Pregenerated sensors for EMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030208Ensembl transcript IDs: ENSMUST00000032330.16, ENSMUST00000111907.2, ENSMUST00000154270.8, ENSMUST00000205156.3
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATaGCAGCTGGGGAGGCCCCGAGTGTATGTAATTGAGGATGGACGG | + |
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Preference number: 1 (lower is better) Translates to: QCVTQQPPSRVAPVV*QLGRPRVYVIEDGR Trigger: CCGTCCATCCTCAATTACATACACTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR TCA 90 bp | AAGTTCACAATAGGAGGCCTCCATGTGGGACAGCTCGGTGACACGTaGCTGAGGAGCACTGCCTGTCCCCACCTGTCTCCAAGATCCTCT | + |
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Preference number: 1 (lower is better) Translates to: KFTIGGLHVGQLGDT*LRSTACPHLSPRSS Trigger: AGAGGATCTTGGAGACAGGTGGGGACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACATGGAGGCCTCCTATTGTGAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR GCA 90 bp | GGAGATGATGGAGAAGATGATGGAGAGGATCATGAAGGCTTGCACTaGCTTGATAGCATCTTCATTGCCGTAGGACAGGGAGCCGTCGCA | + |
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Preference number: 1 (lower is better) Translates to: GDDGEDDGEDHEGLH*LDSIFIAVGQGAVA Trigger: TGCGACGGCTCCCTGTCCTACGGCAATGAAGATGCTATCAAGGCAGTGCAAGCCTTCATGATCCTCTCCATCATCTTCTCCATCATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR GCA 90 bp | AGGAAGCATCAGCATATCAGCCAACAACTTTCTTCCAAGGATGGGTaGTTGGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RKHQHISQQLSSKDG*LAVENPTAPDMVWV Trigger: AACCCAAACCATATCTGGGGCGGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGTTGTTGGCTGATATGCTGATGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CCA 90 bp | GTCAAGGAAGCATCAGCATATCAGCCAACAACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: VKEASAYQPTTFFQG*VLGSRESHRPRYGL Trigger: CAAACCATATCTGGGGCGGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGTTGTTGGCTGATATGCTGATGCTTCCTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR TCA 90 bp | GCTTCCTGGCCAAAGCTCCCACTACAGGCACATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCACAAGGACAAAGTGGCTTCCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: ASWPKLPLQAHGIWI*CLFLGHKDKVASRL Trigger: AAGTCTGGAAGCCACTTTGTCCTTGTGACCTAAAAACAAACATCAAATCCAGATCCCATGTGCCTGTAGTGGGAGCTTTGGCCAGGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR TCA 90 bp | CTAGAGAATCTAGAAAAACTCCAGAAAAGCTGCCTTGGCTGTAAGTaGGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCATGTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: LENLEKLQKSCLGCK*ESSKVHNRRPPCGT Trigger: TGTCCCACATGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTACAGCCAAGGCAGCTTTTCTGGAGTTTTTCTAGATTCTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CCA 90 bp | CCCCACCTGTCTCCAAGATCCTCTGGGGTAGAAACTTCCATTTCTTaGCTAAACCAATTCCATCAGCTTGAACTTACAAACCATCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PHLSPRSSGVETSIS*LNQFHQLELTNHLS Trigger: AGAGAGATGGTTTGTAAGTTCAAGCTGATGGAATTGGTTTAGCCAAGAAATGGAAGTTTCTACCCCAGAGGATCTTGGAGACAGGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAGGCCCCGAGCAGCATGGTGGACCCTaGGAGGAAGAACCGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSHPQEWRQWYGSWGGPEQHGGP*EEEPVS Trigger: GGAAACCGGTTCTTCCTCTCAGGGTCCACCATGCTG...CTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR-3UTR CCA 90 bp | GGATGGACGGGGCCATATTTGGTGGCTAGAGGAGGACTCTCTGGTGACGTCAAGGTGGCGCCAGTGGTATaGCAGCTGGGGAGGCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GWTGPYLVARGGLSGDVKVAPVV*QLGRPR Trigger: TCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCAC...CTTGACGTCACCAGAGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTACAGCTCGGTGACACGTaGCTGAGGAGCACTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GRPQCVTQQPPSRVAPVVQLGDT*LRSTAC Trigger: ACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTG...TACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTGGGTTTGGGCCTCTCCCCCCCTCCCAGGTTAGGTTaGTTCCTCCTACCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSRESHRPRYGLGLGLSPPPRLG*FLLPSP Trigger: TGGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGG...GGGGGAGAGGCCCAAACCCAAACCATATCTGGGGCGGTGGGATTCTCTACTGCC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGGATATGGTTTGGGTTTaGGCCTCTCCCCCTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CVTQQPPSRVAPVVWQLGDMVWV*ASPPLP Trigger: AGGAAGAGGGGGAGAGGCCCAAACCCAAACCATATC...CCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAGGCCCCGAGGTCACAAGGACAAAGTaGCTTCCAGACTTAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSHPQEWRQWYGSWGGPEVTRTK*LPDLAS Trigger: TGAGGCTAAGTCTGGAAGCCACTTTGTCCTTGTGAC...CTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAGGCCCCGAGGTCTCCAAGATCCTCTaGGGTAGAAACTTCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: SSHPQEWRQWYGSWGGPEVSKIL*GRNFHF Trigger: GAAATGGAAGTTTCTACCCCAGAGGATCTTGGAGAC...CTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTACCGAGTGTATGTAATTaGGGATGGACGGGGCCATAT | + |
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Preference number: 2 (lower is better) Translates to: GRPQCVTQQPPSRVAPVVPSVCN*GWTGPY Trigger: ATATGGCCCCGTCCATCCTCAATTACATACACTCGG...TACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | GGATGGACGGGGCCATATTTGGTGGCTAGAGGAGGACTCTCTGGTGACGTCAAGCCGAGTGTATGTAATTaGGGATGGACGGGGCCATAT | + |
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Preference number: 2 (lower is better) Translates to: GWTGPYLVARGGLSGDVKPSVCN*GWTGPY Trigger: ATATGGCCCCGTCCATCCTCAATTACATACACTCGG...CTTGACGTCACCAGAGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACGTGGCGCCAGTGGTATaGCAGCTGGGGAGGCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDVAPVV*QLGRPR Trigger: TCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCAC...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCGGCAGTTCAGTAACCTACCTTGAACAGTCCCTTAAACATAATATGCTAGTGGCGCCAGTGGTATaGCAGCTGGGGAGGCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: QPGSSVTYLEQSLKHNMLVAPVV*QLGRPR Trigger: TCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCAC...TAGCATATTATGTTTAAGGGACTGTTCAAGGTAGGTTACTGAACTGCCGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACCTACACAGTGACTCCTaGTTCCCTCCCAGGTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KATKYAHWLPGQSSHYRHLHSDS*FPPRLG Trigger: ACCTAACCTGGGAGGGAAGCAGGAGTCACTGTGTAG...GTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGAATACCCCTGCAGCCCCAACAATTTAGCTACCATCTGTCTGGATGCCCCACCGCCCCAGATATaGTTTGGGTTTGGGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IQEYPCSPNNLATICLDAPPPQI*FGFGPL Trigger: GAGAGGCCCAAACCCAAACCATATCTGGGGCGGTGG...GGCATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGGACGGGGCCATATTTGGTGGCTAGAGGAGGACTCTCTGGTGACGTCAAGGTCACAAGGACAAAGTaGCTTCCAGACTTAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GWTGPYLVARGGLSGDVKVTRTK*LPDLAS Trigger: TGAGGCTAAGTCTGGAAGCCACTTTGTCCTTGTGAC...CTTGACGTCACCAGAGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGGACGGGGCCATATTTGGTGGCTAGAGGAGGACTCTCTGGTGACGTCAAGACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GWTGPYLVARGGLSGDVKTFFQG*VLGSRE Trigger: TTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGT...CTTGACGTCACCAGAGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGAGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCATGTGGGACAGCTCGGACGGGGCCATATTTaGTGGCTAGAGGAGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: VSESLAKFTIGGLHVGQLGRGHI*WLEEDS Trigger: AGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCC...GAGCTGTCCCACATGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGAATACCCCTGCAGCCCCAACAATTTAGCTACCATCTGTCTGGATGCCGGACGGGGCCATATTTaGTGGCTAGAGGAGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: IQEYPCSPNNLATICLDAGRGHI*WLEEDS Trigger: AGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCC...GGCATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTGGGTTTGGGCCTCTCCCCCTTGATAATATGGATGTaGAAGACCTCAGTGTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSRESHRPRYGLGLGLSPLIIWM*KTSVCD Trigger: GTCACACACTGAGGTCTTCCACATCCATATTATCAA...GGGGGAGAGGCCCAAACCCAAACCATATCTGGGGCGGTGGGATTCTCTACTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGAGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCATGTGGGACAGCTCAGCACACCAGCATGGTaGACCCTGAGAGGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: VSESLAKFTIGGLHVGQLSTPAW*TLRGRT Trigger: GGTTCTTCCTCTCAGGGTCCACCATGCTGGTGTGCT...GAGCTGTCCCACATGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCCGAGTGTATGTAATTaGGGATGGACGGGGCCATAT | + |
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Preference number: 2 (lower is better) Translates to: RKATKYAHWLPGQSSHYRPSVCN*GWTGPY Trigger: ATATGGCCCCGTCCATCCTCAATTACATACACTCGG...CCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTATACTTTTGTTAGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCTGTGGGACAGCTCGGTaGCACGTGACTGAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPILLLERPPNMHIGFLACGTAR*HVTEEH Trigger: GTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACA...GGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACTGCCTTGGCTGTAAGTaGGAGTCTAGCAAAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: KATKYAHWLPGQSSHYRHCLGCK*ESSKVH Trigger: GTGAACTTTGCTAGACTCTCACTTACAGCCAAGGCA...GTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGAGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCATGTGGGACAGCTCGATATGGTTTGGGTTTaGGCCTCTCCCCCTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VSESLAKFTIGGLHVGQLDMVWV*ASPPLP Trigger: AGGAAGAGGGGGAGAGGCCCAAACCCAAACCATATC...GAGCTGTCCCACATGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CAA 90 bp | AAGCATCAGCATATCAGCCAACAACTTTCTTCCAAGGATGGGTGCTaGGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTGGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KHQHISQQLSSKDGC*AVENPTAPDMVWVW Trigger: CCAAACCCAAACCATATCTGGGGCGGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGTTGTTGGCTGATATGCTGATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR TCA 90 bp | GGATGGACGGGGCCATATTTGGTGGCTAGAGGAGGACTCTCTGGTGACGTCAAGCATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GWTGPYLVARGGLSGDVKHGIWI*CLFLGH Trigger: GTGACCTAAAAACAAACATCAAATCCAGATCCCATG...CTTGACGTCACCAGAGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCATTTAATACCAGCACTTaGGAAGCTGAGGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KGHQICTLASWPKLPLQAFNTST*EAEAGR Trigger: TCTGCCTGCCTCAGCTTCCCAAGTGCTGGTATTAAA...TGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR CAA 90 bp | GGCTTCCTGGCCAAAGCTCCCACTACAGGCACATGGGATCTGGATTaGATGTTTGTTTTTAGGTCACAAGGACAAAGTGGCTTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: GFLAKAPTTGTWDLD*MFVFRSQGQSGFQT Trigger: AGTCTGGAAGCCACTTTGTCCTTGTGACCTAAAAACAAACATCAAATCCAGATCCCATGTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CAA 90 bp | CGCAGTTACCACCAGTGCAGTTCTTCCAAAGCCCTACAGATGCATTaGCGTAATCTGCAACCATCCAGACCTTTAATACCAGCACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RSYHQCSSSKALQMH*RNLQPSRPLIPALG Trigger: CCCAAGTGCTGGTATTAAAGGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATAGCACCTTTCTCACACCCTCAGGACTGGTTCTTTAGTTTAGGTTGGTGTCTACACAGTGACTCCTaGTTCCCTCCCAGGTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: QIAPFSHPQDWFFSLGWCLHSDS*FPPRLG Trigger: ACCTAACCTGGGAGGGAAGCAGGAGTCACTGTGTAG...ACACCAACCTAAACTAAAGAACCAGTCCTGAGGGTGTGAGAAAGGTGCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTGAGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCATGTGGGACAGCTCAAAGGCCACCAAATATaGACATTGGCTTCCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VSESLAKFTIGGLHVGQLKGHQI*TLASWP Trigger: TGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTT...GAGCTGTCCCACATGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RKATKYAHWLPGQSSHYRTFFQG*VLGSRE Trigger: TTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGT...CCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR GCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTACCTCCCAGGTTAGGTTaGTTCCTCCTACCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLPPRLG*FLLPSP Trigger: TGGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGG...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGAATACCCCTGCAGCCCCAACAATTTAGCTACCATCTGTCTGGATGCCACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: IQEYPCSPNNLATICLDATFFQG*VLGSRE Trigger: TTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGT...GGCATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAGCAATATCTGCTCTTGCTAAGACCTGAACCACCATCAGAACTTGATAATGAAGACCTCAGTGTGTaGCCCAGCAGCCACCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IEQYLLLLRPEPPSELDNEDLSV*PSSHPQ Trigger: TTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTC...ATTATCAAGTTCTGATGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KGHQICTLASWPKLPLQAHGIWI*CLFLGH Trigger: GTGACCTAAAAACAAACATCAAATCCAGATCCCATG...TGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACTCCAGCAGCTCGGTGACACGTaGCTGAGGAGCACTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: MFCEALSSLALENLEKLQQLGDT*LRSTAC Trigger: ACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTG...CTGGAGTTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACTCCAGTGTGGGACAGCTCGGTaGCACGTGACTGAGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: MFCEALSSLALENLEKLQCGTAR*HVTEEH Trigger: GTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACA...CTGGAGTTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAGCAATATCTGCTCTTGCTAAGACCTGAACCACCATCAGAACTTGATAATCCACCGCCCCAGATATaGTTTGGGTTTGGGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IEQYLLLLRPEPPSELDNPPPQI*FGFGPL Trigger: GAGAGGCCCAAACCCAAACCATATCTGGGGCGGTGG...ATTATCAAGTTCTGATGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGGACGGGGCCATATTTaGTGGCTAGAGGAGGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLGRGHI*WLEEDS Trigger: AGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCC...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGTTGATAATATGGATGTaGAAGACCTCAGTGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: RKATKYAHWLPGQSSHYRLIIWM*KTSVCD Trigger: GTCACACACTGAGGTCTTCCACATCCATATTATCAA...CCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCAGAACTTGATAATATaGATGTGGAAGACCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKATKYAHWLPGQSSHYRQNLII*MWKTSV Trigger: CACTGAGGTCTTCCACATCCATATTATCAAGTTCTG...CCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACTGTGGGACAGCTCGGTaGCACGTGACTGAGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYCGTAR*HVTEEH Trigger: GTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACA...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACTCCAGCCTCCCAGGTTAGGTTaGTTCCTCCTACCCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: MFCEALSSLALENLEKLQPPRLG*FLLPSP Trigger: TGGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGG...CTGGAGTTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTATACTTTTGTTAGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGGCCACCAAATATaGACATTGGCTTCCTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPILLLERPPNMHIGFLAKGHQI*TLASWP Trigger: TGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTT...GGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR GCA 90 bp | AGATCCTCTGGGGTAGAAACTTCCATTTCTTGGCTAAACCAATTCCATCAGCTTCGCAGTTACCACCAGTaGAGTTCTTCCAAAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: RSSGVETSISWLNQFHQLRSYHQ*SSSKAL Trigger: TAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCG...AAGCTGATGGAATTGGTTTAGCCAAGAAATGGAAGTTTCTACCCCAGAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAAGCCAGCACACCAGCATaGTGGACCCTGAGAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DPMFCEALSSLALENLEKASTPA*WTLRGR Trigger: TCTTCCTCTCAGGGTCCACCATGCTGGTGTGCTGGC...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACCCCTACAGATGCATTTaGGTAATCTGCAACCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDPYRCI*VICNHP Trigger: TGGATGGTTGCAGATTACGCAAATGCATCTGTAGGG...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCGGCAGTTCAGTAACCTACCTTGAACAGTCCCTTAAACATAATATGCTAGTCTCCAAGATCCTCTaGGGTAGAAACTTCCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QPGSSVTYLEQSLKHNMLVSKIL*GRNFHF Trigger: GAAATGGAAGTTTCTACCCCAGAGGATCTTGGAGAC...TAGCATATTATGTTTAAGGGACTGTTCAAGGTAGGTTACTGAACTGCCGGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR GCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAAAAGGCCACCAAATATaGACATTGGCTTCCTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLKGHQI*TLASWP Trigger: TGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTT...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACTTACAAACCATCTCTCTTCCTATACTTTTGTTAGAAAGGCCACCAAATGGACGGGGCCATATTTaGTGGCTAGAGGAGGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: LNLQTISLPILLLERPPNGRGHI*WLEEDS Trigger: AGAGTCCTCCTCTAGCCACCAAATATGGCCCCGTCC...ATTTGGTGGCCTTTCTAACAAAAGTATAGGAAGAGAGATGGTTTGTAAGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACCATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDHGIWI*CLFLGH Trigger: GTGACCTAAAAACAAACATCAAATCCAGATCCCATG...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTATACTTTTGTTAGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCTGTCAAAGGAACACATaGATTTCTCCCCTGTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: LPILLLERPPNMHIGFLACQRNT*ISPLLH Trigger: ATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACA...GGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACATGATATGGTTTGGGTTTaGGCCTCTCCCCCTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LYVKGTHAFLPCYIYKIHDMVWV*ASPPLP Trigger: AGGAAGAGGGGGAGAGGCCCAAACCCAAACCATATC...ATGTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACATCCGAGTGTATGTAATTaGGGATGGACGGGGCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: LYVKGTHAFLPCYIYKIHPSVCN*GWTGPY Trigger: ATATGGCCCCGTCCATCCTCAATTACATACACTCGG...ATGTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAATGCCTTGGCTGTAAGTaGGAGTCTAGCAAAGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: DPMFCEALSSLALENLEKCLGCK*ESSKVH Trigger: GTGAACTTTGCTAGACTCTCACTTACAGCCAAGGCA...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGCAATATCTGCTCTTGCTAAGACCTGAACCACCATCAGAACTTGATAATACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: IEQYLLLLRPEPPSELDNTFFQG*VLGSRE Trigger: TTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGT...ATTATCAAGTTCTGATGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTATACTTTTGTTAGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCGTTGTTGGTCATCATTaGACTTCCTCAAATATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LPILLLERPPNMHIGFLAVVGHH*TSSNIP Trigger: AGGAATATTTGAGGAAGTCCAATGATGACCAACAAC...GGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTACAGAACTTGATAATATaGATGTGGAAGACCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLQNLII*MWKTSV Trigger: CACTGAGGTCTTCCACATCCATATTATCAAGTTCTG...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACATGTCACAAGGACAAAGTaGCTTCCAGACTTAGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LYVKGTHAFLPCYIYKIHVTRTK*LPDLAS Trigger: TGAGGCTAAGTCTGGAAGCCACTTTGTCCTTGTGAC...ATGTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CAA 90 bp | GTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTTCAGAATaGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATAC | + |
|
Preference number: 2 (lower is better) Translates to: VVGHHWTSSNIPSSE*YVKGTHAFLPCYIY Trigger: GTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCTGAACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACCATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYHGIWI*CLFLGH Trigger: GTGACCTAAAAACAAACATCAAATCCAGATCCCATG...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATATATACAAGATACATTaGGTGCTTTGGGGGAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RIVCQRNTCISPLLHIQDIYKIH*VLWGNP Trigger: AGGATTCCCCCAAAGCACTCAATGTATCTTGTATAT...ATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACTTGATAATATGGATGTaGAAGACCTCAGTGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYLIIWM*KTSVCD Trigger: GTCACACACTGAGGTCTTCCACATCCATATTATCAA...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACCAGAACTTGATAATATaGATGTGGAAGACCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYQNLII*MWKTSV Trigger: CACTGAGGTCTTCCACATCCATATTATCAAGTTCTG...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR GCA 72 bp | CTACACAGTGACTCCTGCTTCCCTCCCAGGTTAGGTTaGTTCCTCCTACCCAGCCCACCCCGCCCCCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: LHSDSCFPPRLG*FLLPSPPRPQT Trigger: CGTCTGGGGGCGGGGTGGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGGGAAGCAGGAGTCACTGTGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTACCCTCCCAGGTTAGGTaGCTTCCTCCTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRPQCVTQQPPSRVAPVVPSQVR*LPPTQP Trigger: GGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGGG...TACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | GAGGCCTCCATGTGGGACAGCTCGGTGACACGTGACTaGGGAGCACTGCCTGTCCCCACCTGTCTCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EASMWDSSVTRD*GALPVPTCLQD Trigger: ATCTTGGAGACAGGTGGGGACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACATGGAGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | ATAGGAGGCCTCCATGTGGGACAGCTCGGTGACACGTaGCTGAGGAGCACTGCCTGTCCCCACCTGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IGGLHVGQLGDT*LRSTACPHLSP Trigger: TGGAGACAGGTGGGGACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACATGGAGGCCTCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR CCA 72 bp | ACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATaGCAGCTGGGGAGGCCCCGAGTGTATGTAATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TQQPPSRVAPVV*QLGRPRVYVIE Trigger: CTCAATTACATACACTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | GTTCACAATAGGAGGCCTCCATGTGGGACAGCTCGGTaGCACGTGACTGAGGAGCACTGCCTGTCCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VHNRRPPCGTAR*HVTEEHCLSPP Trigger: AGGTGGGGACAGGCAGTGCTCCTCAGTCACGTGTCACCGAGCTGTCCCACATGGAGGCCTCCTATTGTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACCCCTCCCAGGTTAGGTaGCTTCCTCCTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KATKYAHWLPGQSSHYRHPSQVR*LPPTQP Trigger: GGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGGG...GTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGGAGCAATATCTGCTCTaGCTAAGACCTGAACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: CVTQQPPSRVAPVVWQLGEQYLL*LRPEPP Trigger: TGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTC...CCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTACACCAAATATGCACATaGGCTTCCTGGCCAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRPQCVTQQPPSRVAPVVHQICT*ASWPKL Trigger: GAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTG...TACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAGGCCCCGAGACCAATTCCATCAGCTaGAACTTACAAACCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSHPQEWRQWYGSWGGPETNSIS*NLQTIS Trigger: AGAGATGGTTTGTAAGTTCAAGCTGATGGAATTGGT...CTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCAGCCCACCCCGCCCCCAGACGCCCATGAGCGTATTCGGCTTATTTCTTGCCCTACAGATGCATTaGCGTAATCTGCAACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: LPSPPRPQTPMSVFGLFLALQMH*RNLQPS Trigger: GGATGGTTGCAGATTACGCAAATGCATCTGTAGGGC...AAGAAATAAGCCGAATACGCTCATGGGCGTCTGGGGGCGGGGTGGGCTGGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR GCA 72 bp | TGCCGTAGGACAGGGAGCCGTCGCAGTTACCACCAGTaGAGTTCTTCCAAAGCCCTACAGATGCATTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CRRTGSRRSYHQ*SSSKALQMHLR Trigger: ACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCGACGGCTCCCTGTCCTACGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR CCA 72 bp | ACACTCCAACCAGGATACACAGCCAGCACACCAGCATaGTGGACCCTGAGAGGAAGAACCGGTTTCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLQPGYTASTPA*WTLRGRTGFPS Trigger: AGAAGGGAAACCGGTTCTTCCTCTCAGGGTCCACCATGCTGGTGTGCTGGCTGTGTATCCTGGTTGGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR TCA 72 bp | GAACTTGATAATATGGATGTGGAAGACCTCAGTGTGTaGCCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ELDNMDVEDLSV*PSSHPQEWRQW Trigger: CCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCCACATCCATATTATCAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR CCA 72 bp | GCATCAGCATATCAGCCAACAACTTTCTTCCAAGGATaGGTGCTTGGCAGTAGAGAATCCCACCGCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASAYQPTTFFQG*VLGSRESHRPR Trigger: TCTGGGGCGGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGTTGTTGGCTGATATGCTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCCACCAAATATGCACATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACAAGGCTTGCACTGCCTaGATAGCATCTTCATTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KATKYAHWLPGQSSHYRHKACTA*IASSLP Trigger: CGGCAATGAAGATGCTATCAAGGCAGTGCAAGCCTT...GTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR CCA 72 bp | GACCTGAACCACCATCAGAACTTGATAATATGGATGTaGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLNHHQNLIIWM*KTSVCDPAATL Trigger: GAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCCACATCCATATTATCAAGTTCTGATGGTGGTTCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCGGCAGTTCAGTAACCTACCTTGAACAGTCCCTTAAACATAATATGCTATCCAAGGATGGGTGCTaGGCAGTAGAGAATCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QPGSSVTYLEQSLKHNMLSKDGC*AVENPT Trigger: GGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGA...TAGCATATTATGTTTAAGGGACTGTTCAAGGTAGGTTACTGAACTGCCGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGAATACCCCTGCAGCCCCAACAATTTAGCTACCATCTGTCTGGATGCCGAGCAATATCTGCTCTaGCTAAGACCTGAACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: IQEYPCSPNNLATICLDAEQYLL*LRPEPP Trigger: TGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTC...GGCATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACCCTCCCAGGTTAGGTaGCTTCCTCCTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DPMFCEALSSLALENLEKPSQVR*LPPTQP Trigger: GGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGGG...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATCCCTCCCAGGTTAGGTaGCTTCCTCCTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RIVCQRNTCISPLLHIQDPSQVR*LPPTQP Trigger: GGGCTGGGTAGGAGGAAGCAACCTAACCTGGGAGGG...ATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGAATACCCCTGCAGCCCCAACAATTTAGCTACCATCTGTCTGGATGCCCATATACAAGATACATaGAGTGCTTTGGGGGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: IQEYPCSPNNLATICLDAHIQDT*SALGES Trigger: GGATTCCCCCAAAGCACTCAATGTATCTTGTATATG...GGCATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | CCAAAGCTCCCACTACAGGCACATGGGATCTGGATTTaGTGTTTGTTTTTAGGTCACAAGGACAAAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKLPLQAHGIWI*CLFLGHKDKVA Trigger: AGCCACTTTGTCCTTGTGACCTAAAAACAAACATCAAATCCAGATCCCATGTGCCTGTAGTGGGAGCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | CTAGAAAAACTCCAGAAAAGCTGCCTTGGCTGTAAGTaGGAGTCTAGCAAAGTTCACAATAGGAGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEKLQKSCLGCK*ESSKVHNRRPP Trigger: TGGAGGCCTCCTATTGTGAACTTTGCTAGACTCTCACTTACAGCCAAGGCAGCTTTTCTGGAGTTTTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR CCA 72 bp | ATTGGCTTCCTGGCCAAAGCTCCCACTACAGGCACATaGGATCTGGATTTGATGTTTGTTTTTAGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: IGFLAKAPTTGT*DLDLMFVFRSQ Trigger: TTGTGACCTAAAAACAAACATCAAATCCAGATCCCATGTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR CCA 72 bp | TATACTTTTGTTAGAAAGGCCACCAAATATGCACATTaGCTTCCTGGCCAAAGCTCCCACTACAGGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: YTFVRKATKYAH*LPGQSSHYRHM Trigger: CATGTGCCTGTAGTGGGAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGAGCAATATCTGCTCTaGCTAAGACCTGAACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLEQYLL*LRPEPP Trigger: TGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTC...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR GCA 72 bp | ATCATACTACCTCTAAGTCTTATACAGGAATACCCCTaGAGCCCCAACAATTTAGCTACCATCTGTCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IILPLSLIQEYP*SPNNLATICLD Trigger: ATCCAGACAGATGGTAGCTAAATTGTTGGGGCTGCAGGGGTATTCCTGTATAAGACTTAGAGGTAGTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACAACCACCATCAGAACTaGATAATATGGATGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDNHHQN*IIWMWK Trigger: CTTCCACATCCATATTATCAAGTTCTGATGGTGGTT...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCGGCAGTTCAGTAACCTACCTTGAACAGTCCCTTAAACATAATATGCTAACCAATTCCATCAGCTaGAACTTACAAACCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QPGSSVTYLEQSLKHNMLTNSIS*NLQTIS Trigger: AGAGATGGTTTGTAAGTTCAAGCTGATGGAATTGGT...TAGCATATTATGTTTAAGGGACTGTTCAAGGTAGGTTACTGAACTGCCGGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTATACTTTTGTTAGAAAGGCCACCAAATATGCACATTGGCTTCCTGGCCGAGGCATTATCATCTTaGGCTCTAGAGAATCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPILLLERPPNMHIGFLAEALSS*ALENLE Trigger: TTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTC...GGCCAGGAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACTGTTGTTGGTCATCATaGGACTTCCTCAAATATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDCCWSS*DFLKYS Trigger: GGAATATTTGAGGAAGTCCAATGATGACCAACAACA...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR CCA 72 bp | TCTCCAAGATCCTCTGGGGTAGAAACTTCCATTTCTTaGCTAAACCAATTCCATCAGCTTGAACTTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPRSSGVETSIS*LNQFHQLELTN Trigger: GTTTGTAAGTTCAAGCTGATGGAATTGGTTTAGCCAAGAAATGGAAGTTTCTACCCCAGAGGATCTTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCTCTGGGGTAGAAACTTCCATTTCTTGGCTAAACCAATTCCATCAGCTTAACCACCATCAGAACTaGATAATATGGATGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSGVETSISWLNQFHQLNHHQN*IIWMWK Trigger: CTTCCACATCCATATTATCAAGTTCTGATGGTGGTT...AAGCTGATGGAATTGGTTTAGCCAAGAAATGGAAGTTTCTACCCCAGAGGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACCACCAAATATGCACATaGGCTTCCTGGCCAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYHQICT*ASWPKL Trigger: GAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTG...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACTTACAAACCATCTCTCTTCCTATACTTTTGTTAGAAAGGCCACCAAATCACCAAATATGCACATaGGCTTCCTGGCCAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNLQTISLPILLLERPPNHQICT*ASWPKL Trigger: GAGCTTTGGCCAGGAAGCCAATGTGCATATTTGGTG...ATTTGGTGGCCTTTCTAACAAAAGTATAGGAAGAGAGATGGTTTGTAAGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTACCAATTCCATCAGCTaGAACTTACAAACCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILVPSVVGHHWTSSNIPSTNSIS*NLQTIS Trigger: AGAGATGGTTTGTAAGTTCAAGCTGATGGAATTGGT...ACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTGAGGCATTATCATCTTaGGCTCTAGAGAATCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ILVPSVVGHHWTSSNIPSEALSS*ALENLE Trigger: TTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTC...ACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATGAGCAATATCTGCTCTaGCTAAGACCTGAACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: RIVCQRNTCISPLLHIQDEQYLL*LRPEPP Trigger: TGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTC...ATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR GCA 72 bp | CCTAAGAGTTTCTCCTGTTTTAAAAGAGAAACTGTCTaGCCATCACCAGGACTTTATTCATCTCACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: PKSFSCFKRETV*PSPGLYSSHTM Trigger: CATTGTGTGAGATGAATAAAGTCCTGGTGATGGGCAGACAGTTTCTCTTTTAAAACAGGAGAAACTCTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACTCCAGAATGATGAGTGTAGATaGACACTCCAACCAGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: MFCEALSSLALENLEKLQNDECR*TLQPGY Trigger: GTATCCTGGTTGGAGTGTCAATCTACACTCATCATT...CTGGAGTTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATAATTGGCTTACAGCTTaGCCATCTTTAGCTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RIVCQRNTCISPLLHIQDNWLTA*PSLAGK Trigger: TTTTCCAGCTAAAGATGGCAAAGCTGTAAGCCAATT...ATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| 3UTR TCA 72 bp | AACTTCCATTTCTTGGCTAAACCAATTCCATCAGCTTaGACTTACAAACCATCTCTCTTCCTATACTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NFHFLAKPIPSA*TYKPSLFLYFC Trigger: ACAAAAGTATAGGAAGAGAGATGGTTTGTAAGTTCAAGCTGATGGAATTGGTTTAGCCAAGAAATGGAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| CDS-3UTR CCA 90 bp | TGGATGTGGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCGCCAGCACACCAGCATaGTGGACCCTGAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WMWKTSVCDPAATLKSGAASTPA*WTLRGR Trigger: TCTTCCTCTCAGGGTCCACCATGCTGGTGTGCTGGC...GGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCCACATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGTAGAGAATCCCACCGCCCCAGATATGGTTTGGGTTTGGGCCTCTCCCCCAGCACACCAGCATGGTaGACCCTGAGAGGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GSRESHRPRYGLGLGLSPSTPAW*TLRGRT Trigger: GGTTCTTCCTCTCAGGGTCCACCATGCTGGTGTGCT...GGGGGAGAGGCCCAAACCCAAACCATATCTGGGGCGGTGGGATTCTCTACTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| CDS-3UTR GCA 90 bp | TGGATGTGGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCCGCAGTTACCACCAGTaGAGTTCTTCCAAAGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: WMWKTSVCDPAATLKSGARSYHQ*SSSKAL Trigger: TAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCG...GGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCCACATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| 3UTR CAA 72 bp | ACAGAAGCAGATCCAGGTCAGGATGAAACAATAGCCTaGGTGGCTGCTGGAGTTGAAGTTCCCTTCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEADPGQDETIA*VAAGVEVPFAV Trigger: CACAGCGAAGGGAACTTCAACTCCAGCAGCCACCAAGGCTATTGTTTCATCCTGACCTGGATCTGCTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
||
| CDS-3UTR CCA 90 bp | CAGATAGCACCTTTCTCACACCCTCAGGACTGGTTCTTTAGTTTAGGTTGGTGTAGCACACCAGCATGGTaGACCCTGAGAGGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QIAPFSHPQDWFFSLGWCSTPAW*TLRGRT Trigger: GGTTCTTCCTCTCAGGGTCCACCATGCTGGTGTGCT...ACACCAACCTAAACTAAAGAACCAGTCCTGAGGGTGTGAGAAAGGTGCTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| 3UTR CAA 72 bp | CATATCAGCCAACAACTTTCTTCCAAGGATGGGTGCTaGGCAGTAGAGAATCCCACCGCCCCAGATATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HISQQLSSKDGC*AVENPTAPDMV Trigger: AACCATATCTGGGGCGGTGGGATTCTCTACTGCCAAGCACCCATCCTTGGAAGAAAGTTGTTGGCTGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTGCCAGCACACCAGCATaGTGGACCCTGAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILVPSVVGHHWTSSNIPSASTPA*WTLRGR Trigger: TCTTCCTCTCAGGGTCCACCATGCTGGTGTGCTGGC...ACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| CDS-3UTR TCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTACAGCATGGTGGACCCTaGGAGGAAGAACCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLQHGGP*EEEPVS Trigger: GGAAACCGGTTCTTCCTCTCAGGGTCCACCATGCTG...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTAGCACACCAGCATGGTaGACCCTGAGAGGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: ILVPSVVGHHWTSSNIPSSTPAW*TLRGRT Trigger: GGTTCTTCCTCTCAGGGTCCACCATGCTGGTGTGCT...ACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| 3UTR CAA 72 bp | GCCAAAGCTCCCACTACAGGCACATGGGATCTGGATTaGATGTTTGTTTTTAGGTCACAAGGACAAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AKAPTTGTWDLD*MFVFRSQGQSG Trigger: GCCACTTTGTCCTTGTGACCTAAAAACAAACATCAAATCCAGATCCCATGTGCCTGTAGTGGGAGCTTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| CDS-3UTR TCA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACAGCATGGTGGACCCTaGGAGGAAGAACCGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: DPMFCEALSSLALENLEKQHGGP*EEEPVS Trigger: GGAAACCGGTTCTTCCTCTCAGGGTCCACCATGCTG...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| 3UTR CAA 72 bp | CACCAGTGCAGTTCTTCCAAAGCCCTACAGATGCATTaGCGTAATCTGCAACCATCCAGACCTTTAATACCA | + |
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Preference number: 4 (lower is better) Translates to: HQCSSSKALQMH*RNLQPSRPLIP Trigger: TGGTATTAAAGGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCGGCAGTTCAGTAACCTACCTTGAACAGTCCCTTAAACATAATATGCTACCCTACAGATGCATTTaGGTAATCTGCAACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QPGSSVTYLEQSLKHNMLPYRCI*VICNHP Trigger: TGGATGGTTGCAGATTACGCAAATGCATCTGTAGGG...TAGCATATTATGTTTAAGGGACTGTTCAAGGTAGGTTACTGAACTGCCGGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR GCA 90 bp | ATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTAGTCCCTACAGATGCATTTaGGTAATCTGCAACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: ILVPSVVGHHWTSSNIPSPYRCI*VICNHP Trigger: TGGATGGTTGCAGATTACGCAAATGCATCTGTAGGG...ACTAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| 3UTR CAA 72 bp | TCCAGACTTAGCCTCAGCATAGAGCAATATCTGCTCTaGCTAAGACCTGAACCACCATCAGAACTTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: SRLSLSIEQYLL*LRPEPPSELDN Trigger: ATTATCAAGTTCTGATGGTGGTTCAGGTCTTAGCAAGAGCAGATATTGCTCTATGCTGAGGCTAAGTCTGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTGGTCCCCAGTGTTGTTGGTCATCATTGGACTTCCTCAAATATTCCTACCCTACAGATGCATTTaGGTAATCTGCAACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: IFWSPVLLVIIGLPQIFLPYRCI*VICNHP Trigger: TGGATGGTTGCAGATTACGCAAATGCATCTGTAGGG...TAGGAATATTTGAGGAAGTCCAATGATGACCAACAACACTGGGGACCAGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR GCA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAACGCAGTTACCACCAGTaGAGTTCTTCCAAAGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: DPMFCEALSSLALENLEKRSYHQ*SSSKAL Trigger: TAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCG...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR TCA 90 bp | TTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACATCCAGGGCTACACAAATaGACTCTATGTTGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: LYVKGTHAFLPCYIYKIHPGLHK*TLCWQW Trigger: CCATTGCCAACATAGAGTTCATTTGTGTAGCCCTGG...ATGTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| 3UTR CAA 72 bp | AGCTTGAACTTACAAACCATCTCTCTTCCTATACTTTaGTTAGAAAGGCCACCAAATATGCACATTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLNLQTISLPIL*LERPPNMHIGF Trigger: GAAGCCAATGTGCATATTTGGTGGCCTTTCTAACAAAAGTATAGGAAGAGAGATGGTTTGTAAGTTCAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| 3UTR CAA 72 bp | CATCATTGGACTTCCTCAAATATTCCTAGTTCAGAATaGTATGTCAAAGGAACACATGCATTTCTCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HHWTSSNIPSSE*YVKGTHAFLPC Trigger: ACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATTCTGAACTAGGAATATTTGAGGAAGTCCAATGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000154270.8 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | TGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAAGGCTTGCACTGCCTaGATAGCATCTTCATTGCCG | + |
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Preference number: 5 (lower is better) Translates to: CVTQQPPSRVAPVVWQLGKACTA*IASSLP Trigger: CGGCAATGAAGATGCTATCAAGGCAGTGCAAGCCTT...CCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | AGCAGCCACCCTCAAGAGTGGCGCCAGTGGTATGGCAGCTGGGGAGGCCCCGAGAATGATGAGTGTAGATaGACACTCCAACCAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: SSHPQEWRQWYGSWGGPENDECR*TLQPGY Trigger: GTATCCTGGTTGGAGTGTCAATCTACACTCATCATT...CTCGGGGCCTCCCCAGCTGCCATACCACTGGCGCCACTCTTGAGGGTGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | GGAAGACCTCAGTGTGTGACCCAGCAGCCACCCTCAAGAGTGGCGCCAGTGGTAAATGATGAGTGTAGATaGACACTCCAACCAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: GRPQCVTQQPPSRVAPVVNDECR*TLQPGY Trigger: GTATCCTGGTTGGAGTGTCAATCTACACTCATCATT...TACCACTGGCGCCACTCTTGAGGGTGGCTGCTGGGTCACACACTGAGGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS GCA 90 bp | GCCGTCGCAGTTACCACCAGTGCAGTTCTTCCAAAGCCCTACAGATaGATTTGCGTAATCTGCAACCATCCAGACGTTGGCAATGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: AVAVTTSAVLPKPYR*ICVICNHPDVGNGG Trigger: TCCACCATTGCCAACGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCGACGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS GCA 90 bp | ACCAGTGCAGTTCTTCCAAAGCCCTACAGATGCATTTGCGTAATCTaGAACCATCCAGACGTTGGCAATGGTGGAGACAAACAGCATAAT | + |
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Preference number: 5 (lower is better) Translates to: TSAVLPKPYRCICVI*NHPDVGNGGDKQHN Trigger: ATTATGCTGTTTGTCTCCACCATTGCCAACGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | CTCCATAGTGAAGAGCTGGAACACGAAGACCACAAGGGAGATGATGGAGAAGATCAAATGAACTCTATGTaGGCAATGGTGGAGACAAAC | + |
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Preference number: 5 (lower is better) Translates to: LHSEELEHEDHKGDDGEDQMNSM*AMVETN Trigger: GTTTGTCTCCACCATTGCCAACATAGAGTTCATTTG...ATCTTCTCCATCATCTCCCTTGTGGTCTTCGTGTTCCAGCTCTTCACTATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154270.8 |
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| CDS-3UTR CAA 90 bp | ACGGTTTGCTTAATAATCCATAACCAGATAGCACCTTTCTCACACCCTCAGGACAATGATGAGTGTAGATaGACACTCCAACCAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: TVCLIIHNQIAPFSHPQDNDECR*TLQPGY Trigger: GTATCCTGGTTGGAGTGTCAATCTACACTCATCATT...GTCCTGAGGGTGTGAGAAAGGTGCTATCTGGTTATGGATTATTAAGCAAACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | GACCCTATGTTTTGTGAGGCATTATCATCTTTGGCTCTAGAGAATCTAGAAAAAGCCCTACAGATGCATTaGCGTAATCTGCAACCATCC | + |
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Preference number: 5 (lower is better) Translates to: DPMFCEALSSLALENLEKALQMH*RNLQPS Trigger: GGATGGTTGCAGATTACGCAAATGCATCTGTAGGGC...TTTTTCTAGATTCTCTAGAGCCAAAGATGATAATGCCTCACAAAACATAGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACGCCCTACAGATGCATTaGCGTAATCTGCAACCATCC | + |
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Preference number: 5 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYALQMH*RNLQPS Trigger: GGATGGTTGCAGATTACGCAAATGCATCTGTAGGGC...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | TTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACATGCCCTACAGATGCATTaGCGTAATCTGCAACCATCC | + |
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Preference number: 5 (lower is better) Translates to: LYVKGTHAFLPCYIYKIHALQMH*RNLQPS Trigger: GGATGGTTGCAGATTACGCAAATGCATCTGTAGGGC...ATGTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS-3UTR CAA 90 bp | AATTGTATGTCAAAGGAACACATGCATTTCTCCCCTGTTACATATACAAGATACAAGGCTTGCACTGCCTaGATAGCATCTTCATTGCCG | + |
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Preference number: 5 (lower is better) Translates to: NCMSKEHMHFSPVTYTRYKACTA*IASSLP Trigger: CGGCAATGAAGATGCTATCAAGGCAGTGCAAGCCTT...GTATCTTGTATATGTAACAGGGGAGAAATGCATGTGTTCCTTTGACATACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS CAA 90 bp | CGCAGTTACCACCAGTGCAGTTCTTCCAAAGCCCTACAGATGCATTaGCGTAATCTGCAACCATCCAGACGTTGGCAATGGTGGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: RSYHQCSSSKALQMH*RNLQPSRRWQWWRQ Trigger: TTGTCTCCACCATTGCCAACGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTGGTAACTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS CAA 72 bp | CACCAGTGCAGTTCTTCCAAAGCCCTACAGATGCATTaGCGTAATCTGCAACCATCCAGACGTTGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: HQCSSSKALQMH*RNLQPSRRWQW Trigger: CCATTGCCAACGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAACTGCACTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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| CDS GCA 72 bp | GTTCTTCCAAAGCCCTACAGATGCATTTGCGTAATCTaGAACCATCCAGACGTTGGCAATGGTGGAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: VLPKPYRCICVI*NHPDVGNGGDK Trigger: TTTGTCTCCACCATTGCCAACGTCTGGATGGTTGCAGATTACGCAAATGCATCTGTAGGGCTTTGGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032330.16 ENSMUST00000111907.2 ENSMUST00000205156.3 |
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