Pregenerated sensors for ELP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054836Ensembl transcript IDs: ENSMUST00000068071.12, ENSMUST00000198247.5, ENSMUST00000199114.2, ENSMUST00000199592.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTGACCCTGGTCTCCATGAGTGCAGGCTGGCAGGTACGGCTTTaGAGTCCAGTTCCAGCTCAATTGTCCTCAGCCTGCTCTGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: HLTLVSMSAGWQVRL*SPVPAQLSSACSEP Trigger: GGGCTCAGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTCCAAAGCCGTACCTGCCAGCCTGCACTCATGGAGACCAGGGTCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 90 bp | CTTCAGTGGGTGAGGGTGGGGACACCTGACCCTGGTCTCCATGAGTaGAGGCTGGCAGGTACGGCTTTGGAGTCCAGTTCCAGCTCAATT | + |
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Preference number: 1 (lower is better) Translates to: LQWVRVGTPDPGLHE*RLAGTALESSSSSI Trigger: AATTGAGCTGGAACTGGACTCCAAAGCCGTACCTGCCAGCCTGCACTCATGGAGACCAGGGTCAGGTGTCCCCACCCTCACCCACTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR TCA 90 bp | ACGGCTTTGGAGTCCAGTTCCAGCTCAATTGTCCTCAGCCTGCTCTaGGCCCCGAGTGTCCTCACCTCCATTTCCAAGCCCATCTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: TALESSSSSIVLSLL*APSVLTSISKPISL Trigger: TAAGGAGATGGGCTTGGAAATGGAGGTGAGGACACTCGGGGCTCAGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTCCAAAGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 90 bp | AGTGCCATGCTTTTGATGGCTAGGACTCCAGCATACAGGCCAAGCTaGAGAGACAGAAGCAGGTTTACACCTTCAGTGGGTGAGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SAMLLMARTPAYRPS*RDRSRFTPSVGEGG Trigger: CCCACCCTCACCCACTGAAGGTGTAAACCTGCTTCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAGCATGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR TCA 90 bp | GTCATACTCCCCTCTCCCTCATTCAAGGTCCCAGTGCCATGCTTTTaGTGGCTAGGACTCCAGCATACAGGCCAAGCTGCAGAGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: VILPSPSFKVPVPCF*WLGLQHTGQAAETE Trigger: TTCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAGCATGGCACTGGGACCTTGAATGAGGGAGAGGGGAGTATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 90 bp | AAAAAGACAACCTCCAGGAAGCCTGTGTGGGAACCTTCTTTATTCTaGCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KKTTSRKPVWEPSLF*LIVLAVSQDGCHSR Trigger: TCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAAAGAAGGTTCCCACACAGGCTTCCTGGAGGTTGTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCGTCCACCAACAGCACTaGGTACTTCCATGGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ALQYCMKSSTATAPTPRLVHQQH*VLPWGL Trigger: GAGTCCCCATGGAAGTACCCAGTGCTGTTGGTGGAC...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCACAACCTCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCATGCTGGGGTTCACCTTaGAGCCTCTCTCAGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: WHNLQKQAGEAGVMWDAPCWGSP*SLSQHK Trigger: CTTATGCTGAGAGAGGCTGCAAGGTGAACCCCAGCA...TGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGAGGTTGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCATACTCCCCTCTCCCTCATTCAAGGTCCCAGTGCCATGCTTTTGATGGCTCCTGGTCTCCATGAGTaGAGGCTGGCAGGTACGGCT | + |
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Preference number: 2 (lower is better) Translates to: SHTPLSLIQGPSAMLLMAPGLHE*RLAGTA Trigger: AGCCGTACCTGCCAGCCTGCACTCATGGAGACCAGG...AGCCATCAAAAGCATGGCACTGGGACCTTGAATGAGGGAGAGGGGAGTATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR GCA 90 bp | CTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTCCTGATCCCAAAGGTTGGCTCTaGTGGGGTTCACCTTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LIVLAVSQDGCHSRQPPDPKGWL*WGSPCS Trigger: GCTGCAAGGTGAACCCCAGCAGAGCCAACCTTTGGG...ATCAGGAGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR CAA 90 bp | AGTCATACTCCCCTCTCCCTCATTCAAGGTCCCAGTGCCATGCTTTaGATGGCTAGGACTCCAGCATACAGGCCAAGCTGCAGAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SHTPLSLIQGPSAML*MARTPAYRPSCRDR Trigger: TCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAGCATGGCACTGGGACCTTGAATGAGGGAGAGGGGAGTATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR GCA 90 bp | GGAACCTTCTTTATTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATGCTGGGGTTCACCTTaGAGCCTCTCTCAGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: GTFFILPHCPSCQPGWLPCWGSP*SLSQHK Trigger: CTTATGCTGAGAGAGGCTGCAAGGTGAACCCCAGCA...TGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAAAGAAGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGGGAATCTCTGTGAGCTCCAGGCCAGCCTAGTCTACATAGCAAGTTCCAGCCCATCTCCTTACTaGACTTCAAGGAAAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: RQGNLCELQASLVYIASSSPSPY*TSRKSP Trigger: GGGACTTTTCCTTGAAGTCCAGTAAGGAGATGGGCT...GGAACTTGCTATGTAGACTAGGCTGGCCTGGAGCTCACAGAGATTCCCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGCCTAGTCTACATAGCAAGTTCCAGGCCAGCAAGGGCTACATAGAAGAAGCATACAGGCCAAGCTaGAGAGACAGAAGCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GQPSLHSKFQASKGYIEEAYRPS*RDRSRF Trigger: AAACCTGCTTCTGTCTCTGCAGCTTGGCCTGTATGC...TTCTTCTATGTAGCCCTTGCTGGCCTGGAACTTGCTATGTAGACTAGGCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATGCATTACAGTAACTCACCAAGCTGTCAGCCAGGATaGCTGCCATTCAAGACAACC | + |
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Preference number: 2 (lower is better) Translates to: TSFLLSPLSSKMHYSNSPSCQPG*LPFKTT Trigger: GGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCT...TGGTGAGTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCCTAGTCTACATAGCAAGTTCCAGGCCAGCAAGGGCTACATAGAAGAAACAGACCAAAAAGACTaGTTCCAAGACCTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GQPSLHSKFQASKGYIEETDQKD*FQDLLP Trigger: AGGAAGGAGGTCTTGGAACCAGTCTTTTTGGTCTGT...TTCTTCTATGTAGCCCTTGCTGGCCTGGAACTTGCTATGTAGACTAGGCTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATGCATTACAGTAACTCACCATCCTTCTATCTACAGTaGCTCTTAATGGCACAACCT | + |
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Preference number: 2 (lower is better) Translates to: TSFLLSPLSSKMHYSNSPSFYLQ*LLMAQP Trigger: AGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGA...TGGTGAGTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR TCA 72 bp | TCAGTTCGCAGCACACCGTGGCTCTGCAGTACTGCATaGAGTCCAGCACAGCGACTGCCCCCACGCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: SVRSTPWLCSTA*SPAQRLPPRPG Trigger: GCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGCCACGGTGTGCTGCGAACTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| 3UTR GCA 72 bp | CCCTTCAGTTCGCAGCACACCGTGGCTCTGCAGTACTaGATGAAGTCCAGCACAGCGACTGCCCCCACGCCC | + |
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Preference number: 3 (lower is better) Translates to: PFSSQHTVALQY*MKSSTATAPTP Trigger: GGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGCCACGGTGTGCTGCGAACTGAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCAGCAGCACACTGAGGTaGTCCACCAACAGCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: ALQYCMKSSTATAPTPRLSSTLR*STNSTG Trigger: CCCAGTGCTGTTGGTGGACAACCTCAGTGTGCTGCT...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| 3UTR GCA 72 bp | GTGAGGGTGGGGACACCTGACCCTGGTCTCCATGAGTaGAGGCTGGCAGGTACGGCTTTGGAGTCCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: VRVGTPDPGLHE*RLAGTALESSS Trigger: GGAACTGGACTCCAAAGCCGTACCTGCCAGCCTGCACTCATGGAGACCAGGGTCAGGTGTCCCCACCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR TCA 72 bp | GAGTCCAGTTCCAGCTCAATTGTCCTCAGCCTGCTCTaGGCCCCGAGTGTCCTCACCTCCATTTCCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: ESSSSSIVLSLL*APSVLTSISKP Trigger: GGGCTTGGAAATGGAGGTGAGGACACTCGGGGCTCAGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 72 bp | GGATGCCCCAAAGGTTGGCTCTGCTGGGGTTCACCTTaGAGCCTCTCTCAGCATAAGCCACGTGCAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GCPKGWLCWGSP*SLSQHKPRAVP Trigger: AGGAACTGCACGTGGCTTATGCTGAGAGAGGCTGCAAGGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR GCA 72 bp | GGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTaGTGGGGTTCACCTTGCAGCCTCTCTCAGCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: GWSHVGCPKGWL*WGSPCSLSQHK Trigger: CTTATGCTGAGAGAGGCTGCAAGGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR TCA 72 bp | CTGCAGAGACAGAAGCAGGTTTACACCTTCAGTGGGTaGGGGTGGGGACACCTGACCCTGGTCTCCATGAGT | + |
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Preference number: 3 (lower is better) Translates to: LQRQKQVYTFSG*GWGHLTLVSMS Trigger: ACTCATGGAGACCAGGGTCAGGTGTCCCCACCCTCACCCACTGAAGGTGTAAACCTGCTTCTGTCTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR CCA 72 bp | CAAGCTGCAGAGACAGAAGCAGGTTTACACCTTCAGTaGGTGAGGGTGGGGACACCTGACCCTGGTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: QAAETEAGLHLQ*VRVGTPDPGLH Trigger: ATGGAGACCAGGGTCAGGTGTCCCCACCCTCACCCACTGAAGGTGTAAACCTGCTTCTGTCTCTGCAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR TCA 72 bp | CCCTCTCCCTCATTCAAGGTCCCAGTGCCATGCTTTTaGTGGCTAGGACTCCAGCATACAGGCCAAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PSPSFKVPVPCF*WLGLQHTGQAA Trigger: TGCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAGCATGGCACTGGGACCTTGAATGAGGGAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 72 bp | CTTTGGAGTCCAGTTCCAGCTCAATTGTCCTCAGCCTaGTCTGAGCCCCGAGTGTCCTCACCTCCATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LWSPVPAQLSSA*SEPRVSSPPFP Trigger: TGGAAATGGAGGTGAGGACACTCGGGGCTCAGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTCTATCTACAGTGGCTCTTAATGGCACAACCTCCAAAAACAGGCAGGTGGGGATGCCCCAAAGGTaGGCTCTGCTGGGGTTCACC | + |
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Preference number: 3 (lower is better) Translates to: LLLSTVALNGTTSKNRQVGMPQR*ALLGFT Trigger: GGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCCC...CACCTGCCTGTTTTTGGAGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR GCA 72 bp | ACCTCCAGGAAGCCTGTGTGGGAACCTTCTTTATTCTaGCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TSRKPVWEPSLF*LIVLAVSQDGC Trigger: GCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAAAGAAGGTTCCCACACAGGCTTCCTGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 72 bp | TTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTaGCATTCAAGACAACCTCCTGATGGCCTCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: FCLIVLAVSQDG*HSRQPPDGLLL Trigger: TAGAAGGAGGCCATCAGGAGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR GCA 72 bp | CTTTTGATGGCTAGGACTCCAGCATACAGGCCAAGCTaGAGAGACAGAAGCAGGTTTACACCTTCAGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LLMARTPAYRPS*RDRSRFTPSVG Trigger: ACCCACTGAAGGTGTAAACCTGCTTCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR-3UTR CAA 90 bp | ACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATGCATTACAGTAACTCACCACCCAGTGCCATGCTTTaGATGGCTAGGACTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: TSFLLSPLSSKMHYSNSPPSAML*MARTPA Trigger: TGCTGGAGTCCTAGCCATCAAAAGCATGGCACTGGG...TGGTGAGTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR CCA 72 bp | CAAGACAACCTCCTGATGGCCTCCTTCTATCTACAGTaGCTCTTAATGGCACAACCTCCAAAAACAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QDNLLMASFYLQ*LLMAQPPKTGR Trigger: CCTGCCTGTTTTTGGAGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGAGGCCATCAGGAGGTTGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR CCA 72 bp | AACACACAGACACACAGACACACAGACCAAAAAGACTaGTTCCAAGACCTCCTTCCTCTTGTCCCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: NTQTHRHTDQKD*FQDLLPLVPTV Trigger: GACAGTGGGGACAAGAGGAAGGAGGTCTTGGAACCAGTCTTTTTGGTCTGTGTGTCTGTGTGTCTGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 72 bp | AGACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATaGATTACAGTAACTCACCATGATCCTTCTAACCAG | + |
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Preference number: 3 (lower is better) Translates to: RPPSSCPHCLQR*ITVTHHDPSNQ Trigger: CTGGTTAGAAGGATCATGGTGAGTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| 3UTR GCA 72 bp | CAGCAAGGGCTACATAGAAGAAACCTAGTCTCAATTTaGCCTCCAAAACACACAGACACACAGACACACAGA | + |
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Preference number: 3 (lower is better) Translates to: QQGLHRRNLVSI*PPKHTDTQTHR Trigger: TCTGTGTGTCTGTGTGTCTGTGTGTTTTGGAGGGCAAATTGAGACTAGGTTTCTTCTATGTAGCCCTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| CDS-3UTR GCA 90 bp | TGGCACAACCTCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAGTCCAGCACAGCGACTaGCCCCACGCCCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: WHNLQKQAGEAGVMWDAPVQHSD*PHAQAQ Trigger: CTGAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGAC...TGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGAGGTTGTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS-3UTR TCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCCCTCCACAGAGGACTTaGGACCCTCCAGGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: ALQYCMKSSTATAPTPRLPPQRT*DPPGTQ Trigger: TTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGG...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| CDS-3UTR CCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCCTGCTCGGTCTTGTCTaGGGTGGTGCTGAGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ALQYCMKSSTATAPTPRLLLGLV*GGAEKV Trigger: AACCTTCTCAGCACCACCCCAGACAAGACCGAGCAG...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| CDS-3UTR TCA 90 bp | AACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTGCTGCTGTACCAGCCTCCCTaGGAAACTGCAGGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NRQVRLESCGMPQRLALLLYQPP*ETAGGE Trigger: CTCACCCCCTGCAGTTTCTCAGGGAGGCTGGTACAG...CAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS-3UTR GCA 90 bp | TGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTCCTGTCCAGCACAGCGACTaGCCCCACGCCCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLIVLAVSQDGCHSRQPPVQHSD*PHAQAQ Trigger: CTGAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGAC...AGGAGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| 3UTR CAA 72 bp | CAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTaGGCTCTGCTGGGGTTCACCTTGCAGCCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QVRLESCGMPQR*ALLGFTLQPLS Trigger: TGAGAGAGGCTGCAAGGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS-3UTR TCA 90 bp | AACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTGCTGGGCTCAGCAGCACACTaGGGTTGTCCACCAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: NRQVRLESCGMPQRLALLGSAAH*GCPPTA Trigger: TGCTGTTGGTGGACAACCTCAGTGTGCTGCTGAGCC...CAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS-3UTR CCA 90 bp | TCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCCTTGCAGAATCCAGTaGCCAGGCCCTCAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SKNRQVRLESCGMPQRLAPCRIQ*PGPQPA Trigger: TGCGGGCTGAGGGCCTGGCCACTGGATTCTGCAAGG...AGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS-3UTR GCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCAAGGAAAGGAAGTGGTaGACAAGGAAGCTGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: ALQYCMKSSTATAPTPRLKERKW*TRKLPS Trigger: AGATGGCAGCTTCCTTGTGCACCACTTCCTTTCCTT...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
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| CDS-3UTR GCA 90 bp | TGGCAGGTACGGCTTTGGAGTCCAGTTCCAGCTCAATTGTCCTCAGCCTGCTCTGCCCATGCACGTCCTTaGAGAATCCAGTGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WQVRLWSPVPAQLSSACSAHARP*RIQWPG Trigger: GCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGC...AGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTCCAAAGCCGTACCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| CDS-3UTR GCA 90 bp | TCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTGCCCATGCACGTCCTTaGAGAATCCAGTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKNRQVRLESCGMPQRLAAHARP*RIQWPG Trigger: GCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGC...AGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CCA 90 bp | CAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTAGCGTCCCGATCTTCTaGGCTCCTCCAAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQAGEAGVMWDAPKVGSSVPIF*APPRAW Trigger: CCAAGCCCTTGGAGGAGCCCAGAAGATCGGGACGCT...AGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR CCA 90 bp | GGACTCCAGCATACAGGCCAAGCTGCAGAGACAGAAGCAGGTTTACACCTTCAGCCTTGCAGAATCCAGTaGCCAGGCCCTCAGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQHTGQAAETEAGLHLQPCRIQ*PGPQPA Trigger: TGCGGGCTGAGGGCCTGGCCACTGGATTCTGCAAGG...CTGAAGGTGTAAACCTGCTTCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTGCTGGGGTTCACCTTGCTGCTCGGTCTTGTCTaGGGTGGTGCTGAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLESCGMPQRLALLGFTLLLGLV*GGAEKV Trigger: AACCTTCTCAGCACCACCCCAGACAAGACCGAGCAG...CAAGGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199592.5 |
||
| 3UTR CAA 72 bp | TGGCAGGTACGGCTTTGGAGTCCAGTTCCAGCTCAATaGTCCTCAGCCTGCTCTGAGCCCCGAGTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WQVRLWSPVPAQ*SSACSEPRVSS Trigger: TGAGGACACTCGGGGCTCAGAGCAGGCTGAGGACAATTGAGCTGGAACTGGACTCCAAAGCCGTACCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCCAATATTGTAATGGCTaGAGGACTGGACAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQYCMKSSTATAPTPRLQYCNG*RTGQVP Trigger: TGGCACTTGTCCAGTCCTTCAGCCATTACAATATTG...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCGAAGGACTGGACAAGTaGCACAAAGCAGACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ALQYCMKSSTATAPTPRLEGLDK*HKADFT Trigger: TGTAAAGTCTGCTTTGTGGCACTTGTCCAGTCCTTC...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTGCCTCCGCCAGAGGATaGTCAGCTGCCCATGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLIVLAVSQDGCHSRQPASARG*SAAHAR Trigger: ACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGC...AGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| 3UTR CAA 72 bp | CCCCTCTCCCTCATTCAAGGTCCCAGTGCCATGCTTTaGATGGCTAGGACTCCAGCATACAGGCCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLIQGPSAML*MARTPAYRPSC Trigger: GCAGCTTGGCCTGTATGCTGGAGTCCTAGCCATCAAAAGCATGGCACTGGGACCTTGAATGAGGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR GCA 90 bp | CACAACCTCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTGGCTCTGCAGTACTaGATGAAGTCCAGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HNLQKQAGEAGVMWDAPKVALQY*MKSSTA Trigger: CGCTGTGCTGGACTTCATGCAGTACTGCAGAGCCAC...CTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGAGGTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | CCTGATGGCCTCCTTCTATCTACAGTGGCTCTTAATGGCACAACCTCCAAAAACGCCTCCGCCAGAGGATaGTCAGCTGCCCATGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PDGLLLSTVALNGTTSKNASARG*SAAHAR Trigger: ACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGC...GTTTTTGGAGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGAGGCCATCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CCA 90 bp | TGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTCCTGTCCACCAACAGCACTaGGTACTTCCATGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CLIVLAVSQDGCHSRQPPVHQQH*VLPWGL Trigger: GAGTCCCCATGGAAGTACCCAGTGCTGTTGGTGGAC...AGGAGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR TCA 90 bp | CCTGATGGCCTCCTTCTATCTACAGTGGCTCTTAATGGCACAACCTCCAAAAACCTGTACCAGCCTCCCTaGGAAACTGCAGGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDGLLLSTVALNGTTSKNLYQPP*ETAGGE Trigger: CTCACCCCCTGCAGTTTCTCAGGGAGGCTGGTACAG...GTTTTTGGAGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGAGGCCATCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | GGCACAACCTCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAAGGAAAGGAAGTGGTaGACAAGGAAGCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTSKNRQVRLESCGMPQKERKW*TRKLPS Trigger: AGATGGCAGCTTCCTTGTGCACCACTTCCTTTCCTT...TTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGAGGTTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | GGCACAACCTCCAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAACGTATACAGTGACTaGAGGTTTCCTGTACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTTSKNRQVRLESCGMPQNVYSD*RFPVPA Trigger: GGCTGGTACAGGAAACCTGCAGTCACTGTATACGTT...TTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTGGAGGTTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTGTGGCTCTGCAGTACTaGATGAAGTCCAGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FCLIVLAVSQDGCHSRQPVALQY*MKSSTA Trigger: CGCTGTGCTGGACTTCATGCAGTACTGCAGAGCCAC...AGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCTTTATTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAGTCCACCAACAGCACTaGGTACTTCCATGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLFCLIVLAVSQDGCHSVHQQH*VLPWGL Trigger: GAGTCCCCATGGAAGTACCCAGTGCTGTTGGTGGAC...TGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATGCATTACAGTAACTCACCAGGCTCAGCAGCACACTaGGGTTGTCCACCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFLLSPLSSKMHYSNSPGSAAH*GCPPTA Trigger: TGCTGTTGGTGGACAACCTCAGTGTGCTGCTGAGCC...TGGTGAGTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR GCA 90 bp | GGACTCCAGCATACAGGCCAAGCTGCAGAGACAGAAGCAGGTTTACACCTTCAGAACGTATACAGTGACTaGAGGTTTCCTGTACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQHTGQAAETEAGLHLQNVYSD*RFPVPA Trigger: GGCTGGTACAGGAAACCTGCAGTCACTGTATACGTT...CTGAAGGTGTAAACCTGCTTCTGTCTCTGCAGCTTGGCCTGTATGCTGGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCCTCCTTCTATCTACAGTGGCTCTTAATGGCACAACCTCCAAAAACACCTCCACAGAGGACTTaGGACCCTCCAGGAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LMASFYLQWLLMAQPPKTPPQRT*DPPGTQ Trigger: TTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGG...TGTTTTTGGAGGTTGTGCCATTAAGAGCCACTGTAGATAGAAGGAGGCCATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | CTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACCTCCTGATAAGGAAAGGAAGTGGTaGACAAGGAAGCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVLAVSQDGCHSRQPPDKERKW*TRKLPS Trigger: AGATGGCAGCTTCCTTGTGCACCACTTCCTTTCCTT...ATCAGGAGGTTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGCATAAGCCACGTGCAGTTCCTCACTGTGTTTCCTAAGCAGAGCCCTGAAGGACTGGACAAGTaGCACAAAGCAGACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSISHVQFLTVFPKQSPEGLDK*HKADFT Trigger: TGTAAAGTCTGCTTTGTGGCACTTGTCCAGTCCTTC...AGGGCTCTGCTTAGGAAACACAGTGAGGAACTGCACGTGGCTTATGCTGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGCAATATTGTAATGGCTaGAGGACTGGACAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFILPHCPSCQPGWLPFKQYCNG*RTGQVP Trigger: TGGCACTTGTCCAGTCCTTCAGCCATTACAATATTG...CTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR TCA 90 bp | TTATTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAACAATATTGTAATGGCTaGAGGACTGGACAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFCLIVLAVSQDGCHSRQQYCNG*RTGQVP Trigger: TGGCACTTGTCCAGTCCTTCAGCCATTACAATATTG...TTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| 3UTR CAA 72 bp | CAGACCAAAAAGACTGGTTCCAAGACCTCCTTCCTCTaGTCCCCACTGTCTTCAAAGATGCATTACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTKKTGSKTSFL*SPLSSKMHYSN Trigger: GTTACTGTAATGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGTCTTGGAACCAGTCTTTTTGGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS GCA 90 bp | TTTGAGCCCGCTGGGCTGTGGACCGCGACGGCCTCCGCCAGAGGATaGTCAGCTGCCCATGCACGTCCTTGCAGAATCCAGTGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FEPAGLWTATASARG*SAAHARPCRIQWPG Trigger: GCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGCCGTCGCGGTCCACAGCCCAGCGGGCTCAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCGTCCCCTGCTCGGTCTaGTCTGGGGTGGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALQYCMKSSTATAPTPRLVPCSV*SGVVLR Trigger: TCTCAGCACCACCCCAGACAAGACCGAGCAGGGGAC...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
||
| CDS TCA 90 bp | GGTGAGGCTCGTCCTGAGAGTGGAAGAGGACCTCCACAGAGGACTTaGGACCCTCCAGGAACACAAGCTGCCCTCTGTCCCGAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GEARPESGRGPPQRT*DPPGTQAALCPEPL Trigger: CAGCGGCTCGGGACAGAGGGCAGCTTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGTCCTCTTCCACTCTCAGGACGAGCCTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068071.12 ENSMUST00000198247.5 ENSMUST00000199114.2 ENSMUST00000199592.5 |
||
| CDS GCA 90 bp | ACCACGTTTCCCTTCAGTTCGCAGCACACCGTGGCTCTGCAGTACTaGATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTFPFSSQHTVALQY*MKSSTATAPTPRLS Trigger: GCTGAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGCCACGGTGTGCTGCGAACTGAAGGGAAACGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS CCA 90 bp | CACGCCCAGGCTCAGCAGCACACTGAGGTTGTCCACCAACAGCACTaGGTACTTCCATGGGGACTCCTCACTGTCCGCAGGCTTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HAQAQQHTEVVHQQH*VLPWGLLTVRRLQG Trigger: ACCCTGAAGCCTGCGGACAGTGAGGAGTCCCCATGGAAGTACCCAGTGCTGTTGGTGGACAACCTCAGTGTGCTGCTGAGCCTGGGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCAGTACTGCATGAAGTCCAGCACAGCGACTGCCCCCACGCCCAGGCTCACCTCCACAGAGGACTaGAGACCCTCCAGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: ALQYCMKSSTATAPTPRLTSTED*RPSRNT Trigger: TGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGT...GAGCCTGGGCGTGGGGGCAGTCGCTGTGCTGGACTTCATGCAGTACTGCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198247.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGTTGGCTCTGCTGGGGTTCACCTTGCAGCCTCTCTCAGCATAAGCCACTGCCCATGCACGTCCTaGCAGAATCCAGTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKVGSAGVHLAASLSISHCPCTS*QNPVAR Trigger: CCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCA...GTGGCTTATGCTGAGAGAGGCTGCAAGGTGAACCCCAGCAGAGCCAACCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | CAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTGTCCCCTGCTCGGTCTaGTCTGGGGTGGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKQAGEAGVMWDAPKVGSVPCSV*SGVVLR Trigger: TCTCAGCACCACCCCAGACAAGACCGAGCAGGGGAC...AGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000199592.5 |
||
| CDS GCA 90 bp | AAGAGGACCTCCACAGAGGACTTGAGACCCTCCAGGAACACAAGCTaGCCTCTGTCCCGAGCCGCTGTCAAGCTGACACCCAGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRTSTEDLRPSRNTS*PLSRAAVKLTPSFC Trigger: ACAGAAACTGGGTGTCAGCTTGACAGCGGCTCGGGACAGAGGGCAGCTTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGTCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068071.12 ENSMUST00000198247.5 ENSMUST00000199114.2 ENSMUST00000199592.5 |
||
| CDS GCA 90 bp | AAGCTGCCATCTGTCTTAGCGTCACAGAGGAGAGTCAGCGTCCCCTaGTCGGTCTTGTCTGGGGTGGTGCTGAGAAGGTTGTTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLPSVLASQRRVSVP*SVLSGVVLRRLLSS Trigger: GGAACTCAACAACCTTCTCAGCACCACCCCAGACAAGACCGAGCAGGGGACGCTGACTCTCCTCTGTGACGCTAAGACAGATGGCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198247.5 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | CAAAAACAGGCAGGTGAGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTAGCAGCACACTGAGGTaGTCCACCAACAGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QKQAGEAGVMWDAPKVGSSSTLR*STNSTG Trigger: CCCAGTGCTGTTGGTGGACAACCTCAGTGTGCTGCT...AGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCTCACCTGCCTGTTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | CACACAGACCAAAAAGACTGGTTCCAAGACCTCCTTCCTCTTGTCCCCACTGTCAGCAGCACACTGAGGTaGTCCACCAACAGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTDQKDWFQDLLPLVPTVSSTLR*STNSTG Trigger: CCCAGTGCTGTTGGTGGACAACCTCAGTGTGCTGCT...GACAGTGGGGACAAGAGGAAGGAGGTCTTGGAACCAGTCTTTTTGGTCTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGAGTCATGTGGGATGCCCCAAAGGTTGGCTCTGCTGGGGTTCACCTTGGTCCTGTATCTTGTATaGGTAAGTGAGACTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLESCGMPQRLALLGFTLVLYLV*VSETLS Trigger: GCTCAAAGTCTCACTTACCAATACAAGATACAGGAC...CAAGGTGAACCCCAGCAGAGCCAACCTTTGGGGCATCCCACATGACTCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGTTCCAAGACCTCCTTCCTCTTGTCCCCACTGTCTTCAAAGATGCAACCTCCACAGAGGACTaGAGACCCTCCAGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KDWFQDLLPLVPTVFKDATSTED*RPSRNT Trigger: TGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGT...TGCATCTTTGAAGACAGTGGGGACAAGAGGAAGGAGGTCTTGGAACCAGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGCCTCATTGTCCTAGCTGTCAGCCAGGATGGCTGCCATTCAAGACAAACCTCCACAGAGGACTaGAGACCCTCCAGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LFCLIVLAVSQDGCHSRQTSTED*RPSRNT Trigger: TGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGT...TTGTCTTGAATGGCAGCCATCCTGGCTGACAGCTAGGACAATGAGGCAGAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS-3UTR CAA 90 bp | TCCATTTCCAAGCCCATCTCCTTACTGGACTTCAAGGAAAAGTCCCCATGTAAATGCCCATGCACGTCCTaGCAGAATCCAGTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SISKPISLLDFKEKSPCKCPCTS*QNPVAR Trigger: CCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCA...TTTACATGGGGACTTTTCCTTGAAGTCCAGTAAGGAGATGGGCTTGGAAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
||
| CDS CAA 90 bp | CGCGACGGCCTCCGCCAGAGGATGCTCAGCTGCCCATGCACGTCCTaGCAGAATCCAGTGGCCAGGCCCTCAGCCCGCAGGATCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RDGLRQRMLSCPCTS*QNPVARPSARRIRW Trigger: CCACCTGATCCTGCGGGCTGAGGGCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGCCGTCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS GCA 72 bp | CGCGACGGCCTCCGCCAGAGGATGCTCAGCTGCCCATaGACGTCCTTGCAGAATCCAGTGGCCAGGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDGLRQRMLSCP*TSLQNPVARPS Trigger: TGAGGGCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGCCGTCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS GCA 72 bp | GTGGACCGCGACGGCCTCCGCCAGAGGATGCTCAGCTaGCCATGCACGTCCTTGCAGAATCCAGTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VDRDGLRQRMLS*PCTSLQNPVAR Trigger: CCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGCCGTCGCGGTCCAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
||
| CDS GCA 72 bp | GCTGGGCTGTGGACCGCGACGGCCTCCGCCAGAGGATaGTCAGCTGCCCATGCACGTCCTTGCAGAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: AGLWTATASARG*SAAHARPCRIQ Trigger: CTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAGGCCGTCGCGGTCCACAGCCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS CAA 72 bp | CTCCGCCAGAGGATGCTCAGCTGCCCATGCACGTCCTaGCAGAATCCAGTGGCCAGGCCCTCAGCCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRQRMLSCPCTS*QNPVARPSARR Trigger: CCTGCGGGCTGAGGGCCTGGCCACTGGATTCTGCAAGGACGTGCATGGGCAGCTGAGCATCCTCTGGCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS GCA 72 bp | TCCACAGAGGACTTGAGACCCTCCAGGAACACAAGCTaGCCTCTGTCCCGAGCCGCTGTCAAGCTGACACCC | + |
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Preference number: 6 (lower is better) Translates to: STEDLRPSRNTS*PLSRAAVKLTP Trigger: GGGTGTCAGCTTGACAGCGGCTCGGGACAGAGGGCAGCTTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068071.12 ENSMUST00000198247.5 ENSMUST00000199114.2 ENSMUST00000199592.5 |
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| CDS TCA 72 bp | CGTCCTGAGAGTGGAAGAGGACCTCCACAGAGGACTTaGGACCCTCCAGGAACACAAGCTGCCCTCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RPESGRGPPQRT*DPPGTQAALCP Trigger: GGGACAGAGGGCAGCTTGTGTTCCTGGAGGGTCTCAAGTCCTCTGTGGAGGTCCTCTTCCACTCTCAGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068071.12 ENSMUST00000198247.5 ENSMUST00000199114.2 ENSMUST00000199592.5 |
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| CDS CCA 72 bp | TTAGCGTCACAGAGGAGAGTCAGCGTCCCGATCTTCTaGGCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LASQRRVSVPIF*APPRAWVTSPA Trigger: GGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGGGACGCTGACTCTCCTCTGTGACGCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068071.12 |
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| CDS CAA 72 bp | GCGTCACAGAGGAGAGTCAGCGTCCCCTGCTCGGTCTaGTCTGGGGTGGTGCTGAGAAGGTTGTTGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASQRRVSVPCSV*SGVVLRRLLSS Trigger: GGAACTCAACAACCTTCTCAGCACCACCCCAGACAAGACCGAGCAGGGGACGCTGACTCTCCTCTGTGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198247.5 ENSMUST00000199592.5 |
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| CDS CCA 72 bp | ACTGAGGTTGTCCACCAACAGCACTGGGTACTTCCATaGGGACTCCTCACTGTCCGCAGGCTTCAGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TEVVHQQHWVLP*GLLTVRRLQGV Trigger: GACACCCTGAAGCCTGCGGACAGTGAGGAGTCCCCATGGAAGTACCCAGTGCTGTTGGTGGACAACCTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068071.12 ENSMUST00000199114.2 ENSMUST00000199592.5 |
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| CDS CCA 72 bp | ACAGAGGAGAGTCAGCGTCCCCTGCTCGGTCTTGTCTaGGGTGGTGCTGAGAAGGTTGTTGAGTTCCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TEESQRPLLGLV*GGAEKVVEFRK Trigger: TTTCCGGAACTCAACAACCTTCTCAGCACCACCCCAGACAAGACCGAGCAGGGGACGCTGACTCTCCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198247.5 ENSMUST00000199592.5 |
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| CDS TCA 72 bp | TATACAGTGACTGCAGGTTTCCTGTACCAGCCTCCCTaGGAAACTGCAGGGGGTGAGGCTCGTCCTGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: YTVTAGFLYQPP*ETAGGEARPES Trigger: ACTCTCAGGACGAGCCTCACCCCCTGCAGTTTCTCAGGGAGGCTGGTACAGGAAACCTGCAGTCACTGTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068071.12 ENSMUST00000199114.2 ENSMUST00000199592.5 |
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| CDS CAA 72 bp | ATTCTTGTCCTGTATCTTGTATTGGTAAGTGAGACTTaGAGCCCGCTGGGCTGTGGACCGCGACGGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ILVLYLVLVSET*SPLGCGPRRPP Trigger: CGGAGGCCGTCGCGGTCCACAGCCCAGCGGGCTCAAAGTCTCACTTACCAATACAAGATACAGGACAAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS CAA 90 bp | AAAGGACACATTCTTGTCCTGTATCTTGTATTGGTAAGTGAGACTTaGAGCCCGCTGGGCTGTGGACCGCGACGGCCTCCGCCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: KGHILVLYLVLVSET*SPLGCGPRRPPPED Trigger: ATCCTCTGGCGGAGGCCGTCGCGGTCCACAGCCCAGCGGGCTCAAAGTCTCACTTACCAATACAAGATACAGGACAAGAATGTGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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| CDS GCA 72 bp | AGATTCAGGACAGATAAAAGGATCTCCTCTAGGGCCTaGTCTGCAACCATCTTTGGGCGCCAGTGTGGCACG | + |
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Preference number: 6 (lower is better) Translates to: RFRTDKRISSRA*SATIFGRQCGT Trigger: CGTGCCACACTGGCGCCCAAAGATGGTTGCAGAGCAGGCCCTAGAGGAGATCCTTTTATCTGTCCTGAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199114.2 |
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| CDS TCA 72 bp | GGGGACTCCTCACTGTCCGCAGGCTTCAGGGTGTCCTaGATAAACGTATACAGTGACTGCAGGTTTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GDSSLSAGFRVS*INVYSDCRFPV Trigger: TACAGGAAACCTGCAGTCACTGTATACGTTTATTCAGGACACCCTGAAGCCTGCGGACAGTGAGGAGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068071.12 ENSMUST00000199114.2 ENSMUST00000199592.5 |
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| CDS TCA 72 bp | AGGACACATTCTTGTCCTGTATCTTGTATTGGTAAGTaGGACTTTGAGCCCGCTGGGCTGTGGACCGCGACG | + |
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Preference number: 6 (lower is better) Translates to: RTHSCPVSCIGK*DFEPAGLWTAT Trigger: CGTCGCGGTCCACAGCCCAGCGGGCTCAAAGTCTCACTTACCAATACAAGATACAGGACAAGAATGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068071.12 ENSMUST00000199592.5 |
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