAGCCTGCCAGCCTTCACTGTGCCCCAGGCAGACACCCCAGGGAACACTACACCCAGTGCTTCAAGCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 90 bp | GAACATGGAGACATGAGGCGGGGCGCTCGGAGGTTCCAACTGCGATaGCCCCACCGGCAGGGCTCCCAGGGATTCAGCACTCTGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: EHGDMRRGARRFQLR*PHRQGSQGFSTLIT Trigger: GGTGATCAGAGTGCTGAATCCCTGGGAGCCCTGCCGGTGGGGTCATCGCAGTTGGAACCTCCGAGCGCCCCGCCTCATGTCTCCATGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | TGTGGCTCCTCAGCCCCGAGACCCATGGCTGGCCCGGGGGAAGGATaGCCTTGCCATAGGCTGAGGGTTCATCGAAGTTCTGGCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CGSSAPRPMAGPGEG*PCHRLRVHRSSGFR Trigger: TCGGAAGCCAGAACTTCGATGAACCCTCAGCCTATGGCAAGGCCATCCTTCCCCCGGGCCAGCCATGGGTCTCGGGGCTGAGGAGCCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | AACCCAGTCTTGGCGTTCTCCCCTGAGCTCCTGGTAGATGGTGGCTaGGGAGGTGGCAGGTGTCTCAGTGGCTGGCCCAGGCCTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NPVLAFSPELLVDGG*GGGRCLSGWPRPLI Trigger: TATGAGAGGCCTGGGCCAGCCACTGAGACACCTGCCACCTCCCCAGCCACCATCTACCAGGAGCTCAGGGGAGAACGCCAAGACTGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS GCA 90 bp | TCCTCAGCCCCGAGACCCATGGCTGGCCCGGGGGAAGGATGGCCTTaGCATAGGCTGAGGGTTCATCGAAGTTCTGGCTTCCGAAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSAPRPMAGPGEGWP*HRLRVHRSSGFRNR Trigger: TCGATTTCGGAAGCCAGAACTTCGATGAACCCTCAGCCTATGGCAAGGCCATCCTTCCCCCGGGCCAGCCATGGGTCTCGGGGCTGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS GCA 90 bp | GCAGGGGCAACTCATGAGCCAACTCATAGAAGACCTCCGTCTCCTTaGTGCGCCGGCACCTCGCGGCATCACGGGATTTCTCCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGATHEPTHRRPPSP*CAGTSRHHGISPSS Trigger: TGAGGAAGGAGAAATCCCGTGATGCCGCGAGGTGCCGGCGCAGCAAGGAGACGGAGGTCTTCTATGAGTTGGCTCATGAGTTGCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS GCA 90 bp | GAAGACATGGGCCAGTGCTCAGACTCTGTCTTCCTGCTTTCCAACTaGTGCGGGTACTTATCGAGGAAGAAGGGGCCGTGGGTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: EDMGQCSDSVFLLSN*CGYLSRKKGPWVAP Trigger: GGGGGCCACCCACGGCCCCTTCTTCCTCGATAAGTACCCGCAGCAGTTGGAAAGCAGGAAGACAGAGTCTGAGCACTGGCCCATGTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS GCA 90 bp | GGCCACTTAGTAGGGCCGAAATGTAATGGTGGATCCGGGGGCCACTaGGTGTTGGATCTGCCTCCCATAGAAGAGAGAGGGGTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLVGPKCNGGSGGH*VLDLPPIEERGVLA Trigger: GGCCAGCACCCCTCTCTCTTCTATGGGAGGCAGATCCAACACGCAGTGGCCCCCGGATCCACCATTACATTTCGGCCCTACTAAGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 90 bp | TCATGTATGGACCTCGGGCCCCGAAGTCCTTTGCAGACCTCATCTTaGACATGGAGACATGAGGCGGGGCGCTCGGAGGTTCCAACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SCMDLGPRSPLQTSS*TWRHEAGRSEVPTA Trigger: CGCAGTTGGAACCTCCGAGCGCCCCGCCTCATGTCTCCATGTTCAAGATGAGGTCTGCAAAGGACTTCGGGGCCCGAGGTCCATACATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS GCA 90 bp | AGAGAGGGGTGCTGGCCTGGCCACAGCATGGAGACAGGGACCCTTTaGTCCCAGCATCAAAGAAGATGGAAGACATGGGCCAGTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: REGCWPGHSMETGTL*SQHQRRWKTWASAQ Trigger: CTGAGCACTGGCCCATGTCTTCCATCTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTCCATGCTGTGGCCAGGCCAGCACCCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | TGCGTGTTGGATCTGCCTCCCATAGAAGAGAGAGGGGTGCTGGCCTaGCCACAGCATGGAGACAGGGACCCTTTGCTCCCAGCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVLDLPPIEERGVLA*PQHGDRDPLLPASK Trigger: CTTTGATGCTGGGAGCAAAGGGTCCCTGTCTCCATGCTGTGGCCAGGCCAGCACCCCTCTCTCTTCTATGGGAGGCAGATCCAACACGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGAAGACCTCCGTCTCCTaGCTGCGCCGGCACCTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RYLIATQMEVKLAGQDGGKTSVS*LRRHLA Trigger: CGCGAGGTGCCGGCGCAGCAAGGAGACGGAGGTCTT...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 90 bp | TGGGGGCCAACTGGGCCAGTTCCTCGGGCTCCTCCTTCAGTTTGGTaGACAGGTAGTTGCTCTTCTCAGTTACAGCCACATCGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGPTGPVPRAPPSVW*TGSCSSQLQPHRHC Trigger: GCAGTGACGATGTGGCTGTAACTGAGAAGAGCAACTACCTGTTCACCAAACTGAAGGAGGAGCCCGAGGAACTGGCCCAGTTGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | AGTCTTGCTGTCCAGGGGGATGTCCATGTGGGATGGGTGCTGGATTaGCTCACACATGATGATAAGGCAGGACAGCAGGGGCTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLAVQGDVHVGWVLD*LTHDDKAGQQGLLG Trigger: TCCAAGGAGCCCCTGCTGTCCTGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGACAGCAAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | AGGAAAGTCTTGCTGTCCAGGGGGATGTCCATGTGGGATGGGTGCTaGATTGGCTCACACATGATGATAAGGCAGGACAGCAGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKVLLSRGMSMWDGC*IGSHMMIRQDSRGS Trigger: GGAGCCCCTGCTGTCCTGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGACAGCAAGACTTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | ATCGAAGTTCTGGCTTCCGAAATCGAGAGAAATAATGGCATCTCCTaGGGTGGGGGCCAACTGGGCCAGTTCCTCGGGCTCCTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IEVLASEIERNNGIS*GGGQLGQFLGLLLQ Trigger: CTGAAGGAGGAGCCCGAGGAACTGGCCCAGTTGGCCCCCACCCCAGGAGATGCCATTATTTCTCTCGATTTCGGAAGCCAGAACTTCGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 90 bp | CGAGACCCATGGCTGGCCCGGGGGAAGGATGGCCTTGCCATAGGCTaGGGGTTCATCGAAGTTCTGGCTTCCGAAATCGAGAGAAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: RDPWLARGKDGLAIG*GFIEVLASEIERNN Trigger: ATTATTTCTCTCGATTTCGGAAGCCAGAACTTCGATGAACCCTCAGCCTATGGCAAGGCCATCCTTCCCCCGGGCCAGCCATGGGTCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | GGTGGCAGGTGTCTCAGTGGCTGGCCCAGGCCTCTCATAGATTTTTaGGTGAATTCATCGGGGGCCATGTTCGCACTGATGGTCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRCLSGWPRPLIDF*VNSSGAMFALMVLS Trigger: TGACAAGACCATCAGTGCGAACATGGCCCCCGATGAATTCACCCAAAAATCTATGAGAGGCCTGGGCCAGCCACTGAGACACCTGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGGTGGCCGACTTGAGGTaGACAGTCCGGCCTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RYLIATQMEVKLAGQDGGVADLR*TVRPLL Trigger: CAACAGAGGCCGGACTGTCAACCTCAAGTCGGCCAC...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATATTCCAGGTGGCCGACTaGAGGTTGACAGTCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQSFPRERHQPPCLLVWIFQVAD*RLTVRP Trigger: AGGCCGGACTGTCAACCTCAAGTCGGCCACCTGGAA...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 90 bp | CTTCAGCTTGTTGGACAGGGCGATCATGGCTGGGCTCATCATGTATaGACCTCGGGCCCCGAAGTCCTTTGCAGACCTCATCTTGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LQLVGQGDHGWAHHV*TSGPEVLCRPHLEH Trigger: ATGTTCAAGATGAGGTCTGCAAAGGACTTCGGGGCCCGAGGTCCATACATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CAA 90 bp | AGATACCTAATAGCAACACAGATGGAAGTGAAGCTGGCAGGTCAAGACGGCGGGGCCATCAGGTGTGGCTaGAACAGGGATTCGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RYLIATQMEVKLAGQDGGAIRCG*NRDSVW Trigger: CCAGACCGAATCCCTGTTCAAGCCACACCTGATGGC...CCCGCCGTCTTGACCTGCCAGCTTCACTTCCATCTGTGTTGCTATTAGGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS TCA 90 bp | CGTCACTGCTGTCAAAGATGCTGTTCATGGCCATCAGGTGTGGCTTaGACAGGGATTCGGTCTGGTCCATGGAGAACACCACGTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHCCQRCCSWPSGVA*TGIRSGPWRTPRRS Trigger: AGAACGACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACAGCAGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 90 bp | CAAAGAAGATGGAAGACATGGGCCAGTGCTCAGACTCTGTCTTCCTaGTTTCCAACTGCTGCGGGTACTTATCGAGGAAGAAGGGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRRWKTWASAQTLSS*FPTAAGTYRGRRGR Trigger: ACGGCCCCTTCTTCCTCGATAAGTACCCGCAGCAGTTGGAAAGCAGGAAGACAGAGTCTGAGCACTGGCCCATGTCTTCCATCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | GGCCAGATACCACCTGCCCCTTGGTGCACAAGTTCTGGTGACTTTTaGTCATGTTCTCCGAATCCAGGGCATGGTAGAACTCATAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQIPPAPWCTSSGDF*SCSPNPGHGRTHRQ Trigger: CTGCCTATGAGTTCTACCATGCCCTGGATTCGGAGAACATGACCAAAAGTCACCAGAACTTGTGCACCAAGGGGCAGGTGGTATCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | ATGCTGTTCATGGCCATCAGGTGTGGCTTGAACAGGGATTCGGTCTaGTCCATGGAGAACACCACGTCGTTCTTCTCGATCTCACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLFMAIRCGLNRDSV*SMENTTSFFSISLS Trigger: GCTGAGTGAGATCGAGAAGAACGACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | CACATCGTCACTGCTGTCAAAGATGCTGTTCATGGCCATCAGGTGTaGCTTGAACAGGGATTCGGTCTGGTCCATGGAGAACACCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: HIVTAVKDAVHGHQV*LEQGFGLVHGEHHV Trigger: GACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACAGCAGTGACGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | CACAGCATGGAGACAGGGACCCTTTGCTCCCAGCATCAAAGAAGATaGAAGACATGGGCCAGTGCTCAGACTCTGTCTTCCTGCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSMETGTLCSQHQRR*KTWASAQTLSSCFP Trigger: TGGAAAGCAGGAAGACAGAGTCTGAGCACTGGCCCATGTCTTCCATCTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTCCATGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CAA 90 bp | GTATATGTGTGTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATACGTGGAGACAGGGACCCTTaGCTCCCAGCATCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VYVCRGVCVCVCVCARIRGDRDP*LPASKK Trigger: CTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTCC...ACGTATGCGTGCACACACACACACACACACACACACACCCCTACACACATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CAA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGGGGGCCACTGCGTGTaGGATCTGCCTCCCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WDCHTAAISQKQKVTREKGGHCV*DLPPIE Trigger: TTCTATGGGAGGCAGATCCAACACGCAGTGGCCCCC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CAA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAACGGCTCAGGAAAGTCTaGCTGTCCAGGGGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSLVELQTEMPLTLRQQRLRKV*LSRGMS Trigger: GGACATCCCCCTGGACAGCAAGACTTTCCTGAGCCG...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS-3UTR CAA 90 bp | CGCCAAAGCTTTCCTAGGGAGAGGCACCAGCCACCATGCTTGTTAGTATGGATAGTAAGTCCCATGAACTaGCTGATGTTTTCCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RQSFPRERHQPPCLLVWIVSPMN*LMFSDR Trigger: TCTGTCGGAAAACATCAGCAAGTTCATGGGACTTAC...TATCCATACTAACAAGCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 90 bp | GCAATGAAACCCTCCAAGGCTTTCAGGTACAAGTTATCCATTTGCTaGTCGGCCTCAGCTTCAGATTCATTTTCAGAGCAGACTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AMKPSKAFRYKLSIC*SASASDSFSEQTED Trigger: GTCCTCAGTCTGCTCTGAAAATGAATCTGAAGCTGAGGCCGACCAGCAAATGGATAACTTGTACCTGAAAGCCTTGGAGGGTTTCATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | TGGGACTGTCACACCGCTGCCATATCACAAAAGCAAAAAGTCACCAGAGAGAAAGATCATGTCACCGTCTaGGGTCACCACAGCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: WDCHTAAISQKQKVTREKDHVTV*GHHSNE Trigger: TTCATTGCTGTGGTGACCCAAGACGGTGACATGATC...TTTCTCTCTGGTGACTTTTTGCTTTTGTGATATGGCAGCGGTGTGACAGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | GCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTCAAGTACAGTCCGGCCTCTGTaGGTGACCGTGCACTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ATTQEIKHQHLHVNNPSSTVRPL*VTVHFI Trigger: GATGAAGTGCACGGTCACCAACAGAGGCCGGACTGT...ACTTGAAGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | CATTTCCTTATAAAGTTAAGCTCCCGTACAGTTATAATGTCGTCAGTAGGAATTGGCGGGAACCCAGTCTaGGCGTTCTCCCCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLIKLSSRTVIMSSVGIGGNPV*AFSPEL Trigger: GAGCTCAGGGGAGAACGCCAAGACTGGGTTCCCGCC...AATTCCTACTGACGACATTATAACTGTACGGGAGCTTAACTTTATAAGGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTCTTTAGTAGAACTGCAAACGGAAATGCCCTTAACGCTGAGGCAACAATCGGTGGACACGTCTTaGCTCTTCTTCCCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: RVSLVELQTEMPLTLRQQSVDTS*LFFPKP Trigger: TGGTTTTGGGAAGAAGAGCAAAGACGTGTCCACCGA...TTGTTGCCTCAGCGTTAAGGGCATTTCCGTTTGCAGTTCTACTAAAGACACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGCAACAACACAGGAAATCAAACACCAGCATTTGCATGTCAATAACCCTTTCGCACTGATGGTCTaGTCAGGCATCAAAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AEATTQEIKHQHLHVNNPFALMV*SGIKGQ Trigger: CTGTCCTTTGATGCCTGACAAGACCATCAGTGCGAA...AGGGTTATTGACATGCAAATGCTGGTGTTTGATTTCCTGTGTTGTTGCCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 72 bp | AAGGCTGGCAGGCTCCCGGACTCGCTCTGGGCACTGTaGCTCCTCAGCCCCGAGACCCATGGCTGGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KAGRLPDSLWAL*LLSPETHGWPG Trigger: CCCGGGCCAGCCATGGGTCTCGGGGCTGAGGAGCCACAGTGCCCAGAGCGAGTCCGGGAGCCTGCCAGCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 72 bp | GGCACAGTGAAGGCTGGCAGGCTCCCGGACTCGCTCTaGGCACTGTGGCTCCTCAGCCCCGAGACCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTVKAGRLPDSL*ALWLLSPETHG Trigger: GCCATGGGTCTCGGGGCTGAGGAGCCACAGTGCCCAGAGCGAGTCCGGGAGCCTGCCAGCCTTCACTGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 72 bp | GGTGGGCTGGGGGCTCTCTGGCATGAGCGGCTCCTCTaGGCAGATGGGGCTCAGCTGGAAGTCCTCGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGLGALWHERLL*ADGAQLEVLAV Trigger: GACGGCGAGGACTTCCAGCTGAGCCCCATCTGCCCAGAGGAGCCGCTCATGCCAGAGAGCCCCCAGCCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 72 bp | GCACTGTGGCGGGAACCCAGTCTTGGCGTTCTCCCCTaGGCTCCTGGTAGATGGTGGCTGGGGAGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALWREPSLGVLP*APGRWWLGRWQ Trigger: CTGCCACCTCCCCAGCCACCATCTACCAGGAGCTCAGGGGAGAACGCCAAGACTGGGTTCCCGCCACAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 72 bp | TTGGCGTTCTCCCCTGAGCTCCTGGTAGATGGTGGCTaGGGAGGTGGCAGGTGTCTCAGTGGCTGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAFSPELLVDGG*GGGRCLSGWPR Trigger: CCTGGGCCAGCCACTGAGACACCTGCCACCTCCCCAGCCACCATCTACCAGGAGCTCAGGGGAGAACGCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS CCA 72 bp | GATCTGCCTCCCATAGAAGAGAGAGGGGTGCTGGCCTaGCCACAGCATGGAGACAGGGACCCTTTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DLPPIEERGVLA*PQHGDRDPLLP Trigger: TGGGAGCAAAGGGTCCCTGTCTCCATGCTGTGGCCAGGCCAGCACCCCTCTCTCTTCTATGGGAGGCAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
||
| CDS TCA 72 bp | GGATGTAGGGTGCCAAGGTCTCCAAATCCAGTTCACTaGAGTCCGTCTGGGTACTGCCCGGGTCCCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRVPRSPNPVH*SPSGYCPGPSA Trigger: AGCCGAGGGACCCGGGCAGTACCCAGACGGACTTCAGTGAACTGGATTTGGAGACCTTGGCACCCTACATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | TCCCCTGGGTCTCCAGCCACACATATCCTCCGTGTTTaGCTAGCATCCGGTACTGGCCAGATACCACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPGSPATHILRV*LASGTGQIPPA Trigger: GGCAGGTGGTATCTGGCCAGTACCGGATGCTAGCCAAACACGGAGGATATGTGTGGCTGGAGACCCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CTGGCTTCCGAAATCGAGAGAAATAATGGCATCTCCTaGGGTGGGGGCCAACTGGGCCAGTTCCTCGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LASEIERNNGIS*GGGQLGQFLGL Trigger: GAGCCCGAGGAACTGGCCCAGTTGGCCCCCACCCCAGGAGATGCCATTATTTCTCTCGATTTCGGAAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | GTCCCCTGGGTCTCCAGCCACACATATCCTCCGTGTTaGGCTAGCATCCGGTACTGGCCAGATACCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPWVSSHTYPPC*ASIRYWPDTTC Trigger: GCAGGTGGTATCTGGCCAGTACCGGATGCTAGCCAAACACGGAGGATATGTGTGGCTGGAGACCCAGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | GAGAGAGGGGTGCTGGCCTGGCCACAGCATGGAGACAGGGACCCTTaGCTCCCAGCATCAAAGAAGATGGAAGACATGGGCCAGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ERGVLAWPQHGDRDP*LPASKKMEDMGQCS Trigger: TGAGCACTGGCCCATGTCTTCCATCTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTCCATGCTGTGGCCAGGCCAGCACCCCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | TTAGTAGGGCCGAAATGTAATGGTGGATCCGGGGGCCACTGCGTGTaGGATCTGCCTCCCATAGAAGAGAGAGGGGTGCTGGCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVGPKCNGGSGGHCV*DLPPIEERGVLAWP Trigger: TGGCCAGGCCAGCACCCCTCTCTCTTCTATGGGAGGCAGATCCAACACGCAGTGGCCCCCGGATCCACCATTACATTTCGGCCCTACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | GGCCAGTGCTCAGACTCTGTCTTCCTGCTTTCCAACTaGTGCGGGTACTTATCGAGGAAGAAGGGGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GQCSDSVFLLSN*CGYLSRKKGPW Trigger: CCACGGCCCCTTCTTCCTCGATAAGTACCCGCAGCAGTTGGAAAGCAGGAAGACAGAGTCTGAGCACTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | GTAGGGCCGAAATGTAATGGTGGATCCGGGGGCCACTaGGTGTTGGATCTGCCTCCCATAGAAGAGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGPKCNGGSGGH*VLDLPPIEERG Trigger: CCCTCTCTCTTCTATGGGAGGCAGATCCAACACGCAGTGGCCCCCGGATCCACCATTACATTTCGGCCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | GTCCAGGGGGATGTCCATGTGGGATGGGTGCTGGATTaGCTCACACATGATGATAAGGCAGGACAGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: VQGDVHVGWVLD*LTHDDKAGQQG Trigger: CCCCTGCTGTCCTGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | AGAGAAATAATGGCATCTCCTGGGGTGGGGGCCAACTaGGCCAGTTCCTCGGGCTCCTCCTTCAGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: REIMASPGVGAN*ASSSGSSFSLV Trigger: CACCAAACTGAAGGAGGAGCCCGAGGAACTGGCCCAGTTGGCCCCCACCCCAGGAGATGCCATTATTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | GTTGGACAGGGCGATCATGGCTGGGCTCATCATGTATaGACCTCGGGCCCCGAAGTCCTTTGCAGACCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGQGDHGWAHHV*TSGPEVLCRPH Trigger: ATGAGGTCTGCAAAGGACTTCGGGGCCCGAGGTCCATACATGATGAGCCCAGCCATGATCGCCCTGTCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | CCGAAATGTAATGGTGGATCCGGGGGCCACTGCGTGTaGGATCTGCCTCCCATAGAAGAGAGAGGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKCNGGSGGHCV*DLPPIEERGVL Trigger: CAGCACCCCTCTCTCTTCTATGGGAGGCAGATCCAACACGCAGTGGCCCCCGGATCCACCATTACATTTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | AAGGCTTGCTCCTCATACTCCAGCTGCCGCTTTAGCTTCAGCTTGTaGGACAGGGCGATCATGGCTGGGCTCATCATGTATGGACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KACSSYSSCRFSFSL*DRAIMAGLIMYGPR Trigger: CCGAGGTCCATACATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGAGCAAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | AGGTGGCAGGTGTCTCAGTGGCTGGCCCAGGCCTCTCATAGATTTTaGGGTGAATTCATCGGGGGCCATGTTCGCACTGATGGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RWQVSQWLAQASHRF*GEFIGGHVRTDGLV Trigger: GACAAGACCATCAGTGCGAACATGGCCCCCGATGAATTCACCCAAAAATCTATGAGAGGCCTGGGCCAGCCACTGAGACACCTGCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | GTCTTGCTGTCCAGGGGGATGTCCATGTGGGATGGGTaGTGGATTGGCTCACACATGATGATAAGGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLLSRGMSMWDG*WIGSHMMIRQD Trigger: GTCCTGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGACAGCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | AGGGATTCTCCAAGGATGAATAGTAGTCCTCAGGGCTaGTGGGCGTGGAGCAGCTACTGCTGCTTGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RDSPRMNSSPQG*WAWSSYCCLKH Trigger: GTGCTTCAAGCAGCAGTAGCTGCTCCACGCCCAGCAGCCCTGAGGACTACTATTCATCCTTGGAGAATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | TTGCTGTCCAGGGGGATGTCCATGTGGGATGGGTGCTaGATTGGCTCACACATGATGATAAGGCAGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSRGMSMWDGC*IGSHMMIRQDS Trigger: GCTGTCCTGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGACAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CACACATATCCTCCGTGTTTGGCTAGCATCCGGTACTaGCCAGATACCACCTGCCCCTTGGTGCACAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTYPPCLASIRY*PDTTCPLVHKF Trigger: GAACTTGTGCACCAAGGGGCAGGTGGTATCTGGCCAGTACCGGATGCTAGCCAAACACGGAGGATATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | TGCTCCTCATACTCCAGCTGCCGCTTTAGCTTCAGCTaGTTGGACAGGGCGATCATGGCTGGGCTCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: CSSYSSCRFSFS*LDRAIMAGLIM Trigger: CATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | TGGAAGGCTTGCTCCTCATACTCCAGCTGCCGCTTTAGCTTCAGCTaGTTGGACAGGGCGATCATGGCTGGGCTCATCATGTATGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: WKACSSYSSCRFSFS*LDRAIMAGLIMYGP Trigger: AGGTCCATACATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGAGCAAGCCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS TCA 72 bp | CCAGATACCACCTGCCCCTTGGTGCACAAGTTCTGGTaGCTTTTGGTCATGTTCTCCGAATCCAGGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PDTTCPLVHKFW*LLVMFSESRAW Trigger: CCATGCCCTGGATTCGGAGAACATGACCAAAAGTCACCAGAACTTGTGCACCAAGGGGCAGGTGGTATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | CTTGTGTCTTGGAAGGCTTGCTCCTCATACTCCAGCTaGCGCTTTAGCTTCAGCTTGTTGGACAGGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LVSWKACSSYSS*RFSFSLLDRAI Trigger: GATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGAGCAAGCCTTCCAAGACACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | ATGGCCATCAGGTGTGGCTTGAACAGGGATTCGGTCTaGTCCATGGAGAACACCACGTCGTTCTTCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: MAIRCGLNRDSV*SMENTTSFFSI Trigger: GATCGAGAAGAACGACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | GAGACAGGGACCCTTTGCTCCCAGCATCAAAGAAGATaGAAGACATGGGCCAGTGCTCAGACTCTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETGTLCSQHQRR*KTWASAQTLSS Trigger: GGAAGACAGAGTCTGAGCACTGGCCCATGTCTTCCATCTTCTTTGATGCTGGGAGCAAAGGGTCCCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CCTCATACTCCAGCTGCCGCTTTAGCTTCAGCTTGTTaGACAGGGCGATCATGGCTGGGCTCATCATGTATG | + |
|
Preference number: 6 (lower is better) Translates to: PHTPAAALASAC*TGRSWLGSSCM Trigger: CATACATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | TGTCTCAGTGGCTGGCCCAGGCCTCTCATAGATTTTTaGGTGAATTCATCGGGGGCCATGTTCGCACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CLSGWPRPLIDF*VNSSGAMFALM Trigger: CATCAGTGCGAACATGGCCCCCGATGAATTCACCCAAAAATCTATGAGAGGCCTGGGCCAGCCACTGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | GTGTCTCAGTGGCTGGCCCAGGCCTCTCATAGATTTTaGGGTGAATTCATCGGGGGCCATGTTCGCACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSQWLAQASHRF*GEFIGGHVRTD Trigger: ATCAGTGCGAACATGGCCCCCGATGAATTCACCCAAAAATCTATGAGAGGCCTGGGCCAGCCACTGAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 90 bp | TCGTCACTGCTGTCAAAGATGCTGTTCATGGCCATCAGGTGTGGCTaGAACAGGGATTCGGTCTGGTCCATGGAGAACACCACGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSKMLFMAIRCG*NRDSVWSMENTTSF Trigger: GAACGACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACAGCAGTGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS TCA 72 bp | ACTGGGCCAGTTCCTCGGGCTCCTCCTTCAGTTTGGTaGACAGGTAGTTGCTCTTCTCAGTTACAGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: TGPVPRAPPSVW*TGSCSSQLQPH Trigger: ATGTGGCTGTAACTGAGAAGAGCAACTACCTGTTCACCAAACTGAAGGAGGAGCCCGAGGAACTGGCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | GAAAGTCTTGCTGTCCAGGGGGATGTCCATGTGGGATaGGTGCTGGATTGGCTCACACATGATGATAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESLAVQGDVHVG*VLDWLTHDDKA Trigger: TGCCTTATCATCATGTGTGAGCCAATCCAGCACCCATCCCACATGGACATCCCCCTGGACAGCAAGACTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CCACCTGCCCCTTGGTGCACAAGTTCTGGTGACTTTTaGTCATGTTCTCCGAATCCAGGGCATGGTAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PPAPWCTSSGDF*SCSPNPGHGRT Trigger: AGTTCTACCATGCCCTGGATTCGGAGAACATGACCAAAAGTCACCAGAACTTGTGCACCAAGGGGCAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | CTGTCAAAGATGCTGTTCATGGCCATCAGGTGTGGCTaGAACAGGGATTCGGTCTGGTCCATGGAGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: LSKMLFMAIRCG*NRDSVWSMENT Trigger: GGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | TCCTCATACTCCAGCTGCCGCTTTAGCTTCAGCTTGTaGGACAGGGCGATCATGGCTGGGCTCATCATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSYSSCRFSFSL*DRAIMAGLIMY Trigger: ATACATGATGAGCCCAGCCATGATCGCCCTGTCCAACAAGCTGAAGCTAAAGCGGCAGCTGGAGTATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS TCA 72 bp | TGTCAAAGATGCTGTTCATGGCCATCAGGTGTGGCTTaGACAGGGATTCGGTCTGGTCCATGGAGAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: CQRCCSWPSGVA*TGIRSGPWRTP Trigger: TGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | ACTGCTGTCAAAGATGCTGTTCATGGCCATCAGGTGTaGCTTGAACAGGGATTCGGTCTGGTCCATGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TAVKDAVHGHQV*LEQGFGLVHGE Trigger: TTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCACACCTGATGGCCATGAACAGCATCTTTGACAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | GGTAGTTGCTCTTCTCAGTTACAGCCACATCGTCACTaGTGTCAAAGATGCTGTTCATGGCCATCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSCSSQLQPHRH*CQRCCSWPSGV Trigger: CACACCTGATGGCCATGAACAGCATCTTTGACAGCAGTGACGATGTGGCTGTAACTGAGAAGAGCAACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CCCTCCAAGGCTTTCAGGTACAAGTTATCCATTTGCTaGTCGGCCTCAGCTTCAGATTCATTTTCAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSKAFRYKLSIC*SASASDSFSEQ Trigger: CTGCTCTGAAAATGAATCTGAAGCTGAGGCCGACCAGCAAATGGATAACTTGTACCTGAAAGCCTTGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CCA 72 bp | CTGATGTTTTCCGACAGAAAGATCATGTCACCGTCTTaGGTCACCACAGCAATGAAACCCTCCAAGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LMFSDRKIMSPS*VTTAMKPSKAF Trigger: GAAAGCCTTGGAGGGTTTCATTGCTGTGGTGACCCAAGACGGTGACATGATCTTTCTGTCGGAAAACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | GCTGATGTTTTCCGACAGAAAGATCATGTCACCGTCTaGGGTCACCACAGCAATGAAACCCTCCAAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ADVFRQKDHVTV*GHHSNETLQGF Trigger: AAAGCCTTGGAGGGTTTCATTGCTGTGGTGACCCAAGACGGTGACATGATCTTTCTGTCGGAAAACATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | ATCCTCATGAAGAAGTCACGCTCGGTGGACACGTCTTaGCTCTTCTTCCCAAAACCAGAGCCGTTTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILMKKSRSVDTS*LFFPKPEPFLR Trigger: TCTCAAAAACGGCTCTGGTTTTGGGAAGAAGAGCAAAGACGTGTCCACCGAGCGTGACTTCTTCATGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS GCA 72 bp | AAACCCTCCAAGGCTTTCAGGTACAAGTTATCCATTTaGTGGTCGGCCTCAGCTTCAGATTCATTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KPSKAFRYKLSI*WSASASDSFSE Trigger: CTCTGAAAATGAATCTGAAGCTGAGGCCGACCAGCAAATGGATAACTTGTACCTGAAAGCCTTGGAGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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| CDS CAA 72 bp | GAAACCCTCCAAGGCTTTCAGGTACAAGTTATCCATTaGCTGGTCGGCCTCAGCTTCAGATTCATTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETLQGFQVQVIH*LVGLSFRFIFR Trigger: TCTGAAAATGAATCTGAAGCTGAGGCCGACCAGCAAATGGATAACTTGTACCTGAAAGCCTTGGAGGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024954.11 |
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