Pregenerated sensors for ELF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027186Ensembl transcript IDs: ENSMUST00000028609.14, ENSMUST00000126290.2, ENSMUST00000164172.8, ENSMUST00000171693.8, ENSMUST00000239273.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACTAACCACAGGCAAGCTGCCTCAGTCGACCGCTCAGAACCCCTaGAACGGGAGGATCGTGTGTCTTAATGGTGCAACGGGTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KLTTGKLPQSTAQNP*NGRIVCLNGATGPL Trigger: AAGAGGACCCGTTGCACCATTAAGACACACGATCCTCCCGTTCCAGGGGTTCTGAGCGGTCGACTGAGGCAGCTTGCCTGTGGTTAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 90 bp | GGGGAGGAGGGGGAGGAGGGAGACTTTCAAATGTCTAGTTTGATCTaGTTGTTTCCAACAACAGAAATCCATCAAATGAGCCTGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GEEGEEGDFQMSSLI*LFPTTEIHQMSLVS Trigger: GGACACCAGGCTCATTTGATGGATTTCTGTTGTTGGAAACAATCAGATCAAACTAGACATTTGAAAGTCTCCCTCCTCCCCCTCCTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 90 bp | GGTTTTGAAGAGGAGGAGGGAGACTTTCAAATGTCTAGTTTGATCTaGTTGTTTCCAACAACAGAAATCCATCAAATGAGCCTGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GFEEEEGDFQMSSLI*LFPTTEIHQMSLVS Trigger: GGACACCAGGCTCATTTGATGGATTTCTGTTGTTGGAAACAATCAGATCAAACTAGACATTTGAAAGTCTCCCTCCTCCTCTTCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171693.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCCTCCCCCTTGGGATaGAGACGATTGCTTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSSPLG*RRLLKG Trigger: GCCCTTAAGCAATCGTCTTCATCCCAAGGGGGAGGA...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCCAACGGGTCCTCTTGTaGAACAGCACCCATAACACT | + |
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Preference number: 2 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLQRVLL*NSTHNT Trigger: AGTGTTATGGGTGCTGTTTCACAAGAGGACCCGTTG...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCGGCACTCCACCATGTTaGAGGTCATTAACACCTTGC | + |
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Preference number: 2 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLGTPPC*RSLTPC Trigger: GCAAGGTGTTAATGACCTGCAACATGGTGGAGTGCC...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGGCACTCCACCATGTTaGAGGTCATTAACACCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RSSACIAIQCRSLDSPNSGTPPC*RSLTPC Trigger: GCAAGGTGTTAATGACCTGCAACATGGTGGAGTGCC...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR CAA 90 bp | CCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTaGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGAAGACGATT | + |
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Preference number: 2 (lower is better) Translates to: PLAPNTSLRRQCHTK*PQDHPFLPLGMKTI Trigger: AATCGTCTTCATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACATCCTCCCCCTTGGGATaGAGACGATTGCTTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SLSSKHFIKETVSHQVATSSPLG*RRLLKG Trigger: GCCCTTAAGCAATCGTCTTCATCCCAAGGGGGAGGA...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGTCCTCCCCCTTGGGATaGAGACGATTGCTTAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: CETAPITLAPLAPNTSLRSSPLG*RRLLKG Trigger: GCCCTTAAGCAATCGTCTTCATCCCAAGGGGGAGGA...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCACAACGGGTCCTCTTGTaGAACAGCACCCATAACACT | + |
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Preference number: 2 (lower is better) Translates to: MPTACNGRQGNVSADFNPQRVLL*NSTHNT Trigger: AGTGTTATGGGTGCTGTTTCACAAGAGGACCCGTTG...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTTGGGATGAAGACGATTaGTTAAGGGCTGATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RSSACIAIQCRSLDSPNSWDEDD*LRADGI Trigger: GATGCCATCAGCCCTTAAGCAATCGTCTTCATCCCA...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGTGACTGTGGCTAAGTaGTTGGAAATGGTGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: RSSACIAIQCRSLDSPNSVTVAK*LEMVIW Trigger: CCAGATCACCATTTCCAACCACTTAGCCACAGTCAC...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCATGGGATGAAGACGATTaGTTAAGGGCTGATGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: MPTACNGRQGNVSADFNPWDEDD*LRADGI Trigger: GATGCCATCAGCCCTTAAGCAATCGTCTTCATCCCA...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCCCCATGAACGTTGATTaGTGTAAATTCACTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLPMNVD*CKFTVF Trigger: AAAGACAGTGAATTTACATCAATCAACGTTCATGGG...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCCCATGAACGTTGATTaGTGTAAATTCACTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RSSACIAIQCRSLDSPNSPMNVD*CKFTVF Trigger: AAAGACAGTGAATTTACATCAATCAACGTTCATGGG...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR CCA 72 bp | ACAGGCAAGCTGCCTCAGTCGACCGCTCAGAACCCCTaGAACGGGAGGATCGTGTGTCTTAATGGTGCAACG | + |
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Preference number: 3 (lower is better) Translates to: TGKLPQSTAQNP*NGRIVCLNGAT Trigger: CGTTGCACCATTAAGACACACGATCCTCCCGTTCCAGGGGTTCTGAGCGGTCGACTGAGGCAGCTTGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR GCA 72 bp | AGACCATCCCTTCCTCCCCCTTGGGATGAAGACGATTaGTTAAGGGCTGATGGCATCGCCCCAATAGACAAC | + |
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Preference number: 3 (lower is better) Translates to: RPSLPPPWDEDD*LRADGIAPIDN Trigger: GTTGTCTATTGGGGCGATGCCATCAGCCCTTAAGCAATCGTCTTCATCCCAAGGGGGAGGAAGGGATGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR GCA 72 bp | TCTGGGGAAGTTAGGGTTCAGGGCACTCCACCATGTTaGAGGTCATTAACACCTTGCATGCCAACGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: SGEVRVQGTPPC*RSLTPCMPTAC Trigger: GCATGCCGTTGGCATGCAAGGTGTTAATGACCTGCAACATGGTGGAGTGCCCTGAACCCTAACTTCCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR CCA 72 bp | CACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTaGGATGAAGACGATTGCTTAAGGGCTGATGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: HQVATRPSLPPP*DEDDCLRADGI Trigger: GATGCCATCAGCCCTTAAGCAATCGTCTTCATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCCAGTGTCACACCAAGTaGCCACAAGACCATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLQCHTK*PQDHPF Trigger: GAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTG...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCGGGCACTCCACCATGTaGCAGGTCATTAACACCTTG | + |
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Preference number: 3 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLGHSTM*QVINTL Trigger: CAAGGTGTTAATGACCTGCAACATGGTGGAGTGCCC...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 72 bp | GGATCGTGTGTCTTAATGGTGCAACGGGTCCTCTTGTaGAACAGCACCCATAACACTGGCTCCCTTAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GSCVLMVQRVLL*NSTHNTGSLSS Trigger: GGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACAAGAGGACCCGTTGCACCATTAAGACACACGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCAGTGTCACACCAAGTaGCCACAAGACCATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSSACIAIQCRSLDSPNSQCHTK*PQDHPF Trigger: GAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTG...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCACAGTGTCACACCAAGTaGCCACAAGACCATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: MPTACNGRQGNVSADFNPQCHTK*PQDHPF Trigger: GAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTG...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTACTGTGGCTAAGTGGTaGGAAATGGTGATCTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: RSSACIAIQCRSLDSPNSTVAKW*EMVIWL Trigger: TAACCAGATCACCATTTCCAACCACTTAGCCACAGT...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR GCA 72 bp | TGTTGCAGGTCATTAACACCTTGCATGCCAACGGCATaGAACGGCAGACAAGGAAATGTCAGTGCAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: CCRSLTPCMPTA*NGRQGNVSADF Trigger: AAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCATGCAAGGTGTTAATGACCTGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR CCA 72 bp | GAAGGATTGGCCGTGGATCAAGTGACTGTGGCTAAGTaGTTGGAAATGGTGATCTGGTTAAGAGACTTATTA | + |
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Preference number: 3 (lower is better) Translates to: EGLAVDQVTVAK*LEMVIWLRDLL Trigger: TAATAAGTCTCTTAACCAGATCACCATTTCCAACCACTTAGCCACAGTCACTTGATCCACGGCCAATCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 72 bp | CACAGCAGTGATTTAGAAATTAATGCACATGTCTGTTaGTCAGGTCACTGTAGACCTGATGATAGCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: HSSDLEINAHVC*SGHCRPDDSHQ Trigger: CTGGTGGCTATCATCAGGTCTACAGTGACCTGATCAACAGACATGTGCATTAATTTCTAAATCACTGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 72 bp | GGGGAGGAGGGAGACTTTCAAATGTCTAGTTTGATCTaGTTGTTTCCAACAACAGAAATCCATCAAATGAGC | + |
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Preference number: 3 (lower is better) Translates to: GEEGDFQMSSLI*LFPTTEIHQMS Trigger: GCTCATTTGATGGATTTCTGTTGTTGGAAACAATCAGATCAAACTAGACATTTGAAAGTCTCCCTCCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR TCA 72 bp | GAGGAGGAGGGAGACTTTCAAATGTCTAGTTTGATCTaGTTGTTTCCAACAACAGAAATCCATCAAATGAGC | + |
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Preference number: 3 (lower is better) Translates to: EEEGDFQMSSLI*LFPTTEIHQMS Trigger: GCTCATTTGATGGATTTCTGTTGTTGGAAACAATCAGATCAAACTAGACATTTGAAAGTCTCCCTCCTCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171693.8 |
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| CDS-3UTR GCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGGTCATGCTGCAGAGCTaGAGGCCGCTGATGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMVMLQS*RPLMLK Trigger: CTTCAACATCAGCGGCCTGCAGCTCTGCAGCATGAC...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGCCCAGACATGGCGCTTaGTCCAGTATTCAGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMPRHGA*SSIQGA Trigger: TGCACCCTGAATACTGGACCAAGCGCCATGTCTGGG...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGGGCAGGAAGGTGCTATaGGTTACGGAGTCCAACATC | + |
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Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMGRKVL*VTESNI Trigger: GATGTTGGACTCCGTAACCCATAGCACCTTCCTGCC...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCCCAGACATGGCGCTTaGTCCAGTATTCAGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSPRHGA*SSIQGA Trigger: TGCACCCTGAATACTGGACCAAGCGCCATGTCTGGG...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGGTCGCAGCAGAATTaGAGCCATTCCCAGACATGG | + |
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Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLWSQQN*SHSQTW Trigger: CCATGTCTGGGAATGGCTCCAATTCTGCTGCGACCA...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| 3UTR CAA 72 bp | TCAGGGCACTCCACCATGTTGCAGGTCATTAACACCTaGCATGCCAACGGCATGCAACGGCAGACAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SGHSTMLQVINT*HANGMQRQTRK Trigger: TTTCCTTGTCTGCCGTTGCATGCCGTTGGCATGCAAGGTGTTAATGACCTGCAACATGGTGGAGTGCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR TCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGCTTTGCCAGGGCTTCTaGCTTAACCACTCGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMLCQGF*LNHSEN Trigger: ATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGCAAAG...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCAGCCATTCCCAGACATaGCGCTTGGTCCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSHSQT*RLVQYS Trigger: TGAATACTGGACCAAGCGCCATGTCTGGGAATGGCT...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTTGGTCGCAGCAGAATTaGAGCCATTCCCAGACATGG | + |
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Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSWSQQN*SHSQTW Trigger: CCATGTCTGGGAATGGCTCCAATTCTGCTGCGACCA...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCAGTAGTCTTCATTGCTaGACAGATCGGTCCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSSLHC*TDRSKA Trigger: TGCCTTGGACCGATCTGTTCAGCAATGAAGACTACT...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCCGCTGATGTTGAAGTaGCAGAAGGAGATGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSPLMLK*QKEMQL Trigger: CAACTGCATCTCCTTCTGTCACTTCAACATCAGCGG...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCCTTTGCCAGGGCTTCTaGCTTAACCACTCGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLLCQGF*LNHSEN Trigger: ATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGCAAAG...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGAGTGACAGAAGGAGATaGAGTTGGCATCAAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMSDRRR*SWHQAC Trigger: ACAAGCTTGATGCCAACTGCATCTCCTTCTGTCACT...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTAGCCATTCCCAGACATaGCGCTTGGTCCAGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSSHSQT*RLVQYS Trigger: TGAATACTGGACCAAGCGCCATGTCTGGGAATGGCT...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGAGAAGGAGATGCAGTTaGCATCAAGCTTGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMRRRCS*HQACTG Trigger: ACCAGTACAAGCTTGATGCCAACTGCATCTCCTTCT...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGTGCGAGCGAATGTTCTaGAGAATGAAGTACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMCERMF*RMKYRY Trigger: GTACCTGTACTTCATTCTCCAGAACATTCGCTCGCA...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGAATGTTCTGGAGAATaGAGTACAGGTACTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSECSGE*STGTPH Trigger: GTGGGGAGTACCTGTACTTCATTCTCCAGAACATTC...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGAATCAGCATAGTCTTTaGTGCCAGTCTTGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMNQHSL*CQSWSL Trigger: AAGAGACCAAGACTGGCATCAAAGACTATGCTGATT...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCGACAGTCTTGACTCTTaGTGCCACTTGTTTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLDSLDS*CHLFSS Trigger: GCTTGAAAACAAGTGGCATCAAGAGTCAAGACTGTC...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGGTCATGCTGCAGAGCTaGAGGCCGCTGATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRVMLQS*RPLMLK Trigger: CTTCAACATCAGCGGCCTGCAGCTCTGCAGCATGAC...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACACCCAGACATGGCGCTTaGTCCAGTATTCAGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATPRHGA*SSIQGA Trigger: TGCACCCTGAATACTGGACCAAGCGCCATGTCTGGG...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCAGCATCAAGCTTGTACTaGTCGCAGCAGAATTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MPTACNGRQGNVSADFNPASSLY*SQQNWS Trigger: GCTCCAATTCTGCTGCGACCAGTACAAGCTTGATGC...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCAGAAGGAGATGCAGTTaGCATCAAGCTTGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLRRRCS*HQACTG Trigger: ACCAGTACAAGCTTGATGCCAACTGCATCTCCTTCT...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCAGTATTCAGGGTGCACTaGTGTCCAGTAGGAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: MPTACNGRQGNVSADFNPVFRVH*CPVGIT Trigger: TGTGATTCCTACTGGACATCAGTGCACCCTGAATAC...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCAGAATGTTCTGGAGAATaGAGTACAGGTACTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPTACNGRQGNVSADFNPECSGE*STGTPH Trigger: GTGGGGAGTACCTGTACTTCATTCTCCAGAACATTC...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGACAGTCTTGACTCTTaGTGCCACTTGTTTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSDSLDS*CHLFSS Trigger: GCTTGAAAACAAGTGGCATCAAGAGTCAAGACTGTC...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCACTTTGCCAGGGCTTCTaGCTTAACCACTCGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPTACNGRQGNVSADFNPLCQGF*LNHSEN Trigger: ATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGCAAAG...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGTGGTCGCAGCAGAATTaGAGCCATTCCCAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRWSQQN*SHSQTW Trigger: CCATGTCTGGGAATGGCTCCAATTCTGCTGCGACCA...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTTGCGAGCGAATGTTCTaGAGAATGAAGTACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSCERMF*RMKYRY Trigger: GTACCTGTACTTCATTCTCCAGAACATTCGCTCGCA...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTAATCAGCATAGTCTTTaGTGCCAGTCTTGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSACIAIQCRSLDSPNSNQHSL*CQSWSL Trigger: AAGAGACCAAGACTGGCATCAAAGACTATGCTGATT...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGACAGCAGCAAGTCTCTaGCAAATTCCCACAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRTAASL*QIPTGE Trigger: CTCACCTGTGGGAATTTGTCAGAGACTTGCTGCTGT...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAACAGCAGCAAGTCTCTaGCAAATTCCCACAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATTAASL*QIPTGE Trigger: CTCACCTGTGGGAATTTGTCAGAGACTTGCTGCTGT...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGTCTTCCTGCCACCCGTaGGCGTTCTTTCCAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRSSCHP*AFFPNL Trigger: CAAATTTGGAAAGAACGCGCACGGGTGGCAGGAAGA...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGGCATCAAGCTTGTACTaGTCGCAGCAGAATTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRASSLY*SQQNWS Trigger: GCTCCAATTCTGCTGCGACCAGTACAAGCTTGATGC...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAAGTAGTCTTCATTGCTaGACAGATCGGTCCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATSSLHC*TDRSKA Trigger: TGCCTTGGACCGATCTGTTCAGCAATGAAGACTACT...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAGTATTCAGGGTGCACTaGTGTCCAGTAGGAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATVFRVH*CPVGIT Trigger: TGTGATTCCTACTGGACATCAGTGCACCCTGAATAC...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAGAATGTTCTGGAGAATaGAGTACAGGTACTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATECSGE*STGTPH Trigger: GTGGGGAGTACCTGTACTTCATTCTCCAGAACATTC...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGGACAGTCTTGACTCTTaGTGCCACTTGTTTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CETAPITLAPLAPNTSLRDSLDS*CHLFSS Trigger: GCTTGAAAACAAGTGGCATCAAGAGTCAAGACTGTC...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAAGTGACAGAAGGAGATaGAGTTGGCATCAAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATSDRRR*SWHQAC Trigger: ACAAGCTTGATGCCAACTGCATCTCCTTCTGTCACT...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACAAGAAGGAGATGCAGTTaGCATCAAGCTTGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHFIKETVSHQVATRRRCS*HQACTG Trigger: ACCAGTACAAGCTTGATGCCAACTGCATCTCCTTCT...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| 3UTR CAA 72 bp | AGAGAAGAGATCGATGCTGTGTTCGGCTATCGTGGCTaGTTAGGACGTTCTCTGCTTGGTAAAGGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: REEIDAVFGYRG*LGRSLLGKGLM Trigger: CATTAAACCTTTACCAAGCAGAGAACGTCCTAACAAGCCACGATAGCCGAACACAGCATCGATCTCTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| 3UTR CAA 72 bp | GGATTGGCCGTGGATCAAGTGACTGTGGCTAAGTGGTaGGAAATGGTGATCTGGTTAAGAGACTTATTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLAVDQVTVAKW*EMVIWLRDLLV Trigger: TACTAATAAGTCTCTTAACCAGATCACCATTTCCAACCACTTAGCCACAGTCACTTGATCCACGGCCAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS CCA 90 bp | GGCATCAGGGGGTCACAGAAGGATGCGTTGGGCAGGAAGGTGCTATaGGTTACGGAGTCCAACATCACCCTCAGTTCATTTGTCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GIRGSQKDALGRKVL*VTESNITLSSFVPP Trigger: TGGCGGGACAAATGAACTGAGGGTGATGTTGGACTCCGTAACCCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGACCCCCTGATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
||
| CDS GCA 90 bp | AATGTTCTGGAGAATGAAGTACAGGTACTCCCCACAGATGCCGGCTaGCTCAATGAACTCCTCCTGCGTCATGCTGCAGAGCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NVLENEVQVLPTDAG*LNELLLRHAAELQA Trigger: GGCCTGCAGCTCTGCAGCATGACGCAGGAGGAGTTCATTGAGGCAGCCGGCATCTGTGGGGAGTACCTGTACTTCATTCTCCAGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGTCACAGAAGGATGCGTaGGGCAGGAAGGTGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMSQKDA*GRKVLW Trigger: CCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGA...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS GCA 90 bp | TCCAAGGCATCAGGGGGTCACAGAAGGATGCGTTGGGCAGGAAGGTaGTATGGGTTACGGAGTCCAACATCACCCTCAGTTCATTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKASGGHRRMRWAGR*YGLRSPTSPSVHLS Trigger: GGACAAATGAACTGAGGGTGATGTTGGACTCCGTAACCCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGACCCCCTGATGCCTTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCACAGAAGGATGCGTaGGGCAGGAAGGTGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSQKDA*GRKVLW Trigger: CCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGA...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS GCA 90 bp | CACATCTTTGCCAGGGCTTCTGACTTAACCACTCGGAAAATGCCCTaGTCCCTGTCTTCCCATTCCAGGATGCCACAGTTCTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HIFARASDLTTRKMP*SLSSHSRMPQFSSG Trigger: CCCTGAAGAGAACTGTGGCATCCTGGAATGGGAAGACAGGGAGCAGGGCATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGCAAAGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGTCGGCTGTGACAGTCTaGACTCTTGATGCCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMSAVTV*TLDATC Trigger: ACAAGTGGCATCAAGAGTCAAGACTGTCACAGCCGA...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCCAGAAGGAGATGCAGTaGGCATCAAGCTTGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLQKEMQ*ASSLYW Trigger: CCAGTACAAGCTTGATGCCAACTGCATCTCCTTCTG...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCGGCTGTGACAGTCTaGACTCTTGATGCCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSAVTV*TLDATC Trigger: ACAAGTGGCATCAAGAGTCAAGACTGTCACAGCCGA...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCAGTTGGCATCAAGCTaGTACTGGTCGCAGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSSACIAIQCRSLDSPNSQLASS*YWSQQN Trigger: ATTCTGCTGCGACCAGTACAAGCTTGATGCCAACTG...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGTGTCACACCAAGTTGCCACAAGACCATCCCTTCCTCCCCCTTGGGATGTCTTTGATGCCAGTCTaGGTCTCTTCAGCATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RQCHTKLPQDHPFLPLGMSLMPV*VSSASL Trigger: CAATGATGCTGAAGAGACCAAGACTGGCATCAAAGA...CATCCCAAGGGGGAGGAAGGGATGGTCTTGTGGCAACTTGGTGTGACACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCGTCATTCTTCTTCCTTaGTCCCCACATCTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLVILLP*SPHLCQ Trigger: CTGGCAAAGATGTGGGGACAAAGGAAGAAGAATGAC...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGTCACAGAAGGATGCGTaGGGCAGGAAGGTGCTATGG | + |
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Preference number: 5 (lower is better) Translates to: CETAPITLAPLAPNTSLRSQKDA*GRKVLW Trigger: CCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGA...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCACAGAAGGAGATGCAGTaGGCATCAAGCTTGTACTGG | + |
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Preference number: 5 (lower is better) Translates to: MPTACNGRQGNVSADFNPQKEMQ*ASSLYW Trigger: CCAGTACAAGCTTGATGCCAACTGCATCTCCTTCTG...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTCTTTGATGCCAGTCTaGGTCTCTTCAGCATCATTG | + |
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Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLSLMPV*VSSASL Trigger: CAATGATGCTGAAGAGACCAAGACTGGCATCAAAGA...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCTGTCATTCTTCTTCCTTaGTCCCCACATCTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSSACIAIQCRSLDSPNSVILLP*SPHLCQ Trigger: CTGGCAAAGATGTGGGGACAAAGGAAGAAGAATGAC...AGAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | GAGGTCTTCAGCCTGCATTGCTATTCAGTGCCGGTCACTAGACAGTCCCAACTCGCGTTCTTTCCAAATTaGTACACTAACCTCCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: EVFSLHCYSVPVTRQSQLAFFPN*YTNLRS Trigger: TGACCGGAGGTTAGTGTACAAATTTGGAAAGAACGC...GAGTTGGGACTGTCTAGTGACCGGCACTGAATAGCAATGCAGGCTGAAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCAGTCATTCTTCTTCCTTaGTCCCCACATCTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: MPTACNGRQGNVSADFNPVILLP*SPHLCQ Trigger: CTGGCAAAGATGTGGGGACAAAGGAAGAAGAATGAC...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TCCCTTAGCTCCAAACACTTCATTAAGGAGACAGTGTCACACCAAGTTGCCACATCACCCTCAGTTCATTaGTCCCGCCAGGTTGAACTG | + |
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Preference number: 5 (lower is better) Translates to: SLSSKHFIKETVSHQVATSPSVH*SRQVEL Trigger: CAGTTCAACCTGGCGGGACAAATGAACTGAGGGTGA...TGTGGCAACTTGGTGTGACACTGTCTCCTTAATGAAGTGTTTGGAGCTAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGCAGTTGGCATCAAGCTaGTACTGGTCGCAGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: CETAPITLAPLAPNTSLRQLASS*YWSQQN Trigger: ATTCTGCTGCGACCAGTACAAGCTTGATGCCAACTG...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGCAGAAGGAGATGCAGTaGGCATCAAGCTTGTACTGG | + |
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Preference number: 5 (lower is better) Translates to: CETAPITLAPLAPNTSLRQKEMQ*ASSLYW Trigger: CCAGTACAAGCTTGATGCCAACTGCATCTCCTTCTG...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAACGGCATGCAACGGCAGACAAGGAAATGTCAGTGCAGACTTTAACCCATCTTTGATGCCAGTCTaGGTCTCTTCAGCATCATTG | + |
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Preference number: 5 (lower is better) Translates to: MPTACNGRQGNVSADFNPSLMPV*VSSASL Trigger: CAATGATGCTGAAGAGACCAAGACTGGCATCAAAGA...TGGGTTAAAGTCTGCACTGACATTTCCTTGTCTGCCGTTGCATGCCGTTGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGTCGGCTGTGACAGTCTaGACTCTTGATGCCACTTGT | + |
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Preference number: 5 (lower is better) Translates to: CETAPITLAPLAPNTSLRSAVTV*TLDATC Trigger: ACAAGTGGCATCAAGAGTCAAGACTGTCACAGCCGA...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACAGCACCCATAACACTGGCTCCCTTAGCTCCAAACACTTCATTAAGGGCGTTCTTTCCAAATTaGTACACTAACCTCCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: CETAPITLAPLAPNTSLRAFFPN*YTNLRS Trigger: TGACCGGAGGTTAGTGTACAAATTTGGAAAGAACGC...CCTTAATGAAGTGTTTGGAGCTAAGGGAGCCAGTGTTATGGGTGCTGTTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000239273.2 |
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| CDS TCA 72 bp | AGTACAGGTACTCCCCACAGATGCCGGCTGCCTCAATaGACTCCTCCTGCGTCATGCTGCAGAGCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: STGTPHRCRLPQ*TPPASCCRAAG Trigger: GCCTGCAGCTCTGCAGCATGACGCAGGAGGAGTTCATTGAGGCAGCCGGCATCTGTGGGGAGTACCTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS CCA 72 bp | CGGTCCAAGGCATCAGGGGGTCACAGAAGGATGCGTTaGGCAGGAAGGTGCTATGGGTTACGGAGTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: RSKASGGHRRMR*AGRCYGLRSPT Trigger: TGTTGGACTCCGTAACCCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGACCCCCTGATGCCTTGGACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS GCA 72 bp | GAGAATGAAGTACAGGTACTCCCCACAGATGCCGGCTaGCTCAATGAACTCCTCCTGCGTCATGCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ENEVQVLPTDAG*LNELLLRHAAE Trigger: CTCTGCAGCATGACGCAGGAGGAGTTCATTGAGGCAGCCGGCATCTGTGGGGAGTACCTGTACTTCATTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS GCA 72 bp | GCCAGGGCTTCTGACTTAACCACTCGGAAAATGCCCTaGTCCCTGTCTTCCCATTCCAGGATGCCACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ARASDLTTRKMP*SLSSHSRMPQF Trigger: GAACTGTGGCATCCTGGAATGGGAAGACAGGGAGCAGGGCATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS GCA 72 bp | TCAGGGGGTCACAGAAGGATGCGTTGGGCAGGAAGGTaGTATGGGTTACGGAGTCCAACATCACCCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SGGHRRMRWAGR*YGLRSPTSPSV Trigger: AACTGAGGGTGATGTTGGACTCCGTAACCCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGACCCCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
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| CDS TCA 72 bp | CCAGACATGGCGCTTGGTCCAGTATTCAGGGTGCACTaGTGTCCAGTAGGAATCACAGGCTGTCTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: PDMALGPVFRVH*CPVGITGCLML Trigger: GAGCATCAGACAGCCTGTGATTCCTACTGGACATCAGTGCACCCTGAATACTGGACCAAGCGCCATGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS CCA 72 bp | GGGTCACAGAAGGATGCGTTGGGCAGGAAGGTGCTATaGGTTACGGAGTCCAACATCACCCTCAGTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: GSQKDALGRKVL*VTESNITLSSF Trigger: AAATGAACTGAGGGTGATGTTGGACTCCGTAACCCATAGCACCTTCCTGCCCAACGCATCCTTCTGTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
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| CDS TCA 72 bp | TCTGATGCTCAAAGGCAGGGTAGTAGTCTTCATTGCTaGACAGATCGGTCCAAGGCATCAGGGGGTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SDAQRQGSSLHC*TDRSKASGGHR Trigger: TCTGTGACCCCCTGATGCCTTGGACCGATCTGTTCAGCAATGAAGACTACTACCCTGCCTTTGAGCATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS TCA 72 bp | AAAAGGAGTAACCTTGCGAGCGAATGTTCTGGAGAATaGAGTACAGGTACTCCCCACAGATGCCGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KRSNLASECSGE*STGTPHRCRLP Trigger: AGGCAGCCGGCATCTGTGGGGAGTACCTGTACTTCATTCTCCAGAACATTCGCTCGCAAGGTTACTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS CAA 72 bp | TTCTCTTCCTGCCACCCGTGCGCGTTCTTTCCAAATTaGTACACTAACCTCCGGTCAACCCGCTCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: FSSCHPCAFFPN*YTNLRSTRSRI Trigger: AATTCTGGAGCGGGTTGACCGGAGGTTAGTGTACAAATTTGGAAAGAACGCGCACGGGTGGCAGGAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028609.14 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS CAA 72 bp | TATGGGTTACGGAGTCCAACATCACCCTCAGTTCATTaGTCCCGCCAGGTTGAACTGGACTCAGGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: YGLRSPTSPSVH*SRQVELDSGDL Trigger: CAGATCACCTGAGTCCAGTTCAACCTGGCGGGACAAATGAACTGAGGGTGATGTTGGACTCCGTAACCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239273.2 |
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| CDS CAA 90 bp | TTCCCACAGGTGAGAACTTTGGAGGCTTGTTCGGCTGTGACAGTCTaGACTCTTGATGCCACTTGTTTTCAAGCAACTGGAATCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: FPQVRTLEACSAVTV*TLDATCFQATGISI Trigger: TATGCTGATTCCAGTTGCTTGAAAACAAGTGGCATCAAGAGTCAAGACTGTCACAGCCGAACAAGCCTCCAAAGTTCTCACCTGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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| CDS CAA 72 bp | GTGAGAACTTTGGAGGCTTGTTCGGCTGTGACAGTCTaGACTCTTGATGCCACTTGTTTTCAAGCAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRTLEACSAVTV*TLDATCFQATG Trigger: TCCAGTTGCTTGAAAACAAGTGGCATCAAGAGTCAAGACTGTCACAGCCGAACAAGCCTCCAAAGTTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028609.14 ENSMUST00000126290.2 ENSMUST00000164172.8 ENSMUST00000171693.8 ENSMUST00000239273.2 |
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