Pregenerated sensors for ELK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008398Ensembl transcript IDs: ENSMUST00000008542.12, ENSMUST00000129827.8, ENSMUST00000151153.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCGTGTGGCCGCGGAGGAAGCCCTGCAGCTGTAGGAAAGCTGTaGGCAGGGACGGAGTTCAGCTCCCACAGTGAGGTTCTAGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: HPCGRGGSPAAVGKL*AGTEFSSHSEVLEL Trigger: GAGCTCTAGAACCTCACTGTGGGAGCTGAACTCCGTCCCTGCGCACAGCTTTCCTACAGCTGCAGGGCTTCCTCCGCGGCCACACGGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | GGTGGCCCATCATCAGGATTTCTGAGAGCTGGGGGACAGCAGAACTaGGGATGGAGCTCTGTCCAGACTGGGGAGCGGCACCGGCATGTG | + |
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Preference number: 1 (lower is better) Translates to: GGPSSGFLRAGGQQN*GWSSVQTGERHRHV Trigger: CACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCTCCATCCCCAGTTCTGCTGTCCCCCAGCTCTCAGAAATCCTGATGATGGGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR TCA 90 bp | AGCTGTAGGAAAGCTGTGCGCAGGGACGGAGTTCAGCTCCCACAGTaGGGTTCTAGAGCTCCAACCTCACTCAGCCTCAGCAGTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: SCRKAVRRDGVQLPQ*GSRAPTSLSLSSQT Trigger: TGTTTGACTGCTGAGGCTGAGTGAGGTTGGAGCTCTAGAACCTCACTGTGGGAGCTGAACTCCGTCCCTGCGCACAGCTTTCCTACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 90 bp | GCGGAGCATCTGAGGAGCTGCTGCATCCGTTTCAGAGGGAGATCCTaGCAAGTCTCCCCTTCTCAGAGTCCCTTTATTCTCATCATCATT | + |
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Preference number: 1 (lower is better) Translates to: AEHLRSCCIRFRGRS*QVSPSQSPFILIII Trigger: AATGATGATGAGAATAAAGGGACTCTGAGAAGGGGAGACTTGTCAGGATCTCCCTCTGAAACGGATGCAGCAGCTCCTCAGATGCTCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | TTTCCCACCACGCCCTTTTTGGGGAGAGACAGGGAGACAGGTTACTaGGGTTTATACCCACAGCCTCAACACATGCAGGTTACACATTCT | + |
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Preference number: 1 (lower is better) Translates to: FPTTPFLGRDRETGY*GLYPQPQHMQVTHS Trigger: AGAATGTGTAACCTGCATGTGTTGAGGCTGTGGGTATAAACCCCAGTAACCTGTCTCCCTGTCTCTCCCCAAAAAGGGCGTGGTGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | GTATTTATTCAGCAAAACAGTATTACAGTAAAAACGACACCCGTGTaGCCGCGGAGGAAGCCCTGCAGCTGTAGGAAAGCTGTGCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VFIQQNSITVKTTPV*PRRKPCSCRKAVRR Trigger: CCTGCGCACAGCTTTCCTACAGCTGCAGGGCTTCCTCCGCGGCCACACGGGTGTCGTTTTTACTGTAATACTGTTTTGCTGAATAAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 90 bp | AAGGCAGTTCTTACCGCGATGGAGGTTCACTTGAACGTGTCTACGTaGGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: KAVLTAMEVHLNVST*ENNPLRRAVGCQGV Trigger: GACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGTTCAAGTGAACCTCCATCGCGGTAAGAACTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR TCA 90 bp | AGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTGGCTCTTaGGTGCTCATCCTCAGAAGCAAGGCCTTCAGTTCCTCCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SPFILIIITTESGGS*VLILRSKAFSSSSS Trigger: AGAGCTGGAGGAACTGAAGGCCTTGCTTCTGAGGATGAGCACTCAAGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | CAGAGAGGCTGTCGTTCTCCATTCTACAGTCCTCATGCCAGCATCTaGGTCCACAGGAGAATCATGGTAGTTGGAAGAAAAGGAATCAAC | + |
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Preference number: 1 (lower is better) Translates to: QRGCRSPFYSPHASI*VHRRIMVVGRKGIN Trigger: GTTGATTCCTTTTCTTCCAACTACCATGATTCTCCTGTGGACCCAGATGCTGGCATGAGGACTGTAGAATGGAGAACGACAGCCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | TTCTCAGAGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTaGCTCTTGAGTGCTCATCCTCAGAAGCAAGGCCTTCAGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: FSESLYSHHHYYRKR*LLSAHPQKQGLQFL Trigger: GAGGAACTGAAGGCCTTGCTTCTGAGGATGAGCACTCAAGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACTCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 90 bp | AGCAGGGCTAGTCTCAAAATTAAATACAAACCTGGAAAGTCCCCTTaGGAGTTTGGCTGGTGTGAACTTAACGGAGCCTTAGCATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SRASLKIKYKPGKSP*EFGWCELNGALAFQ Trigger: CTGGAATGCTAAGGCTCCGTTAAGTTCACACCAGCCAAACTCTCAAGGGGACTTTCCAGGTTTGTATTTAATTTTGAGACTAGCCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 90 bp | GCTCCTTTTTATTTTAGTACACATTTATTCTTCGCCGTGAGGGAGTaGCAGGGCATCTATTTATGGGCTTGGAGCTGTCTCCATGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: APFYFSTHLFFAVRE*QGIYLWAWSCLHGF Trigger: AAAGCCATGGAGACAGCTCCAAGCCCATAAATAGATGCCCTGCCACTCCCTCACGGCGAAGAATAAATGTGTACTAAAATAAAAAGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATATCGGCCCTTGCAGCCTaGCAGGACTCAGTGGGGCGA | + |
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Preference number: 2 (lower is better) Translates to: LYGELLDAKVSFKQFLSISALAA*QDSVGR Trigger: TCGCCCCACTGAGTCCTGCCAGGCTGCAAGGGCCGA...TATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATGCAAAGGAAGGCACAGCTGGTTACATCGTGTATGCAAGCGGAGTTCAAGTGTGTTCGGCCCTTaGAGCCTGGCAGGACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: TKCKGRHSWLHRVCKRSSSVFGP*SLAGLS Trigger: ACTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACT...TGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCACAATGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGCAGCAGAACTGGGGATaGAGCTCTGTCCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VSQCPSHDTGKLAHGDKLQQNWG*SSVQTG Trigger: CCCAGTCTGGACAGAGCTCCATCCCCAGTTCTGCTG...CAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACATTGTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR CAA 90 bp | GAGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTGGCTCTaGAGTGCTCATCCTCAGAAGCAAGGCCTTCAGTTCCTCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ESLYSHHHYYRKRWL*SAHPQKQGLQFLQL Trigger: GAGCTGGAGGAACTGAAGGCCTTGCTTCTGAGGATGAGCACTCAAGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR-3UTR TCA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTCCTGTGTGCCTGTCTTaGCCAGAGAACAGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AEFLLLKTQKAERLSFSIPVCLS*PENSWK Trigger: CTTCCAGCTGTTCTCTGGTCAAGACAGGCACACAGG...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR-3UTR TCA 90 bp | TTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAAATACATAAAAGCGGCACCGGCATGTaGCCGTTGAGCAGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LDAKVSFKQFLSILEIHKSGTGM*PLSSVG Trigger: CCCCACACTGCTCAACGGTCACATGCCGGTGCCGCT...TTTATGTATTTCTAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR-3UTR CCA 90 bp | TGTATGCAAGCGGAGTTCAGCATATGTAGAGTTAAAGCAATAAAAGGCTTCACAGAGCTCTGTCCAGACTaGGGAGCGGCACCGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: CMQAEFSICRVKAIKGFTELCPD*GAAPAC Trigger: ACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCTC...TGTGAAGCCTTTTATTGCTTTAACTCTACATATGCTGAACTCCGCTTGCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR-3UTR CCA 90 bp | CTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACGGGGGACAGCAGAACTaGGGATGGAGCTCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LISYIENIKKGSSLAVFNGGQQN*GWSSVQ Trigger: CTGGACAGAGCTCCATCCCCAGTTCTGCTGTCCCCC...GTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATGTACATAACACTAAATaGAAAGGAAGGCACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNVHNTK*KGRHSW Trigger: CCAGCTGTGCCTTCCTTTGCATTTAGTGTTATGTAC...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAACCTCACTCAGCCTCAGCAGTCAAACACTGATGACGCAAGCATAGAAAAAGTGCAAACCAAATaGACCAGGTTTCACAATGTC | + |
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Preference number: 2 (lower is better) Translates to: SSNLTQPQQSNTDDASIEKVQTK*TRFHNV Trigger: GACATTGTGAAACCTGGTTCATTTGGTTTGCACTTT...TTCTATGCTTGCGTCATCAGTGTTTGACTGCTGAGGCTGAGTGAGGTTGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATCCATGTTACGAAAAGTaGAAACCAAATGAACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNPCYEK*KPNEPG Trigger: ACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGG...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATAGTACATAACACTAAATaGAAAGGAAGGCACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LYGELLDAKVSFKQFLSIVHNTK*KGRHSW Trigger: CCAGCTGTGCCTTCCTTTGCATTTAGTGTTATGTAC...TATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCTTGGGAGCCTACGTTCCGGCTGAATTTCTCCTGTTAAAAACACAGAAGTTGGAGCTGTCTCCATaGCTTTACAGTCAGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: MLLGAYVPAEFLLLKTQKLELSP*LYSQRF Trigger: AAACCTCTGACTGTAAAGCCATGGAGACAGCTCCAA...CTTCTGTGTTTTTAACAGGAGAAATTCAGCCGGAACGTAGGCTCCCAAGAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR-3UTR GCA 90 bp | CTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACCCATGTTACGAAAAGTaGAAACCAAATGAACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LISYIENIKKGSSLAVFNPCYEK*KPNEPG Trigger: ACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGG...GTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTATCTTGAATTTAAAGTaGCTTGCCTTCAGAGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: AEFLLLKTQKAERLSFSIILNLK*LAFRVL Trigger: TAACACTCTGAAGGCAAGGCACTTTAAATTCAAGAT...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CAA 90 bp | TGTAGAGTTAAAGCAATAAAAGGCTTCACATCCTCATTAGTTACATaGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACACTC | + |
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Preference number: 2 (lower is better) Translates to: CRVKAIKGFTSSLVT*KTLRKAPPWQCSTL Trigger: GAGTGTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAGGATGTGAAGCCTTTTATTGCTTTAACTCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR CAA 90 bp | TTGTCTAAATATGGCTTCGTTCATTCTTATATAAAAACCCATCACTaGGACATTACTGGATTTCAGTTCCGAAGAGGTCCTAAGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LSKYGFVHSYIKTHH*DITGFQFRRGPKAV Trigger: AACTGCCTTAGGACCTCTTCGGAACTGAAATCCAGTAATGTCCAAGTGATGGGTTTTTATATAAGAATGAACGAAGCCATATTTAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR GCA 72 bp | GGCCGCGGAGGAAGCCCTGCAGCTGTAGGAAAGCTGTaGGCAGGGACGGAGTTCAGCTCCCACAGTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: GRGGSPAAVGKL*AGTEFSSHSEV Trigger: AACCTCACTGTGGGAGCTGAACTCCGTCCCTGCGCACAGCTTTCCTACAGCTGCAGGGCTTCCTCCGCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | CTGCTCGCGTCACAGCCGGAAGCCATACTCAGCACGTaGAGCCTTCCCTGCGGAGCATCTGAGGAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LLASQPEAILST*SLPCGASEELL Trigger: CAGCAGCTCCTCAGATGCTCCGCAGGGAAGGCTTCACGTGCTGAGTATGGCTTCCGGCTGTGACGCGAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | AAAGCTGTGCGCAGGGACGGAGTTCAGCTCCCACAGTaGGGTTCTAGAGCTCCAACCTCACTCAGCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: KAVRRDGVQLPQ*GSRAPTSLSLS Trigger: GCTGAGGCTGAGTGAGGTTGGAGCTCTAGAACCTCACTGTGGGAGCTGAACTCCGTCCCTGCGCACAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | CATACTCAGCACGTGAAGCCTTCCCTGCGGAGCATCTaGGGAGCTGCTGCATCCGTTTCAGAGGGAGATCCT | + |
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Preference number: 3 (lower is better) Translates to: HTQHVKPSLRSI*GAAASVSEGDP Trigger: AGGATCTCCCTCTGAAACGGATGCAGCAGCTCCTCAGATGCTCCGCAGGGAAGGCTTCACGTGCTGAGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | TCCTTACGTTCTGAGGCTCTCTTACTCTTCCCTCAGTaGATGCTATGGCCCCAGGCAGCTCCAGGCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SLRSEALLLFPQ*MLWPQAAPGQL Trigger: AAGCTGGCCTGGAGCTGCCTGGGGCCATAGCATCCACTGAGGGAAGAGTAAGAGAGCCTCAGAACGTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | CTGAGGAGCTGCTGCATCCGTTTCAGAGGGAGATCCTaGCAAGTCTCCCCTTCTCAGAGTCCCTTTATTCTC | + |
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Preference number: 3 (lower is better) Translates to: LRSCCIRFRGRS*QVSPSQSPFIL Trigger: GAGAATAAAGGGACTCTGAGAAGGGGAGACTTGTCAGGATCTCCCTCTGAAACGGATGCAGCAGCTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | AGAGCCGGGGATGCTCTTGGGAGCCTACGTTCCGGCTaGATTTCTCCTGTTAAAAACACAGAAGGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RAGDALGSLRSG*ISPVKNTEGRE Trigger: CTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGCCGGAACGTAGGCTCCCAAGAGCATCCCCGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR GCA 72 bp | GCAGAGAGGCTGTCGTTCTCCATTCTACAGTCCTCATaGCAGCATCTGGGTCCACAGGAGAATCATGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: AERLSFSILQSS*QHLGPQENHGS Trigger: ACTACCATGATTCTCCTGTGGACCCAGATGCTGGCATGAGGACTGTAGAATGGAGAACGACAGCCTCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | ACGCCCTTTTTGGGGAGAGACAGGGAGACAGGTTACTaGGGTTTATACCCACAGCCTCAACACATGCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: TPFLGRDRETGY*GLYPQPQHMQV Trigger: AACCTGCATGTGTTGAGGCTGTGGGTATAAACCCCAGTAACCTGTCTCCCTGTCTCTCCCCAAAAAGGGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | CAGCAAAACAGTATTACAGTAAAAACGACACCCGTGTaGCCGCGGAGGAAGCCCTGCAGCTGTAGGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: QQNSITVKTTPV*PRRKPCSCRKA Trigger: AGCTTTCCTACAGCTGCAGGGCTTCCTCCGCGGCCACACGGGTGTCGTTTTTACTGTAATACTGTTTTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | CTTACCGCGATGGAGGTTCACTTGAACGTGTCTACGTaGGAAAATAACCCTCTACGGAGAGCTGTTGGATGC | + |
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Preference number: 3 (lower is better) Translates to: LTAMEVHLNVST*ENNPLRRAVGC Trigger: GCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGTTCAAGTGAACCTCCATCGCGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| 3UTR-3UTR CAA 90 bp | ACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCTCATGACACAAAGTGTGTTCGGCCCTaGCAGCCTGGCAGGACTCAG | + |
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Preference number: 3 (lower is better) Translates to: TKSANQMNQVSQCPSHDTKCVRP*QPGRTQ Trigger: CTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACTT...TGTGTCATGAGAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| 3UTR GCA 72 bp | CAGGTTACTGGGGTTTATACCCACAGCCTCAACACATaGAGGTTACACATTCTATGGAGCTATATCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: QVTGVYTHSLNT*RLHILWSYILS Trigger: GCTGAGGATATAGCTCCATAGAATGTGTAACCTGCATGTGTTGAGGCTGTGGGTATAAACCCCAGTAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | TCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTaGCTCTTGAGTGCTCATCCTCAGAAGCAAGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SLYSHHHYYRKR*LLSAHPQKQGL Trigger: AAGGCCTTGCTTCTGAGGATGAGCACTCAAGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | TGCCAGCATCTGGGTCCACAGGAGAATCATGGTAGTTaGAAGAAAAGGAATCAACAGGCAGACTTACAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CQHLGPQENHGS*KKRNQQADLQS Trigger: TGACTGTAAGTCTGCCTGTTGATTCCTTTTCTTCCAACTACCATGATTCTCCTGTGGACCCAGATGCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CCA 72 bp | TATTTTAGTACACATTTATTCTTCGCCGTGAGGGAGTaGCAGGGCATCTATTTATGGGCTTGGAGCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: YFSTHLFFAVRE*QGIYLWAWSCL Trigger: GAGACAGCTCCAAGCCCATAAATAGATGCCCTGCCACTCCCTCACGGCGAAGAATAAATGTGTACTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR TCA 72 bp | ACTTCTGCAGGAAGTAGAAAGGCTTCTACAAACGGCTaGGCGGCTTGGTCTCTCAAAGTTCTTCTTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: TSAGSRKASTNG*AAWSLKVLLLK Trigger: TTTTAAAAGAAGAACTTTGAGAGACCAAGCCGCTCAGCCGTTTGTAGAAGCCTTTCTACTTCCTGCAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR GCA 72 bp | AAATGCAAAGGAAGGCACAGCTGGTTACATCGTGTATaGAAGCGGAGTTCAGCATATGTAGAGTTAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KCKGRHSWLHRV*KRSSAYVELKQ Trigger: TTGCTTTAACTCTACATATGCTGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| 3UTR CCA 72 bp | CATGTACATAACACTAAATGCAAAGGAAGGCACAGCTaGTTACATCGTGTATGCAAGCGGAGTTCAGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: HVHNTKCKGRHS*LHRVCKRSSAY Trigger: ATATGCTGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATTTAGTGTTATGTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| 3UTR CCA 72 bp | ACCCACAGCCTCAACACATGCAGGTTACACATTCTATaGAGCTATATCCTCAGCCCTAAAACATTAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: THSLNTCRLHIL*SYILSPKTLGF Trigger: AAAACCTAATGTTTTAGGGCTGAGGATATAGCTCCATAGAATGTGTAACCTGCATGTGTTGAGGCTGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCACATCAAATGCATCCTCATCTAGCCATTTTAAACATTCCAACCTTACGTTTAGTCCCCTTGAGAGTTaGGCTGGTGTGAACTTAACG | + |
|
Preference number: 3 (lower is better) Translates to: CTSNASSSSHFKHSNLTFSPLES*AGVNLT Trigger: CGTTAAGTTCACACCAGCCAAACTCTCAAGGGGACT...AAACGTAAGGTTGGAATGTTTAAAATGGCTAGATGAGGATGCATTTGATGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| 3UTR TCA 72 bp | AGTCTCAAAATTAAATACAAACCTGGAAAGTCCCCTTaGGAGTTTGGCTGGTGTGAACTTAACGGAGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLKIKYKPGKSP*EFGWCELNGAL Trigger: TAAGGCTCCGTTAAGTTCACACCAGCCAAACTCTCAAGGGGACTTTCCAGGTTTGTATTTAATTTTGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| 3UTR TCA 72 bp | ATTTTAAACATTCCAACCTTACGTTTCCTTACGTTCTaGGGCTCTCTTACTCTTCCCTCAGTGGATGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: ILNIPTLRFLTF*GSLTLPSVDAM Trigger: CATAGCATCCACTGAGGGAAGAGTAAGAGAGCCTCAGAACGTAAGGAAACGTAAGGTTGGAATGTTTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| 3UTR TCA 72 bp | TCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATaGACCAGGTTTCACAATGTCCTTCTCATGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SRLSMLRKVQTK*TRFHNVLLMTQ Trigger: CTGTGTCATGAGAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR TCA 90 bp | CACAGCCGGAAGCCATACTCAGCACGTGAAGCCTTCCCTGCGGAGCATCTGAGGACACCACAGGCCTGGTaGTGTGCTTGTCGGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSRKPYSAREAFPAEHLRTPQAW*CACRFY Trigger: ATAAAACCGACAAGCACATCACCAGGCCTGTGGTGT...CCTCAGATGCTCCGCAGGGAAGGCTTCACGTGCTGAGTATGGCTTCCGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR TCA 90 bp | ACGTGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGGGAGGGCTGGGCTGTTaGGGGCGATGGAGCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLREKITLYGELLDAKVGGLGC*GRWSRC Trigger: ACATCGGCTCCATCGCCCTCAACAGCCCAGCCCTCC...CACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATAGCGGCACCGGCATGTaGCCGTTGAGCAGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNSGTGM*PLSSVG Trigger: CCCCACACTGCTCAACGGTCACATGCCGGTGCCGCT...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATTCGGCCCTTGCAGCCTaGCAGGACTCAGTGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNSALAA*QDSVGR Trigger: TCGCCCCACTGAGTCCTGCCAGGCTGCAAGGGCCGA...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAACCTCACTCAGCCTCAGCAGTCAAACACTGATGACGCAAGCATAGAAGGAGGCTCTCCCGGCTaGTCTCTACCGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNLTQPQQSNTDDASIEGGSPG*SLPRED Trigger: ATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCC...TTCTATGCTTGCGTCATCAGTGTTTGACTGCTGAGGCTGAGTGAGGTTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATTTACAGTCGCCGTCCTaGAGCAGGAGGCTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNLQSPS*SRRLSR Trigger: CCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAA...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTAGCGGCACCGGCATGTaGCCGTTGAGCAGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENNPLRRAVGCQGVLQTVSGTGM*PLSSVG Trigger: CCCCACACTGCTCAACGGTCACATGCCGGTGCCGCT...AACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAAAGTGTGTTCGGCCCTTaGAGCCTGGCAGGACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTESCWMPRCPSNSSSQSVFGP*SLAGLS Trigger: ACTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACT...TTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCCGGAAGCCATACTCAGCACGTGAAGCCTTCCCTGCGGAGCATCTGAGGATGGAGACTTGGTTTTaGAGCCCGATGACAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSRKPYSAREAFPAEHLRMETWF*SPMTDS Trigger: TGAATCTGTCATCGGGCTCCAAAACCAAGTCTCCAT...CCTCAGATGCTCCGCAGGGAAGGCTTCACGTGCTGAGTATGGCTTCCGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | ACGTGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGAGTGTGTTCGGCCCTTaGAGCCTGGCAGGACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLREKITLYGELLDAKVSVFGP*SLAGLS Trigger: ACTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACT...CACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAAAGAGAATCCGAGTCATaGCAGGCTGCCTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTESCWMPRCPSNSSSQRESES*QAASRK Trigger: CTTCCTGGAGGCAGCCTGCCATGACTCGGATTCTCT...TTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | AATGCAAAGGAAGGCACAGCTGGTTACATCGTGTATGCAAGCGGAGTTCAGCATCCTGGCAGGACTCAGTaGGGCGACAGGACTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NAKEGTAGYIVYASGVQHPGRTQ*GDRTKA Trigger: AGCCTTAGTCCTGTCGCCCCACTGAGTCCTGCCAGG...ATGCTGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTCCCCTTCTCAGAGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGTCGGCCCTTGCAGCCTaGCAGGACTCAGTGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPLLRVPLFSSSLLPKASALAA*QDSVGR Trigger: TCGCCCCACTGAGTCCTGCCAGGCTGCAAGGGCCGA...CGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACTCTGAGAAGGGGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | TACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAGCTCTGTCCAGACTaGGGAGCGGCACCGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YGELLDAKVSFKQFLSILELCPD*GAAPAC Trigger: ACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCTC...TAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | CTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATAGGGGGACAGCAGAACTaGGGATGGAGCTCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYGELLDAKVSFKQFLSIGGQQN*GWSSVQ Trigger: CTGGACAGAGCTCCATCCCCAGTTCTGCTGTCCCCC...TATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | TACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTATGGAGCCGATGTCGGTaGCGGAGAGCAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YGELLDAKVSFKQFLSILWSRCR*RRATVG Trigger: CCCAACTGTTGCTCTCCGGCACCGACATCGGCTCCA...TAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCACAATGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGCAGCGGTCTCGGATGTaGAAGGCAGGGACACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSQCPSHDTGKLAHGDKLQRSRM*KAGTPQ Trigger: CTGTGGTGTCCCTGCCTTCCACATCCGAGACCGCTG...CAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACATTGTGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTGAGCTCTGTCCAGACTaGGGAGCGGCACCGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AEFLLLKTQKAERLSFSIELCPD*GAAPAC Trigger: ACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCTC...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGGCATCATCCAGGATTTCTGAGAGCTaGGGGACAGCAGAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSHDTGKLAHGDKLASSRISES*GTAELG Trigger: CCCCAGTTCTGCTGTCCCCCAGCTCTCAGAAATCCT...GGATGATGCCAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR TCA 90 bp | TTCACATCCTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGGGAGGGCTGGGCTGTTaGGGGCGATGGAGCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLVTLKTLRKAPPWQGGLGC*GRWSRC Trigger: ACATCGGCTCCATCGCCCTCAACAGCCCAGCCCTCC...CTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAGGATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGGTCCAGCAGATGAGGTaGTCATGTTTCTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLREKITLYGELLDAKVVQQMR*SCFWSS Trigger: GCTGGACCAGAAACATGAGCACCTCATCTGCTGGAC...CACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCAGAGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTGGCTCTCGAGTCATGGCAGGCTaGCTCCAGGAAGAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSQSPFILIIITTESGGSRVMAG*LQEEAS Trigger: AGAAGCCTCTTCCTGGAGGCAGCCTGCCATGACTCG...AGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACTCTGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | CCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAAAGGTGCTCATGTTTCTaGTCCAGCAGCAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTESCWMPRCPSNSSSQRCSCF*SSSKCK Trigger: CTTGCACTTGCTGCTGGACCAGAAACATGAGCACCT...TTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR TCA 90 bp | CTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCTCGATGTCCAGCAGATaGGGTGCTCATGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LREKITLYGELLDAKVSFSMSSR*GAHVSG Trigger: ACCAGAAACATGAGCACCTCATCTGCTGGACATCGA...GAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR TCA 90 bp | CTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACGGAGGCTCTCCCGGCTaGTCTCTACCGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LISYIENIKKGSSLAVFNGGSPG*SLPRED Trigger: ATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCC...GTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTGGGAGCCTACGTTCCGGCTGAATTTCTCCTGTTAAAAACACAGAAGTGGTCCAGCAGCAAGTaGAAGAGGAACTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLGAYVPAEFLLLKTQKWSSSK*KRNCHS Trigger: GCTGTGGCAGTTCCTCTTGCACTTGCTGCTGGACCA...CTTCTGTGTTTTTAACAGGAGAAATTCAGCCGGAACGTAGGCTCCCAAGAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | CTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACTTACAGTCGCCGTCCTaGAGCAGGAGGCTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LISYIENIKKGSSLAVFNLQSPS*SRRLSR Trigger: CCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAA...GTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | ACGTGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGAGGTGCTCATGTTTCTaGTCCAGCAGCAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCLREKITLYGELLDAKVRCSCF*SSSKCK Trigger: CTTGCACTTGCTGCTGGACCAGAAACATGAGCACCT...CACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAAATGGGGGACAGCAGAACTaGGGATGGAGCTCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCQGVLQTVPLNTRNGGQQN*GWSSVQ Trigger: CTGGACAGAGCTCCATCCCCAGTTCTGCTGTCCCCC...ATTTCTAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGACAGGCCTGGTGATGTaGTTGTCGGTTTTATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLREKITLYGELLDAKVTGLVM*LSVLLV Trigger: GACCAATAAAACCGACAAGCACATCACCAGGCCTGT...CACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | ACTAAATGCAAAGGAAGGCACAGCTGGTTACATCGTGTATGCAAGCGGAGTTCATCCACTTGGTGTCTGTaGGGTGAAGAAGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKCKGRHSWLHRVCKRSSSTWCL*GEEGWS Trigger: ACTCCAGCCTTCTTCACCGCACAGACACCAAGTGGA...TGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAAATGGCCTTGAAGGCCTCTaGAGCGTTCTGCAGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCQGVLQTVPLNTRNGLEGL*SVLQGV Trigger: AACTCCCTGCAGAACGCTCCAGAGGCCTTCAAGGCC...ATTTCTAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTCATGGGAACATTTCCAACCAGCGTTTATAGTTTAAAGGTCGACAGAAGGCAGCAGAACTGGGGATaGAGCTCTGTCCAGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVMGTFPTSVYSLKVDRRQQNWG*SSVQTG Trigger: CCCAGTCTGGACAGAGCTCCATCCCCAGTTCTGCTG...CCTTCTGTCGACCTTTAAACTATAAACGCTGGTTGGAAATGTTCCCATGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAAATAGAGGAGATCTTGGCTaGGACAGACGAGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCQGVLQTVPLNTRNRGDLG*DRRGQE Trigger: TTCCTGGCCTCGTCTGTCTCAGCCAAGATCTCCTCT...ATTTCTAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR TCA 90 bp | ACATCCTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTGGTTTTGGAGCCCGATaGCAGATTCAGGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLVTLKTLRKAPPWQCGFGAR*QIQGLQ Trigger: CTGGAGCCCCTGAATCTGTCATCGGGCTCCAAAACC...ACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | GAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTGTGACGCAGACGAAATaGTGGCAGCATTTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ENNPLRRAVGCQGVLQTVVTQTK*WQHLAT Trigger: TGTTGCCAAATGCTGCCAGCATTTCGTCTGCGTCAC...AACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTCCGGAGAGCAACAGTTaGGGTGCAGAGATTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLLLKTQKAERLSFSIPESNS*GAEISK Trigger: CTTGGAAATCTCTGCACCCCAACTGTTGCTCTCCGG...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTGGGAGCCTACGTTCCGGCTGAATTTCTCCTGTTAAAAACACAGAAGTTAAAGAGGAGATCTTaGCTGAGACAGACGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLLGAYVPAEFLLLKTQKLKRRS*LRQTRP Trigger: TGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAA...CTTCTGTGTTTTTAACAGGAGAAATTCAGCCGGAACGTAGGCTCCCAAGAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAGAGTCCCTTTATTCTCATCATCATTACTACCGAAAGCGGTGGCTCTGAAGAGATGGAGACTTaGTTTTGGAGCCCGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSQSPFILIIITTESGGSEEMET*FWSPMT Trigger: TGTCATCGGGCTCCAAAACCAAGTCTCCATCTCTTC...AGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATAAAGGGACTCTGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR CCA 90 bp | ATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTCCTGGCAGGACTCAGTaGGGCGACAGGACTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIHVTKSANQMNQVSQCPPGRTQ*GDRTKA Trigger: AGCCTTAGTCCTGTCGCCCCACTGAGTCCTGCCAGG...AGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
||
| 3UTR CAA 72 bp | TGTCTACGTGAGAAAATAACCCTCTACGGAGAGCTGTaGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLREKITLYGEL*DAKVSFKQFLS Trigger: TGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| 3UTR CAA 72 bp | TATTCTCATCATCATTACTACCGAAAGCGGTGGCTCTaGAGTGCTCATCCTCAGAAGCAAGGCCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSHHHYYRKRWL*SAHPQKQGLQF Trigger: GAACTGAAGGCCTTGCTTCTGAGGATGAGCACTCAAGAGCCACCGCTTTCGGTAGTAATGATGATGAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | TATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCTGGTCCAGCAGCAAGTaGAAGAGGAACTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPCYEKCKPNEPGFTMSFWSSSK*KRNCHS Trigger: GCTGTGGCAGTTCCTCTTGCACTTGCTGCTGGACCA...GAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS-3UTR GCA 90 bp | ACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCTCATGACACAGTCCAGCAGATGAGGTaGTCATGTTTCTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKSANQMNQVSQCPSHDTVQQMR*SCFWSS Trigger: GCTGGACCAGAAACATGAGCACCTCATCTGCTGGAC...TGTGTCATGAGAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | GCTAACATACATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCATGGAGCCGATGTCGGTaGCGGAGAGCAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ANIHLDYPCYEKCKPNEPWSRCR*RRATVG Trigger: CCCAACTGTTGCTCTCCGGCACCGACATCGGCTCCA...TGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATGTATGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR GCA 90 bp | ACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCTCATGACACAAAGTGCAAGAGGAACTaGCACAGCGTGATTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSANQMNQVSQCPSHDTKCKRN*HSVIAL Trigger: GAGTGCAATCACGCTGTGGCAGTTCCTCTTGCACTT...TGTGTCATGAGAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR CCA 90 bp | GCTAACATACATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGCCTTGAAGGCCTCTaGAGCGTTCTGCAGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ANIHLDYPCYEKCKPNEPGLEGL*SVLQGV Trigger: AACTCCCTGCAGAACGCTCCAGAGGCCTTCAAGGCC...TGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATGTATGTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | TGCACATCAAATGCATCCTCATCTAGCCATTTTAAACATTCCAACCTTACGTTTAGGATTTCTGAGAGCTaGGGGACAGCAGAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTSNASSSSHFKHSNLTFRISES*GTAELG Trigger: CCCCAGTTCTGCTGTCCCCCAGCTCTCAGAAATCCT...AAACGTAAGGTTGGAATGTTTAAAATGGCTAGATGAGGATGCATTTGATGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR GCA 90 bp | TGTATGCAAGCGGAGTTCAGCATATGTAGAGTTAAAGCAATAAAAGGCTTCACAAAGTGCAAGAGGAACTaGCACAGCGTGATTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CMQAEFSICRVKAIKGFTKCKRN*HSVIAL Trigger: GAGTGCAATCACGCTGTGGCAGTTCCTCTTGCACTT...TGTGAAGCCTTTTATTGCTTTAACTCTACATATGCTGAACTCCGCTTGCATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | CATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAGTCCAGCAGATGAGGTaGTCATGTTTCTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLDYPCYEKCKPNEPGFTVQQMR*SCFWSS Trigger: GCTGGACCAGAAACATGAGCACCTCATCTGCTGGAC...TGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR GCA 90 bp | CATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACATCCACTTGGTGTCTGTaGGGTGAAGAAGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLDYPCYEKCKPNEPGFTSTWCL*GEEGWS Trigger: ACTCCAGCCTTCTTCACCGCACAGACACCAAGTGGA...TGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CCA 90 bp | ATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTCCGGAGAGCAACAGTTaGGGTGCAGAGATTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIHVTKSANQMNQVSQCPPESNS*GAEISK Trigger: CTTGGAAATCTCTGCACCCCAACTGTTGCTCTCCGG...AGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR TCA 90 bp | TTGAATTCACCATCTGTAAGCATCTTCCAAAACATTCTTAGTTTGTTTCCCACCTCGATGTCCAGCAGATaGGGTGCTCATGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSPSVSIFQNILSLFPTSMSSR*GAHVSG Trigger: ACCAGAAACATGAGCACCTCATCTGCTGGACATCGA...GGTGGGAAACAAACTAAGAATGTTTTGGAAGATGCTTACAGATGGTGAATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR TCA 90 bp | CATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACATCGATGTCCAGCAGATaGGGTGCTCATGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLDYPCYEKCKPNEPGFTSMSSR*GAHVSG Trigger: ACCAGAAACATGAGCACCTCATCTGCTGGACATCGA...TGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS-3UTR GCA 90 bp | CATCTAGATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAAAGTGCAAGAGGAACTaGCACAGCGTGATTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HLDYPCYEKCKPNEPGFTKCKRN*HSVIAL Trigger: GAGTGCAATCACGCTGTGGCAGTTCCTCTTGCACTT...TGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAATCTAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS-3UTR CCA 90 bp | ACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCTCATGACACAACGCAGACGAAATGCTaGCAGCATTTGGCAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: TKSANQMNQVSQCPSHDTTQTKC*QHLATL Trigger: TAATGTTGCCAAATGCTGCCAGCATTTCGTCTGCGT...TGTGTCATGAGAAGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR CCA 90 bp | AGGTTACACATTCTATGGAGCTATATCCTCAGCCCTAAAACATTAGGTTTTAAAAGGTGCTCATGTTTCTaGTCCAGCAGCAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLHILWSYILSPKTLGFKRCSCF*SSSKCK Trigger: CTTGCACTTGCTGCTGGACCAGAAACATGAGCACCT...TTTAAAACCTAATGTTTTAGGGCTGAGGATATAGCTCCATAGAATGTGTAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| 3UTR CAA 72 bp | AAAGCAATAAAAGGCTTCACATCCTCATTAGTTACATaGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAIKGFTSSLVT*KTLRKAPPWQC Trigger: ACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAGGATGTGAAGCCTTTTATTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS TCA 90 bp | TCCACTTGGTGTCTGTGCGGTGAAGAAGGCTGGAGTGAGGGATCCTaGGGGGAGGGCTGGGCTGTTGAGGGCGATGGAGCCGATGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: STWCLCGEEGWSEGS*GEGWAVEGDGADVG Trigger: ACCGACATCGGCTCCATCGCCCTCAACAGCCCAGCCCTCCCCTCAGGATCCCTCACTCCAGCCTTCTTCACCGCACAGACACCAAGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS GCA 90 bp | TGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTaGCTGTGGACCTCTCGGCCTTCCGGGGACACCTTACAGTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WRYSLRLALLREDKP*LWTSRPSGDTLQSP Trigger: CGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CCA 90 bp | TACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTaGACCTCTCGGCCTTCCGGGGACACCTTACAGTCGCCGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YSLRLALLREDKPCL*TSRPSGDTLQSPSC Trigger: GCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTCCAGACTGGGGAGCGGCACCGGCATGTGACCGTTGAGCAGTGTGGGGCCACTTCTTCCGCCTaGAGGAGCTTGAACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVQTGERHRHVTVEQCGATSSA*RSLNSP Trigger: TGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGC...CCCACACTGCTCAACGGTCACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGTCCAGACTGGGGAGCGGCACCGGCATGTGACCGTTGAGCAGTGTGGGTCCGTCTTGATGGCCTaGAAGGCCTCTGGAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVQTGERHRHVTVEQCGSVLMA*KASGAF Trigger: GAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGA...CCCACACTGCTCAACGGTCACATGCCGGTGCCGCTCCCCAGTCTGGACAGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129827.8 |
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| CDS TCA 90 bp | GGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTaGTCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTPYSRRPAAGGSPG*SLPREDPFSGYPGK Trigger: CTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAACGGAGGCCCCACAGCTaGGCCACTTCTTCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTESCWMPRCPSNSSSQRRPHS*ATSSAL Trigger: CAAGGCGGAAGAAGTGGCCAAGCTGTGGGGCCTCCG...TTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS TCA 90 bp | TCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTaGGGATCCATTTTCAGGATATCCGGGAAAGAGACGAACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSCSRRLSRLISTA*GSIFRISGKETNLY Trigger: GTACAAGTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CCA 90 bp | CAGACGAAATGCTGGCAGCATTTGGCAACATTAAAGAGGAGATCTTaGCTGAGACAGACGAGGCCAGGAAAGCGGATGCCGCTGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTKCWQHLATLKRRS*LRQTRPGKRMPLPQ Trigger: CTGCGGCAGCGGCATCCGCTTTCCTGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTTCGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR CAA 90 bp | GAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTGGGAGGGCTGGGCTGTaGAGGGCGATGGAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: ENNPLRRAVGCQGVLQTVGRAGL*RAMEPM Trigger: CATCGGCTCCATCGCCCTCAACAGCCCAGCCCTCCC...AACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | GTTTCACAATGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGGGGAGGGCTGGGCTGTaGAGGGCGATGGAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSQCPSHDTGKLAHGDKLGRAGL*RAMEPM Trigger: CATCGGCTCCATCGCCCTCAACAGCCCAGCCCTCCC...CAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACATTGTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAAAAGTGTGTTCGGCCCTaGCAGCCTGGCAGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSTESCWMPRCPSNSSSQKCVRP*QPGRTQ Trigger: CTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACTT...TTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
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| CDS GCA 90 bp | TTGAGGAGCTTGAACTCGCCATCGTTCGATGTCCAGCAGATGAGGTaGTCATGTTTCTGGTCCAGCAGCAAGTGCAAGAGGAACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRSLNSPSFDVQQMR*SCFWSSSKCKRNCH Trigger: GTGGCAGTTCCTCTTGCACTTGCTGCTGGACCAGAAACATGAGCACCTCATCTGCTGGACATCGAACGATGGCGAGTTCAAGCTCCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS-3UTR CAA 90 bp | CTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCGCCACTTCTTCCGCCTaGAGGAGCTTGAACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LREKITLYGELLDAKVSFATSSA*RSLNSP Trigger: TGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGC...GAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGGCATCATCCTCCGTCTTGATGGCCTaGAAGGCCTCTGGAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPSHDTGKLAHGDKLASSSVLMA*KASGAF Trigger: GAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGA...GGATGATGCCAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CCA 90 bp | ACAGGGATGGGGACCGAGATGAAGAGGGTGACGCAGACGAAATGCTaGCAGCATTTGGCAACATTAAAGAGGAGATCTTGGCTGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: TGMGTEMKRVTQTKC*QHLATLKRRSWLRQ Trigger: CTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTTCGTCTGCGTCACCCTCTTCATCTCGGTCCCCATCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CAA 90 bp | CTACGTGAGAAAATAACCCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCTCCAGCTTCTCCGTCTaGATGGCCTTGAAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LREKITLYGELLDAKVSFSSFSV*MALKAS Trigger: AGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTGGA...GAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGGGTTATTTTCTCACGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTACGGAGAGCTGTTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATGCCGGAGAGCAACAGTaGGGGTGCAGAGATTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLRRAVGCQGVLQTVPLNAGEQQ*GCRDFQ Trigger: TTGGAAATCTCTGCACCCCAACTGTTGCTCTCCGGC...ATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAACAGCTCTCCGTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAATGCAAAGGAAGGCACAGCTGGTTACATCGTGTATGCAAGCGGAGTTCAGCCACTTCTTCCGCCTaGAGGAGCTTGAACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKCKGRHSWLHRVCKRSSATSSA*RSLNSP Trigger: TGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGC...TGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGCATTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTAGTTACATTGAAAACATTAAGAAAGGCTCCTCCCTGGCAGTGTTCAACCGGAGGCCCCACAGCTaGGCCACTTCTTCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LISYIENIKKGSSLAVFNRRPHS*ATSSAL Trigger: CAAGGCGGAAGAAGTGGCCAAGCTGTGGGGCCTCCG...GTTGAACACTGCCAGGGAGGAGCCTTTCTTAATGTTTTCAATGTAACTAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAACCTCACTCAGCCTCAGCAGTCAAACACTGATGACGCAAGCATAGAAGATGGAGACTTGGTTTaGGAGCCCGATGACAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSNLTQPQQSNTDDASIEDGDLV*EPDDRF Trigger: GAATCTGTCATCGGGCTCCAAAACCAAGTCTCCATC...TTCTATGCTTGCGTCATCAGTGTTTGACTGCTGAGGCTGAGTGAGGTTGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTGGAAGAGATGGAGACTaGGTTTTGGAGCCCGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AEFLLLKTQKAERLSFSIGRDGD*VLEPDD Trigger: GTCATCGGGCTCCAAAACCAAGTCTCCATCTCTTCC...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTGGCCTGGTGATGTGCTaGTCGGTTTTATTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AEFLLLKTQKAERLSFSIGLVMC*SVLLVT Trigger: TGTGACCAATAAAACCGACAAGCACATCACCAGGCC...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTATTAAAGAGGAGATCTaGGCTGAGACAGACGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEFLLLKTQKAERLSFSIIKEEI*AETDEA Trigger: GGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAAT...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR CAA 90 bp | TTGGATGCCAAGGTGTCCTTCAAACAGTTCCTCTCAATACTAGAAATACATAAAAAGTGTGTTCGGCCCTaGCAGCCTGGCAGGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: LDAKVSFKQFLSILEIHKKCVRP*QPGRTQ Trigger: CTGAGTCCTGCCAGGCTGCAAGGGCCGAACACACTT...TTTATGTATTTCTAGTATTGAGAGGAACTGTTTGAAGGACACCTTGGCATCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000151153.2 |
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| CDS-3UTR CAA 90 bp | TGTATGCAAGCGGAGTTCAGCATATGTAGAGTTAAAGCAATAAAAGGCTTCACAGCCGGAGAGCAACAGTaGGGGTGCAGAGATTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: CMQAEFSICRVKAIKGFTAGEQQ*GCRDFQ Trigger: TTGGAAATCTCTGCACCCCAACTGTTGCTCTCCGGC...TGTGAAGCCTTTTATTGCTTTAACTCTACATATGCTGAACTCCGCTTGCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | ATTATCCATGTTACGAAAAGTGCAAACCAAATGAACCAGGTTTCACAATGTCCTTCCAGCTTCTCCGTCTaGATGGCCTTGAAGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: IIHVTKSANQMNQVSQCPSSFSV*MALKAS Trigger: AGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTGGA...AGGACATTGTGAAACCTGGTTCATTTGGTTTGCACTTTTCGTAACATGGATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS-3UTR CAA 90 bp | GTTTCACAATGTCCTTCTCATGACACAGGTAAACTAGCCCATGGGGACAAACTGTGCTTGTCGGTTTTATaGGTCACAAACCTGATCACA | + |
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Preference number: 5 (lower is better) Translates to: VSQCPSHDTGKLAHGDKLCLSVL*VTNLIT Trigger: TGTGATCAGGTTTGTGACCAATAAAACCGACAAGCA...CAGTTTGTCCCCATGGGCTAGTTTACCTGTGTCATGAGAAGGACATTGTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS-3UTR CAA 90 bp | GCTGAATTTCTCCTGTTAAAAACACAGAAGGCAGAGAGGCTGTCGTTCTCCATTAAATGCTGGCAGCATTaGGCAACATTAAAGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: AEFLLLKTQKAERLSFSIKCWQH*ATLKRR Trigger: TCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTT...AATGGAGAACGACAGCCTCTCTGCCTTCTGTGTTTTTAACAGGAGAAATTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS GCA 72 bp | TCTCGGCCTTCCGGGGACACCTTACAGTCGCCGTCCTaGAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRPSGDTLQSPS*SRRLSRLISTA Trigger: CGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS TCA 72 bp | GGCCCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTaGGAGAGGACAAGCCGTGCCTGTGGACCTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GPSGGTRCGWHF*ERTSRACGPLG Trigger: GCCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CAA 72 bp | AGGCCCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTaGAGAGAGGACAAGCCGTGCCTGTGGACCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RPEWRYSLRLAL*REDKPCLWTSR Trigger: CCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS GCA 72 bp | TCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTaGCTGTGGACCTCTCGGCCTTCCGGGGACACCTTA | + |
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Preference number: 6 (lower is better) Translates to: SLRLALLREDKP*LWTSRPSGDTL Trigger: TAAGGTGTCCCCGGAAGGCCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CAA 72 bp | TTGCGGAGGCCCCACAGCTTGGCCACTTCTTCCGCCTaGAGGAGCTTGAACTCGCCATCGTTCGATGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRRPHSLATSSA*RSLNSPSFDVQ Trigger: CTGGACATCGAACGATGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGCCAAGCTGTGGGGCCTCCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS CAA 90 bp | TCCACAGGGGGACTGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTaGATGGCCTTGAAGGCCTCTGGAGCGTTCTGCAGGGAGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: STGGLSSQGSSSFSV*MALKASGAFCRELM Trigger: CATCAACTCCCTGCAGAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGATGACAGTCCCCCTGTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CAA 90 bp | TTGCGGAGGCCCCACAGCTTGGCCACTTCTTCCGCCTTGAGGAGCTaGAACTCGCCATCGTTCGATGTCCAGCAGATGAGGTGCTCATGT | + |
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Preference number: 6 (lower is better) Translates to: LRRPHSLATSSALRS*NSPSFDVQQMRCSC Trigger: ACATGAGCACCTCATCTGCTGGACATCGAACGATGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGCCAAGCTGTGGGGCCTCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS CAA 72 bp | TCACAGGGCTCCTCCAGCTTCTCCGTCTTGATGGCCTaGAAGGCCTCTGGAGCGTTCTGCAGGGAGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: SQGSSSFSVLMA*KASGAFCRELM Trigger: CATCAACTCCCTGCAGAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS TCA 72 bp | TGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTaGGGATCCATTTTCAGGATATCCGGGAAAGAGACG | + |
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Preference number: 6 (lower is better) Translates to: CSRRLSRLISTA*GSIFRISGKET Trigger: CGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS TCA 72 bp | TACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTaGTCTCTACCGCGTGAGGATCCATTTTCAGGATAT | + |
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Preference number: 6 (lower is better) Translates to: YSRRPAAGGSPG*SLPREDPFSGY Trigger: ATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 |
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| CDS CAA 90 bp | GCAGACGAAATGCTGGCAGCATTTGGCAACATTAAAGAGGAGATCTaGGCTGAGACAGACGAGGCCAGGAAAGCGGATGCCGCTGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: ADEMLAAFGNIKEEI*AETDEARKADAAAA Trigger: TGCGGCAGCGGCATCCGCTTTCCTGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTTCGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CCA 72 bp | GATGACAGATTCAGGGGCTCCAGAGAATCCGAGTCATaGCAGGCTGCCTCCAGGAAGAGGCTTCTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: DDRFRGSRESES*QAASRKRLLCS Trigger: TGAACACAGAAGCCTCTTCCTGGAGGCAGCCTGCCATGACTCGGATTCTCTGGAGCCCCTGAATCTGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CCA 72 bp | TCGTTCGATGTCCAGCAGATGAGGTGCTCATGTTTCTaGTCCAGCAGCAAGTGCAAGAGGAACTGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SFDVQQMRCSCF*SSSKCKRNCHS Trigger: GCTGTGGCAGTTCCTCTTGCACTTGCTGCTGGACCAGAAACATGAGCACCTCATCTGCTGGACATCGAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS CCA 72 bp | TGCTGGCAGCATTTGGCAACATTAAAGAGGAGATCTTaGCTGAGACAGACGAGGCCAGGAAAGCGGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: CWQHLATLKRRS*LRQTRPGKRMP Trigger: CGGCATCCGCTTTCCTGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CAA 90 bp | GAAGGCAGGGACACCACAGGCCTGGTGATGTGCTTGTCGGTTTTATaGGTCACAAACCTGATCACAGTCCTGACTTCTTCCACAGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: EGRDTTGLVMCLSVL*VTNLITVLTSSTGG Trigger: TCCCCCTGTGGAAGAAGTCAGGACTGTGATCAGGTTTGTGACCAATAAAACCGACAAGCACATCACCAGGCCTGTGGTGTCCCTGCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CAA 90 bp | GGGACCGAGATGAAGAGGGTGACGCAGACGAAATGCTGGCAGCATTaGGCAACATTAAAGAGGAGATCTTGGCTGAGACAGACGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GTEMKRVTQTKCWQH*ATLKRRSWLRQTRP Trigger: TGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTTCGTCTGCGTCACCCTCTTCATCTCGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS GCA 72 bp | TTGAACTCGCCATCGTTCGATGTCCAGCAGATGAGGTaGTCATGTTTCTGGTCCAGCAGCAAGTGCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LNSPSFDVQQMR*SCFWSSSKCKR Trigger: CCTCTTGCACTTGCTGCTGGACCAGAAACATGAGCACCTCATCTGCTGGACATCGAACGATGGCGAGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008542.12 ENSMUST00000129827.8 ENSMUST00000151153.2 |
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| CDS CAA 72 bp | ATGCTGGCAGCATTTGGCAACATTAAAGAGGAGATCTaGGCTGAGACAGACGAGGCCAGGAAAGCGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: MLAAFGNIKEEI*AETDEARKADA Trigger: GGCATCCGCTTTCCTGGCCTCGTCTGTCTCAGCCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CCA 72 bp | GGGACCGAGATGAAGAGGGTGACGCAGACGAAATGCTaGCAGCATTTGGCAACATTAAAGAGGAGATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GTEMKRVTQTKC*QHLATLKRRSW Trigger: CCAAGATCTCCTCTTTAATGTTGCCAAATGCTGCCAGCATTTCGTCTGCGTCACCCTCTTCATCTCGGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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| CDS CAA 72 bp | GACACCACAGGCCTGGTGATGTGCTTGTCGGTTTTATaGGTCACAAACCTGATCACAGTCCTGACTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DTTGLVMCLSVL*VTNLITVLTSS Trigger: GGAAGAAGTCAGGACTGTGATCAGGTTTGTGACCAATAAAACCGACAAGCACATCACCAGGCCTGTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008542.12 |
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