Pregenerated sensors for ELOA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028668Ensembl transcript IDs: ENSMUST00000030427.6
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTGGTGCTCACTCCTGCTCCTCCTGCCTCCAAAACAGAGAAAGTaGGCCCCTGAGAGCCCTTGGAACGCCAAGGATCGCAAAGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: GWCSLLLLLPPKQRK*APESPWNAKDRKGL Trigger: TAGCCCTTTGCGATCCTTGGCGTTCCAAGGGCTCTCAGGGGCTCACTTTCTCTGTTTTGGAGGCAGGAGGAGCAGGAGTGAGCACCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 90 bp | AACTCTGAGGGTTTAACAGGGAGGCTCGCTGGAGGACAGGCATTCTaGCACTCTCACTCCTGGCCCTGTATATGGGCTTGGAGCAACACA | + |
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Preference number: 1 (lower is better) Translates to: NSEGLTGRLAGGQAF*HSHSWPCIWAWSNT Trigger: TGTGTTGCTCCAAGCCCATATACAGGGCCAGGAGTGAGAGTGCCAGAATGCCTGTCCTCCAGCGAGCCTCCCTGTTAAACCCTCAGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | AAGTTGAACATGACTGTGTCTGCTTTGTGGCCATTGTGCATGGGGTaGGGGACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: KLNMTVSALWPLCMG*GTVETAAHWALTVL Trigger: GAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGTCCCTCACCCCATGCACAATGGCCACAAAGCAGACACAGTCATGTTCAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | CTCACTCCTGCTCCTCCTGCCTCCAAAACAGAGAAAGTGAGCCCCTaGGAGCCCTTGGAACGCCAAGGATCGCAAAGGGCTATTCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: LTPAPPASKTEKVSP*EPLERQGSQRAILY Trigger: ATACAGAATAGCCCTTTGCGATCCTTGGCGTTCCAAGGGCTCTCAGGGGCTCACTTTCTCTGTTTTGGAGGCAGGAGGAGCAGGAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 90 bp | TTATGCGACCTAGAAATAGGGAATCTTCCTCCTGAACTGGTTGGCTaGGACCAGGGTGACCATCCACCCTTCCCAAGGCCAACACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: LCDLEIGNLPPELVG*DQGDHPPFPRPTLR Trigger: TCTGAGTGTTGGCCTTGGGAAGGGTGGATGGTCACCCTGGTCCCAGCCAACCAGTTCAGGAGGAAGATTCCCTATTTCTAGGTCGCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | ACTGTCTTCAGAAATCTGAAGTGTGCTACAAGCAGGGTGCAGGGCTaGGGCACACAGTGGGACACATGGAAGTGTACAGGAGTCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TVFRNLKCATSRVQG*GTQWDTWKCTGVKR Trigger: CCTCTTGACTCCTGTACACTTCCATGTGTCCCACTGTGTGCCTCAGCCCTGCACCCTGCTTGTAGCACACTTCAGATTTCTGAAGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | TTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAAATCTaGAGTGTGCTACAAGCAGGGTGCAGGGCTGAGGCACACAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LKSSVGLRLILSSEI*SVLQAGCRAEAHSG Trigger: CCCACTGTGTGCCTCAGCCCTGCACCCTGCTTGTAGCACACTTCAGATTTCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | GGTAAACTGGGTGCCTCAGAAATCTTTGTGTGCCAAACCAGATGCTaGCATTGGGACGGGCAAATGCATGTCCTTTCTTTCCCTAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GKLGASEIFVCQTRC*HWDGQMHVLSFPRP Trigger: AGGCCTAGGGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACACAAAGATTTCTGAGGCACCCAGTTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 90 bp | GCAACCAAGAGAAACAATGTTTTACTTAGCAATACCTGTGTCCCATaGCAACAGGGACCCAGCATAGCAATGCACAGTAAGGTGGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: ATKRNNVLLSNTCVP*QQGPSIAMHSKVGL Trigger: TAGGCCCACCTTACTGTGCATTGCTATGCTGGGTCCCTGTTGCCATGGGACACAGGTATTGCTAAGTAAAACATTGTTTCTCTTGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 90 bp | CCCTTTGACCAGTGTCTACTCAGAAGAGCTGACCCAGGACAAGAATaGCTTTTGCTAGGCTCATCTAACTTTAATAAAGGACCTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PFDQCLLRRADPGQE*LLLGSSNFNKGPGK Trigger: CTTTCCAGGTCCTTTATTAAAGTTAGATGAGCCTAGCAAAAGCCATTCTTGTCCTGGGTCAGCTCTTCTGAGTAGACACTGGTCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | GTATGTAGTGTAGCACAGAAAACATTGCACGAGTCTTCACAAATGTaGCCAAAAGTTGAACATGACTGTGTCTGCTTTGTGGCCATTGTG | + |
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Preference number: 1 (lower is better) Translates to: VCSVAQKTLHESSQM*PKVEHDCVCFVAIV Trigger: CACAATGGCCACAAAGCAGACACAGTCATGTTCAACTTTTGGTCACATTTGTGAAGACTCGTGCAATGTTTTCTGTGCTACACTACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 90 bp | ATTCTGTATGTGTCATCTGTATGTAAAGGGCTAGTCCATCATGTGTaGCCTGTATGTAGTGTAGCACAGAAAACATTGCACGAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ILYVSSVCKGLVHHV*PVCSVAQKTLHESS Trigger: TGAAGACTCGTGCAATGTTTTCTGTGCTACACTACATACAGGTCACACATGATGGACTAGCCCTTTACATACAGATGACACATACAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGACAATACCGTTCCTCTaGGCACATCAGCACCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWTIPFL*AHQHLS Trigger: GGAAAGGTGCTGATGTGCCCAGAGGAACGGTATTGT...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCAGCAGTCCTATCCCTTCTGAAGGTGCCCTTTaGCCAGTGTCTACTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TVETAAHWALTVLSSPIPSEGAL*PVSTQK Trigger: CTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGA...AGGGATAGGACTGCTGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCAAACCAGATGCTGACATTGGGACGGGCAAATGCATGTCCTTTCTTTCCGTGCTACAAGCAGGGTaGAGGGCTGAGGCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: CAKPDADIGTGKCMSFLSVLQAG*RAEAHS Trigger: ACTGTGTGCCTCAGCCCTGCACCCTGCTTGTAGCAC...GGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGTCCTGGCCCTGTATATaGGCTTGGAGCAACACACTG | + |
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Preference number: 2 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVSWPCI*AWSNTL Trigger: CAGTGTGTTGCTCCAAGCCCATATACAGGGCCAGGA...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTAAACAGGGAGGCTCGCTaGAGGACAGGCATTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RQGSQRAILYVSSVCKGLNREAR*RTGILA Trigger: TGCCAGAATGCCTGTCCTCCAGCGAGCCTCCCTGTT...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | TGTATTTACATTTTGGGACCAAAATACAAATGCAGAGCAGGGTGGTGCTCACTCGGAGGACAGGCATTCTaGCACTCTCACTCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: CIYILGPKYKCRAGWCSLGGQAF*HSHSWP Trigger: GGGCCAGGAGTGAGAGTGCCAGAATGCCTGTCCTCC...GAGTGAGCACCACCCTGCTCTGCATTTGTATTTTGGTCCCAAAATGTAAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCAAACCAGATGCTGACATTGGGACGGGCAAATGCATGTCCTTTCTTTCCAATACCTGTGTCCCATaGCAACAGGGACCCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: CAKPDADIGTGKCMSFLSNTCVP*QQGPSI Trigger: TATGCTGGGTCCCTGTTGCCATGGGACACAGGTATT...GGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CAA 90 bp | TCTGACAGGAAGGAAGAAGCTGGCACTATCCTCCTAGCTCTAACCTaGCCCTTATGCGACCTAGAAATAGGGAATCTTCCTCCTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: SDRKEEAGTILLALT*PLCDLEIGNLPPEL Trigger: CAGTTCAGGAGGAAGATTCCCTATTTCTAGGTCGCATAAGGGCAAGGTTAGAGCTAGGAGGATAGTGCCAGCTTCTTCCTTCCTGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTTCAGAAGGCGGAGGCTaGACAGAGTTCTCTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: APSTNVPLTSAKRPDVRVSEGGG*TEFSAG Trigger: GCCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGA...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCAAACCAGATGCTGACATTGGGACGGGCAAATGCATGTCCTTTCTTTCCCAGGGAAGAGGAGTGTaGTTTGAAGATGATGCACAA | + |
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Preference number: 2 (lower is better) Translates to: CAKPDADIGTGKCMSFLSQGRGV*FEDDAQ Trigger: TTGTGCATCATCTTCAAATCACACTCCTCTTCCCTG...GGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTGTCCTCCAGCAAGCCTaGAAACAGGGAAGAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: APSTNVPLTSAKRPDVRVVLQQA*KQGRGV Trigger: CACTCCTCTTCCCTGTTTTCAGGCTTGCTGGAGGAC...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCGACCCAGGACAAGAATaGCTTTTGCTAGGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: PIESSSTFSDRKEEAGTIDPGQE*LLLGSS Trigger: AGATGAGCCTAGCAAAAGCCATTCTTGTCCTGGGTC...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTACTGTCTTCAGAAATCTaGAGTGTGCTACAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RQGSQRAILYVSSVCKGLLSSEI*SVLQAG Trigger: CCCTGCTTGTAGCACACTTCAGATTTCTGAAGACAG...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | TTATCTGTGCAGGTTTCCTGGACTGCCTTGGGAGTCTTCACTAGCCTGAGGTCTTTTAGCAAACACTACTaGAGAAAGAAAAGCGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSVQVSWTALGVFTSLRSFSKHY*RKKSAH Trigger: ATGGGCGCTTTTCTTTCTTCAGTAGTGTTTGCTAAA...AGACCTCAGGCTAGTGAAGACTCCCAAGGCAGTCCAGGAAACCTGCACAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCTCCACAGCACTACAGTaGTTTAAATCATTCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSSTALQ*FKSFTP Trigger: AGGAGTGAATGATTTAAAGCACTGTAGTGCTGTGGA...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR TCA 90 bp | GCAACCAAGAGAAACAATGTTTTACTTAGCAATACCTGTGTCCCATGGCAACAGGAGTCTTCACTAGCCTaGGGTCTTGAGGGTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ATKRNNVLLSNTCVPWQQESSLA*GLEGAK Trigger: TTTAGCACCCTCAAGACCTCAGGCTAGTGAAGACTC...CTGTTGCCATGGGACACAGGTATTGCTAAGTAAAACATTGTTTCTCTTGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCAAACCAGATGCTGACATTGGGACGGGCAAATGCATGTCCTTTCTTTCCAAGGACTATAGACTTTaGAAACAGCCTTCTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: CAKPDADIGTGKCMSFLSKDYRL*KQPSLA Trigger: TGCTAAAGAAGGCTGTTTGCAAAGTCTATAGTCCTT...GGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | TTATCTGTGCAGGTTTCCTGGACTGCCTTGGGAGTCTTCACTAGCCTGAGGTCTACAAAGCAAAAGATATaGGTCTTCTGTAGATATCCT | + |
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Preference number: 2 (lower is better) Translates to: LSVQVSWTALGVFTSLRSTKQKI*VFCRYP Trigger: AGGATATCTACAGAAGACCCATATCTTTTGCTTTGT...AGACCTCAGGCTAGTGAAGACTCCCAAGGCAGTCCAGGAAACCTGCACAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAACACAGTGGGACACATaGAAGTGTACAGGAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SITDLKVLSRTEAHTVFRTQWDT*KCTGVK Trigger: CTTGACTCCTGTACACTTCCATGTGTCCCACTGTGT...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR GCA 72 bp | CACCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTaGACAGAGTTCTCTGCTGGCCACAGCACAATACCG | + |
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Preference number: 3 (lower is better) Translates to: HPSQGQHSEGGG*TEFSAGHSTIP Trigger: CGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 72 bp | ATGACTGTGTCTGCTTTGTGGCCATTGTGCATGGGGTaGGGGACTGTGGAGACAGCTGCTCACTGGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: MTVSALWPLCMG*GTVETAAHWAL Trigger: GAGGGCCCAGTGAGCAGCTGTCTCCACAGTCCCTCACCCCATGCACAATGGCCACAAAGCAGACACAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR GCA 72 bp | CCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTaGTGGCCACAGCACAATACCGTTCCTCTGGGCACA | + |
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Preference number: 3 (lower is better) Translates to: PTLRRRRLHRVL*WPQHNTVPLGT Trigger: TGTGCCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR GCA 72 bp | AATGCAGAGCAGGGTGGTGCTCACTCCTGCTCCTCCTaGCTCCAAAACAGAGAAAGTGAGCCCCTGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: NAEQGGAHSCSS*LQNRESEPLRA Trigger: GGCTCTCAGGGGCTCACTTTCTCTGTTTTGGAGGCAGGAGGAGCAGGAGTGAGCACCACCCTGCTCTGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | GGTTTAACAGGGAGGCTCGCTGGAGGACAGGCATTCTaGCACTCTCACTCCTGGCCCTGTATATGGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GLTGRLAGGQAF*HSHSWPCIWAW Trigger: CCAAGCCCATATACAGGGCCAGGAGTGAGAGTGCCAGAATGCCTGTCCTCCAGCGAGCCTCCCTGTTAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | CTGCTTTGTGGCCATTGTGCATGGGGTGAGGGACTGTaGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LLCGHCAWGEGL*RQLLTGPSLFS Trigger: TGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGTCCCTCACCCCATGCACAATGGCCACAAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | CTAGAAATAGGGAATCTTCCTCCTGAACTGGTTGGCTaGGACCAGGGTGACCATCCACCCTTCCCAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LEIGNLPPELVG*DQGDHPPFPRP Trigger: TGGCCTTGGGAAGGGTGGATGGTCACCCTGGTCCCAGCCAACCAGTTCAGGAGGAAGATTCCCTATTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 72 bp | GGCCCTGTATATGGGCTTGGAGCAACACACTGGCTCTaGAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: GPVYGLGATHWL*RCPLTSVYSEE Trigger: CTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCTCCAAGCCCATATACAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCAGCAGTCCTATCCCTGTGCCTCAGAAATCTTaGTGTGCCAAACCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TVETAAHWALTVLSSPIPVPQKS*CAKPDA Trigger: AGCATCTGGTTTGGCACACAAAGATTTCTGAGGCAC...AGGGATAGGACTGCTGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 72 bp | TCAGTAGGACTGAGGCTCATACTGTCTTCAGAAATCTaGAGTGTGCTACAAGCAGGGTGCAGGGCTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SVGLRLILSSEI*SVLQAGCRAEA Trigger: TGCCTCAGCCCTGCACCCTGCTTGTAGCACACTTCAGATTTCTGAAGACAGTATGAGCCTCAGTCCTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | GAGTTCTCTGCTGGCCACAGCACAATACCGTTCCTCTaGGCACATCAGCACCTTTCCTTTCAAACAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: EFSAGHSTIPFL*AHQHLSFQTKA Trigger: TGCTTTTGTTTGAAAGGAAAGGTGCTGATGTGCCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | AGAAACAATGTTTTACTTAGCAATACCTGTGTCCCATaGCAACAGGGACCCAGCATAGCAATGCACAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: RNNVLLSNTCVP*QQGPSIAMHSK Trigger: CTTACTGTGCATTGCTATGCTGGGTCCCTGTTGCCATGGGACACAGGTATTGCTAAGTAAAACATTGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 72 bp | GTGTCATCTGTATGTAAAGGGCTAGTCCATCATGTGTaGCCTGTATGTAGTGTAGCACAGAAAACATTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VSSVCKGLVHHV*PVCSVAQKTLH Trigger: GTGCAATGTTTTCTGTGCTACACTACATACAGGTCACACATGATGGACTAGCCCTTTACATACAGATGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR CCA 72 bp | CAGTGTCTACTCAGAAGAGCTGACCCAGGACAAGAATaGCTTTTGCTAGGCTCATCTAACTTTAATAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QCLLRRADPGQE*LLLGSSNFNKG Trigger: TCCTTTATTAAAGTTAGATGAGCCTAGCAAAAGCCATTCTTGTCCTGGGTCAGCTCTTCTGAGTAGACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| 3UTR TCA 72 bp | GTAGCACAGAAAACATTGCACGAGTCTTCACAAATGTaGCCAAAAGTTGAACATGACTGTGTCTGCTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: VAQKTLHESSQM*PKVEHDCVCFV Trigger: CACAAAGCAGACACAGTCATGTTCAACTTTTGGTCACATTTGTGAAGACTCGTGCAATGTTTTCTGTGCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CCATCCACCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTAGCTTCTCCACAACTTaGAGCGCCGACTCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PSTLPKANTQKAEAAQSSSFSTT*SADSAA Trigger: GGCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCT...AGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGGTGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | GCGGAGGCTGCACAGAGTTCTCTGCTGGCCACAGCACAATACCGTTCCTCTGGGCTTGGCTTTGGGCAATaGGTCTCCTGTCCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AEAAQSSLLATAQYRSSGLGFGQ*VSCPSS Trigger: GGACGAGGGACAGGAGACCCATTGCCCAAAGCCAAG...CCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGGACTGGAGTGGAAGTTaGTGCTGCTGTTGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWDWSGS*CCCCWQ Trigger: CTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTC...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGCCACATGCTGCTGCTGTTGCTaGCAGGAACATGGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKANTQKAEAAQSSLLATCCCCC*QEHGCF Trigger: GAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCA...TGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCACTCTCACTCCTGGCCCTGTATATGGGCTTGGAGCAACACACTGGCTCTGCTTCTGGTGTGAGATaGTGGGCTCCTGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALSLLALYMGLEQHTGSASGVR*WAPGPP Trigger: AGGAGGACCAGGAGCCCATCATCTCACACCAGAAGC...AGAGCCAGTGTGTTGCTCCAAGCCCATATACAGGGCCAGGAGTGAGAGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCAGCAGTCCTATCCCTGGGGCTGGTCATAGCTaGGGTAGGACTCGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TVETAAHWALTVLSSPIPGAGHS*GRTRRT Trigger: TGTCCTTCGAGTCCTACCTCAGCTATGACCAGCCCC...AGGGATAGGACTGCTGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGCCACAAGGAAACAGAACTGCTaGCCACAGGAGCTAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKANTQKAEAAQSSLLATRKQNC*PQELSG Trigger: CCCACTTAGCTCCTGTGGCCAGCAGTTCTGTTTCCT...TGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | GCGGAGGCTGCACAGAGTTCTCTGCTGGCCACAGCACAATACCGTTCCTCTGGGTCTTCTCATCCTCTCTaGCATCTGCAGGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEAAQSSLLATAQYRSSGSSHPL*HLQGAS Trigger: AGAAGCACCCTGCAGATGCCAGAGAGGATGAGAAGA...CCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | GCGGAGGCTGCACAGAGTTCTCTGCTGGCCACAGCACAATACCGTTCCTCTGGGTTCTTCTTCCTGGGGTaGAGAGAAAGCTTTTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEAAQSSLLATAQYRSSGFFFLG*RESFSL Trigger: AAGCGAAAAGCTTTCTCTTCACCCCAGGAAGAAGAA...CCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCACTCTCACTCCTGGCCCTGTATATGGGCTTGGAGCAACACACTGGCTCTTGGCAGGAACATGGCTaGTTCCTGTTGTATATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LALSLLALYMGLEQHTGSWQEHG*FLLYMA Trigger: CGCCATATACAACAGGAAGCAGCCATGTTCCTGCCA...AGAGCCAGTGTGTTGCTCCAAGCCCATATACAGGGCCAGGAGTGAGAGTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGTTGCTGGCAGGAACATaGCTGCTTCCTGTTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWLLAGT*LLPVVY Trigger: ATATACAACAGGAAGCAGCCATGTTCCTGCCAGCAA...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTCCAGCTCCTCAGGACTaGAGTGGAAGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRAPAPQD*SGSCCC Trigger: GCAGCAGCAACTTCCACTCCAGTCCTGAGGAGCTGG...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGTCACAGCTGGTTTCCTaGGATCATAGGAAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWSQLVS*DHRKQN Trigger: GTTCTGTTTCCTATGATCCCAGGAAACCAGCTGTGA...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTAGCAGCCAGGCGCGCCTaGAGCTTCTCCACAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQRAILYVSSVCKGLAARRA*SFSTTW Trigger: CCAAGTTGTGGAGAAGCTCCAGGCGCGCCTGGCTGC...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTAGGGCAGCTTCTCCTTaGCACTGTCCCCTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRARAASP*HCPLTV Trigger: TACTGTCAGGGGACAGTGCCAAGGAGAAGCTGCCCT...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | CCATCCACCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTTTCTTCTCAAAATCCTaGTCCTCGGCCTCACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTLPKANTQKAEAAQSSFFSKS*SSASLF Trigger: AAATAGTGAGGCCGAGGATCAGGATTTTGAGAAGAA...AGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGGTGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCTGCTCTCTGGCGTCCTaGAGCCTCAGGTACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIESSSTFSDRKEEAGTICSLAS*SLRYIS Trigger: GGAGATGTACCTGAGGCTTCAGGACGCCAGAGAGCA...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTGCGCTGGCTTTATCCTaGCTTTCTCAGGAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRAALALS*LSQEQL Trigger: CAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGC...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGTGGAGTGGAAGTTGCTaGTGCTGTTGCTGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVWSGSC*CCCWQE Trigger: TTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCA...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTACTCCTGGTCCTCCTCTaGGGACCTGGAGAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQRAILYVSSVCKGLLLVLL*GPGEVC Trigger: ACAGACCTCTCCAGGTCCCCAGAGGAGGACCAGGAG...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGTCGGACATCTCTTGGTaGCTTGGCCACAGAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVSDISW*LGHRVD Trigger: GTCAACTCTGTGGCCAAGCCACCAAGAGATGTCCGA...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | CCATCCACCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTGGGCAATTTCTGAGCTaGGTTCAAGTTTTTACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTLPKANTQKAEAAQSSGQFLS*VQVFTS Trigger: ACTAGTAAAAACTTGAACTCAGCTCAGAAATTGCCC...AGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGGTGGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR GCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCTCGGCTCCAGCTGGCTaGAACTTCTCTGACTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSSAPAG*NFSDLF Trigger: AAACAAGTCAGAGAAGTTGCAGCCAGCTGGAGCCGA...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR GCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGAGAGCTGATCAGGTGTaGACCTCTCCAAGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVRADQV*TSPRQV Trigger: AACCTGTCTTGGAGAGGTGCACACCTGATCAGCTCT...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGATTTCAATAGCTTCTTaGGGTCCGGGTTCGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVISIAS*GPGSQP Trigger: TGGCTGCGAACCCGGACCCCAAGAAGCTATTGAAAT...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCCCTCCTCTGGGGACCTaGAGAGGTCTGTATACATTT | + |
|
Preference number: 4 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSPPLGT*RGLYTF Trigger: AAATGTATACAGACCTCTCCAGGTCCCCAGAGGAGG...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTACTTTTCCTGGCTTCTaGTGTGAGATGATGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRATFPGF*CEMMGS Trigger: GGAGCCCATCATCTCACACCAGAAGCCAGGAAAAGT...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTGAGCCTTCAGGTGGTTaGGAACTTTCTCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRAEPSGG*ELSPWL Trigger: AAGCCAAGGAGAAAGTTCCCAACCACCTGAAGGCTC...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | AGCAATACCTGTGTCCCATGGCAACAGGGACCCAGCATAGCAATGCACAGTAAGGCTTGGCCACAGAGTTaGCAAAAGCCATCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTCVPWQQGPSIAMHSKAWPQS*QKPSLL Trigger: AAGCAAAGATGGCTTTTGTCAACTCTGTGGCCAAGC...CTTACTGTGCATTGCTATGCTGGGTCCCTGTTGCCATGGGACACAGGTATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCGTGAAAACTTCTTCTTaGGACTGCTGCCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSVKTSS*DCCLLC Trigger: ACAGAGAAGGCAGCAGTCTCAAGAAGAAGTTTTCAC...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | CTGGCACTCTCACTCCTGGCCCTGTATATGGGCTTGGAGCAACACACTGGCTCTACTTTGGGCAATTTCTaGGCTGAGTTCAAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LALSLLALYMGLEQHTGSTLGNF*AEFKFL Trigger: TAAAAACTTGAACTCAGCTCAGAAATTGCCCAAAGT...AGAGCCAGTGTGTTGCTCCAAGCCCATATACAGGGCCAGGAGTGAGAGTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGTTTGGCTTATTGGCATaGGCAGAGCGGATGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVFGLLA*AERMLF Trigger: AAACAACATCCGCTCTGCTCATGCCAATAAGCCAAA...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | AGCAACACACTGGCTCTGAAGGTGCCCTTTGACCAGTGTCTACTCAGAAGAGCTGTTCCAAACTTCTCCTaGCTTCTTCGGACATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTLALKVPFDQCLLRRAVPNFS*LLRTSL Trigger: AAGAGATGTCCGAAGAAGGCAGGAGAAGTTTGGAAC...AGCTCTTCTGAGTAGACACTGGTCAAAGGGCACCTTCAGAGCCAGTGTGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | AGCAATACCTGTGTCCCATGGCAACAGGGACCCAGCATAGCAATGCACAGTAAGTTCGGCTTTCCTCTTTaGAAGAGGCTTTGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SNTCVPWQQGPSIAMHSKFGFPL*KRLCVT Trigger: AGTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAA...CTTACTGTGCATTGCTATGCTGGGTCCCTGTTGCCATGGGACACAGGTATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCTCTTCGGACATCTCTTaGTGGCTTGGCCACAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIESSSTFSDRKEEAGTISSDIS*WLGHRV Trigger: AACTCTGTGGCCAAGCCACCAAGAGATGTCCGAAGA...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR TCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGATCCTGGCTTCTGGTGTaGGATGATGGGCTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRSWLLV*DDGLLV Trigger: GACCAGGAGCCCATCATCTCACACCAGAAGCCAGGA...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | TGTGCCAAACCAGATGCTGACATTGGGACGGGCAAATGCATGTCCTTTCTTTCCCTCCAAGTGCTGTACTaGACGTTTTCACAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAKPDADIGTGKCMSFLSLQVLY*TFSQPS Trigger: AGAAGGTTGTGAAAACGTCCAGTACAGCACTTGGAG...GGAAAGAAAGGACATGCATTTGCCCGTCCCAATGTCAGCATCTGGTTTGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCGAAAGCTTTTCGCTTTaGCTGAAAGGAGGGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSESFSL*LKGGNQ Trigger: TTGATTCCCTCCTTTCAGCCAAAGCGAAAAGCTTTC...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS-3UTR CCA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGGGACTCATACTCTTCTaGCCTTTCTTCCTTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVGLILF*PFFLKV Trigger: GACTTTAAGGAAGAAAGGCCAGAAGAGTATGAGTCC...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | TGTATTTACATTTTGGGACCAAAATACAAATGCAGAGCAGGGTGGTGCTCACTCATCCTCTCTGGCATCTaGAGGGTGCTTCTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CIYILGPKYKCRAGWCSLILSGI*RVLLLV Trigger: CACAAGGAGAAGCACCCTGCAGATGCCAGAGAGGAT...GAGTGAGCACCACCCTGCTCTGCATTTGTATTTTGGTCCCAAAATGTAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCTGTGTGACTTCTCTCTaGTCACAGCAGAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIESSSTFSDRKEEAGTICVTSL*SQQRSS Trigger: AGAAGATCTCTGCTGTGAGCAGAGAGAAGTCACACA...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAGGGGATGTCTGGCAATaGTGGCAGCACATCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRGDVWQ*WQHISR Trigger: CCTACTGATGTGCTGCCAGCATTGCCAGACATCCCC...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAAGTTGCTGCTGCTGTTaGTGGCAGGAACATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRSCCCC*WQEHGC Trigger: GCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACT...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | TATAGACTTTGCAAACAGCCTTCTTTAGCAAACACTACTGAAGAAAGAAAAGCGGAGATGATGGGCTCCTaGTCCTCCTCTGGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRLCKQPSLANTTEERKAEMMGS*SSSGDL Trigger: CAGGTCCCCAGAGGAGGACCAGGAGCCCATCATCTC...CGCTTTTCTTTCTTCAGTAGTGTTTGCTAAAGAAGGCTGTTTGCAAAGTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTCTTTCTCCTTGGCTTTaGGCAATGGGTCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVLSPWL*AMGLLS Trigger: GGACAGGAGACCCATTGCCCAAAGCCAAGGAGAAAG...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTTCCTCAGGACTGGAGTaGAAGTTGCTGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVSSGLE*KLLLLL Trigger: CAACAGCAGCAGCAACTTCCACTCCAGTCCTGAGGA...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | GCAACCAAGAGAAACAATGTTTTACTTAGCAATACCTGTGTCCCATGGCAACAGGTGCTTCTCCTTGTGTaGAGATCTGTGCTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATKRNNVLLSNTCVPWQQVLLLV*RSVLLV Trigger: CACAAGCAGCACAGATCTTCACACAAGGAGAAGCAC...CTGTTGCCATGGGACACAGGTATTGCTAAGTAAAACATTGTTTCTCTTGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAGGAAGAGGCTTTGTGTaGCTTCTCTCTGCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRGRGFV*LLSAHS Trigger: GCTGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCC...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTTTTCTCAGGAACAGCTaGTCCCCCGGTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVFLRNS*SPGSKL Trigger: AAGTTTGGAACCGGGGGAGCAGCTGTTCCTGAGAAA...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCGAATCTGTTCTTGAATaGTTTAATGGTCTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSESVLE*FNGLGH Trigger: ATGGCCAAGACCATTAAAGCATTCAAGAACAGATTC...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTTGGGAACTTTCTCCTTaGCTTTGGGCAATGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVWELSP*LWAMGL Trigger: GAGACCCATTGCCCAAAGCCAAGGAGAAAGTTCCCA...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| 3UTR CAA 72 bp | CAAGTTCATAGTGTCTTTCACCTGGCTCATAGCCAATaGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVHSVFHLAHSQ*SPLPRFLTGRK Trigger: CTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGGCTATGAGCCAGGTGAAAGACACTATGAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | TGTATTTACATTTTGGGACCAAAATACAAATGCAGAGCAGGGTGGTGCTCACTCGGTGGTGACACTTTGTaGCACCTCTTCCTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CIYILGPKYKCRAGWCSLGGDTL*HLFLSS Trigger: AGATGAAAGGAAGAGGTGTCACAAAGTGTCACCACC...GAGTGAGCACCACCCTGCTCTGCATTTGTATTTTGGTCCCAAAATGTAAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTATGGCTGCAACTTCTCTaGCTTGTTTTCGTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQRAILYVSSVCKGLWLQLL*LVFVDF Trigger: AAAGTCAACGAAAACAAGTCAGAGAAGTTGCAGCCA...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTCATAGGAAACAGAACTaGTGGCCACAGGAGCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVHRKQN*WPQELS Trigger: ACTTAGCTCCTGTGGCCAGCAGTTCTGTTTCCTATG...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCTAGTACAAATGTCCCTTTAACGTCAGCTAAGAGACCTGATGTTAGAGTTGGAGATAGGCACACTTaGAACCAGAATACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APSTNVPLTSAKRPDVRVGDRHT*NQNTPA Trigger: TGCAGGTGTATTCTGGTTCCAAGTGTGCCTATCTCC...AACTCTAACATCAGGTCTCTTAGCTGACGTTAAAGGGACATTTGTACTAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR TCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGACATTTGATGAGGACTTaGAGGTGGAGGGGATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRHLMRT*RWRGLN Trigger: GTTCAATCCCCTCCACCTTCAAGTCCTCATCAAATG...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| 3UTR CAA 72 bp | AAACATTGCACGAGTCTTCACAAATGTGACCAAAAGTaGAACATGACTGTGTCTGCTTTGTGGCCATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KHCTSLHKCDQK*NMTVSALWPLC Trigger: GCACAATGGCCACAAAGCAGACACAGTCATGTTCAACTTTTGGTCACATTTGTGAAGACTCGTGCAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAGCAATGTCATCATTTTaGGGAGATAGGCACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRAMSSF*GDRHTW Trigger: CCAAGTGTGCCTATCTCCCCAAAATGATGACATTGC...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR GCA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGATTTCCTACTTGCTCATaGTTCCGAAAGCTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SITDLKVLSRTEAHTVFRFPTCS*FRKLFT Trigger: AGTGAACAGCTTTCGGAAGCATGAGCAAGTAGGAAA...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGGAAGATCTGTGCTGCTaGTGGTGGCTAACAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWEDLCC*WWLTAP Trigger: AGGGGCTGTTAGCCACCACAAGCAGCACAGATCTTC...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 90 bp | TGGGCCCATCATAGGCCAGCTCCTCAGGACTGGAGTGGAAGTTGCTaGTGCTGTTGCTGGCAGGAACATGGCTGCTTCCTGTTGTATATG | + |
|
Preference number: 5 (lower is better) Translates to: WAHHRPAPQDWSGSC*CCCWQEHGCFLLYM Trigger: CATATACAACAGGAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCCTGAGGAGCTGGCCTATGATGGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 90 bp | TACTGGGCCCATCATAGGCCAGCTCCTCAGGACTGGAGTGGAAGTTaGTGCTGCTGTTGCTGGCAGGAACATGGCTGCTTCCTGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YWAHHRPAPQDWSGS*CCCCWQEHGCFLLY Trigger: ATACAACAGGAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCCTGAGGAGCTGGCCTATGATGGGCCCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | GCTGCTGCTGTTGCTGGCAGGAACATGGCTGCTTCCTGTTGTATATaGCGCTGGCTTTATCCTGACTTTCTCAGGAACAGCTGCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAVAGRNMAASCCI*RWLYPDFLRNSCSP Trigger: GGGGGAGCAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCATATACAACAGGAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CCATCCACCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTTCGGCTTTCCTCTTaGGAAGAGGCTTTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSTLPKANTQKAEAAQSSLRLSS*EEALCD Trigger: GTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAAG...AGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGGTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | GCGGAGGCTGCACAGAGTTCTCTGCTGGCCACAGCACAATACCGTTCCTCTGGGACATCTCTTGGTGGCTaGGCCACAGAGTTGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AEAAQSSLLATAQYRSSGTSLGG*ATELTK Trigger: TTTTGTCAACTCTGTGGCCAAGCCACCAAGAGATGT...CCCAGAGGAACGGTATTGTGCTGTGGCCAGCAGAGAACTCTGTGCAGCCTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS TCA 90 bp | ATCGTCCACATCTGTCTCCTCCGCTTTAGGGTGGAGCGGGCCTGCTaGCTTTCCATCTGCGTTAGTTCTTACTTTCCCCTCCTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVHICLLRFRVERAC*LSICVSSYFPLLSL Trigger: AAGGCTCAGGAGGGGAAAGTAAGAACTAACGCAGATGGAAAGTCAGCAGGCCCGCTCCACCCTAAAGCGGAGGAGACAGATGTGGACGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | GGCCGCTCAAACTCATCGTCCACATCTGTCTCCTCCGCTTTAGGGTaGAGCGGGCCTGCTGACTTTCCATCTGCGTTAGTTCTTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSNSSSTSVSSALG*SGPADFPSALVLTF Trigger: GAAAGTAAGAACTAACGCAGATGGAAAGTCAGCAGGCCCGCTCCACCCTAAAGCGGAGGAGACAGATGTGGACGATGAGTTTGAGCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCAAGGCCAACACTCAGAAGGCGGAGGCTGCACAGAGTTCTCTGCTGGTCGGAGTCCTTGTGTTaGGGCTTTTTAAAGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFPRPTLRRRRLHRVLCWSESLC*GFLKWL Trigger: CAACCACTTTAAAAAGCCCAAACACAAGGACTCCGA...CCAGCAGAGAACTCTGTGCAGCCTCCGCCTTCTGAGTGTTGGCCTTGGGAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | CCTGGTAGTTCCCCTCCAACTCCTCCTCCCTCTGAAGAGCATCTCTaGGACGCTTACGGGAATTGTTCTTCTCAAAATCCTGATCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSSPPTPPPSEEHL*DAYGNCSSQNPDPR Trigger: CCGAGGATCAGGATTTTGAGAAGAACAATTCCCGTAAGCGTCCCAGAGATGCTCTTCAGAGGGAGGAGGAGTTGGAGGGGAACTACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCAGCAGTCCTATCCCTGGTGAAAACTTCTTCTaGAGACTGCTGCCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVETAAHWALTVLSSPIPGENFF*RLLPSL Trigger: CAGAGAAGGCAGCAGTCTCAAGAAGAAGTTTTCACC...AGGGATAGGACTGCTGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS TCA 90 bp | GATCTTCTCATCCTCTCTGGCATCTGCAGGGTGCTTCTCCTTGTGTaGAGATCTGTGCTGCTTGTGGTGGCTAACAGCCCCTTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLLILSGICRVLLLV*RSVLLVVANSPFSL Trigger: CAAGGAAAAGGGGCTGTTAGCCACCACAAGCAGCACAGATCTTCACACAAGGAGAAGCACCCTGCAGATGCCAGAGAGGATGAGAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | TCAGGACTGGAGTGGAAGTTGCTGCTGCTGTTGCTGGCAGGAACATaGCTGCTTCCTGTTGTATATGGCGCTGGCTTTATCCTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGLEWKLLLLLLAGT*LLPVVYGAGFILTF Trigger: GAAAGTCAGGATAAAGCCAGCGCCATATACAACAGGAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | TGTATTTACATTTTGGGACCAAAATACAAATGCAGAGCAGGGTGGTGCTCACTCGAGCTTCTCCACAACTaGGAGCGCCGACTCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CIYILGPKYKCRAGWCSLELLHN*ERRLRR Trigger: GCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCTC...GAGTGAGCACCACCCTGCTCTGCATTTGTATTTTGGTCCCAAAATGTAAATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGAGACAGCTGCTCACTGGGCCCTCACTGTTCTCAGCAGTCCTATCCCTGCTTTCTCGGAGTCCTaGTGTTTGGGCTTTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVETAAHWALTVLSSPIPAFSES*CLGFLK Trigger: CTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGC...AGGGATAGGACTGCTGAGAACAGTGAGGGCCCAGTGAGCAGCTGTCTCCACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCACTTTCTCCTTGGCTTaGGGCAATGGGTCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSTFSLA*GNGSPV Trigger: GACAGGAGACCCATTGCCCAAAGCCAAGGAGAAAGT...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 90 bp | GTCTTCGGCTTTCCTCTTTGGAAGAGGCTTTGTGTGACTTCTCTCTaGTCACAGCAGAGATCTTCTCATCCTCTCTGGCATCTGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFGFPLWKRLCVTSL*SQQRSSHPLWHLQG Trigger: ACCCTGCAGATGCCAGAGAGGATGAGAAGATCTCTGCTGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 90 bp | TGTTGTATATGGCGCTGGCTTTATCCTGACTTTCTCAGGAACAGCTaGTCCCCCGGTTCCAAACTTCTCCTGCCTTCTTCGGACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCIWRWLYPDFLRNS*SPGSKLLLPSSDIS Trigger: AGAGATGTCCGAAGAAGGCAGGAGAAGTTTGGAACCGGGGGAGCAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCATATACAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTGCTGTCTGTCCCCTCAAGTTCATAGTGTCTTTCACCTGGCTCATAGCGGCTTGGCCACAGAGTaGACAAAAGCCATCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CQCCLSPQVHSVFHLAHSGLATE*TKAIFA Trigger: AGCAAAGATGGCTTTTGTCAACTCTGTGGCCAAGCC...GCTATGAGCCAGGTGAAAGACACTATGAACTTGAGGGGACAGACAGCACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 90 bp | AATGGGTCTCCTGTCCCTCGTCCTGAGTCCACGCCATCTACACTCTaGTTGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NGSPVPRPESTPSTL*LFLSDLAFSESLCL Trigger: CAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACGAGGGACAGGAGACCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CTGCTATGTCTGTTTCCCCACAGTGCAGGGAAAGGCAAAATAAGGGCAGGTGTGTCTTTGGAAGAGGCTTaGTGTGACTTCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCLFPHSAGKGKIRAGVSLEEA*CDFSLL Trigger: GAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGA...CACACCTGCCCTTATTTTGCCTTTCCCTGCACTGTGGGGAAACAGACATAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | GTCCTGAAGCCTCAGGTACATCTCCCTCCAGGACTCATACTCTTCTaGCCTTTCTTCCTTAAAGTCTCGGTGACAGTGAACTTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VLKPQVHLPPGLILF*PFFLKVSVTVNFPQ Trigger: TTGTGGAAAGTTCACTGTCACCGAGACTTTAAGGAAGAAAGGCCAGAAGAGTATGAGTCCTGGAGGGAGATGTACCTGAGGCTTCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | AGTATAACTGATCTTAAAGTCCTCAGTAGGACTGAGGCTCATACTGTCTTCAGAGGACTGGAGTGGAAGTaGCTGCTGCTGTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SITDLKVLSRTEAHTVFRGLEWK*LLLLLA Trigger: TGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCC...TCTGAAGACAGTATGAGCCTCAGTCCTACTGAGGACTTTAAGATCAGTTATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCAGAAAGCTTTTCGCTTaGGCTGAAAGGAGGGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PIESSSTFSDRKEEAGTIRKLFA*AERRES Trigger: TGATTCCCTCCTTTCAGCCAAAGCGAAAAGCTTTCT...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | GCAACCAAGAGAAACAATGTTTTACTTAGCAATACCTGTGTCCCATGGCAACAGTTCTTCGGACATCTCTaGGTGGCTTGGCCACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATKRNNVLLSNTCVPWQQFFGHL*VAWPQS Trigger: ACTCTGTGGCCAAGCCACCAAGAGATGTCCGAAGAA...CTGTTGCCATGGGACACAGGTATTGCTAAGTAAAACATTGTTTCTCTTGGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CCAATTGAGTCCTCTTCCACGTTTTCTGACAGGAAGGAAGAAGCTGGCACTATCACACTCTGCTTGTTTTaGTCAGATTTGGCTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PIESSSTFSDRKEEAGTITLCLF*SDLAFS Trigger: CGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGT...GATAGTGCCAGCTTCTTCCTTCCTGTCAGAAAACGTGGAAGAGGACTCAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS-3UTR CAA 90 bp | CGCCAAGGATCGCAAAGGGCTATTCTGTATGTGTCATCTGTATGTAAAGGGCTATGCAACTTCTCTGACTaGTTTTCGTTGACTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQGSQRAILYVSSVCKGLCNFSD*FSLTLG Trigger: GCCCAAAGTCAACGAAAACAAGTCAGAGAAGTTGCA...TAGCCCTTTACATACAGATGACACATACAGAATAGCCCTTTGCGATCCTTGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 90 bp | TCAGATTTGGCTTTCTCGGAGTCCTTGTGTTTGGGCTTTTTAAAGTaGTTGTCTGAAGCAACATCTAAGGCAGGTGAAAACTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLAFSESLCLGFLK*LSEATSKAGENFFL Trigger: CAAGAAGAAGTTTTCACCTGCCTTAGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 72 bp | CATAGGCCAGCTCCTCAGGACTGGAGTGGAAGTTGCTaGTGCTGTTGCTGGCAGGAACATGGCTGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRPAPQDWSGSC*CCCWQEHGCFL Trigger: CAGGAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCCTGAGGAGCTGGCCTATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 72 bp | CATCATAGGCCAGCTCCTCAGGACTGGAGTGGAAGTTaGTGCTGCTGTTGCTGGCAGGAACATGGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HHRPAPQDWSGS*CCCCWQEHGCF Trigger: GAAGCAGCCATGTTCCTGCCAGCAACAGCAGCAGCAACTTCCACTCCAGTCCTGAGGAGCTGGCCTATGATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS CCA 72 bp | GAGCCTTCAGGTGGTTGGGAACTTTCTCCTTGGCTTTaGGCAATGGGTCTCCTGTCCCTCGTCCTGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EPSGGWELSPWL*AMGLLSLVLSP Trigger: TGGACTCAGGACGAGGGACAGGAGACCCATTGCCCAAAGCCAAGGAGAAAGTTCCCAACCACCTGAAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS GCA 72 bp | TGGCGCTGGCTTTATCCTGACTTTCTCAGGAACAGCTaGTCCCCCGGTTCCAAACTTCTCCTGCCTTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: WRWLYPDFLRNS*SPGSKLLLPSS Trigger: CGAAGAAGGCAGGAGAAGTTTGGAACCGGGGGAGCAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS TCA 72 bp | ATCTGTCTCCTCCGCTTTAGGGTGGAGCGGGCCTGCTaGCTTTCCATCTGCGTTAGTTCTTACTTTCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ICLLRFRVERAC*LSICVSSYFPL Trigger: GAGGGGAAAGTAAGAACTAACGCAGATGGAAAGTCAGCAGGCCCGCTCCACCCTAAAGCGGAGGAGACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
||
| CDS TCA 72 bp | CAACCTTCTTCTTTTTCTTCCGGGGCTGGTCATAGCTaGGGTAGGACTCGAAGGACATCGTGGGCCGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QPSSFSSGAGHS*GRTRRTSWAAQ Trigger: TTGAGCGGCCCACGATGTCCTTCGAGTCCTACCTCAGCTATGACCAGCCCCGGAAGAAAAAGAAGAAGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | GCCATCTTTGCTTGTCGTCCCTTTGGCTTATTGGCATaGGCAGAGCGGATGTTGTTTGTGAGCAGGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AIFACRPFGLLA*AERMLFVSRRS Trigger: GCTGCGCCTGCTCACAAACAACATCCGCTCTGCTCATGCCAATAAGCCAAAGGGACGACAAGCAAAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | GGCTGCTTCCTGTTGTATATGGCGCTGGCTTTATCCTaGCTTTCTCAGGAACAGCTGCTCCCCCGGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GCFLLYMALALS*LSQEQLLPRFQ Trigger: TTGGAACCGGGGGAGCAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCATATACAACAGGAAGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | AGGGAATCAACTCAAGGGAAGGAAGGGGCCGGTAGTTaGCATGAATGGCAGGTAAGGGGATGTCTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: RESTQGKEGAGS*HEWQVRGCLAM Trigger: CATTGCCAGACATCCCCTTACCTGCCATTCATGCCAACTACCGGCCCCTTCCTTCCCTTGAGTTGATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | GGGTCTCCTGTCCCTCGTCCTGAGTCCACGCCATCTACACTCTGCTaGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GSPVPRPESTPSTLC*FLSDLAFSESLCLG Trigger: GCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACGAGGGACAGGAGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | CCTGGTGGGTTCGGCTCCAGCTGGCTGCAACTTCTCTaGCTTGTTTTCGTTGACTTTGGGCAATTTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: PGGFGSSWLQLL*LVFVDFGQFLS Trigger: GCTCAGAAATTGCCCAAAGTCAACGAAAACAAGTCAGAGAAGTTGCAGCCAGCTGGAGCCGAACCCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS GCA 72 bp | GCAGAGATCTTCTCATCCTCTCTGGCATCTGCAGGGTaGTTCTCCTTGTGTGAAGATCTGTGCTGCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AEIFSSSLASAG*FSLCEDLCCLW Trigger: CCACAAGCAGCACAGATCTTCACACAAGGAGAAGCACCCTGCAGATGCCAGAGAGGATGAGAAGATCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS GCA 72 bp | CCTGTCCCTCGTCCTGAGTCCACGCCATCTACACTCTaGTTGTTTTTGTCAGATTTGGCTTTCTCGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PVPRPESTPSTL*LFLSDLAFSES Trigger: GGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACGAGGGACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | GGCAGGAACATGGCTGCTTCCTGTTGTATATGGCGCTaGCTTTATCCTGACTTTCTCAGGAACAGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GRNMAASCCIWR*LYPDFLRNSCS Trigger: GGAGCAGCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCATATACAACAGGAAGCAGCCATGTTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | CCTCCTCTGGGGACCTGGAGAGGTCTGTATACATTTGATGAGGACTaGAAGGTGGAGGGGATTGAACATGGCCATAGTCAGATGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: PPLGTWRGLYTFDED*KVEGIEHGHSQMTR Trigger: CCGAGTCATCTGACTATGGCCATGTTCAATCCCCTCCACCTTCAAGTCCTCATCAAATGTATACAGACCTCTCCAGGTCCCCAGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | GCAGAGATCTTCTCATCCTCTCTGGCATCTGCAGGGTGCTTCTCCTaGTGTGAAGATCTGTGCTGCTTGTGGTGGCTAACAGCCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AEIFSSSLASAGCFS*CEDLCCLWWLTAPF Trigger: AAAAGGGGCTGTTAGCCACCACAAGCAGCACAGATCTTCACACAAGGAGAAGCACCCTGCAGATGCCAGAGAGGATGAGAAGATCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | TTCTCCTTGGCACTGTCCCCTGACAGTAGTCTTCGGCTTTCCTCTTaGGAAGAGGCTTTGTGTGACTTCTCTCTGCTCACAGCAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: FSLALSPDSSLRLSS*EEALCDFSLLTAEI Trigger: GATCTCTGCTGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAAGACTACTGTCAGGGGACAGTGCCAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS GCA 72 bp | TCTGCAGGGTGCTTCTCCTTGTGTGAAGATCTGTGCTaGTTGTGGTGGCTAACAGCCCCTTTTCCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAGCFSLCEDLC*LWWLTAPFPCS Trigger: TGAACAAGGAAAAGGGGCTGTTAGCCACCACAAGCAGCACAGATCTTCACACAAGGAGAAGCACCCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | CACTGTCCCCTGACAGTAGTCTTCGGCTTTCCTCTTTaGAAGAGGCTTTGTGTGACTTCTCTCTGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HCPLTVVFGFPL*KRLCVTSLCSQ Trigger: CTGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAAGACTACTGTCAGGGGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | GTTGCTGGCAGGAACATGGCTGCTTCCTGTTGTATATaGCGCTGGCTTTATCCTGACTTTCTCAGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: VAGRNMAASCCI*RWLYPDFLRNS Trigger: GCTGTTCCTGAGAAAGTCAGGATAAAGCCAGCGCCATATACAACAGGAAGCAGCCATGTTCCTGCCAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | TTCTCATCCTCTCTGGCATCTGCAGGGTGCTTCTCCTaGTGTGAAGATCTGTGCTGCTTGTGGTGGCTAACA | + |
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Preference number: 6 (lower is better) Translates to: FSSSLASAGCFS*CEDLCCLWWLT Trigger: TGTTAGCCACCACAAGCAGCACAGATCTTCACACAAGGAGAAGCACCCTGCAGATGCCAGAGAGGATGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | GCACTGTCCCCTGACAGTAGTCTTCGGCTTTCCTCTTaGGAAGAGGCTTTGTGTGACTTCTCTCTGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: ALSPDSSLRLSS*EEALCDFSLLT Trigger: TGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGAGGAAAGCCGAAGACTACTGTCAGGGGACAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | GTCCCTCGTCCTGAGTCCACGCCATCTACACTCTGCTaGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VPRPESTPSTLC*FLSDLAFSESL Trigger: CAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACGAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | CTTCTTCGGACATCTCTTGGTGGCTTGGCCACAGAGTaGACAAAAGCCATCTTTGCTTGTCGTCCCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLRTSLGGLATE*TKAIFACRPFG Trigger: GCCAAAGGGACGACAAGCAAAGATGGCTTTTGTCAACTCTGTGGCCAAGCCACCAAGAGATGTCCGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | TTCTCCTGCCTTCTTCGGACATCTCTTGGTGGCTTGGCCACAGAGTaGACAAAAGCCATCTTTGCTTGTCGTCCCTTTGGCTTATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FSCLLRTSLGGLATE*TKAIFACRPFGLLA Trigger: TGCCAATAAGCCAAAGGGACGACAAGCAAAGATGGCTTTTGTCAACTCTGTGGCCAAGCCACCAAGAGATGTCCGAAGAAGGCAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | CTGGGACGCTTACGGGAATTGTTCTTCTCAAAATCCTaGTCCTCGGCCTCACTATTTCGCTCTACTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LGRLRELFFSKS*SSASLFRSTGT Trigger: GGTTCCAGTAGAGCGAAATAGTGAGGCCGAGGATCAGGATTTTGAGAAGAACAATTCCCGTAAGCGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | GACTTTCCATCTGCGTTAGTTCTTACTTTCCCCTCCTaGGCCTTCAGGTGGTTGGGAACTTTCTCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DFPSALVLTFPS*AFRWLGTFSLA Trigger: AGCCAAGGAGAAAGTTCCCAACCACCTGAAGGCTCAGGAGGGGAAAGTAAGAACTAACGCAGATGGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | GCACCCGGATACACTGCTGGTGCAATGTCATCATTTTaGGGAGATAGGCACACTTGGAACCAGAATACACCT | + |
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Preference number: 6 (lower is better) Translates to: APGYTAGAMSSF*GDRHTWNQNTP Trigger: AGGTGTATTCTGGTTCCAAGTGTGCCTATCTCCCCAAAATGATGACATTGCACCAGCAGTGTATCCGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | CCTGTCCCTCGTCCTGAGTCCACGCCATCTACACTCTGCTTGTTTTaGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTTGGGCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PVPRPESTPSTLCLF*SDLAFSESLCLGFL Trigger: TAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACGAGGGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS TCA 72 bp | GGACCTGGAGAGGTCTGTATACATTTGATGAGGACTTaGAGGTGGAGGGGATTGAACATGGCCATAGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GPGEVCIHLMRT*RWRGLNMAIVR Trigger: TCTGACTATGGCCATGTTCAATCCCCTCCACCTTCAAGTCCTCATCAAATGTATACAGACCTCTCCAGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | CGTCCTGAGTCCACGCCATCTACACTCTGCTTGTTTTaGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: RPESTPSTLCLF*SDLAFSESLCL Trigger: CAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | CGTCCTGAGTCCACGCCATCTACACTCTGCTTGTTTTTGTCAGATTaGGCTTTCTCGGAGTCCTTGTGTTTGGGCTTTTTAAAGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RPESTPSTLCLFLSD*AFSESLCLGFLKWL Trigger: CAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGATGGCGTGGACTCAGGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS GCA 72 bp | TTTCCTCTTTGGAAGAGGCTTTGTGTGACTTCTCTCTaGTCACAGCAGAGATCTTCTCATCCTCTCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FPLWKRLCVTSL*SQQRSSHPLWH Trigger: ATGCCAGAGAGGATGAGAAGATCTCTGCTGTGAGCAGAGAGAAGTCACACAAAGCCTCTTCCAAAGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | AGAGTTGACAAAAGCCATCTTTGCTTGTCGTCCCTTTaGCTTATTGGCATGAGCAGAGCGGATGTTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RVDKSHLCLSSL*LIGMSRADVVC Trigger: ACAAACAACATCCGCTCTGCTCATGCCAATAAGCCAAAGGGACGACAAGCAAAGATGGCTTTTGTCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CCA 72 bp | GCTTTCTCGGAGTCCTTGTGTTTGGGCTTTTTAAAGTaGTTGTCTGAAGCAACATCTAAGGCAGGTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: AFSESLCLGFLK*LSEATSKAGEN Trigger: GTTTTCACCTGCCTTAGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | CTCTGCTTGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTaGGGCTTTTTAAAGTGGTTGTCTGAAGCAACATCTAAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LCLFLSDLAFSESLC*GFLKWLSEATSKAG Trigger: ACCTGCCTTAGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | GATTTGGCTTTCTCGGAGTCCTTGTGTTTGGGCTTTTTAAAGTGGTaGTCTGAAGCAACATCTAAGGCAGGTGAAAACTTCTTCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: DLAFSESLCLGFLKW*SEATSKAGENFFLR Trigger: TCTCAAGAAGAAGTTTTCACCTGCCTTAGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | TGCTTGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTaGTGTTTGGGCTTTTTAAAGTGGTTGTCTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: CLFLSDLAFSES*CLGFLKWLSEA Trigger: TGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 90 bp | TCTACACTCTGCTTGTTTTTGTCAGATTTGGCTTTCTCGGAGTCCTaGTGTTTGGGCTTTTTAAAGTGGTTGTCTGAAGCAACATCTAAG | + |
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Preference number: 6 (lower is better) Translates to: STLCLFLSDLAFSES*CLGFLKWLSEATSK Trigger: CTTAGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAACAAGCAGAGTGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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| CDS CAA 72 bp | TTTTTGTCAGATTTGGCTTTCTCGGAGTCCTTGTGTTaGGGCTTTTTAAAGTGGTTGTCTGAAGCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: FLSDLAFSESLC*GFLKWLSEATS Trigger: AGATGTTGCTTCAGACAACCACTTTAAAAAGCCCAAACACAAGGACTCCGAGAAAGCCAAATCTGACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030427.6 |
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