Pregenerated sensors for EMC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022337Ensembl transcript IDs: ENSMUST00000022962.8
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTATTCAACTGTGTAGTTTaGAATCTAACGTCAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLFNCVV*NLTSNG Trigger: CCCATTTGACGTTAGATTTCAAACTACACAGTTGAA...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| 3UTR GCA 72 bp | CTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTaGTTCCTAGCAGTACAAGGCAAGCTGAGGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: LKSLSHGLPPSP*FLAVQGKLRFS Trigger: ACTAAACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTCATGCCAGGCTTCTTaGTCTCCAACAAACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVSCQAS*SPTNCS Trigger: GGAGCAGTTTGTTGGAGACCAAGAAGCCTGGCATGA...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR TCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTAACCGCTTAACTCTGTaGCTACCAGGGAATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVNRLTL*LPGNCL Trigger: AAGACAATTCCCTGGTAGTCACAGAGTTAAGCGGTT...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR TCA 90 bp | AAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCCACCTTGGGTGTATTTaGCTTCTGCATACTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KSLSHGLPPSPCFLAVQGHLGCI*LLHTAD Trigger: GTCAGCAGTATGCAGAAGTCAAATACACCCAAGGTG...GCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CCA 90 bp | AAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCCCTGGGCTTTTCGAATaGCAATCTTACGCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KSLSHGLPPSPCFLAVQGPGLFE*QSYAFW Trigger: CCAGAAAGCGTAAGATTGCCATTCGAAAAGCCCAGG...GCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTCTGAAGACAAAACAATaGCAAGTCATCCCGACCATA | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVLKTKQ*QVIPTI Trigger: TATGGTCGGGATGACTTGGCATTGTTTTGTCTTCAG...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | GGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTAGTTGGTCTCCAACAAACTaGTCCAGATACTCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLPPSPCFLAVQGKLRFSWSPTN*SRYSFS Trigger: GCTGAATGAGTATCTGGAGCAGTTTGTTGGAGACCA...ACTAAACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CCA 90 bp | AAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCGGCAGCAGTGTTAGTTaGATCTTCTTGCAAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: KSLSHGLPPSPCFLAVQGGSSVS*IFLQNP Trigger: CGGATTTTGCAAGAAGATCCAACTAACACTGCTGCC...GCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR TCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTACTTCTGCATACTGCTaGCAGTATAAGTGGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVTSAYC*QYKWLC Trigger: ACATAACCACTTATACTGTCAGCAGTATGCAGAAGT...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTTTTCAAGTCCACCTTaGGTGTATTTGACTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVFSSPP*VYLTSA Trigger: TGCAGAAGTCAAATACACCCAAGGTGGACTTGAAAA...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAAGTTCTGCAAGTTCATaGCAGGCTTCTTGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLSSASS*QASWSP Trigger: TGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACT...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTATTGATATAAAGTTCTaGAAGTTCATGCCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PWITSISLLPSSTRQAEVIDIKF*KFMPGF Trigger: GAAGCCTGGCATGAACTTGCAGAACTTTATATCAAT...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | GGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTAGTAGAAGCAATATGACTTaGAGACATGTAGAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GLPPSPCFLAVQGKLRFSRSNMT*RHVEPK Trigger: TTTGGGCTCTACATGTCTGCAAGTCATATTGCTTCT...ACTAAACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | GGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTAGTTTAGTTGGATCTTCTTaGAAAATCCGATCATACAGT | + |
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Preference number: 4 (lower is better) Translates to: GLPPSPCFLAVQGKLRFSLVGSS*KIRSYS Trigger: ACTGTATGATCGGATTTTGCAAGAAGATCCAACTAA...ACTAAACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCTGCAATCATGACCTaGTCATATATGATCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLAAIMT*SYMIQM Trigger: CATTTGGATCATATATGAGCAGGTCATGATTGCAGC...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR TCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTATGTCTTCTTAATTCCTaGAGACAAAACAATGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLCLLNS*RQNNAK Trigger: CTTGGCATTGTTTTGTCTTCAGGAATTAAGAAGACA...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGTTGTTGAGTTTCAGTaGCTGTGCAAAATACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLVVEFQ*LCKILS Trigger: AGAAAGTATTTTGCACAGGCACTGAAACTCAACAAC...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR GCA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTACAACATGTCTTCAACTaGCTTAAGAGAGTATTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLQHVFN*LKRVFG Trigger: ACCAAATACTCTCTTAAGGCAGTTGAAGACATGTTG...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | AAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCTTCATGCCAGGCTTCTaGGTCTCCAACAAACTGCTC | + |
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Preference number: 5 (lower is better) Translates to: KSLSHGLPPSPCFLAVQGFMPGF*VSNKLL Trigger: GAGCAGTTTGTTGGAGACCAAGAAGCCTGGCATGAA...GCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTGTTTTCAAGTCCACCTaGGGTGTATTTGACTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PWITSISLLPSSTRQAEVVFKST*GVFDFC Trigger: GCAGAAGTCAAATACACCCAAGGTGGACTTGAAAAC...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTATAAGCCCTGTTTATTaGATTAGCGGCCCAACTAGC | + |
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Preference number: 5 (lower is better) Translates to: PWITSISLLPSSTRQAEVISPVY*ISGPTS Trigger: GCTAGTTGGGCCGCTAATCAAATAAACAGGGCTTAT...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTAGTGGTTATGTGGATTaGTCATCATCAGCTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: PWITSISLLPSSTRQAEVSGYVD*SSSAPL Trigger: TAGAGGAGCTGATGATGACAAATCCACATAACCACT...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTGTTAGTTGGATCTTCTaGCAAAATCCGATCATACAG | + |
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Preference number: 5 (lower is better) Translates to: PWITSISLLPSSTRQAEVVSWIF*QNPIIQ Trigger: CTGTATGATCGGATTTTGCAAGAAGATCCAACTAAC...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | CCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTGCCTTAAGAGAGTATTaGGTTTCCTTCTTACTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PWITSISLLPSSTRQAEVALREY*VSFLLR Trigger: TCGAAGTAAGAAGGAAACCAAATACTCTCTTAAGGC...AACCTCAGCTTGCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTACTCATGTTCCTGTTGTaGAGTTTCAGTGCCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLLMFLL*SFSACA Trigger: TGCACAGGCACTGAAACTCAACAACAGGAACATGAG...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCTCTCATGTTCCTGTaGTTGAGTTTCAGTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLALMFL*LSFSAC Trigger: ACAGGCACTGAAACTCAACAACAGGAACATGAGAGC...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS TCA 90 bp | TTGCAGACATGTAGAGCCCAAACAGAGCTCTCATGTTCCTGTTGTTaGGTTTCAGTGCCTGTGCAAAATACTTTCTTGAAAGCTCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LQTCRAQTELSCSCC*VSVPVQNTFLKARG Trigger: ACCTCGAGCTTTCAAGAAAGTATTTTGCACAGGCACTGAAACTCAACAACAGGAACATGAGAGCTCTGTTTGGGCTCTACATGTCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS GCA 90 bp | GCAAAAAGCTGCTTTGGCATAGTCGTGTTCATTGATATAAAGTTCTaGAAGTTCATGCCAGGCTTCTTGGTCTCCAACAAACTGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AKSCFGIVVFIDIKF*KFMPGFLVSNKLLQ Trigger: CTGGAGCAGTTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTATATCAATGAACACGACTATGCCAAAGCAGCTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS TCA 90 bp | TCAGCTCCTCTAAGCAAAAAGCTGCTTTGGCATAGTCGTGTTCATTaGTATAAAGTTCTGCAAGTTCATGCCAGGCTTCTTGGTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SAPLSKKLLWHSRVH*YKVLQVHARLLGLQ Trigger: TTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTATATCAATGAACACGACTATGCCAAAGCAGCTTTTTGCTTAGAGGAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS TCA 90 bp | CATGTTCCTGTTGTTGAGTTTCAGTGCCTGTGCAAAATACTTTCTTaGAAGCTCGAGGTTTTCAAGTCCACCTTGGGTGTATTTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: HVPVVEFQCLCKILS*KLEVFKSTLGVFDF Trigger: GAAGTCAAATACACCCAAGGTGGACTTGAAAACCTCGAGCTTTCAAGAAAGTATTTTGCACAGGCACTGAAACTCAACAACAGGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS-3UTR CAA 90 bp | TCAATAGGTCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGTGCAAAATACTTTCTaGAAAGCTCGAGGTTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SIGLKSLSHGLPPSPCFLVQNTF*KARGFQ Trigger: TTGAAAACCTCGAGCTTTCAAGAAAGTATTTTGCAC...TAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAGATTTAAGACCTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 72 bp | CTTACGCTTTCTGGCAGCAGTGTTAGTTGGATCTTCTaGCAAAATCCGATCATACAGTTGTATAGCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: LTLSGSSVSWIF*QNPIIQLYSIV Trigger: GACGATGCTATACAACTGTATGATCGGATTTTGCAAGAAGATCCAACTAACACTGCTGCCAGAAAGCGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 90 bp | GGCAGCAGTGTTAGTTGGATCTTCTTGCAAAATCCGATCATACAGTaGTATAGCATCGTCATATCTTTCCATAGCTTCAAATCGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GSSVSWIFLQNPIIQ*YSIVISFHSFKSHA Trigger: GGCATGCGATTTGAAGCTATGGAAAGATATGACGATGCTATACAACTGTATGATCGGATTTTGCAAGAAGATCCAACTAACACTGCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS TCA 72 bp | AGTCCACCTTGGGTGTATTTGACTTCTGCATACTGCTaGCAGTATAAGTGGTTATGTGGATTTGTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: SPPWVYLTSAYC*QYKWLCGFVII Trigger: GATGATGACAAATCCACATAACCACTTATACTGTCAGCAGTATGCAGAAGTCAAATACACCCAAGGTGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS GCA 72 bp | TTACGCTTTCTGGCAGCAGTGTTAGTTGGATCTTCTTaGAAAATCCGATCATACAGTTGTATAGCATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRFLAAVLVGSS*KIRSYSCIASS Trigger: TGACGATGCTATACAACTGTATGATCGGATTTTGCAAGAAGATCCAACTAACACTGCTGCCAGAAAGCGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS GCA 72 bp | TGCTTTGGCATAGTCGTGTTCATTGATATAAAGTTCTaGAAGTTCATGCCAGGCTTCTTGGTCTCCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: CFGIVVFIDIKF*KFMPGFLVSNK Trigger: TTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTATATCAATGAACACGACTATGCCAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 72 bp | ATTGATATAAAGTTCTGCAAGTTCATGCCAGGCTTCTaGGTCTCCAACAAACTGCTCCAGATACTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: IDIKFCKFMPGF*VSNKLLQILIQ Trigger: CTGAATGAGTATCTGGAGCAGTTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTATATCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 72 bp | CTGCATACTGCTGACAGTATAAGTGGTTATGTGGATTaGTCATCATCAGCTCCTCTAAGCAAAAAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LHTADSISGYVD*SSSAPLSKKLL Trigger: AAGCAGCTTTTTGCTTAGAGGAGCTGATGATGACAAATCCACATAACCACTTATACTGTCAGCAGTATGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 72 bp | CTTACTTCGACCTGCAAACTGATAAGCCCTGTTTATTaGATTAGCGGCCCAACTAGCATATTTGATGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LTSTCKLISPVY*ISGPTSIFDVV Trigger: GACAACATCAAATATGCTAGTTGGGCCGCTAATCAAATAAACAGGGCTTATCAGTTTGCAGGTCGAAGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS GCA 72 bp | TTTTGCACTTGCTTTTGGATTAGAAGCAATATGACTTaGAGACATGTAGAGCCCAAACAGAGCTCTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: FCTCFWIRSNMT*RHVEPKQSSHV Trigger: AACATGAGAGCTCTGTTTGGGCTCTACATGTCTGCAAGTCATATTGCTTCTAATCCAAAAGCAAGTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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| CDS CAA 72 bp | GTTAGTTGGATCTTCTTGCAAAATCCGATCATACAGTaGTATAGCATCGTCATATCTTTCCATAGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSWIFLQNPIIQ*YSIVISFHSFK Trigger: TTTGAAGCTATGGAAAGATATGACGATGCTATACAACTGTATGATCGGATTTTGCAAGAAGATCCAACTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022962.8 |
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