Pregenerated sensors for ELP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027167Ensembl transcript IDs: ENSMUST00000028588.4, ENSMUST00000122965.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAGACATTTTGCATGGTCAGATATCATTTACAGGCTCAGCCAGTaGTCCTGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PRHFAWSDIIYRLSQ*SWLTKAQWKSECVS Trigger: TGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAAATGTCTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 90 bp | TTACCCAGAACTTCAGAGTCTTCCTGCCTGCTTCCCATCAAGTCCTaGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAATCACCA | + |
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Preference number: 1 (lower is better) Translates to: LPRTSESSCLLPIKS*MYCLMCWVMQTESP Trigger: TGGTGATTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAGCAGGCAGGAAGACTCTGAAGTTCTGGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 90 bp | CAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAATGGAAGTCTaGGTGTGTCTCAGTTACTTACGTTGTCTTAGACCTAGATTATAT | + |
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Preference number: 1 (lower is better) Translates to: QAQPVLLVNKGTMEV*VCLSYLRCLRPRLY Trigger: ATATAATCTAGGTCTAAGACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 90 bp | TCCTGCCTGCTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTaGGTAATGCAGACTGAATCACCACATATGATTTTTGTCTTCACC | + |
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Preference number: 1 (lower is better) Translates to: SCLLPIKSWMYCLMC*VMQTESPHMIFVFT Trigger: GGTGAAGACAAAAATCATATGTGGTGATTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAGCAGGCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 90 bp | ATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAATaGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCTTAGACCTA | + |
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Preference number: 1 (lower is better) Translates to: IIYRLSQCSWLTKAQ*KSECVSVTYVVLDL Trigger: TAGGTCTAAGACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 90 bp | CATTTTGCATGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTaGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACT | + |
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Preference number: 1 (lower is better) Translates to: HFAWSDIIYRLSQCS*LTKAQWKSECVSVT Trigger: AGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR GCA 90 bp | TCTTCCTGCCTGCTTCCCATCAAGTCCTGGATGTATTGTCTAATGTaGTGGGTAATGCAGACTGAATCACCACATATGATTTTTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSCLLPIKSWMYCLM*WVMQTESPHMIFVF Trigger: GAAGACAAAAATCATATGTGGTGATTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAGCAGGCAGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 90 bp | CATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTaGATCACCACATATGATTTTTGTCTTCACCATTTTCAACAATGG | + |
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Preference number: 1 (lower is better) Translates to: HQVLDVLSNVLGNAD*ITTYDFCLHHFQQW Trigger: CCATTGTTGAAAATGGTGAAGACAAAAATCATATGTGGTGATTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 90 bp | TCACTTCAGTTTATTCACAACCCATTAGAGGACAGCAGGACTTCCTaGGTACCTCTGCAACAAGACTTAAAATTTATAGAGGAAATCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLQFIHNPLEDSRTS*VPLQQDLKFIEEIN Trigger: ATTGATTTCCTCTATAAATTTTAAGTCTTGTTGCAGAGGTACCCAGGAAGTCCTGCTGTCCTCTAATGGGTTGTGAATAAACTGAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAATACAGGCTCAGCCAGTaGTCCTGGTTAACAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEYRLSQ*SWLTKA Trigger: TGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTA...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGACTTCAGAGTCTTCCTaGCTGCTTCCCATCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMTSESS*LLPIKS Trigger: GGACTTGATGGGAAGCAGGCAGGAAGACTCTGAAGT...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAACTTCCCATCAAGTCCTaGATGTATTGTCTAATGTGC | + |
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Preference number: 2 (lower is better) Translates to: QTLQDYGPMTPKPSVFQELPIKS*MYCLMC Trigger: GCACATTAGACAATACATCCAGGACTTGATGGGAAG...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGCTCAGCCAGTGCTCCTaGTTAACAAAGGCACAATGG | + |
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Preference number: 2 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMLSQCS*LTKAQW Trigger: CCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAG...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGGTGGAGCTGCCAGCTTaGATTTTGTCTGTTGACACA | + |
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Preference number: 2 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMVELPA*ILSVDT Trigger: TGTGTCAACAGACAAAATTCAAGCTGGCAGCTCCAC...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTTTGCATGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACGGCACAATGGAAGTCTaGGTGTGTCTCAGTTACTTA | + |
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Preference number: 2 (lower is better) Translates to: TFCMVRYHLQAQPVLLVNGTMEV*VCLSYL Trigger: TAAGTAACTGAGACACACTCAGACTTCCATTGTGCC...GTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAATCACCATCATCCCATTaGTATAGTCCACTTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: QTLQDYGPMTPKPSVFQESPSSH*YSPLEL Trigger: TAGTTCAAGTGGACTATAGCAATGGGATGATGGTGA...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCGGTGGCTCCACTTTGTaGCCTTGTATTTCTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: WLTKAQWKSECVSVTYVVGGSTL*PCISQS Trigger: ACTTTGAGAAATACAAGGTCACAAAGTGGAGCCACC...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAAGTATTTCTCAAAGTCTaGAGGGTCAGATCATTAAGA | + |
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Preference number: 2 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEVFLKV*RVRSLR Trigger: TCTTAATGATCTGACCCTCCAGACTTTGAGAAATAC...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACCTGGGTAATGCAGACTaGATCACCACATATGATTTT | + |
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Preference number: 2 (lower is better) Translates to: CSWLTKAQWKSECVSVTYLGNAD*ITTYDF Trigger: AAAATCATATGTGGTGATTCAGTCTGCATTACCCAG...GTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAATTTTCAACAATGGGATaGACAAATGCTAACTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEFSTMG*TNANSF Trigger: GAAAGAGTTAGCATTTGTGCATCCCATTGTTGAAAA...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAACAGCTAAATGTCAAATaGCAGTATTTCTGCCATATT | + |
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Preference number: 2 (lower is better) Translates to: LPIKSWMYCLMCWVMQTEQLNVK*QYFCHI Trigger: AATATGGCAGAAATACTGCCATTTGACATTTAGCTG...TTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 72 bp | AGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAATaGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: RLSQCSWLTKAQ*KSECVSVTYVV Trigger: GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 72 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTaGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: WSDIIYRLSQCS*LTKAQWKSECV Trigger: GACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR-3UTR CAA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAACTCCACTTTGTGACCTaGTATTTCTCAAAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: QTLQDYGPMTPKPSVFQELHFVT*YFSKSG Trigger: TCCAGACTTTGAGAAATACAAGGTCACAAAGTGGAG...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 72 bp | GGCATTAGTGGAGCTGCCAGCTTGAATTTTGTCTGTTaGCACAATGTTACAGTGCTGACGTCAATTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: GISGAASLNFVC*HNVTVLTSITQ Trigger: CTGGGTAATTGACGTCAGCACTGTAACATTGTGTCAACAGACAAAATTCAAGCTGGCAGCTCCACTAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 72 bp | CCAGTGCTCCTGGTTAACAAAGGCACAATGGAAGTCTaGGTGTGTCTCAGTTACTTACGTTGTCTTAGACCT | + |
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Preference number: 3 (lower is better) Translates to: PVLLVNKGTMEV*VCLSYLRCLRP Trigger: AGGTCTAAGACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR GCA 72 bp | TTTGCATGGTCAGATATCATTTACAGGCTCAGCCAGTaGTCCTGGTTAACAAAGGCACAATGGAAGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FAWSDIIYRLSQ*SWLTKAQWKSE Trigger: CTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 72 bp | CTGTTTATCTATGGCTTGTCAAACCCTTCAAGACTATaGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LFIYGLSNPSRL*THDPKAQCFSG Trigger: TCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTGACAAGCCATAGATAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 72 bp | AAACAACTCAAACTTAAGGATGGTGGCTCCACTTTGTaGCCTTGTATTTCTCAAAGTCTGGAGGGTCAGATC | + |
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Preference number: 3 (lower is better) Translates to: KQLKLKDGGSTL*PCISQSLEGQI Trigger: GATCTGACCCTCCAGACTTTGAGAAATACAAGGTCACAAAGTGGAGCCACCATCCTTAAGTTTGAGTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR GCA 72 bp | CCTGTTACCATAAGACACAAGTCACCATCATCCCATTaGTATAGTCCACTTGAACTAATGACAACTCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PVTIRHKSPSSH*YSPLELMTTLR Trigger: CCTTAGAGTTGTCATTAGTTCAAGTGGACTATAGCAATGGGATGATGGTGACTTGTGTCTTATGGTAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CCA 72 bp | TTTATTCACAACCCATTAGAGGACAGCAGGACTTCCTaGGTACCTCTGCAACAAGACTTAAAATTTATAGAG | + |
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Preference number: 3 (lower is better) Translates to: FIHNPLEDSRTS*VPLQQDLKFIE Trigger: CTCTATAAATTTTAAGTCTTGTTGCAGAGGTACCCAGGAAGTCCTGCTGTCCTCTAATGGGTTGTGAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 72 bp | CTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTaGATCACCACATATGATTTTTGTCTTCACCATTTT | + |
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Preference number: 3 (lower is better) Translates to: LDVLSNVLGNAD*ITTYDFCLHHF Trigger: AAAATGGTGAAGACAAAAATCATATGTGGTGATTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR TCA 72 bp | AATAAACTGGTAGTGACAGGATATGATGGAGAGATTTaGCATCCTGGCAAATCACTGTCATTGATTCAATTA | + |
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Preference number: 3 (lower is better) Translates to: NKLVVTGYDGEI*HPGKSLSLIQL Trigger: TAATTGAATCAATGACAGTGATTTGCCAGGATGTCAAATCTCTCCATCATATCCTGTCACTACCAGTTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR CCA 90 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAACCTCCACCTAAGAGCTaGTCCAGGGCTGGGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: WSDIIYRLSQCSWLTKAQPPPKS*SRAGSP Trigger: CGGGCTCCCAGCCCTGGACCAGCTCTTAGGTGGAGG...TTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCCATGGAGCTACAGCCTaGACCCAGCCGCGCGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: WLTKAQWKSECVSVTYVVHGATA*TQPRGG Trigger: TCCACCGCGCGGCTGGGTGCAGGCTGTAGCTCCATG...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAAGGCTGGGAGCCCGGTTaGCACCAGCAGTTGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LPIKSWMYCLMCWVMQTEGWEPG*HQQLSI Trigger: AATGGACAACTGCTGGTGTCAACCGGGCTCCCAGCC...TTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | GTTACCATAAGACACAAGTCACCATCATCCCATTGCTATAGTCCACTTGAACTAGCACCGACGGTCGCGTaGCAGCAATGGACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VTIRHKSPSSHCYSPLELAPTVA*QQWTAA Trigger: GGCTGCTGTCCATTGCTGGCACGCGACCGTCGGTGC...TAGTTCAAGTGGACTATAGCAATGGGATGATGGTGACTTGTGTCTTATGGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR CCA 90 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAATCTTGCCTTCGGCCATaGAGCTACAGCCTGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: WSDIIYRLSQCSWLTKAQSCLRP*SYSLHP Trigger: TGGGTGCAGGCTGTAGCTCCATGGCCGAAGGCAAGA...TTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAAACGGCCCACTGTGTCTaGCAAGTCTGGAGGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: WSDIIYRLSQCSWLTKAQTAHCV*QVWRQM Trigger: CATTTGCCTCCAGACTTGTCAGACACAGTGGGCCGT...TTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCAGTCCAGGTGCTTCTTaGCTTCGGCCATGGAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: WLTKAQWKSECVSVTYVVSPGAS*LRPWSY Trigger: GTAGCTCCATGGCCGAAGGCAAGAAGCACCTGGACT...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAAAAGTCTGGAGGCAAATaGAGTCGCTCAATGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: WSDIIYRLSQCSWLTKAQKSGGK*SRSMVN Trigger: GTTCACCATTGAGCGACTGCATTTGCCTCCAGACTT...TTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR CCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAAGTTGACATTAGGCTCTaGGGTTTTAGCACTGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEVDIRL*GFSTVY Trigger: GTACACAGTGCTAAAACCCCAGAGCCTAATGTCAAC...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR CCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAATGGAGAGATGTGTTCTaGAAGGAAGAATCCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEWRDVF*KEESMP Trigger: TGGCATGGATTCTTCCTTCCAGAACACATCTCTCCA...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGCTGGACAAGATGTGCTaGCATCGTGATGATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMLDKMC*HRDDAG Trigger: GCCTGCATCATCACGATGCCAGCACATCTTGTCCAG...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| 3UTR CAA 72 bp | GAAAACCTGCTCCATATGCTGTGTCCCCGAGACATTTaGCATGGTCAGATATCATTTACAGGCTCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ENLLHMLCPRDI*HGQISFTGSAS Trigger: ACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAAATGTCTCGGGGACACAGCATATGGAGCAGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAAATTTTCTTTGGCAGATaGAACCAACAGAGTATGCCC | + |
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Preference number: 4 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEIFFGR*NQQSMP Trigger: GGGCATACTCTGTTGGTTGCATCTGCCAAAGAAAAT...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR GCA 90 bp | GTTACCATAAGACACAAGTCACCATCATCCCATTGCTATAGTCCACTTGAACTACTGCCAGATCCTGTTTaGTTGAACGGCCCACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VTIRHKSPSSHCYSPLELLPDPV*LNGPLC Trigger: ACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAG...TAGTTCAAGTGGACTATAGCAATGGGATGATGGTGACTTGTGTCTTATGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
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| CDS-3UTR TCA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAAGGTGAGCCAAGGTTCTaGATTCCTATTCTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEGEPRF*IPILKM Trigger: CATTTTAAGAATAGGAATTCAGAACCTTGGCTCACC...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGCAGTCGCTCAATGGTaGACAGCTTCCTTTTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: CSWLTKAQWKSECVSVTYAVAQW*TASFLT Trigger: AGTTAAAAAGGAAGCTGTTCACCATTGAGCGACTGC...GTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCAGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAAGGATGGTGGCTCCACTTTGTGACCTTGTATTTCTCAAAGTCTGGAGGATTCTGGACAAGATGTaGTGGCATCGTGATGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLRMVAPLCDLVFLKVWRILDKM*WHRDDA Trigger: TGCATCATCACGATGCCAGCACATCTTGTCCAGAAT...CCTCCAGACTTTGAGAAATACAAGGTCACAAAGTGGAGCCACCATCCTTAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CCA 90 bp | AACTTAAGGATGGTGGCTCCACTTTGTGACCTTGTATTTCTCAAAGTCTGGAGGTGGCAGGATTTTCTTTaGCAGATGCAACCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRMVAPLCDLVFLKVWRWQDFL*QMQPTE Trigger: CTCTGTTGGTTGCATCTGCCAAAGAAAATCCTGCCA...CCTCCAGACTTTGAGAAATACAAGGTCACAAAGTGGAGCCACCATCCTTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR TCA 90 bp | AACTTAAGGATGGTGGCTCCACTTTGTGACCTTGTATTTCTCAAAGTCTGGAGGGTTAGTCTCTCTCTCTaGACCAATAAAGGATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRMVAPLCDLVFLKVWRVSLSL*TNKGFQ Trigger: CTGGAATCCTTTATTGGTTCAGAGAGAGAGACTAAC...CCTCCAGACTTTGAGAAATACAAGGTCACAAAGTGGAGCCACCATCCTTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAAAGGCACAATTCTCCTTTAAGATCTaGAGAGATGTGTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSDIIYRLSQCSWLTKAQFSFKI*RDVFWK Trigger: CTTCCAGAACACATCTCTCCAGATCTTAAAGGAGAA...TTGTGCCTTTGTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCGGAAGGAAGAATCCATaGCACTTTGAACTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLTKAQWKSECVSVTYVVGRKNP*HFELCS Trigger: ACTACAGAGTTCAAAGTGGCATGGATTCTTCCTTCC...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCGCAACCAACAGAGTATaGCCATTGATGATTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLTKAQWKSECVSVTYVVATNRV*PLMIPS Trigger: AGAAGGAATCATCAATGGGCATACTCTGTTGGTTGC...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGAACTTGGTAAGCCTGTaGTTGTTGTCACAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMNLVSL*LLSQFS Trigger: AGAAAACTGTGACAACAATCACAGGCTTACCAAGTT...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAAATTGATGATTCCTTCTaGCATGAAATACTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPIKSWMYCLMCWVMQTEIDDSF*HEILEE Trigger: CTCTTCAAGTATTTCATGGCAGAAGGAATCATCAAT...TTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 90 bp | TCTTGCCTTCGGCCATGGAGCTACAGCCTGCACCCAGCCGCGCGGTaGATGCTGCCAGATCCTGTTTGCTTGAACGGCCCACTGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCLRPWSYSLHPAAR*MLPDPVCLNGPLCL Trigger: CAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTGCAGGCTGTAGCTCCATGGCCGAAGGCAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS GCA 90 bp | TACAGCCTGCACCCAGCCGCGCGGTGGATGCTGCCAGATCCTGTTTaGTTGAACGGCCCACTGTGTCTGACAAGTCTGGAGGCAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSLHPAARWMLPDPV*LNGPLCLTSLEANA Trigger: TGCATTTGCCTCCAGACTTGTCAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTGCAGGCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 90 bp | TCAATCAGAAGAAGTGTTCCAACAGCTAACCCTCCACCTAAGAGCTaGTCCAGGGCTGGGAGCCCGGTTGACACCAGCAGTTGTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SIRRSVPTANPPPKS*SRAGSPVDTSSCPF Trigger: GAATGGACAACTGCTGGTGTCAACCGGGCTCCCAGCCCTGGACCAGCTCTTAGGTGGAGGGTTAGCTGTTGGAACACTTCTTCTGATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCCTTCAAGACTATGGACCCATGACCCCAAAGCCCAGTGTTTTTCAGGAAGGGCTGGGAGCCCGGTaGACACCAGCAGTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTLQDYGPMTPKPSVFQEGLGAR*TPAVVH Trigger: ATGGACAACTGCTGGTGTCAACCGGGCTCCCAGCCC...TTCCTGAAAAACACTGGGCTTTGGGGTCATGGGTCCATAGTCTTGAAGGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 90 bp | AATCGTGACGACGAGACCGGTCCCACCTCCATCTTGGGTTGTAACTaGTACCGCCAGGCTATCTTCATGTTGACATTAGGCTCTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NRDDETGPTSILGCN*YRQAIFMLTLGSGV Trigger: AACCCCAGAGCCTAATGTCAACATGAAGATAGCCTGGCGGTACCAGTTACAACCCAAGATGGAGGTGGGACCGGTCTCGTCGTCACGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTAACAAAGGCACAATGGAAGTCTGAGTGTGTCTCAGTTACTTACGTTGTCGGGCCCCCAGAGGCCTaGCCCTTCCTCTGGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: WLTKAQWKSECVSVTYVVGPPEA*PFLWKL Trigger: TAGTTTCCAGAGGAAGGGCAAGGCCTCTGGGGGCCC...GACAACGTAAGTAACTGAGACACACTCAGACTTCCATTGTGCCTTTGTTAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAACCAGATCCTGTTTGCTaGAACGGCCCACTGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPIKSWMYCLMCWVMQTEPDPVC*NGPLCL Trigger: CAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGG...TTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCATCAAGTCCTGGATGTATTGTCTAATGTGCTGGGTAATGCAGACTGAAAAGTCCAGGTGCTTCTaGCCTTCGGCCATGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPIKSWMYCLMCWVMQTEKSRCF*PSAMEL Trigger: TAGCTCCATGGCCGAAGGCAAGAAGCACCTGGACTT...TTCAGTCTGCATTACCCAGCACATTAGACAATACATCCAGGACTTGATGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | GTTACCATAAGACACAAGTCACCATCATCCCATTGCTATAGTCCACTTGAACTAGGTCCCACCTCCATCTaGGGTTGTAACTGGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VTIRHKSPSSHCYSPLELGPTSI*GCNWYR Trigger: GCGGTACCAGTTACAACCCAAGATGGAGGTGGGACC...TAGTTCAAGTGGACTATAGCAATGGGATGATGGTGACTTGTGTCTTATGGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTTGCATGGTCAGATATCATTTACAGGCTCAGCCAGTGCTCCTGGTTAACAGAATCCATGCCACTTaGAACTCTGTAGTAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TFCMVRYHLQAQPVLLVNRIHAT*NSVVAP Trigger: GGGAGCTACTACAGAGTTCAAAGTGGCATGGATTCT...GTTAACCAGGAGCACTGGCTGAGCCTGTAAATGATATCTGACCATGCAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTTCTTAAACACACACAAGTGGCTTTCTGGCTTCCACTGTTTATCTATGCAGGCTATCTTCATGTaGACATTAGGCTCTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEFLNTHKWLSGFHCLSMQAIFM*TLGSGV Trigger: AACCCCAGAGCCTAATGTCAACATGAAGATAGCCTG...CATAGATAAACAGTGGAAGCCAGAAAGCCACTTGTGTGTGTTTAAGAACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 90 bp | ACTGTATCTGACAAATTTCTCACACGAGTAGTAATTGATTTATTCTaGACAAGATGTGCTGGCATCGTGATGATGCAGGCGGACAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSDKFLTRVVIDLF*TRCAGIVMMQADSE Trigger: CTCACTGTCCGCCTGCATCATCACGATGCCAGCACATCTTGTCCAGAATAAATCAATTACTACTCGTGTGAGAAATTTGTCAGATACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS GCA 90 bp | TCTCCTTTAAGATCTGGAGAGATGTGTTCTGGAAGGAAGAATCCATaGCACTTTGAACTCTGTAGTAGCTCCCAAGGAATCCTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPLRSGEMCSGRKNP*HFELCSSSQGILFD Trigger: ATCAAAAAGGATTCCTTGGGAGCTACTACAGAGTTCAAAGTGGCATGGATTCTTCCTTCCAGAACACATCTCTCCAGATCTTAAAGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS-3UTR CAA 90 bp | GTTACCATAAGACACAAGTCACCATCATCCCATTGCTATAGTCCACTTGAACTAAACAGAGTATGCCCATaGATGATTCCTTCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VTIRHKSPSSHCYSPLELNRVCP*MIPSAM Trigger: CATGGCAGAAGGAATCATCAATGGGCATACTCTGTT...TAGTTCAAGTGGACTATAGCAATGGGATGATGGTGACTTGTGTCTTATGGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS TCA 72 bp | GCCTTGCCCTTCCTCTGGAAACTAGAGGTGCCGCCCTaGCCCGCCTCGGACGCCACAGACCGGGAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPFLWKLEVPP*PASDATDRELR Trigger: CCTCAGCTCCCGGTCTGTGGCGTCCGAGGCGGGTCAGGGCGGCACCTCTAGTTTCCAGAGGAAGGGCAAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS GCA 72 bp | ACACCAGCAGTTGTCCATTCCGCACCGACGGTCGCGTaGCAGCAATGGACAGCAGCCGAGGGCCCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TPAVVHSAPTVA*QQWTAAEGPLR Trigger: CCGGAGGGGGCCCTCGGCTGCTGTCCATTGCTGGCACGCGACCGTCGGTGCGGAATGGACAACTGCTGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 72 bp | CGGCCATGGAGCTACAGCCTGCACCCAGCCGCGCGGTaGATGCTGCCAGATCCTGTTTGCTTGAACGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPWSYSLHPAAR*MLPDPVCLNGP Trigger: TGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTGCAGGCTGTAGCTCCATGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | CAGCTAACCCTCCACCTAAGAGCTGGTCCAGGGCTGGGAGCCCGGTaGACACCAGCAGTTGTCCATTCCGCACCGACGGTCGCGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLTLHLRAGPGLGAR*TPAVVHSAPTVACQ Trigger: CTGGCACGCGACCGTCGGTGCGGAATGGACAACTGCTGGTGTCAACCGGGCTCCCAGCCCTGGACCAGCTCTTAGGTGGAGGGTTAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 72 bp | CTCCACCTAAGAGCTGGTCCAGGGCTGGGAGCCCGGTaGACACCAGCAGTTGTCCATTCCGCACCGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLRAGPGLGAR*TPAVVHSAPTV Trigger: GACCGTCGGTGCGGAATGGACAACTGCTGGTGTCAACCGGGCTCCCAGCCCTGGACCAGCTCTTAGGTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS GCA 72 bp | CACCCAGCCGCGCGGTGGATGCTGCCAGATCCTGTTTaGTTGAACGGCCCACTGTGTCTGACAAGTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HPAARWMLPDPV*LNGPLCLTSLE Trigger: CTCCAGACTTGTCAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | AGCCTGCACCCAGCCGCGCGGTGGATGCTGCCAGATCCTGTTTGCTaGAACGGCCCACTGTGTCTGACAAGTCTGGAGGCAAATGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLHPAARWMLPDPVC*NGPLCLTSLEANAV Trigger: GACTGCATTTGCCTCCAGACTTGTCAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTGCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | CTACAGCCTGCACCCAGCCGCGCGGTGGATGCTGCCAGATCCTGTTaGCTTGAACGGCCCACTGTGTCTGACAAGTCTGGAGGCAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LQPAPSRAVDAARSC*LERPTVSDKSGGKC Trigger: GCATTTGCCTCCAGACTTGTCAGACACAGTGGGCCGTTCAAGCAAACAGGATCTGGCAGCATCCACCGCGCGGCTGGGTGCAGGCTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 72 bp | AGAAGTGTTCCAACAGCTAACCCTCCACCTAAGAGCTaGTCCAGGGCTGGGAGCCCGGTTGACACCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSVPTANPPPKS*SRAGSPVDTSS Trigger: ACTGCTGGTGTCAACCGGGCTCCCAGCCCTGGACCAGCTCTTAGGTGGAGGGTTAGCTGTTGGAACACTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 72 bp | CCAAATCGTGACGACGAGACCGGTCCCACCTCCATCTaGGGTTGTAACTGGTACCGCCAGGCTATCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PNRDDETGPTSI*GCNWYRQAIFM Trigger: CATGAAGATAGCCTGGCGGTACCAGTTACAACCCAAGATGGAGGTGGGACCGGTCTCGTCGTCACGATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CCA 72 bp | GACGAGACCGGTCCCACCTCCATCTTGGGTTGTAACTaGTACCGCCAGGCTATCTTCATGTTGACATTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DETGPTSILGCN*YRQAIFMLTLG Trigger: GCCTAATGTCAACATGAAGATAGCCTGGCGGTACCAGTTACAACCCAAGATGGAGGTGGGACCGGTCTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | ACCTCCATCTTGGGTTGTAACTGGTACCGCCAGGCTATCTTCATGTaGACATTAGGCTCTGGGGTTTTAGCACTGTGTACATCTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSILGCNWYRQAIFM*TLGSGVLALCTSSS Trigger: GCTTGAAGATGTACACAGTGCTAAAACCCCAGAGCCTAATGTCAACATGAAGATAGCCTGGCGGTACCAGTTACAACCCAAGATGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CAA 72 bp | TTGGGTTGTAACTGGTACCGCCAGGCTATCTTCATGTaGACATTAGGCTCTGGGGTTTTAGCACTGTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LGCNWYRQAIFM*TLGSGVLALCT Trigger: TGTACACAGTGCTAAAACCCCAGAGCCTAATGTCAACATGAAGATAGCCTGGCGGTACCAGTTACAACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS GCA 72 bp | AGATCTGGAGAGATGTGTTCTGGAAGGAAGAATCCATaGCACTTTGAACTCTGTAGTAGCTCCCAAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RSGEMCSGRKNP*HFELCSSSQGI Trigger: GATTCCTTGGGAGCTACTACAGAGTTCAAAGTGGCATGGATTCTTCCTTCCAGAACACATCTCTCCAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS TCA 72 bp | CTCCATCAAATCCTTCAGCATAAACGCTCTTCTGAATaGACTCAAGCAGCCTCATGTAGCCACAGGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LHQILQHKRSSE*TQAASCSHRTK Trigger: TTTTGTCCTGTGGCTACATGAGGCTGCTTGAGTTCATTCAGAAGAGCGTTTATGCTGAAGGATTTGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | ATCCATGCCACTTTGAACTCTGTAGTAGCTCCCAAGGAATCCTTTTaGATAAATCATAATAGTGACCAAATCGTGACGACGAGACCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IHATLNSVVAPKESF*INHNSDQIVTTRPV Trigger: GACCGGTCTCGTCGTCACGATTTGGTCACTATTATGATTTATCAAAAAGGATTCCTTGGGAGCTACTACAGAGTTCAAAGTGGCATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS GCA 72 bp | GCAGGATTTTCTTTGGCAGATGCAACCAACAGAGTATaGCCATTGATGATTCCTTCTGCCATGAAATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGFSLADATNRV*PLMIPSAMKYL Trigger: CAAGTATTTCATGGCAGAAGGAATCATCAATGGGCATACTCTGTTGGTTGCATCTGCCAAAGAAAATCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CCA 72 bp | GACAAATTTCTCACACGAGTAGTAATTGATTTATTCTaGACAAGATGTGCTGGCATCGTGATGATGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DKFLTRVVIDLF*TRCAGIVMMQA Trigger: CGCCTGCATCATCACGATGCCAGCACATCTTGTCCAGAATAAATCAATTACTACTCGTGTGAGAAATTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | TTGGCAGGATTTTCTTTGGCAGATGCAACCAACAGAGTATGCCCATaGATGATTCCTTCTGCCATGAAATACTTGAAGAGCAAAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAGFSLADATNRVCP*MIPSAMKYLKSKGE Trigger: TTCACCTTTGCTCTTCAAGTATTTCATGGCAGAAGGAATCATCAATGGGCATACTCTGTTGGTTGCATCTGCCAAAGAAAATCCTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 72 bp | TTTTCTTTGGCAGATGCAACCAACAGAGTATGCCCATaGATGATTCCTTCTGCCATGAAATACTTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSLADATNRVCP*MIPSAMKYLKS Trigger: GCTCTTCAAGTATTTCATGGCAGAAGGAATCATCAATGGGCATACTCTGTTGGTTGCATCTGCCAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | CGCTCAATGGTGAACAGCTTCCTTTTTAACTTAAAAGCTAAGTCTTaGACATCCGATTCATCACAAGTCAAGTTATTAAGCCGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RSMVNSFLFNLKAKS*TSDSSQVKLLSRGI Trigger: GATTCCTCGGCTTAATAACTTGACTTGTGATGAATCGGATGTCAAAGACTTAGCTTTTAAGTTAAAAAGGAAGCTGTTCACCATTGAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122965.8 |
||
| CDS CAA 72 bp | ACTTTGAACTCTGTAGTAGCTCCCAAGGAATCCTTTTaGATAAATCATAATAGTGACCAAATCGTGACGACG | + |
|
Preference number: 6 (lower is better) Translates to: TLNSVVAPKESF*INHNSDQIVTT Trigger: CGTCGTCACGATTTGGTCACTATTATGATTTATCAAAAAGGATTCCTTGGGAGCTACTACAGAGTTCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028588.4 ENSMUST00000122965.8 |
||
| CDS CAA 90 bp | GACTCAATGGTGAACAGCTTCCTTTTTAACTTAAAAGCTAAGTCTTaGACATCCGATTCATCACAAGTCAAGTTATTAAGCCGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: DSMVNSFLFNLKAKS*TSDSSQVKLLSRGI Trigger: GATTCCTCGGCTTAATAACTTGACTTGTGATGAATCGGATGTCAAAGACTTAGCTTTTAAGTTAAAAAGGAAGCTGTTCACCATTGAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028588.4 |
||