RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELOC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079658

Ensembl transcript IDs: ENSMUST00000188641.7

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGGCAACCATATCTCACCATCTCATTCACTTCAGTGCTCTCCATaGCAAGGCAGAGATCTGGCCAGATTCAGATGTTCTGTGTGCTCG +
Preference number: 1 (lower is better)
Translates to: GGNHISPSHSLQCSP*QGRDLARFRCSVCS
Trigger: CGAGCACACAGAACATCTGAATCTGGCCAGATCTCTGCCTTGGCATGGAGAGCACTGAAGTGAATGAGATGGTGAGATATGGTTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 90 bp ACTTCTGTAGCTTTGAAGGCTTGCAGACAGACCTGGGACAGCCACTaGGGGCAACCATATCTCACCATCTCATTCACTTCAGTGCTCTCC +
Preference number: 1 (lower is better)
Translates to: TSVALKACRQTWDSH*GQPYLTISFTSVLS
Trigger: GGAGAGCACTGAAGTGAATGAGATGGTGAGATATGGTTGCCCCCAGTGGCTGTCCCAGGTCTGTCTGCAAGCCTTCAAAGCTACAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR GCA 90 bp ACAGCCACTGGGGGCAACCATATCTCACCATCTCATTCACTTCAGTaGTCTCCATGCCAAGGCAGAGATCTGGCCAGATTCAGATGTTCT +
Preference number: 1 (lower is better)
Translates to: TATGGNHISPSHSLQ*SPCQGRDLARFRCS
Trigger: AGAACATCTGAATCTGGCCAGATCTCTGCCTTGGCATGGAGAGCACTGAAGTGAATGAGATGGTGAGATATGGTTGCCCCCAGTGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR TCA 90 bp GGTTGGCTAGAAGATATGCTGGGAGGTATCTTCTGGTGCTATGTCTaGGAGCACTACAGGGCTCTGACCACATCCTTCCACTACTATTTT +
Preference number: 1 (lower is better)
Translates to: GWLEDMLGGIFWCYV*EHYRALTTSFHYYF
Trigger: AAAATAGTAGTGGAAGGATGTGGTCAGAGCCCTGTAGTGCTCTCAGACATAGCACCAGAAGATACCTCCCAGCATATCTTCTAGCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 90 bp GAAGTTAAGGTTATTTTTGGATCTAACAGAGTAACCTACAAAAACTaGCTCAAGCTAACTTTCCTTGCTAGCTATTGCCTTTGGACCTTT +
Preference number: 1 (lower is better)
Translates to: EVKVIFGSNRVTYKN*LKLTFLASYCLWTF
Trigger: AAAGGTCCAAAGGCAATAGCTAGCAAGGAAAGTTAGCTTGAGCCAGTTTTTGTAGGTTACTCTGTTAGATCCAAAAATAACCTTAACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 90 bp CCTGAAACACAATTCCTGTACACTCATCACAATTGCACTAAGCTATaGCCAGCATGTCTTGAAACATTACTAAAAATAACCAATTTACAC +
Preference number: 1 (lower is better)
Translates to: PETQFLYTHHNCTKL*PACLETLLKITNLH
Trigger: GTGTAAATTGGTTATTTTTAGTAATGTTTCAAGACATGCTGGCCATAGCTTAGTGCAATTGTGATGAGTGTACAGGAATTGTGTTTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CAA 90 bp CCAGAGGGCCTTGTCATAGTGGCACTACCACTGAGCTCCAAATACTaGCAGCCTGAAACACAATTCCTGTACACTCATCACAATTGCACT +
Preference number: 2 (lower is better)
Translates to: PEGLVIVALPLSSKY*QPETQFLYTHHNCT
Trigger: AGTGCAATTGTGATGAGTGTACAGGAATTGTGTTTCAGGCTGCAAGTATTTGGAGCTCAGTGGTAGTGCCACTATGACAAGGCCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR-3UTR TCA 90 bp TACTTGCAGCCTGAAACACAATTCCTGTACACTCATCACAATTGCACTAAGCTAACTCTGCTATGCAAATaGCAGAAGGAATCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: YLQPETQFLYTHHNCTKLTLLCK*QKESAR
Trigger: CCGAGCAGATTCCTTCTGTCATTTGCATAGCAGAGT...TAGCTTAGTGCAATTGTGATGAGTGTACAGGAATTGTGTTTCAGGCTGCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR-3UTR CCA 90 bp TTAAGAGGAAAAGTTATGACTTCTGTAGCTTTGAAGGCTTGCAGACAGACCTGGTCATGGCTTTTAGCGTaGTTGGCTAGAAGATATGCT +
Preference number: 2 (lower is better)
Translates to: LRGKVMTSVALKACRQTWSWLLA*LARRYA
Trigger: AGCATATCTTCTAGCCAACCACGCTAAAAGCCATGA...CCAGGTCTGTCTGCAAGCCTTCAAAGCTACAGAAGTCATAACTTTTCCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR-3UTR TCA 90 bp ACAATGCACCATTTTCTGTACCATATACAAATTTGCCTAGTGTGCTGCAATTTTCAAATACTTGCAGCCTaGAACACAATTCCTGTACAC +
Preference number: 2 (lower is better)
Translates to: TMHHFLYHIQICLVCCNFQILAA*NTIPVH
Trigger: GTGTACAGGAATTGTGTTTCAGGCTGCAAGTATTTG...AAAATTGCAGCACACTAGGCAAATTTGTATATGGTACAGAAAATGGTGCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR-3UTR GCA 90 bp GTTAAGGTTATTTTTGGATCTAACAGAGTAACCTACAAAAACTGGCTCAAGCTAATGACAGAAGGAATCTaGTCGGCAATTAGCTTTACA +
Preference number: 2 (lower is better)
Translates to: VKVIFGSNRVTYKNWLKLMTEGI*SAISFT
Trigger: TGTAAAGCTAATTGCCGAGCAGATTCCTTCTGTCAT...TAGCTTGAGCCAGTTTTTGTAGGTTACTCTGTTAGATCCAAAAATAACCTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR GCA 72 bp GGGGGCAACCATATCTCACCATCTCATTCACTTCAGTaGTCTCCATGCCAAGGCAGAGATCTGGCCAGATTC +
Preference number: 3 (lower is better)
Translates to: GGNHISPSHSLQ*SPCQGRDLARF
Trigger: GAATCTGGCCAGATCTCTGCCTTGGCATGGAGAGCACTGAAGTGAATGAGATGGTGAGATATGGTTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp GCTTTGAAGGCTTGCAGACAGACCTGGGACAGCCACTaGGGGCAACCATATCTCACCATCTCATTCACTTCA +
Preference number: 3 (lower is better)
Translates to: ALKACRQTWDSH*GQPYLTISFTS
Trigger: TGAAGTGAATGAGATGGTGAGATATGGTTGCCCCCAGTGGCTGTCCCAGGTCTGTCTGCAAGCCTTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR TCA 72 bp GAAGATATGCTGGGAGGTATCTTCTGGTGCTATGTCTaGGAGCACTACAGGGCTCTGACCACATCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: EDMLGGIFWCYV*EHYRALTTSFH
Trigger: GTGGAAGGATGTGGTCAGAGCCCTGTAGTGCTCTCAGACATAGCACCAGAAGATACCTCCCAGCATATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR GCA 72 bp AGAGGAAAAGTTATGACTTCTGTAGCTTTGAAGGCTTaGAGACAGACCTGGGACAGCCACTGGGGGCAACCA +
Preference number: 3 (lower is better)
Translates to: RGKVMTSVALKA*RQTWDSHWGQP
Trigger: TGGTTGCCCCCAGTGGCTGTCCCAGGTCTGTCTGCAAGCCTTCAAAGCTACAGAAGTCATAACTTTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp ATTCACTTCAGTGCTCTCCATGCCAAGGCAGAGATCTaGCCAGATTCAGATGTTCTGTGTGCTCGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: IHFSALHAKAEI*PDSDVLCARLK
Trigger: TTTAAGCCGAGCACACAGAACATCTGAATCTGGCCAGATCTCTGCCTTGGCATGGAGAGCACTGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR-3UTR CAA 90 bp TTAAGAGGAAAAGTTATGACTTCTGTAGCTTTGAAGGCTTGCAGACAGACCTGGTGGCTTTTAGCGTGGTaGGCTAGAAGATATGCTGGG +
Preference number: 3 (lower is better)
Translates to: LRGKVMTSVALKACRQTWWLLAW*ARRYAG
Trigger: CCCAGCATATCTTCTAGCCAACCACGCTAAAAGCCA...CCAGGTCTGTCTGCAAGCCTTCAAAGCTACAGAAGTCATAACTTTTCCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR TCA 72 bp AGTGGCACTACCACTGAGCTCCAAATACTTGCAGCCTaGAACACAATTCCTGTACACTCATCACAATTGCAC +
Preference number: 3 (lower is better)
Translates to: SGTTTELQILAA*NTIPVHSSQLH
Trigger: GTGCAATTGTGATGAGTGTACAGGAATTGTGTTTCAGGCTGCAAGTATTTGGAGCTCAGTGGTAGTGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp ATGAGTGTGACTTCAGAAGACTCATGGCTTTTAGCGTaGTTGGCTAGAAGATATGCTGGGAGGTATCTTCTG +
Preference number: 3 (lower is better)
Translates to: MSVTSEDSWLLA*LARRYAGRYLL
Trigger: CAGAAGATACCTCCCAGCATATCTTCTAGCCAACCACGCTAAAAGCCATGAGTCTTCTGAAGTCACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp CTGAATTACCTCATGAGTGTGACTTCAGAAGACTCATaGCTTTTAGCGTGGTTGGCTAGAAGATATGCTGGG +
Preference number: 3 (lower is better)
Translates to: LNYLMSVTSEDS*LLAWLARRYAG
Trigger: CCCAGCATATCTTCTAGCCAACCACGCTAAAAGCCATGAGTCTTCTGAAGTCACACTCATGAGGTAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR TCA 72 bp TCTTCTGGTGCTATGTCTGAGAGCACTACAGGGCTCTaGCCACATCCTTCCACTACTATTTTTATAGCATTC +
Preference number: 3 (lower is better)
Translates to: SSGAMSESTTGL*PHPSTTIFIAF
Trigger: GAATGCTATAAAAATAGTAGTGGAAGGATGTGGTCAGAGCCCTGTAGTGCTCTCAGACATAGCACCAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR GCA 72 bp AAAAACTGGCTCAAGCTAACTTTCCTTGCTAGCTATTaGCTTTGGACCTTTGGAGCTTGTAGAAAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: KNWLKLTFLASY*LWTFGACRKGK
Trigger: TTTGCCCTTTCTACAAGCTCCAAAGGTCCAAAGGCAATAGCTAGCAAGGAAAGTTAGCTTGAGCCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp TGGCTCAAGCTAACTTTCCTTGCTAGCTATTGCCTTTaGACCTTTGGAGCTTGTAGAAAGGGCAAATATAAG +
Preference number: 3 (lower is better)
Translates to: WLKLTFLASYCL*TFGACRKGKYK
Trigger: CTTATATTTGCCCTTTCTACAAGCTCCAAAGGTCCAAAGGCAATAGCTAGCAAGGAAAGTTAGCTTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR TCA 72 bp TCAGCACATCTAGACTCAAAGTTTAGATCAAGCTCATaGAGTGTTGTAGACACATTTCAACACCATAAGTGC +
Preference number: 3 (lower is better)
Translates to: SAHLDSKFRSSS*SVVDTFQHHKC
Trigger: GCACTTATGGTGTTGAAATGTGTCTACAACACTTCATGAGCTTGATCTAAACTTTGAGTCTAGATGTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp CAATTCCTGTACACTCATCACAATTGCACTAAGCTATaGCCAGCATGTCTTGAAACATTACTAAAAATAACC +
Preference number: 3 (lower is better)
Translates to: QFLYTHHNCTKL*PACLETLLKIT
Trigger: GGTTATTTTTAGTAATGTTTCAAGACATGCTGGCCATAGCTTAGTGCAATTGTGATGAGTGTACAGGAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CCA 72 bp GTTATTTTTGGATCTAACAGAGTAACCTACAAAAACTaGCTCAAGCTAACTTTCCTTGCTAGCTATTGCCTT +
Preference number: 3 (lower is better)
Translates to: VIFGSNRVTYKN*LKLTFLASYCL
Trigger: AAGGCAATAGCTAGCAAGGAAAGTTAGCTTGAGCCAGTTTTTGTAGGTTACTCTGTTAGATCCAAAAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR GCA 72 bp AACACAATGCACCATTTTCTGTACCATATACAAATTTaGCTAGTGTGCTGCAATTTTCATGTCCTGAAGTTA +
Preference number: 3 (lower is better)
Translates to: NTMHHFLYHIQI*LVCCNFHVLKL
Trigger: TAACTTCAGGACATGAAAATTGCAGCACACTAGGCAAATTTGTATATGGTACAGAAAATGGTGCATTGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7
3UTR CAA 72 bp CTTGTCATAGTGGCACTACCACTGAGCTCCAAATACTaGCAGCCTGAAACACAATTCCTGTACACTCATCAC +
Preference number: 4 (lower is better)
Translates to: LVIVALPLSSKY*QPETQFLYTHH
Trigger: GTGATGAGTGTACAGGAATTGTGTTTCAGGCTGCAAGTATTTGGAGCTCAGTGGTAGTGCCACTATGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188641.7