Pregenerated sensors for ELF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031103Ensembl transcript IDs: ENSMUST00000033429.9, ENSMUST00000114958.8, ENSMUST00000140486.2
Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTACTCCCTAGTGCTCTTGAAGGCCCTGGTCTGGTGCCAGATGCTTaGACTGGGCACACTTTGGTCAGAGCGATGTCAAATAGGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: LLPSALEGPGLVPDA*TGHTLVRAMSNRPG Trigger: CCCAGGCCTATTTGACATCGCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | AAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGTaGGACTGTATGGCTGGAGCTAGCCTTGCCACCCCACTAGCCTCA | + |
Preference number: 1 (lower is better) Translates to: KKQRATVRARGWESE*DCMAGASLATPLAS Trigger: TGAGGCTAGTGGGGTGGCAAGGCTAGCTCCAGCCATACAGTCTCACTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | GATCAGCAGTTTAAGGACTGGCCTAGTCTGCAGGCCAGGACTCGCTaGAGGCTTTTTAGCAGAGGAAGGCCAGAGCAAGTAGCCTGCCAG | + |
Preference number: 1 (lower is better) Translates to: DQQFKDWPSLQARTR*RLFSRGRPEQVACQ Trigger: CTGGCAGGCTACTTGCTCTGGCCTTCCTCTGCTAAAAAGCCTTCAGCGAGTCCTGGCCTGCAGACTAGGCCAGTCCTTAAACTGCTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | AGGAGGGAGTCACATATCAGCCGCTGGGACGTGAGGACCATCACTTaGCTCCTGACTCCATTAGGCAGGCCATCACAAAAGCAGGGGGAT | + |
Preference number: 1 (lower is better) Translates to: RRESHISRWDVRTIT*LLTPLGRPSQKQGD Trigger: ATCCCCCTGCTTTTGTGATGGCCTGCCTAATGGAGTCAGGAGTCAAGTGATGGTCCTCACGTCCCAGCGGCTGATATGTGACTCCCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | GGGGGATTGCTGCCACCTGACTCTGGTTCAAGGAAATCTGTCTCCTaGGGTTCTCCTGTAAGCCTCTTGCAGAACGCTTGTCAGCAAGGG | + |
Preference number: 1 (lower is better) Translates to: GGLLPPDSGSRKSVS*GSPVSLLQNACQQG Trigger: CCCTTGCTGACAAGCGTTCTGCAAGAGGCTTACAGGAGAACCTCAGGAGACAGATTTCCTTGAACCAGAGTCAGGTGGCAGCAATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | AGTATGACCAGGCCTAACTCGTCCTGTGAAGCTGCTGACCAGATCTaGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCACCA | + |
Preference number: 1 (lower is better) Translates to: SMTRPNSSCEAADQI*PQAASWLVDFPPSP Trigger: TGGTGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGCAGCTTCACAGGACGAGTTAGGCCTGGTCATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 90 bp | CAAGAGCACATCTACTCCCTAGTGCTCTTGAAGGCCCTGGTCTGGTaGCAGATGCTTGAACTGGGCACACTTTGGTCAGAGCGATGTCAA | + |
Preference number: 1 (lower is better) Translates to: QEHIYSLVLLKALVW*QMLELGTLWSERCQ Trigger: TTGACATCGCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAGATGTGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 90 bp | TTGAGCTTGGAAGGTAGCACAGTTGCTAGGAGTACTCGTCACGCCTaGACAGAGTCCTGGCTTTGGTCCACAGAACCACATGGTGATCCA | + |
Preference number: 1 (lower is better) Translates to: LSLEGSTVARSTRHA*TESWLWSTEPHGDP Trigger: TGGATCACCATGTGGTTCTGTGGACCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACTCCTAGCAACTGTGCTACCTTCCAAGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 90 bp | CTCCTGACTCCATTAGGCAGGCCATCACAAAAGCAGGGGGATTGCTaGCACCTGACTCTGGTTCAAGGAAATCTGTCTCCTGAGGTTCTC | + |
Preference number: 1 (lower is better) Translates to: LLTPLGRPSQKQGDC*HLTLVQGNLSPEVL Trigger: GAGAACCTCAGGAGACAGATTTCCTTGAACCAGAGTCAGGTGGCAGCAATCCCCCTGCTTTTGTGATGGCCTGCCTAATGGAGTCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | TTCCAAGAGCACATCTACTCCCTAGTGCTCTTGAAGGCCCTGGTCTaGTGCCAGATGCTTGAACTGGGCACACTTTGGTCAGAGCGATGT | + |
Preference number: 1 (lower is better) Translates to: FQEHIYSLVLLKALV*CQMLELGTLWSERC Trigger: ACATCGCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAGATGTGCTCTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 90 bp | AACAGACATTTCAGCGCCAATTGCTGGGAATGTAGCAAACACACCTaGATAGAGCCACAGATGGCTCCTTCCTCCAGGGAAGGAGAGGGA | + |
Preference number: 1 (lower is better) Translates to: NRHFSANCWECSKHT*IEPQMAPSSREGEG Trigger: TCCCTCTCCTTCCCTGGAGGAAGGAGCCATCTGTGGCTCTATGCAGGTGTGTTTGCTACATTCCCAGCAATTGGCGCTGAAATGTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | TTCTCCTACCTAGACCTTTTCCAGCTCTGTGACACCTCTATAGACTaGGAGGAGGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGC | + |
Preference number: 1 (lower is better) Translates to: FSYLDLFQLCDTSID*EEGHSTSSFQSQKG Trigger: GCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCCTCCTCCCAGTCTATAGAGGTGTCACAGAGCTGGAAAAGGTCTAGGTAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | ACAGTTGCTAGGAGTACTCGTCACGCCTGCACAGAGTCCTGGCTTTaGTCCACAGAACCACATGGTGATCCACATGTGAGAACAAGGAAG | + |
Preference number: 1 (lower is better) Translates to: TVARSTRHACTESWL*STEPHGDPHVRTRK Trigger: CTTCCTTGTTCTCACATGTGGATCACCATGTGGTTCTGTGGACCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACTCCTAGCAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | GTGAAGCTGCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTaGATTTCCCTCCATCACCAAGTCAGCTCATTTTCATTCCAAGAG | + |
Preference number: 1 (lower is better) Translates to: VKLLTRSGHKLLPGL*ISLHHQVSSFSFQE Trigger: CTCTTGGAATGAAAATGAGCTGACTTGGTGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGCAGCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | TCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGCAGACTCATaGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTC | + |
Preference number: 1 (lower is better) Translates to: SGELFPETEKRKADS*ADRSCRNPCVLAPV Trigger: GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGCTTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | TATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAGCTCTGTaGCACCTCTATAGACTGGGAGGAGGGGCATTCCACCAGTTCCTT | + |
Preference number: 1 (lower is better) Translates to: YAPIEVLLPRPFPAL*HLYRLGGGAFHQFL Trigger: AAGGAACTGGTGGAATGCCCCTCCTCCCAGTCTATAGAGGTGTCACAGAGCTGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | ACCTCAAAAGTTTGCTTCCCAGCTCTCATCAGATCAAACAGTAACTaGTCAGGGATGCTCATCTGCGTTATAGTATGCCCAGTGTTGTGG | + |
Preference number: 1 (lower is better) Translates to: TSKVCFPALIRSNSN*SGMLICVIVCPVLW Trigger: CCACAACACTGGGCATACTATAACGCAGATGAGCATCCCTGACCAGTTACTGTTTGATCTGATGAGAGCTGGGAAGCAAACTTTTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | GGACCCACTAGTGAAATGCCACCGACTTCGAGCTCTTTTCCCTGGTaGGTTGTTATCAAACTTCAAATCTTTCAAGATTTACTCTCCAAG | + |
Preference number: 1 (lower is better) Translates to: GPTSEMPPTSSSFPW*VVIKLQIFQDLLSK Trigger: CTTGGAGAGTAAATCTTGAAAGATTTGAAGTTTGATAACAACCCACCAGGGAAAAGAGCTCGAAGTCGGTGGCATTTCACTAGTGGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | AGAGCATATTGGTTAGATGGAACCCAGGAAAGAAAAGGCATTAAGTaGGAACAAGTTCAAAGACCATGGACTCCTCGAAGAGTACCTTGG | + |
Preference number: 1 (lower is better) Translates to: RAYWLDGTQERKGIK*EQVQRPWTPRRVPW Trigger: CCAAGGTACTCTTCGAGGAGTCCATGGTCTTTGAACTTGTTCCCACTTAATGCCTTTTCTTTCCTGGGTTCCATCTAACCAATATGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 90 bp | TCCTGCTCTGGAGGAGCTCACAGTCTGTTGAAGGGAAACCGTACATaGACACAATCAAAGAACTACATACAATGTGCTACAATAAGAGGT | + |
Preference number: 1 (lower is better) Translates to: SCSGGAHSLLKGNRT*TQSKNYIQCATIRG Trigger: ACCTCTTATTGTAGCACATTGTATGTAGTTCTTTGATTGTGTTCATGTACGGTTTCCCTTCAACAGACTGTGAGCTCCTCCAGAGCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | GCTTGTCAGCAAGGGTTAGTTAACCGGTTAGCTAGTTTAACACTCTaGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTTAGGATCAGAG | + |
Preference number: 1 (lower is better) Translates to: ACQQGLVNRLASLTL*VRKKLNKKLSLGSE Trigger: CTCTGATCCTAAAGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCGGTTAACTAACCCTTGCTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 90 bp | GTCCATCAAGTGGCAGTTACAAGTTTAAGAATTAAAGGTAAGAACTaGCTGTTCCCACTCAATTCCATCTTGAGACACAGTTTTCCATTG | + |
Preference number: 1 (lower is better) Translates to: VHQVAVTSLRIKGKN*LFPLNSILRHSFPL Trigger: CAATGGAAAACTGTGTCTCAAGATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAACTGCCACTTGATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCTGGTGCCAGATGCTTaGACTGGGCACACTTTGGTC | + |
Preference number: 2 (lower is better) Translates to: ADSWADRSCRNPCVLAPVLVPDA*TGHTLV Trigger: GACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | GAGGAGGGAGTCACATATCAGCCGCTGGGACGTGAGGACCATCACTaGACTCCTGACTCCATTAGGCAGGCCATCACAAAAGCAGGGGGA | + |
Preference number: 2 (lower is better) Translates to: EEGVTYQPLGREDHH*TPDSIRQAITKAGG Trigger: TCCCCCTGCTTTTGTGATGGCCTGCCTAATGGAGTCAGGAGTCAAGTGATGGTCCTCACGTCCCAGCGGCTGATATGTGACTCCCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCTGCTTCCTGGCTTGTaGATTTCCCTCCATCACCAA | + |
Preference number: 2 (lower is better) Translates to: ADSWADRSCRNPCVLAPVLLPGL*ISLHHQ Trigger: TTGGTGATGGAGGGAAATCCACAAGCCAGGAAGCAG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGAAGGCCCTGGTCTGGTaGCAGATGCTTGAACTGGGC | + |
Preference number: 2 (lower is better) Translates to: GRNKKQRATVRARGWESEKALVW*QMLELG Trigger: GCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTT...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACAGCCAGATGCTTGAACTaGGCACACTTTGGTCAGAGC | + |
Preference number: 2 (lower is better) Translates to: GAFHQFLPVSERHCCLPTARCLN*AHFGQS Trigger: GCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGC...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGCCACAAGCTGCTTCCTaGCTTGTGGATTTCCCTCCA | + |
Preference number: 2 (lower is better) Translates to: GRNKKQRATVRARGWESEPQAAS*LVDFPP Trigger: TGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGG...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | GTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTaGAAGGCCCTGGTCTGGTGCCAGATGCTTGAACTGGGCACACTT | + |
Preference number: 2 (lower is better) Translates to: VSSFSFQEHIYSLVL*KALVWCQMLELGTL Trigger: AAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | CCTGTGAAGCTGCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTaGTGGATTTCCCTCCATCACCAAGTCAGCTCATTTTCATTCCAA | + |
Preference number: 2 (lower is better) Translates to: PVKLLTRSGHKLLPG*WISLHHQVSSFSFQ Trigger: TTGGAATGAAAATGAGCTGACTTGGTGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGCAGCTTCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGCCTTTTCCAGCTCTGTaGCACCTCTATAGACTGGGA | + |
Preference number: 2 (lower is better) Translates to: GRNKKQRATVRARGWESEPFPAL*HLYRLG Trigger: TCCCAGTCTATAGAGGTGTCACAGAGCTGGAAAAGG...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAAGCAAAGAGCCACTGTaGGAGCGAGAGGGTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRSKEPL*EREGGR Trigger: TCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAAAGGCCCTGGTCTGGTaGCAGATGCTTGAACTGGGC | + |
Preference number: 2 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPKALVW*QMLELG Trigger: GCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTT...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGCTGCTGACCAGATCTaGCCACAAGCTGCTTCCTGG | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRAADQI*PQAASW Trigger: CCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGCAGC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | ATGGCCTCTTGTCCCTTAGCAGTGTCCTCTCAGCATATGCACCCATaGAAGTTCTCCTACCTAGACCTTTTCCAGCTCTGTGACACCTCT | + |
Preference number: 2 (lower is better) Translates to: MASCPLAVSSQHMHP*KFSYLDLFQLCDTS Trigger: AGAGGTGTCACAGAGCTGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACTGCTAAGGGACAAGAGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAAGTACTCGTCACGCCTaGACAGAGTCCTGGCTTTGG | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRSTRHA*TESWLW Trigger: CCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATCGGGTTCCAGCCTGGTaGCAAGGTGACTATGACAAG | + |
Preference number: 2 (lower is better) Translates to: KREPKIGKEEYWITKGCYRVPAW*QGDYDK Trigger: CTTGTCATAGTCACCTTGCCACCAGGCTGGAACCCG...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | ACTTCAAATCTTTCAAGATTTACTCTCCAAGTGCTCCCCAACTTCTaGGGCCCTGCCACGATTGGGGAACTAAAGCTAGGCCTAGACCAG | + |
Preference number: 2 (lower is better) Translates to: TSNLSRFTLQVLPNF*GPATIGELKLGLDQ Trigger: CTGGTCTAGGCCTAGCTTTAGTTCCCCAATCGTGGCAGGGCCCAAGAAGTTGGGGAGCACTTGGAGAGTAAATCTTGAAAGATTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTAGGGGCAGGGTCAAGTaGACAGAGCCCACCAGACAG | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSRGRVK*TEPTRQ Trigger: CTGTCTGGTGGGCTCTGTGCACTTGACCCTGCCCCT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCACCACAAGCTGCTTCCTaGCTTGTGGATTTCCCTCCA | + |
Preference number: 2 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPPQAAS*LVDFPP Trigger: TGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGG...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | GGGAGGAGGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATaGTTGCTTGCCAACAACAACAAGAAAAAGTTACAGAGTGCTTTC | + |
Preference number: 2 (lower is better) Translates to: GRRGIPPVPSSLRKA*LLANNNKKKLQSAF Trigger: GAAAGCACTCTGTAACTTTTTCTTGTTGTTGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCCTCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAACTAGCCTCAGCAACTaGGGACAGGTGGAATTTCTC | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRTSLSN*GQVEFL Trigger: GAGAAATTCCACCTGTCCTCAGTTGCTGAGGCTAGT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGGGTGGGAGAGTGAGTaGGACTGTATGGCTGGAGCT | + |
Preference number: 2 (lower is better) Translates to: SAERLRSGELFPETEKRKGWESE*DCMAGA Trigger: AGCTCCAGCCATACAGTCTCACTCACTCTCCCACCC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGAGAGGGTGGGAGAGTaGGTGAGACTGTATGGCTGG | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSERVGE*VRLYGW Trigger: CCAGCCATACAGTCTCACTCACTCTCCCACCCTCTC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTAGCAAAGAGCCACTGTaGGAGCGAGAGGGTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSKEPL*EREGGR Trigger: TCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTATTGAAGGCCCTGGTCTaGTGCCAGATGCTTGAACTG | + |
Preference number: 2 (lower is better) Translates to: VFLLSPTMVLTYMASCPLLKALV*CQMLEL Trigger: CAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAA...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGCAACTGAGGACAGGTaGAATTTCTCAGCGCAGACA | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRATEDR*NFSAQT Trigger: TGTCTGCGCTGAGAAATTCCACCTGTCCTCAGTTGC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR TCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAACTTGGTTCTGGGTGTaGCATCTCCACACATTGTTC | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRTWFWV*HLHTLF Trigger: GAACAATGTGTGGAGATGTCACACCCAGAACCAAGT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCAGGGGCAGGGTCAAGTaGACAGAGCCCACCAGACAG | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIRGRVK*TEPTRQ Trigger: CTGTCTGGTGGGCTCTGTGCACTTGACCCTGCCCCT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACAAAATGGAGACCCTTaGAGAACACCCACACACAGA | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRQNGDP*RTPTHR Trigger: TCTGTGTGTGGGTGTTCTCCAAGGGTCTCCATTTTG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAATACAGACCCACAAGTaGACACAGATGCATACGAAG | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRIQTHK*TQMHTK Trigger: CTTCGTATGCATCTGTGTGCACTTGTGGGTCTGTAT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACATTTCAGCGCCAATTaGTGGGAATGTAGCAAACAC | + |
Preference number: 2 (lower is better) Translates to: EISSLEGQQNGGIMNRSRHFSAN*WECSKH Trigger: GTGTTTGCTACATTCCCAGCAATTGGCGCTGAAATG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR CAA 90 bp | ACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATaGTCAAGCATAGGGCTGATTTTATACAAACAGCCAAAAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: TQDREGRVLDHKGLL*SSIGLILYKQPKAL Trigger: CAGGGCTTTTGGCTGTTTGTATAAAATCAGCCCTATGCTTGACAATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCCTGGTGCCAGATGCTTaGACTGGGCACACTTTGGTC | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSILVPDA*TGHTLV Trigger: GACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAG...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGATTTACTCTCCAAGTaGTCCCCAACTTCTTGGGCC | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSDLLSK*SPTSWA Trigger: GGCCCAAGAAGTTGGGGAGCACTTGGAGAGTAAATC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGACCCACTAGTGAAATaGCACCGACTTCGAGCTCTT | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSDPLVK*HRLRAL Trigger: AAGAGCTCGAAGTCGGTGGCATTTCACTAGTGGGTC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTCTGCTTCCTGGCTTGTaGATTTCCCTCCATCACCAA | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSLLPGL*ISLHHQ Trigger: TTGGTGATGGAGGGAAATCCACAAGCCAGGAAGCAG...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 90 bp | CCACTAGTGAAATGCCACCGACTTCGAGCTCTTTTCCCTGGTGGGTaGTTATCAAACTTCAAATCTTTCAAGATTTACTCTCCAAGTGCT | + |
Preference number: 2 (lower is better) Translates to: PLVKCHRLRALFPGG*LSNFKSFKIYSPSA Trigger: AGCACTTGGAGAGTAAATCTTGAAAGATTTGAAGTTTGATAACAACCCACCAGGGAAAAGAGCTCGAAGTCGGTGGCATTTCACTAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTCAGGGATGCTCATCTaGGTTATAGTATGCCCAGTG | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSGMLI*VIVCPV Trigger: CACTGGGCATACTATAACGCAGATGAGCATCCCTGA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCGCCAGATGCTTGAACTaGGCACACTTTGGTCAGAGC | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIARCLN*AHFGQS Trigger: GCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGC...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR GCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAAATGCTTCACAATTTTaGCCGGTGGGTCATACTTTT | + |
Preference number: 2 (lower is better) Translates to: VFLLSPTMVLTYMASCPLNASQF*PVGHTF Trigger: AAAAGTATGACCCACCGGGCAAAATTGTGAAGCATT...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGCTACCTCAAAAGTTTaGTTCCCAGCTCTCATCAGA | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSATSKV*FPALIR Trigger: TCTGATGAGAGCTGGGAAGCAAACTTTTGAGGTAGC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCAGAAAAGCAGACTCATaGGCTGACAGGAGCTGTAGG | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIRKADS*ADRSCR Trigger: CCTACAGCTCCTGTCAGCCCATGAGTCTGCTTTTCT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR TCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCACTTGGTTCTGGGTGTaGCATCTCCACACATTGTTC | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSITWFWV*HLHTLF Trigger: GAACAATGTGTGGAGATGTCACACCCAGAACCAAGT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTAATGCTTCACAATTTTaGCCGGTGGGTCATACTTTT | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSNASQF*PVGHTF Trigger: AAAAGTATGACCCACCGGGCAAAATTGTGAAGCATT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTCAGAAAGGCATTGTTaGTTGCCAACAACAACAAGA | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSERHC*LPTTTR Trigger: TCTTGTTGTTGTTGGCAAGCAACAATGCCTTTCTGA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCAGAAGGTCAGCAGAATaGTGGCATCATGAACAGAAG | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIRRSAE*WHHEQK Trigger: CTTCTGTTCATGATGCCACCATTCTGCTGACCTTCT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCCTAGAAAATCCTGAGTaGGTGGGGATCAGCAGTTTA | + |
Preference number: 2 (lower is better) Translates to: VTSLRIKGKNWLFPLNSILENPE*VGISSL Trigger: TAAACTGCTGATCCCCACCCACTCAGGATTTTCTAG...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTATTAAAGGTAAGAACTaGCTGTTCCCACTCAATTCC | + |
Preference number: 2 (lower is better) Translates to: RLASLTLWVRKKLNKKLSIKGKN*LFPLNS Trigger: GGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAAT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR GCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGAAAAAGTTACAGAGTaGTTTCTCTTAAAACTGCCT | + |
Preference number: 2 (lower is better) Translates to: SAERLRSGELFPETEKRKEKVTE*FLLKLP Trigger: AGGCAGTTTTAAGAGAAAGCACTCTGTAACTTTTTC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 72 bp | TGGGTGGGGATCAGCAGTTTAAGGACTGGCCTAGTCTaGAGGCCAGGACTCGCTGAAGGCTTTTTAGCAGAG | + |
Preference number: 3 (lower is better) Translates to: WVGISSLRTGLV*RPGLAEGFLAE Trigger: CTCTGCTAAAAAGCCTTCAGCGAGTCCTGGCCTGCAGACTAGGCCAGTCCTTAAACTGCTGATCCCCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | AGGCCTAACTCGTCCTGTGAAGCTGCTGACCAGATCTaGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCT | + |
Preference number: 3 (lower is better) Translates to: RPNSSCEAADQI*PQAASWLVDFP Trigger: AGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGCAGCTTCACAGGACGAGTTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | TGCCAGAGAGAAGTGCTGAGAAGTCACATTGGGAAGTaGGACGTTAAGAGGCATGGGCTAGGCTGGAGGCTC | + |
Preference number: 3 (lower is better) Translates to: CQREVLRSHIGK*DVKRHGLGWRL Trigger: GAGCCTCCAGCCTAGCCCATGCCTCTTAACGTCCCACTTCCCAATGTGACTTCTCAGCACTTCTCTCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCAGCATATGCACCCATaGAAGTTCTCCTACCTAGAC | + |
Preference number: 3 (lower is better) Translates to: ADSWADRSCRNPCVLAPVQHMHP*KFSYLD Trigger: GTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 72 bp | GAAGGTAGCACAGTTGCTAGGAGTACTCGTCACGCCTaGACAGAGTCCTGGCTTTGGTCCACAGAACCACAT | + |
Preference number: 3 (lower is better) Translates to: EGSTVARSTRHA*TESWLWSTEPH Trigger: ATGTGGTTCTGTGGACCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACTCCTAGCAACTGTGCTACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | CACATCTACTCCCTAGTGCTCTTGAAGGCCCTGGTCTaGTGCCAGATGCTTGAACTGGGCACACTTTGGTCA | + |
Preference number: 3 (lower is better) Translates to: HIYSLVLLKALV*CQMLELGTLWS Trigger: TGACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | AGGAGTACTCGTCACGCCTGCACAGAGTCCTGGCTTTaGTCCACAGAACCACATGGTGATCCACATGTGAGA | + |
Preference number: 3 (lower is better) Translates to: RSTRHACTESWL*STEPHGDPHVR Trigger: TCTCACATGTGGATCACCATGTGGTTCTGTGGACCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | GTTGCTAGGAGTACTCGTCACGCCTGCACAGAGTCCTaGCTTTGGTCCACAGAACCACATGGTGATCCACAT | + |
Preference number: 3 (lower is better) Translates to: VARSTRHACTES*LWSTEPHGDPH Trigger: ATGTGGATCACCATGTGGTTCTGTGGACCAAAGCCAGGACTCTGTGCAGGCGTGACGAGTACTCCTAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 72 bp | AGTGCTCTTGAAGGCCCTGGTCTGGTGCCAGATGCTTaGACTGGGCACACTTTGGTCAGAGCGATGTCAAAT | + |
Preference number: 3 (lower is better) Translates to: SALEGPGLVPDA*TGHTLVRAMSN Trigger: ATTTGACATCGCTCTGACCAAAGTGTGCCCAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 72 bp | TTTAAGGACTGGCCTAGTCTGCAGGCCAGGACTCGCTaGAGGCTTTTTAGCAGAGGAAGGCCAGAGCAAGTA | + |
Preference number: 3 (lower is better) Translates to: FKDWPSLQARTR*RLFSRGRPEQV Trigger: TACTTGCTCTGGCCTTCCTCTGCTAAAAAGCCTTCAGCGAGTCCTGGCCTGCAGACTAGGCCAGTCCTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 72 bp | TCACATATCAGCCGCTGGGACGTGAGGACCATCACTTaGCTCCTGACTCCATTAGGCAGGCCATCACAAAAG | + |
Preference number: 3 (lower is better) Translates to: SHISRWDVRTIT*LLTPLGRPSQK Trigger: CTTTTGTGATGGCCTGCCTAATGGAGTCAGGAGTCAAGTGATGGTCCTCACGTCCCAGCGGCTGATATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 72 bp | TTCAGCGCCAATTGCTGGGAATGTAGCAAACACACCTaGATAGAGCCACAGATGGCTCCTTCCTCCAGGGAA | + |
Preference number: 3 (lower is better) Translates to: FSANCWECSKHT*IEPQMAPSSRE Trigger: TTCCCTGGAGGAAGGAGCCATCTGTGGCTCTATGCAGGTGTGTTTGCTACATTCCCAGCAATTGGCGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 72 bp | ATTTACTCTCCAAGTGCTCCCCAACTTCTTGGGCCCTaGCACGATTGGGGAACTAAAGCTAGGCCTAGACCA | + |
Preference number: 3 (lower is better) Translates to: IYSPSAPQLLGP*HDWGTKARPRP Trigger: TGGTCTAGGCCTAGCTTTAGTTCCCCAATCGTGGCAGGGCCCAAGAAGTTGGGGAGCACTTGGAGAGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR GCA 72 bp | GAGAGGGGAGGACGGCGGTCAGCTACCTCAAAAGTTTaGTTCCCAGCTCTCATCAGATCAAACAGTAACTGG | + |
Preference number: 3 (lower is better) Translates to: ERGGRRSATSKV*FPALIRSNSNW Trigger: CCAGTTACTGTTTGATCTGATGAGAGCTGGGAAGCAAACTTTTGAGGTAGCTGACCGCCGTCCTCCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGATACTCCCTAGTGCTCTaGAAGGCCCTGGTCTGGTGC | + |
Preference number: 3 (lower is better) Translates to: EISSLEGQQNGGIMNRSRYSLVL*KALVWC Trigger: GCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTA...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 72 bp | GTAGGAACCCATGTGTGCTCGCTCCTGTCATCTCAGTaGAGCGAGAATCGGGTTAGATGTGATGGGCAGAAA | + |
Preference number: 3 (lower is better) Translates to: VGTHVCSLLSSQ*SENRVRCDGQK Trigger: TTTCTGCCCATCACATCTAACCCGATTCTCGCTTCACTGAGATGACAGGAGCGAGCACACATGGGTTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR TCA 72 bp | GGAACTAAAGCTAGGCCTAGACCAGCTAGAAAATCCTaGGTGGGTGGGGATCAGCAGTTTAAGGACTGGCCT | + |
Preference number: 3 (lower is better) Translates to: GTKARPRPARKS*VGGDQQFKDWP Trigger: AGGCCAGTCCTTAAACTGCTGATCCCCACCCACTCAGGATTTTCTAGCTGGTCTAGGCCTAGCTTTAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR CCA 72 bp | CTAAAGCTAGGCCTAGACCAGCTAGAAAATCCTGAGTaGGTGGGGATCAGCAGTTTAAGGACTGGCCTAGTC | + |
Preference number: 3 (lower is better) Translates to: LKLGLDQLENPE*VGISSLRTGLV Trigger: GACTAGGCCAGTCCTTAAACTGCTGATCCCCACCCACTCAGGATTTTCTAGCTGGTCTAGGCCTAGCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR TCA 72 bp | ATTGAAGTTCTCCTACCTAGACCTTTTCCAGCTCTGTaGCACCTCTATAGACTGGGAGGAGGGGCATTCCAC | + |
Preference number: 3 (lower is better) Translates to: IEVLLPRPFPAL*HLYRLGGGAFH Trigger: GTGGAATGCCCCTCCTCCCAGTCTATAGAGGTGTCACAGAGCTGGAAAAGGTCTAGGTAGGAGAACTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTACTCCCTAGTGCTCTaGAAGGCCCTGGTCTGGTGC | + |
Preference number: 3 (lower is better) Translates to: RLASLTLWVRKKLNKKLSYSLVL*KALVWC Trigger: GCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
3UTR GCA 72 bp | ATCAAACTTCAAATCTTTCAAGATTTACTCTCCAAGTaGTCCCCAACTTCTTGGGCCCTGCCACGATTGGGG | + |
Preference number: 3 (lower is better) Translates to: IKLQIFQDLLSK*SPTSWALPRLG Trigger: CCCCAATCGTGGCAGGGCCCAAGAAGTTGGGGAGCACTTGGAGAGTAAATCTTGAAAGATTTGAAGTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | AGAAAAGGCATTAAGTGGGAACAAGTTCAAAGACCATaGACTCCTCGAAGAGTACCTTGGCATGGGGTGAGT | + |
Preference number: 3 (lower is better) Translates to: RKGIKWEQVQRP*TPRRVPWHGVS Trigger: ACTCACCCCATGCCAAGGTACTCTTCGAGGAGTCCATGGTCTTTGAACTTGTTCCCACTTAATGCCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTAAGCTGCTTCCTGGCTaGTGGATTTCCCTCCATCAC | + |
Preference number: 3 (lower is better) Translates to: RLASLTLWVRKKLNKKLSKLLPG*WISLHH Trigger: GTGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCTCCTCGAAGAGTACCTaGGCATGGGGTGAGTGGGGA | + |
Preference number: 3 (lower is better) Translates to: VTSLRIKGKNWLFPLNSISSKST*AWGEWG Trigger: TCCCCACTCACCCCATGCCAAGGTACTCTTCGAGGA...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTACAAAATGGAGACCCTaGGAGAACACCCACACACAG | + |
Preference number: 3 (lower is better) Translates to: RLASLTLWVRKKLNKKLSTKWRP*ENTHTQ Trigger: CTGTGTGTGGGTGTTCTCCAAGGGTCTCCATTTTGT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTAGCTACCTCAAAAGTTaGCTTCCCAGCTCTCATCAG | + |
Preference number: 3 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSYLKS*LPSSHQ Trigger: CTGATGAGAGCTGGGAAGCAAACTTTTGAGGTAGCT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR TCA 72 bp | GGAGGAGCTCACAGTCTGTTGAAGGGAAACCGTACATaGACACAATCAAAGAACTACATACAATGTGCTACA | + |
Preference number: 3 (lower is better) Translates to: GGAHSLLKGNRT*TQSKNYIQCAT Trigger: TGTAGCACATTGTATGTAGTTCTTTGATTGTGTTCATGTACGGTTTCCCTTCAACAGACTGTGAGCTCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | ACTAGTGAAATGCCACCGACTTCGAGCTCTTTTCCCTaGTGGGTTGTTATCAAACTTCAAATCTTTCAAGAT | + |
Preference number: 3 (lower is better) Translates to: TSEMPPTSSSFP*WVVIKLQIFQD Trigger: ATCTTGAAAGATTTGAAGTTTGATAACAACCCACCAGGGAAAAGAGCTCGAAGTCGGTGGCATTTCACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR-3UTR CAA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCCTCAGAAAGGCATTGTaGCTTGCCAACAACAACAAG | + |
Preference number: 3 (lower is better) Translates to: VTSLRIKGKNWLFPLNSILRKAL*LANNNK Trigger: CTTGTTGTTGTTGGCAAGCAACAATGCCTTTCTGAG...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CCA 72 bp | GTGGCAGTTACAAGTTTAAGAATTAAAGGTAAGAACTaGCTGTTCCCACTCAATTCCATCTTGAGACACAGT | + |
Preference number: 3 (lower is better) Translates to: VAVTSLRIKGKN*LFPLNSILRHS Trigger: ACTGTGTCTCAAGATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAACTGCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCACAGTCCCAGGGGGCTaGGAGCTAGGCCCTGCTGAC | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVTVPGG*ELGPAD Trigger: GTCAGCAGGGCCTAGCTCTCAGCCCCCTGGGACTGT...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAGGAGCTGGGTTGCTCTaGGGGTTGGCCCCAGCCAGA | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSGAGLL*GLAPAR Trigger: TCTGGCTGGGGCCAACCCTCAGAGCAACCCAGCTCC...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCGGCTGGCAAGCATGGTaGAGGTGGTGGGAACCTCCT | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVGWQAW*RWWEPP Trigger: AGGAGGTTCCCACCACCTCCACCATGCTTGCCAGCC...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAGGGATGGAGCTGGGTTaGTCTGAGGGTTGGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSGMELG*SEGWPQ Trigger: CTGGGGCCAACCCTCAGAGCAACCCAGCTCCATCCC...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCGCACTTCCGGTGAGCTaGAGATCTGCTTCTCATCCA | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVALPVS*RSASHP Trigger: TGGATGAGAAGCAGATCTTCAGCTCACCGGAAGTGC...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR TCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACACACGGCTGGGAACACTaGAGGGTCTTCCAGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: GAFHQFLPVSERHCCLPTHGWEH*RVFQLV Trigger: CACCAGCTGGAAGACCCTTCAGTGTTCCCAGCCGTG...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCAGGTGTTTCTGTCTTaGAGAAGAGCCAGGAGGAAC | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVQVFLS*RRARRN Trigger: GTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATCCTCGGGGGAGGCTCTaGTTCCGACCCTGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: KREPKIGKEEYWITKGCYPRGRL*FRPWSW Trigger: CCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGG...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCACAAGCATGGTGGAGGTaGTGGGAACCTCCTCATCCA | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSQAWWR*WEPPHP Trigger: TGGATGAGGAGGTTCCCACCACCTCCACCATGCTTG...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCGGTTCTCTTGCAAATTaGTGTTCAGGGGGAAGGAGG | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVGSLAN*CSGGRR Trigger: CCTCCTTCCCCCTGAACACCAATTTGCAAGAGAACC...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGGCCCCAGCCAGAAGTTaGGGGAGACCACTGAGGATC | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESEAPARS*GRPLRI Trigger: GATCCTCAGTGGTCTCCCCCAACTTCTGGCTGGGGC...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGGATGGTCTGCAGGGTaGCAGTGGAGCCAGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRGWSAG*QWSQAP Trigger: TGGGGCCTGGCTCCACTGTCACCCTGCAGACCATCC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGGAGCTGGGTTGCTCTaGGGGTTGGCCCCAGCCAGA | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLGAGLL*GLAPAR Trigger: TCTGGCTGGGGCCAACCCTCAGAGCAACCCAGCTCC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAACAGTCCCAGGGGGCTaGGAGCTAGGCCCTGCTGAC | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPTVPGG*ELGPAD Trigger: GTCAGCAGGGCCTAGCTCTCAGCCCCCTGGGACTGT...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCGGTGAGCTGAAGATCTaGTTCTCATCCAGGACATCA | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVGELKI*FSSRTS Trigger: TGATGTCCTGGATGAGAAGCAGATCTTCAGCTCACC...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGGCTTGCCCCACAGCTTaGACACAGCCTTGGAGTCCA | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESEACPTA*TQPWSP Trigger: TGGACTCCAAGGCTGTGTCCAAGCTGTGGGGCAAGC...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCTAGGTGGATGTTACTaGGTGCTGGAGAAGAACTCA | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVLGGCY*VLEKNS Trigger: TGAGTTCTTCTCCAGCACCCAGTAACATCCACCTAG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCATCGGTTTCTCTTCCGTaGCTTCCCCATCTTCCTAAG | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSSVSLP*LPHLPK Trigger: CTTAGGAAGATGGGGAAGGCACGGAAGAGAAACCGA...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGGGATGGAGCTGGGTTaGTCTGAGGGTTGGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLGMELG*SEGWPQ Trigger: CTGGGGCCAACCCTCAGAGCAACCCAGCTCCATCCC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGCTCCAGGCTTGCAGATaGCTGGAGACCAGTGTGTTG | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESELQACR*LETSVL Trigger: CAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAG...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAGGTTCTCTTGCAAATTaGTGTTCAGGGGGAAGGAGG | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSGSLAN*CSGGRR Trigger: CCTCCTTCCCCCTGAACACCAATTTGCAAGAGAACC...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACAACCTATGACCTGGGATaGAGCTGGGTTGCTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: GAFHQFLPVSERHCCLPTTYDLG*SWVALR Trigger: CCTCAGAGCAACCCAGCTCCATCCCAGGTCATAGGT...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | GTCACATATCAGCCGCTGGGACGTGAGGACCATCACTaGACTCCTGACTCCATTAGGCAGGCCATCACAAAA | + |
Preference number: 4 (lower is better) Translates to: VTYQPLGREDHH*TPDSIRQAITK Trigger: TTTTGTGATGGCCTGCCTAATGGAGTCAGGAGTCAAGTGATGGTCCTCACGTCCCAGCGGCTGATATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCATCTGATCCTGTGTCATaGACAAGGTCCTGTCCCTTA | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSSDPVS*TRSCPL Trigger: TAAGGGACAGGACCTTGTGCATGACACAGGATCAGA...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGAGGGGGAAGGAGGTCTaGAAAGTGAAGGTGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESERGKEV*KVKVSL Trigger: CAAGGACACCTTCACTTTGCAGACCTCCTTCCCCCT...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACAGCCACCTGGTTCTCTTaGAAATTGGTGTTCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: GAFHQFLPVSERHCCLPTATWFS*KLVFRG Trigger: CCCCCTGAACACCAATTTGCAAGAGAACCAGGTGGC...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCTACTTCGGTTGTTCTTaGTCTTTCGGTTTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVYFGCS*SFGFSS Trigger: GGAAGAGAAACCGAAAGACCAAGAACAACCGAAGTA...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGATACTGGTCGAGGGTGTaGAGGAAGTCGAGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRYWSRV*RKSRPG Trigger: CCCAGGCCTCGACTTCCTCCACACCCTCGACCAGTA...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGATTCCGACCCTGGAGCTaGCTCTCCGGATGGTACTGG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRFRPWS*LSGWYW Trigger: CCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAA...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGAGGCTTGCAGATGGCTaGAGACCAGTGTGTTGGACT | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESERLADG*RPVCWT Trigger: AGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCT...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGGCTGGCAAGCATGGTaGAGGTGGTGGGAACCTCCT | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLGWQAW*RWWEPP Trigger: AGGAGGTTCCCACCACCTCCACCATGCTTGCCAGCC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGTGGGCTGGCAAGCATaGTGGAGGTGGTGGGAACCT | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLVGWQA*WRWWEP Trigger: AGGTTCCCACCACCTCCACCATGCTTGCCAGCCCAC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGTTGGTGAGCCTGGCCTaGCTCTGTAGTGGGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLLVSLA*LCSGLA Trigger: TGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAA...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCATTGGTGAGCCTGGCCTaGCTCTGTAGTGGGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPLVSLA*LCSGLA Trigger: TGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAA...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCGATGTTACTGGGTGCTaGAGAAGAACTCACAGTTTT | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVDVTGC*RRTHSF Trigger: AAAACTGTGAGTTCTTCTCCAGCACCCAGTAACATC...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGGTTGCTCTGAGGGTTaGCCCCAGCCAGAAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRGCSEG*PQPEVG Trigger: CCCAACTTCTGGCTGGGGCCAACCCTCAGAGCAACC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATAGCCCAACAGTGGGGTaGCTAGGGGGAGAGAGAGTC | + |
Preference number: 4 (lower is better) Translates to: KREPKIGKEEYWITKGCYSPTVG*LGGERV Trigger: GACTCTCTCTCCCCCTAGCCACCCCACTGTTGGGCT...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR TCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACATGGAGTCCACCAACTTaGAGATGCCCTTCTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: GAFHQFLPVSERHCCLPTWSPPT*RCPSLS Trigger: AGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCA...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGGATGGTCTGCAGGGTaGCAGTGGAGCCAGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKGWSAG*QWSQAP Trigger: TGGGGCCTGGCTCCACTGTCACCCTGCAGACCATCC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR GCA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCACAGATAAATGGTGCTaGCTTTGCCATCTTTGGATT | + |
Preference number: 4 (lower is better) Translates to: ADSWADRSCRNPCVLAPVTDKWC*LCHLWI Trigger: AATCCAAAGATGGCAAAGGCAGCACCATTTATCTGT...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGCAGGTGTTTCTGTCTTaGAGAAGAGCCAGGAGGAAC | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESEQVFLS*RRARRN Trigger: GTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTG...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATTGGGGCCCCTTGGGTTaGCACCTGGTTCTCTTGCAA | + |
Preference number: 4 (lower is better) Translates to: KREPKIGKEEYWITKGCYWGPLG*HLVLLQ Trigger: TTGCAAGAGAACCAGGTGGCAACCCAAGGGGCCCCA...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGTGGGGCCCCTTGGGTTaGCACCTGGTTCTCTTGCAA | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLWGPLG*HLVLLQ Trigger: TTGCAAGAGAACCAGGTGGCAACCCAAGGGGCCCCA...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGCTTGCCCCACAGCTTaGACACAGCCTTGGAGTCCA | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRACPTA*TQPWSP Trigger: TGGACTCCAAGGCTGTGTCCAAGCTGTGGGGCAAGC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAGGTTGCTCTGAGGGTTaGCCCCAGCCAGAAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLGCSEG*PQPEVG Trigger: CCCAACTTCTGGCTGGGGCCAACCCTCAGAGCAACC...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR CCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATCCAGCACCTATGACCTaGGATGGAGCTGGGTTGCTC | + |
Preference number: 4 (lower is better) Translates to: KREPKIGKEEYWITKGCYPAPMT*DGAGLL Trigger: GAGCAACCCAGCTCCATCCCAGGTCATAGGTGCTGG...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGCCAGCACCTATGACCTaGGATGGAGCTGGGTTGCTC | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLPAPMT*DGAGLL Trigger: GAGCAACCCAGCTCCATCCCAGGTCATAGGTGCTGG...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
||
CDS-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAAGCCCAACAGTGGGGTaGCTAGGGGGAGAGAGAGTC | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLSPTVG*LGGERV Trigger: GACTCTCTCTCCCCCTAGCCACCCCACTGTTGGGCT...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | CTTTCAAGATTTACTCTCCAAGTGCTCCCCAACTTCTaGGGCCCTGCCACGATTGGGGAACTAAAGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: LSRFTLQVLPNF*GPATIGELKLG Trigger: GCCTAGCTTTAGTTCCCCAATCGTGGCAGGGCCCAAGAAGTTGGGGAGCACTTGGAGAGTAAATCTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | ACAAGTTCAAAGACCATGGACTCCTCGAAGAGTACCTaGGCATGGGGTGAGTGGGGAATATCAGAGAGGACC | + |
Preference number: 4 (lower is better) Translates to: TSSKTMDSSKST*AWGEWGISERT Trigger: GGTCCTCTCTGATATTCCCCACTCACCCCATGCCAAGGTACTCTTCGAGGAGTCCATGGTCTTTGAACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAAAATGGTGCTGCCTTTaGCATCTTTGGATTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSKWCCL*HLWISS Trigger: GGAAGAAATCCAAAGATGGCAAAGGCAGCACCATTT...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GGCAGAAATAAAAAGCAAAGAGCCACTGTGAGAGCGAGAGGGTGGGAGAGTGAGCCCACAGATAAATGGTaGTGCCTTTGCCATCTTTGG | + |
Preference number: 4 (lower is better) Translates to: GRNKKQRATVRARGWESEPTDKW*CLCHLW Trigger: CCAAAGATGGCAAAGGCAGCACCATTTATCTGTGGG...CTCACTCTCCCACCCTCTCGCTCTCACAGTGGCTCTTTGCTTTTTATTTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCCCTCGGGGGAGGCTCTaGTTCCGACCCTGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIPRGRL*FRPWSW Trigger: CCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGG...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAACCTATGACCTGGGATaGAGCTGGGTTGCTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPTYDLG*SWVALR Trigger: CCTCAGAGCAACCCAGCTCCATCCCAGGTCATAGGT...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | TTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTaGAAGGCCCTGGTCTGGTGCCAGATGCTTGAACTG | + |
Preference number: 4 (lower is better) Translates to: FSFQEHIYSLVL*KALVWCQMLEL Trigger: CAGTTCAAGCATCTGGCACCAGACCAGGGCCTTCAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAACACGGCTGGGAACACTaGAGGGTCTTCCAGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKHGWEH*RVFQLV Trigger: CACCAGCTGGAAGACCCTTCAGTGTTCCCAGCCGTG...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAAACTCACAGTTTTGGTaGGCCTGGCCTGGCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRNSQFW*AWPGSV Trigger: TACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGAACTCACAGTTTTGGTaGGCCTGGCCTGGCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLNSQFW*AWPGSV Trigger: TACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTT...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAACTGACCCAGCACCTATaGCCTGGGATGGAGCTGGGT | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKLTQHL*PGMELG Trigger: ACCCAGCTCCATCCCAGGTCATAGGTGCTGGGTCAG...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACAATGCCCTTCTCTCTCTaGGTCCACTTAATGTACTTG | + |
Preference number: 4 (lower is better) Translates to: GAFHQFLPVSERHCCLPTMPFSL*VHLMYL Trigger: CAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCAT...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAAGGGGGAAGGAGGTCTaGAAAGTGAAGGTGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRRGKEV*KVKVSL Trigger: CAAGGACACCTTCACTTTGCAGACCTCCTTCCCCCT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAGCCACCTGGTTCTCTTaGAAATTGGTGTTCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPATWFS*KLVFRG Trigger: CCCCCTGAACACCAATTTGCAAGAGAACCAGGTGGC...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGGCATCTCCTTGAACTaGTATACCAGCCTCTGCCCT | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRGISLN*YTSLCP Trigger: AGGGCAGAGGCTGGTATACCAGTTCAAGGAGATGCC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTACTGGTCGAGGGTGTaGAGGAAGTCGAGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSYWSRV*RKSRPG Trigger: CCCAGGCCTCGACTTCCTCCACACCCTCGACCAGTA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTACTCCAGGCTTGCAGATaGCTGGAGACCAGTGTGTTG | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLLQACR*LETSVL Trigger: CAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAG...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGTGGGCTGGCAAGCATaGTGGAGGTGGTGGGAACCT | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSVGWQA*WRWWEP Trigger: AGGTTCCCACCACCTCCACCATGCTTGCCAGCCCAC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGGCTCTGTAGTGGGCTaGCAAGCATGGTGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKGSVVG*QAWWRW Trigger: CCACCTCCACCATGCTTGCCAGCCCACTACAGAGCC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAGGGGCTACTCCTAGGTaGATGTTACTGGGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLGATPR*MLLGAG Trigger: TCCAGCACCCAGTAACATCCACCTAGGAGTAGCCCC...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGCCCCAGCCAGAAGTTaGGGGAGACCACTGAGGATC | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKAPARS*GRPLRI Trigger: GATCCTCAGTGGTCTCCCCCAACTTCTGGCTGGGGC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACACCTGACTCGGAAGTaGCTGAAGATGACCCTGATC | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRHLTRK*LKMTLI Trigger: GATCAGGGTCATCTTCAGCCACTTCCGAGTCAGGTG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAACAAGGCTCAGGTTATaGGAACCCCTTGAGAGCACC | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRTRLRL*EPLEST Trigger: GGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGT...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | TGTCCCTTAGCAGTGTCCTCTCAGCATATGCACCCATaGAAGTTCTCCTACCTAGACCTTTTCCAGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: CPLAVSSQHMHP*KFSYLDLFQLC Trigger: ACAGAGCTGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACTGCTAAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAGCACTTCCGGTGAGCTaGAGATCTGCTTCTCATCCA | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLALPVS*RSASHP Trigger: TGGATGAGAAGCAGATCTTCAGCTCACCGGAAGTGC...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCACTGTCAGCAAAATACTaGCTTCTAAAATCTGATCCT | + |
Preference number: 4 (lower is better) Translates to: ADQIWPQAASWLVDFPPSLSAKY*LLKSDP Trigger: AGGATCAGATTTTAGAAGGCAGTATTTTGCTGACAG...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCATTCTCCTCCTCAGAATaGTCCTTCTGGTCACCAGCA | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPFSSSE*SFWSPA Trigger: TGCTGGTGACCAGAAGGAGCATTCTGAGGAGGAGAA...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGATTCTCCTCCTCAGAATaGTCCTTCTGGTCACCAGCA | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRFSSSE*SFWSPA Trigger: TGCTGGTGACCAGAAGGAGCATTCTGAGGAGGAGAA...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGTCGGTTTCTCTTCCGTaGCTTCCCCATCTTCCTAAG | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLSVSLP*LPHLPK Trigger: CTTAGGAAGATGGGGAAGGCACGGAAGAGAAACCGA...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGAGTGTGTTGGACTTTTaGCTTCTCCCAGGGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLSVLDF*LLPGRV Trigger: AACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACT...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAAGGCTTGCAGATGGCTaGAGACCAGTGTGTTGGACT | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLRLADG*RPVCWT Trigger: AGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCT...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACCTTGGGTTGCCACCTaGTTCTCTTGCAAATTGGTG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRPWVAT*FSCKLV Trigger: CACCAATTTGCAAGAGAACCAGGTGGCAACCCAAGG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGGTGAGCTGAAGATCTaGTTCTCATCCAGGACATCA | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLGELKI*FSSRTS Trigger: TGATGTCCTGGATGAGAAGCAGATCTTCAGCTCACC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACCCACAGATAAATGGTaGTGCCTTTGCCATCTTTGG | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRPTDKW*CLCHLW Trigger: CCAAAGATGGCAAAGGCAGCACCATTTATCTGTGGG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAATGGTATACCAGCCTCTaGCCTTCCACTTTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKWYTSL*PSTLAR Trigger: CCTGGCCAAAGTGGAAGGGCAGAGGCTGGTATACCA...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGTGGATGTTACTGGGTaGTGGAGAAGAACTCACAGT | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLVDVTG*WRRTHS Trigger: ACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCAC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCGGCTCTGTAGTGGGCTaGCAAGCATGGTGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIGSVVG*QAWWRW Trigger: CCACCTCCACCATGCTTGCCAGCCCACTACAGAGCC...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACTAGGTGGATGTTACTaGGTGCTGGAGAAGAACTCA | + |
Preference number: 4 (lower is better) Translates to: EISSLEGQQNGGIMNRSRLGGCY*VLEKNS Trigger: TGAGTTCTTCTCCAGCACCCAGTAACATCCACCTAG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGGGGCTACTCCTAGGTaGATGTTACTGGGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSGATPR*MLLGAG Trigger: TCCAGCACCCAGTAACATCCACCTAGGAGTAGCCCC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATAAGAACGAGTTGAGTTaGAGCAGTAGTACTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: KREPKIGKEEYWITKGCYKNELS*SSSTGR Trigger: CCTGCCAGTACTACTGCTCCAACTCAACTCGTTCTT...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | CTTTGGTCAGAGCGATGTCAAATAGGCCTGGGGAACTaGGAATCAAATGTTCTCACACCCCACGAGATAGAA | + |
Preference number: 4 (lower is better) Translates to: LWSERCQIGLGN*ESNVLTPHEIE Trigger: TTCTATCTCGTGGGGTGTGAGAACATTTGATTCCAAGTTCCCCAGGCCTATTTGACATCGCTCTGACCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTATCTGATCCTGTGTCATaGACAAGGTCCTGTCCCTTA | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLSDPVS*TRSCPL Trigger: TAAGGGACAGGACCTTGTGCATGACACAGGATCAGA...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAACTCCCACAGATAAATaGTGCTGCCTTTGCCATCTT | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPTPTDK*CCLCHL Trigger: AAGATGGCAAAGGCAGCACCATTTATCTGTGGGAGT...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGGCATCTCCTTGAACTaGTATACCAGCCTCTGCCCT | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSGISLN*YTSLCP Trigger: AGGGCAGAGGCTGGTATACCAGTTCAAGGAGATGCC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAACACCTGACTCGGAAGTaGCTGAAGATGACCCTGATC | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKHLTRK*LKMTLI Trigger: GATCAGGGTCATCTTCAGCCACTTCCGAGTCAGGTG...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTACAAGGCTCAGGTTATaGGAACCCCTTGAGAGCACC | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSTRLRL*EPLEST Trigger: GGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAATGGAGTCCACCAACTTaGAGATGCCCTTCTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKWSPPT*RCPSLS Trigger: AGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCA...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAATGCCCTTCTCTCTCTaGGTCCACTTAATGTACTTG | + |
Preference number: 4 (lower is better) Translates to: VFLLSPTMVLTYMASCPLMPFSL*VHLMYL Trigger: CAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCAT...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCTGGTATACCAGCCTCTaGCCTTCCACTTTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIWYTSL*PSTLAR Trigger: CCTGGCCAAAGTGGAAGGGCAGAGGCTGGTATACCA...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCCAAGCATGGTGGAGGTaGTGGGAACCTCCTCATCCA | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIQAWWR*WEPPHP Trigger: TGGATGAGGAGGTTCCCACCACCTCCACCATGCTTG...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAGATGTTACTGGGTGCTaGAGAAGAACTCACAGTTTT | + |
Preference number: 4 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPDVTGC*RRTHSF Trigger: AAAACTGTGAGTTCTTCTCCAGCACCCAGTAACATC...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTCCTTGGGTTGCCACCTaGTTCTCTTGCAAATTGGTG | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSPWVAT*FSCKLV Trigger: CACCAATTTGCAAGAGAACCAGGTGGCAACCCAAGG...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGACAGATAAATGGTGCTaGCTTTGCCATCTTTGGATT | + |
Preference number: 4 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLTDKWC*LCHLWI Trigger: AATCCAAAGATGGCAAAGGCAGCACCATTTATCTGT...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGTGGATGTTACTGGGTaGTGGAGAAGAACTCACAGT | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSVDVTG*WRRTHS Trigger: ACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCAC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTCAGAATGCTCCTTCTaGTCACCAGCATCACTTGTC | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSECSF*SPASLV Trigger: GACAAGTGATGCTGGTGACCAGAAGGAGCATTCTGA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAATCAGAATGCTCCTTCTaGTCACCAGCATCACTTGTC | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKSECSF*SPASLV Trigger: GACAAGTGATGCTGGTGACCAGAAGGAGCATTCTGA...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAAAGAACGAGTTGAGTTaGAGCAGTAGTACTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKKNELS*SSSTGR Trigger: CCTGCCAGTACTACTGCTCCAACTCAACTCGTTCTT...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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3UTR CAA 72 bp | AGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATaGTCAAGCATAGGGCTGATTTTATACAAACAGCCA | + |
Preference number: 4 (lower is better) Translates to: REGRVLDHKGLL*SSIGLILYKQP Trigger: TGGCTGTTTGTATAAAATCAGCCCTATGCTTGACAATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR TCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCAGGGTCAGTGACAGGTaGGGTACTTCGGTTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSIRVSDR*GTSVVL Trigger: AAGAACAACCGAAGTACCTCACCTGTCACTGACCCT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTCTTATGATGCCATTGTaGACCTCATCCAGATCCAGT | + |
Preference number: 4 (lower is better) Translates to: RLASLTLWVRKKLNKKLSLMMPL*TSSRSS Trigger: ACTGGATCTGGATGAGGTCCACAATGGCATCATAAG...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAACTTATGATGCCATTGTaGACCTCATCCAGATCCAGT | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKLMMPL*TSSRSS Trigger: ACTGGATCTGGATGAGGTCCACAATGGCATCATAAG...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR GCA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAAAATGGTGCTGCCTTTaGCATCTTTGGATTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: SAERLRSGELFPETEKRKKWCCL*HLWISS Trigger: GGAAGAAATCCAAAGATGGCAAAGGCAGCACCATTT...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CCA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCACTCCCACAGATAAATaGTGCTGCCTTTGCCATCTT | + |
Preference number: 4 (lower is better) Translates to: VTSLRIKGKNWLFPLNSITPTDK*CCLCHL Trigger: AAGATGGCAAAGGCAGCACCATTTATCTGTGGGAGT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS GCA 90 bp | CTGGCAGGAGGCCCATTGGTCAGCACCGTAGTCAGCGGGATGGTCTaGAGGGTGACAGTGGAGCCAGGCCCCACAGGGGCTACTCCTAGG | + |
Preference number: 5 (lower is better) Translates to: LAGGPLVSTVVSGMV*RVTVEPGPTGATPR Trigger: CCTAGGAGTAGCCCCTGTGGGGCCTGGCTCCACTGTCACCCTGCAGACCATCCCGCTGACTACGGTGCTGACCAATGGGCCTCCTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 90 bp | CCTCGGGGGAGGCTCTGGTTCCGACCCTGGAGCTGGCTCTCCGGATaGTACTGGTCGAGGGTGTGGAGGAAGTCGAGGCCTGGGAAGAGT | + |
Preference number: 5 (lower is better) Translates to: PRGRLWFRPWSWLSG*YWSRVWRKSRPGKS Trigger: ACTCTTCCCAGGCCTCGACTTCCTCCACACCCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 90 bp | GGGAGGCTCTGGTTCCGACCCTGGAGCTGGCTCTCCGGATGGTACTaGTCGAGGGTGTGGAGGAAGTCGAGGCCTGGGAAGAGTCTTCTG | + |
Preference number: 5 (lower is better) Translates to: GRLWFRPWSWLSGWY*SRVWRKSRPGKSLL Trigger: CAGAAGACTCTTCCCAGGCCTCGACTTCCTCCACACCCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 90 bp | GGTTATCCTTGTCCTCGGGGGAGGCTCTGGTTCCGACCCTGGAGCTaGCTCTCCGGATGGTACTGGTCGAGGGTGTGGAGGAAGTCGAGG | + |
Preference number: 5 (lower is better) Translates to: GYPCPRGRLWFRPWS*LSGWYWSRVWRKSR Trigger: CCTCGACTTCCTCCACACCCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGGACAAGGATAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 90 bp | TTGGCTTCTCCCAGGGAGGGTTATCCTTGTCCTCGGGGGAGGCTCTaGTTCCGACCCTGGAGCTGGCTCTCCGGATGGTACTGGTCGAGG | + |
Preference number: 5 (lower is better) Translates to: LASPREGYPCPRGRL*FRPWSWLSGWYWSR Trigger: CCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 90 bp | TTCCGACCCTGGAGCTGGCTCTCCGGATGGTACTGGTCGAGGGTGTaGAGGAAGTCGAGGCCTGGGAAGAGTCTTCTGGTGTCTCAGGGC | + |
Preference number: 5 (lower is better) Translates to: FRPWSWLSGWYWSRV*RKSRPGKSLLVSQG Trigger: GCCCTGAGACACCAGAAGACTCTTCCCAGGCCTCGACTTCCTCCACACCCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 90 bp | AAAGGCAGCAATCACAGTCCCAGGGGGCTGAGAGCTAGGCCCTGCTaGCCCAGCACCTATGACCTGGGATGGAGCTGGGTTGCTCTGAGG | + |
Preference number: 5 (lower is better) Translates to: KGSNHSPRGLRARPC*PSTYDLGWSWVALR Trigger: CCTCAGAGCAACCCAGCTCCATCCCAGGTCATAGGTGCTGGGTCAGCAGGGCCTAGCTCTCAGCCCCCTGGGACTGTGATTGCTGCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCAGGGAGGGTTATCCTaGTCCTCGGGGGAGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: ADSWADRSCRNPCVLAPVQGGLS*SSGEAL Trigger: CAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | CCACTGGAAGTCCTGATAAAGGCAGCAATCACAGTCCCAGGGGGCTaGGAGCTAGGCCCTGCTGACCCAGCACCTATGACCTGGGATGGA | + |
Preference number: 5 (lower is better) Translates to: PLEVLIKAAITVPGG*ELGPADPAPMTWDG Trigger: TCCATCCCAGGTCATAGGTGCTGGGTCAGCAGGGCCTAGCTCTCAGCCCCCTGGGACTGTGATTGCTGCCTTTATCAGGACTTCCAGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | CTAGGTGGATGTTACTGGGTGCTGGAGAAGAACTCACAGTTTTGGTaGGCCTGGCCTGGCTCTGTAGTGGGCTGGCAAGCATGGTGGAGG | + |
Preference number: 5 (lower is better) Translates to: LGGCYWVLEKNSQFW*AWPGSVVGWQAWWR Trigger: CCTCCACCATGCTTGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCACCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 90 bp | GACAATCCTAACTCCAGGCTTGCAGATGGCTGGAGACCAGTGTGTTaGACTTTTGGCTTCTCCCAGGGAGGGTTATCCTTGTCCTCGGGG | + |
Preference number: 5 (lower is better) Translates to: DNPNSRLADGWRPVC*TFGFSQGGLSLSSG Trigger: CCCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAGTTAGGATTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCCATCCATCCCGTTGCTaGCAAACTCGAAGACCAGAT | + |
Preference number: 5 (lower is better) Translates to: ADSWADRSCRNPCVLAPVHPSRC*QTRRPD Trigger: ATCTGGTCTTCGAGTTTGCAAGCAACGGGATGGATG...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GCAGACTCATGGGCTGACAGGAGCTGTAGGAACCCATGTGTGCTCGCTCCTGTCTTGGAGTCCACCAACTaGAAGATGCCCTTCTCTCTC | + |
Preference number: 5 (lower is better) Translates to: ADSWADRSCRNPCVLAPVLESTN*KMPFSL Trigger: GAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAA...GACAGGAGCGAGCACACATGGGTTCCTACAGCTCCTGTCAGCCCATGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | AGAGAGAGTCTGGTTCCCCACAAGGCTCAGGTTATGGGAACCCCTTaGGAGCACCTGACTCGGAAGTGGCTGAAGATGACCCTGATCTCT | + |
Preference number: 5 (lower is better) Translates to: RESLVPHKAQVMGTP*EHLTRKWLKMTLIS Trigger: AGAGATCAGGGTCATCTTCAGCCACTTCCGAGTCAGGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGTGGGGAACCAGACTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 90 bp | ACTGGTCGAGGGTGTGGAGGAAGTCGAGGCCTGGGAAGAGTCTTCTaGTGTCTCAGGGCTCTCTTCTTCATCATCAATCACCACCAAGTC | + |
Preference number: 5 (lower is better) Translates to: TGRGCGGSRGLGRVF*CLRALFFIINHHQV Trigger: GACTTGGTGGTGATTGATGATGAAGAAGAGAGCCCTGAGACACCAGAAGACTCTTCCCAGGCCTCGACTTCCTCCACACCCTCGACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAGCAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAA | + |
Preference number: 5 (lower is better) Translates to: ADQIWPQAASWLVDFPPSAGVSV*QKSQEE Trigger: TTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGC...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 90 bp | ACCTCCTCATCCACAGACAATCCTAACTCCAGGCTTGCAGATGGCTaGAGACCAGTGTGTTGGACTTTTGGCTTCTCCCAGGGAGGGTTA | + |
Preference number: 5 (lower is better) Translates to: TSSSTDNPNSRLADG*RPVCWTFGFSQGGL Trigger: TAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAGTTAGGATTGTCTGTGGATGAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCACATCCATCCCGTTGCTaGCAAACTCGAAGACCAGAT | + |
Preference number: 5 (lower is better) Translates to: ADQIWPQAASWLVDFPPSHPSRC*QTRRPD Trigger: ATCTGGTCTTCGAGTTTGCAAGCAACGGGATGGATG...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGACAGGGAGGGTTATCCTaGTCCTCGGGGGAGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: EISSLEGQQNGGIMNRSRQGGLS*SSGEAL Trigger: CAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTG...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGATCAGTGGGGCCCCTaGGGTTGCCACCTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLDQWGP*GCHLVL Trigger: GAGAACCAGGTGGCAACCCAAGGGGCCCCACTGATC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | GTTCAGGGGGAAGGAGGTCTGCAAAGTGAAGGTGTCCTTGAATGTTaGCACCTGCGGGACACTCTGAAGAACGAGTTGAGTTGGAGCAGT | + |
Preference number: 5 (lower is better) Translates to: VQGEGGLQSEGVLEC*HLRDTLKNELSWSS Trigger: ACTGCTCCAACTCAACTCGTTCTTCAGAGTGTCCCGCAGGTGTCAACATTCAAGGACACCTTCACTTTGCAGACCTCCTTCCCCCTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | TCAGGTTCAGGGGTAGAGAGCAGGAAGTTGGGTAGATTGATGGCCTaGACAGAGTTGGAGTCTGAAAGCACTTCCGGTGAGCTGAAGATC | + |
Preference number: 5 (lower is better) Translates to: SGSGVESRKLGRLMA*TELESESTSGELKI Trigger: GATCTTCAGCTCACCGGAAGTGCTTTCAGACTCCAACTCTGTTCAGGCCATCAATCTACCCAACTTCCTGCTCTCTACCCCTGAACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS GCA 90 bp | GACACAGCCTTGGAGTCCACCAACTTGAAGATGCCCTTCTCTCTCTaGGTCCACTTAATGTACTTGGGGCAGGTGTTTCTGTCTTGCAGA | + |
Preference number: 5 (lower is better) Translates to: DTALESTNLKMPFSL*VHLMYLGQVFLSCR Trigger: TCTGCAAGACAGAAACACCTGCCCCAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAAGGCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | GCTGACCAGATCTGGCCACAAGCTGCTTCCTGGCTTGTGGATTTCCCTCCATCAGGCCAGGATTCCTCTTaGATAATAATATCTCAGGGC | + |
Preference number: 5 (lower is better) Translates to: ADQIWPQAASWLVDFPPSGQDSS*IIISQG Trigger: GCCCTGAGATATTATTATCAAAGAGGAATCCTGGCC...TGATGGAGGGAAATCCACAAGCCAGGAAGCAGCTTGTGGCCAGATCTGGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACACTGCCTTTGCCATCTTaGGATTTCTTCCGTATAGGC | + |
Preference number: 5 (lower is better) Translates to: GAFHQFLPVSERHCCLPTLPLPS*DFFRIG Trigger: GCCTATACGGAAGAAATCCAAAGATGGCAAAGGCAG...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATGAAGAACTCACAGTTTaGGTGAGCCTGGCCTGGCTC | + |
Preference number: 5 (lower is better) Translates to: KREPKIGKEEYWITKGCYEELTV*VSLAWL Trigger: GAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTC...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGATCAGTGGGGCCCCTaGGGTTGCCACCTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: SAERLRSGELFPETEKRKDQWGP*GCHLVL Trigger: GAGAACCAGGTGGCAACCCAAGGGGCCCCACTGATC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCAAGCTTGGACACAGCCTaGGAGTCCACCAACTTGAAG | + |
Preference number: 5 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPSLDTA*ESTNLK Trigger: CTTCAAGTTGGTGGACTCCAAGGCTGTGTCCAAGCT...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GGGGCATTCCACCAGTTCCTTCCAGTCTCAGAAAGGCATTGTTGCTTGCCAACAGGCCAGGATTCCTCTTaGATAATAATATCTCAGGGC | + |
Preference number: 5 (lower is better) Translates to: GAFHQFLPVSERHCCLPTGQDSS*IIISQG Trigger: GCCCTGAGATATTATTATCAAAGAGGAATCCTGGCC...TGTTGGCAAGCAACAATGCCTTTCTGAGACTGGAAGGAACTGGTGGAATGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGATGCCACCTGGTTCTCTaGCAAATTGGTGTTCAGGGG | + |
Preference number: 5 (lower is better) Translates to: EISSLEGQQNGGIMNRSRCHLVL*QIGVQG Trigger: CCCCTGAACACCAATTTGCAAGAGAACCAGGTGGCA...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | AGTGTCCTCTCAGCATATGCACCCATTGAAGTTCTCCTACCTAGACCTTTTCCATGCCACCTGGTTCTCTaGCAAATTGGTGTTCAGGGG | + |
Preference number: 5 (lower is better) Translates to: SVLSAYAPIEVLLPRPFPCHLVL*QIGVQG Trigger: CCCCTGAACACCAATTTGCAAGAGAACCAGGTGGCA...TGGAAAAGGTCTAGGTAGGAGAACTTCAATGGGTGCATATGCTGAGAGGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | CTTCTAAAATCTGATCCTGTGTCATGCACAAGGTCCTGTCCCTTATaGTGCCATTGTGGACCTCATCCAGATCCAGTCCTGAGCACAGAT | + |
Preference number: 5 (lower is better) Translates to: LLKSDPVSCTRSCPL*CHCGPHPDPVLSTD Trigger: ATCTGTGCTCAGGACTGGATCTGGATGAGGTCCACAATGGCATCATAAGGGACAGGACCTTGTGCATGACACAGGATCAGATTTTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 90 bp | ATCTTTGGATTTCTTCCGTATAGGCATGCTAGGGTCAGTGACAGGTaGGGTACTTCGGTTGTTCTTGGTCTTTCGGTTTCTCTTCCGTGC | + |
Preference number: 5 (lower is better) Translates to: IFGFLPYRHARVSDR*GTSVVLGLSVSLPC Trigger: GCACGGAAGAGAAACCGAAAGACCAAGAACAACCGAAGTACCTCACCTGTCACTGACCCTAGCATGCCTATACGGAAGAAATCCAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGTCCCTTATGATGCCATaGTGGACCTCATCCAGATCC | + |
Preference number: 5 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLSLMMP*WTSSRS Trigger: GGATCTGGATGAGGTCCACAATGGCATCATAAGGGA...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATTTGGAGTCCACCAACTaGAAGATGCCCTTCTCTCTC | + |
Preference number: 5 (lower is better) Translates to: KREPKIGKEEYWITKGCYLESTN*KMPFSL Trigger: GAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAA...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAAGCTTGGACACAGCCTaGGAGTCCACCAACTTGAAG | + |
Preference number: 5 (lower is better) Translates to: VFLLSPTMVLTYMASCPLSLDTA*ESTNLK Trigger: CTTCAAGTTGGTGGACTCCAAGGCTGTGTCCAAGCT...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | AAGAGGGAACCCAAGATAGGGAAGGAAGAGTACTGGATCACAAAGGGCTGTTATGGTGAGGTACTTCGGTaGTTCTTGGTCTTTCGGTTT | + |
Preference number: 5 (lower is better) Translates to: KREPKIGKEEYWITKGCYGEVLR*FLVFRF Trigger: AAACCGAAAGACCAAGAACAACCGAAGTACCTCACC...ATAACAGCCCTTTGTGATCCAGTACTCTTCCTTCCCTATCTTGGGTTCCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CACCAAGTCAGCTCATTTTCATTCCAAGAGCACATCTACTCCCTAGTGCTCTTGGGTGAGGTACTTCGGTaGTTCTTGGTCTTTCGGTTT | + |
Preference number: 5 (lower is better) Translates to: HQVSSFSFQEHIYSLVLLGEVLR*FLVFRF Trigger: AAACCGAAAGACCAAGAACAACCGAAGTACCTCACC...CAAGAGCACTAGGGAGTAGATGTGCTCTTGGAATGAAAATGAGCTGACTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGAAGAACTCACAGTTTaGGTGAGCCTGGCCTGGCTC | + |
Preference number: 5 (lower is better) Translates to: SAERLRSGELFPETEKRKEELTV*VSLAWL Trigger: GAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGGTTATGGGAACCCCTaGAGAGCACCTGACTCGGAA | + |
Preference number: 5 (lower is better) Translates to: RLASLTLWVRKKLNKKLSGYGNP*RAPDSE Trigger: TTCCGAGTCAGGTGCTCTCAAGGGGTTCCCATAACC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GAGATTTCCAGTCTAGAAGGTCAGCAGAATGGTGGCATCATGAACAGAAGCAGAGTACTTCGGTTGTTCTaGGTCTTTCGGTTTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: EISSLEGQQNGGIMNRSRVLRLF*VFRFLF Trigger: GAAGAGAAACCGAAAGACCAAGAACAACCGAAGTAC...TCTGCTTCTGTTCATGATGCCACCATTCTGCTGACCTTCTAGACTGGAAATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGCAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAA | + |
Preference number: 5 (lower is better) Translates to: RLASLTLWVRKKLNKKLSAGVSV*QKSQEE Trigger: TTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTTCCCTTATGATGCCATaGTGGACCTCATCCAGATCC | + |
Preference number: 5 (lower is better) Translates to: RLASLTLWVRKKLNKKLSSLMMP*WTSSRS Trigger: GGATCTGGATGAGGTCCACAATGGCATCATAAGGGA...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GTGTTCCTTCTCTCTCCCACTATGGTTTTAACATACATGGCCTCTTGTCCCTTAGTACTTCGGTTGTTCTaGGTCTTTCGGTTTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: VFLLSPTMVLTYMASCPLVLRLF*VFRFLF Trigger: GAAGAGAAACCGAAAGACCAAGAACAACCGAAGTAC...TAAGGGACAAGAGGCCATGTATGTTAAAACCATAGTGGGAGAGAGAAGGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 90 bp | GTGGATACATCATCATCTGTCAGCAAAATACTGCCTTCTAAAATCTaGTCCTGTGTCATGCACAAGGTCCTGTCCCTTATGATGCCATTG | + |
Preference number: 5 (lower is better) Translates to: VDTSSSVSKILPSKI*SCVMHKVLSLMMPL Trigger: CAATGGCATCATAAGGGACAGGACCTTGTGCATGACACAGGATCAGATTTTAGAAGGCAGTATTTTGCTGACAGATGATGATGTATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS-3UTR CAA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAATATCATCCATCCCGTaGCTTGCAAACTCGAAGACC | + |
Preference number: 5 (lower is better) Translates to: SAERLRSGELFPETEKRKISSIP*LANSKT Trigger: GGTCTTCGAGTTTGCAAGCAACGGGATGGATGATAT...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | TCTGCTGAGAGACTAAGATCAGGAGAGCTCTTTCCAGAAACAGAAAAGAGAAAAGTCCACTTAATGTACTaGGGGCAGGTGTTTCTGTCT | + |
Preference number: 5 (lower is better) Translates to: SAERLRSGELFPETEKRKVHLMY*GQVFLS Trigger: AGACAGAAACACCTGCCCCAAGTACATTAAGTGGAC...TTTTCTCTTTTCTGTTTCTGGAAAGAGCTCTCCTGATCTTAGTCTCTCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTGTCCACTTAATGTACTaGGGGCAGGTGTTTCTGTCT | + |
Preference number: 5 (lower is better) Translates to: RLASLTLWVRKKLNKKLSVHLMY*GQVFLS Trigger: AGACAGAAACACCTGCCCCAAGTACATTAAGTGGAC...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | CGGTTAGCTAGTTTAACACTCTGGGTAAGGAAGAAACTGAACAAGAAGTTGTCTACTCTGAAGAACGAGTaGAGTTGGAGCAGTAGTACT | + |
Preference number: 5 (lower is better) Translates to: RLASLTLWVRKKLNKKLSTLKNE*SWSSST Trigger: AGTACTACTGCTCCAACTCAACTCGTTCTTCAGAGT...AGACAACTTCTTGTTCAGTTTCTTCCTTACCCAGAGTGTTAAACTAGCTAACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS-3UTR CAA 90 bp | GTTACAAGTTTAAGAATTAAAGGTAAGAACTGGCTGTTCCCACTCAATTCCATCACTCTGAAGAACGAGTaGAGTTGGAGCAGTAGTACT | + |
Preference number: 5 (lower is better) Translates to: VTSLRIKGKNWLFPLNSITLKNE*SWSSST Trigger: AGTACTACTGCTCCAACTCAACTCGTTCTTCAGAGT...GATGGAATTGAGTGGGAACAGCCAGTTCTTACCTTTAATTCTTAAACTTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 72 bp | CCCAGGGAGGGTTATCCTTGTCCTCGGGGGAGGCTCTaGTTCCGACCCTGGAGCTGGCTCTCCGGATGGTAC | + |
Preference number: 6 (lower is better) Translates to: PREGYPCPRGRL*FRPWSWLSGWY Trigger: GTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | AGGCTCTGGTTCCGACCCTGGAGCTGGCTCTCCGGATaGTACTGGTCGAGGGTGTGGAGGAAGTCGAGGCCT | + |
Preference number: 6 (lower is better) Translates to: RLWFRPWSWLSG*YWSRVWRKSRP Trigger: AGGCCTCGACTTCCTCCACACCCTCGACCAGTACCATCCGGAGAGCCAGCTCCAGGGTCGGAACCAGAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | GCCTGGCCTGGCTCTGTAGTGGGCTGGCAAGCATGGTaGAGGTGGTGGGAACCTCCTCATCCACAGACAATC | + |
Preference number: 6 (lower is better) Translates to: AWPGSVVGWQAW*RWWEPPHPQTI Trigger: GATTGTCTGTGGATGAGGAGGTTCCCACCACCTCCACCATGCTTGCCAGCCCACTACAGAGCCAGGCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | CCCAGCCAGAAGTTGGGGGAGACCACTGAGGATCAGTaGGGCCCCTTGGGTTGCCACCTGGTTCTCTTGCAA | + |
Preference number: 6 (lower is better) Translates to: PSQKLGETTEDQ*GPLGCHLVLLQ Trigger: TTGCAAGAGAACCAGGTGGCAACCCAAGGGGCCCCACTGATCCTCAGTGGTCTCCCCCAACTTCTGGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 90 bp | AGACCAGTGTGTTGGACTTTTGGCTTCTCCCAGGGAGGGTTATCCTaGTCCTCGGGGGAGGCTCTGGTTCCGACCCTGGAGCTGGCTCTC | + |
Preference number: 6 (lower is better) Translates to: RPVCWTFGFSQGGLS*SSGEALVPTLELAL Trigger: GAGAGCCAGCTCCAGGGTCGGAACCAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | GTCCTGATAAAGGCAGCAATCACAGTCCCAGGGGGCTaGGAGCTAGGCCCTGCTGACCCAGCACCTATGACC | + |
Preference number: 6 (lower is better) Translates to: VLIKAAITVPGG*ELGPADPAPMT Trigger: GGTCATAGGTGCTGGGTCAGCAGGGCCTAGCTCTCAGCCCCCTGGGACTGTGATTGCTGCCTTTATCAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 72 bp | CTCCACGGGTGCCCCAGTAACCACACCCTGCACATATaGAGAGGACCTCAAGGGCCCCTCCTTTACCACAGG | + |
Preference number: 6 (lower is better) Translates to: LHGCPSNHTLHI*RGPQGPLLYHR Trigger: CCTGTGGTAAAGGAGGGGCCCTTGAGGTCCTCTTCATATGTGCAGGGTGTGGTTACTGGGGCACCCGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 72 bp | TGTTGGACTTTTGGCTTCTCCCAGGGAGGGTTATCCTaGTCCTCGGGGGAGGCTCTGGTTCCGACCCTGGAG | + |
Preference number: 6 (lower is better) Translates to: CWTFGFSQGGLS*SSGEALVPTLE Trigger: CTCCAGGGTCGGAACCAGAGCCTCCCCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | CTAACTCCAGGCTTGCAGATGGCTGGAGACCAGTGTGTTGGACTTTaGGCTTCTCCCAGGGAGGGTTATCCTTGTCCTCGGGGGAGGCTC | + |
Preference number: 6 (lower is better) Translates to: LTPGLQMAGDQCVGL*ASPREGYPCPRGRL Trigger: GAGCCTCCCCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAGTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | CTGGTTCCCCACAAGGCTCAGGTTATGGGAACCCCTTaGGAGCACCTGACTCGGAAGTGGCTGAAGATGACC | + |
Preference number: 6 (lower is better) Translates to: LVPHKAQVMGTP*EHLTRKWLKMT Trigger: GGTCATCTTCAGCCACTTCCGAGTCAGGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGTGGGGAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 72 bp | GCTTGCAGATGGCTGGAGACCAGTGTGTTGGACTTTTaGCTTCTCCCAGGGAGGGTTATCCTTGTCCTCGGG | + |
Preference number: 6 (lower is better) Translates to: ACRWLETSVLDF*LLPGRVILVLG Trigger: CCCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | CCTGGCTCTGTAGTGGGCTGGCAAGCATGGTGGAGGTaGTGGGAACCTCCTCATCCACAGACAATCCTAACT | + |
Preference number: 6 (lower is better) Translates to: PGSVVGWQAWWR*WEPPHPQTILT Trigger: AGTTAGGATTGTCTGTGGATGAGGAGGTTCCCACCACCTCCACCATGCTTGCCAGCCCACTACAGAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | ACAGTGGAGCCAGGCCCCACAGGGGCTACTCCTAGGTaGATGTTACTGGGTGCTGGAGAAGAACTCACAGTT | + |
Preference number: 6 (lower is better) Translates to: TVEPGPTGATPR*MLLGAGEELTV Trigger: AACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCACCTAGGAGTAGCCCCTGTGGGGCCTGGCTCCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 72 bp | GGCTTGCAGATGGCTGGAGACCAGTGTGTTGGACTTTaGGCTTCTCCCAGGGAGGGTTATCCTTGTCCTCGG | + |
Preference number: 6 (lower is better) Translates to: GLQMAGDQCVGL*ASPREGYPCPR Trigger: CCGAGGACAAGGATAACCCTCCCTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | ACTCCTAGGTGGATGTTACTGGGTGCTGGAGAAGAACTCACAGTTTaGGTGAGCCTGGCCTGGCTCTGTAGTGGGCTGGCAAGCATGGTG | + |
Preference number: 6 (lower is better) Translates to: TPRWMLLGAGEELTV*VSLAWLCSGLASMV Trigger: CACCATGCTTGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCACCTAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 90 bp | GAGAGAGAGTCTGGTTCCCCACAAGGCTCAGGTTATGGGAACCCCTaGAGAGCACCTGACTCGGAAGTGGCTGAAGATGACCCTGATCTC | + |
Preference number: 6 (lower is better) Translates to: ERESGSPQGSGYGNP*RAPDSEVAEDDPDL Trigger: GAGATCAGGGTCATCTTCAGCCACTTCCGAGTCAGGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGTGGGGAACCAGACTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 72 bp | ATAGGGGACCTGTTCCACGATCACGGCTGGGAACACTaGAGGGTCTTCCAGCTGGTGGATATCATCCATCCC | + |
Preference number: 6 (lower is better) Translates to: IGDLFHDHGWEH*RVFQLVDIIHP Trigger: GGGATGGATGATATCCACCAGCTGGAAGACCCTTCAGTGTTCCCAGCCGTGATCGTGGAACAGGTCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | TGTTACTGGGTGCTGGAGAAGAACTCACAGTTTTGGTaGGCCTGGCCTGGCTCTGTAGTGGGCTGGCAAGCA | + |
Preference number: 6 (lower is better) Translates to: CYWVLEKNSQFW*AWPGSVVGWQA Trigger: TGCTTGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTCTCCAGCACCCAGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 72 bp | TGGATGTTACTGGGTGCTGGAGAAGAACTCACAGTTTaGGTGAGCCTGGCCTGGCTCTGTAGTGGGCTGGCA | + |
Preference number: 6 (lower is better) Translates to: WMLLGAGEELTV*VSLAWLCSGLA Trigger: TGCCAGCCCACTACAGAGCCAGGCCAGGCTCACCAAAACTGTGAGTTCTTCTCCAGCACCCAGTAACATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 72 bp | TCTGGTTCCCCACAAGGCTCAGGTTATGGGAACCCCTaGAGAGCACCTGACTCGGAAGTGGCTGAAGATGAC | + |
Preference number: 6 (lower is better) Translates to: SGSPQGSGYGNP*RAPDSEVAEDD Trigger: GTCATCTTCAGCCACTTCCGAGTCAGGTGCTCTCAAGGGGTTCCCATAACCTGAGCCTTGTGGGGAACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CAA 90 bp | AGGTGGTGGGAACCTCCTCATCCACAGACAATCCTAACTCCAGGCTaGCAGATGGCTGGAGACCAGTGTGTTGGACTTTTGGCTTCTCCC | + |
Preference number: 6 (lower is better) Translates to: RWWEPPHPQTILTPG*QMAGDQCVGLLASP Trigger: GGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAGTTAGGATTGTCTGTGGATGAGGAGGTTCCCACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | AGAGGACCTCAAGGGCCCCTCCTTTACCACAGGCACTaGTGTGCCACTGGAAGTCCTGATAAAGGCAGCAAT | + |
Preference number: 6 (lower is better) Translates to: RGPQGPLLYHRH*CATGSPDKGSN Trigger: ATTGCTGCCTTTATCAGGACTTCCAGTGGCACATCAGTGCCTGTGGTAAAGGAGGGGCCCTTGAGGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS CCA 72 bp | GGGTGTGGAGGAAGTCGAGGCCTGGGAAGAGTCTTCTaGTGTCTCAGGGCTCTCTTCTTCATCATCAATCAC | + |
Preference number: 6 (lower is better) Translates to: GCGGSRGLGRVF*CLRALFFIINH Trigger: GTGATTGATGATGAAGAAGAGAGCCCTGAGACACCAGAAGACTCTTCCCAGGCCTCGACTTCCTCCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | GGTCTTCCAGCTGGTGGATATCATCCATCCCGTTGCTaGCAAACTCGAAGACCAGATCACTGGGCTGCAGAG | + |
Preference number: 6 (lower is better) Translates to: GLPAGGYHPSRC*QTRRPDHWAAE Trigger: CTCTGCAGCCCAGTGATCTGGTCTTCGAGTTTGCAAGCAACGGGATGGATGATATCCACCAGCTGGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | GAAGGGTCTTCCAGCTGGTGGATATCATCCATCCCGTaGCTTGCAAACTCGAAGACCAGATCACTGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: EGSSSWWISSIP*LANSKTRSLGC Trigger: GCAGCCCAGTGATCTGGTCTTCGAGTTTGCAAGCAACGGGATGGATGATATCCACCAGCTGGAAGACCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | CCCCACAGCTTGGACACAGCCTTGGAGTCCACCAACTaGAAGATGCCCTTCTCTCTCTGCGTCCACTTAATG | + |
Preference number: 6 (lower is better) Translates to: PHSLDTALESTN*KMPFSLCVHLM Trigger: CATTAAGTGGACGCAGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAAGGCTGTGTCCAAGCTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | TTCTGCTTGCCCCACAGCTTGGACACAGCCTTGGAGTCCACCAACTaGAAGATGCCCTTCTCTCTCTGCGTCCACTTAATGTACTTGGGG | + |
Preference number: 6 (lower is better) Translates to: FCLPHSLDTALESTN*KMPFSLCVHLMYLG Trigger: CCCCAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAAGGCTGTGTCCAAGCTGTGGGGCAAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CCA 72 bp | TCCACAGACAATCCTAACTCCAGGCTTGCAGATGGCTaGAGACCAGTGTGTTGGACTTTTGGCTTCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: STDNPNSRLADG*RPVCWTFGFSQ Trigger: CTGGGAGAAGCCAAAAGTCCAACACACTGGTCTCCAGCCATCTGCAAGCCTGGAGTTAGGATTGTCTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | GGCATGCTAGGGTCAGTGACAGGTGAGGTACTTCGGTaGTTCTTGGTCTTTCGGTTTCTCTTCCGTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: GMLGSVTGEVLR*FLVFRFLFRAF Trigger: GAAGGCACGGAAGAGAAACCGAAAGACCAAGAACAACCGAAGTACCTCACCTGTCACTGACCCTAGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | GGGAACACTGAAGGGTCTTCCAGCTGGTGGATATCATCCATCCCGTaGCTTGCAAACTCGAAGACCAGATCACTGGGCTGCAGAGCAATA | + |
Preference number: 6 (lower is better) Translates to: GNTEGSSSWWISSIP*LANSKTRSLGCRAI Trigger: TATTGCTCTGCAGCCCAGTGATCTGGTCTTCGAGTTTGCAAGCAACGGGATGGATGATATCCACCAGCTGGAAGACCCTTCAGTGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | CTCTCTCTGCGTCCACTTAATGTACTTGGGGCAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAACTCCCACAGATAAATGGTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: LSLRPLNVLGAGVSV*QKSQEELPQINGAA Trigger: GGCAGCACCATTTATCTGTGGGAGTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGCCCCAAGTACATTAAGTGGACGCAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | TTCCGTATAGGCATGCTAGGGTCAGTGACAGGTGAGGTACTTCGGTaGTTCTTGGTCTTTCGGTTTCTCTTCCGTGCCTTCCCCATCTTC | + |
Preference number: 6 (lower is better) Translates to: FRIGMLGSVTGEVLR*FLVFRFLFRAFPIF Trigger: GAAGATGGGGAAGGCACGGAAGAGAAACCGAAAGACCAAGAACAACCGAAGTACCTCACCTGTCACTGACCCTAGCATGCCTATACGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | ACCAACTTGAAGATGCCCTTCTCTCTCTGCGTCCACTTAATGTACTaGGGGCAGGTGTTTCTGTCTTGCAGAAGAGCCAGGAGGAACTCC | + |
Preference number: 6 (lower is better) Translates to: TNLKMPFSLCVHLMY*GQVFLSCRRARRNS Trigger: GGAGTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGCCCCAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCATCTTCAAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | TCTGATCCTGTGTCATGCACAAGGTCCTGTCCCTTATaGTGCCATTGTGGACCTCATCCAGATCCAGTCCTG | + |
Preference number: 6 (lower is better) Translates to: SDPVSCTRSCPL*CHCGPHPDPVL Trigger: CAGGACTGGATCTGGATGAGGTCCACAATGGCATCATAAGGGACAGGACCTTGTGCATGACACAGGATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | GAACAGAGTTGGAGTCTGAAAGCACTTCCGGTGAGCTaGAGATCTGCTTCTCATCCAGGACATCACTGGGAG | + |
Preference number: 6 (lower is better) Translates to: EQSWSLKALPVS*RSASHPGHHWE Trigger: CTCCCAGTGATGTCCTGGATGAGAAGCAGATCTTCAGCTCACCGGAAGTGCTTTCAGACTCCAACTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS GCA 72 bp | TTGGAGTCTGAAAGCACTTCCGGTGAGCTGAAGATCTaGTTCTCATCCAGGACATCACTGGGAGTTGCCACA | + |
Preference number: 6 (lower is better) Translates to: LESESTSGELKI*FSSRTSLGVAT Trigger: TGTGGCAACTCCCAGTGATGTCCTGGATGAGAAGCAGATCTTCAGCTCACCGGAAGTGCTTTCAGACTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | AAGATGCCCTTCTCTCTCTGCGTCCACTTAATGTACTaGGGGCAGGTGTTTCTGTCTTGCAGAAGAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: KMPFSLCVHLMY*GQVFLSCRRAR Trigger: CCTGGCTCTTCTGCAAGACAGAAACACCTGCCCCAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | GAAGGAGGTCTGCAAAGTGAAGGTGTCCTTGAATGTTaGCACCTGCGGGACACTCTGAAGAACGAGTTGAGT | + |
Preference number: 6 (lower is better) Translates to: EGGLQSEGVLEC*HLRDTLKNELS Trigger: ACTCAACTCGTTCTTCAGAGTGTCCCGCAGGTGTCAACATTCAAGGACACCTTCACTTTGCAGACCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS GCA 72 bp | TTGGAGTCCACCAACTTGAAGATGCCCTTCTCTCTCTaGGTCCACTTAATGTACTTGGGGCAGGTGTTTCTG | + |
Preference number: 6 (lower is better) Translates to: LESTNLKMPFSL*VHLMYLGQVFL Trigger: CAGAAACACCTGCCCCAAGTACATTAAGTGGACGCAGAGAGAGAAGGGCATCTTCAAGTTGGTGGACTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS GCA 72 bp | TTCTCTTGCAAATTGGTGTTCAGGGGGAAGGAGGTCTaGAAAGTGAAGGTGTCCTTGAATGTTGACACCTGC | + |
Preference number: 6 (lower is better) Translates to: FSCKLVFRGKEV*KVKVSLNVDTC Trigger: GCAGGTGTCAACATTCAAGGACACCTTCACTTTGCAGACCTCCTTCCCCCTGAACACCAATTTGCAAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 |
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CDS TCA 72 bp | GCTTCTCATCCAGGACATCACTGGGAGTTGCCACATTaGATAGGACTTCAGTGGATGACACGTTATTTGAGG | + |
Preference number: 6 (lower is better) Translates to: ASHPGHHWELPH*IGLQWMTRYLR Trigger: CCTCAAATAACGTGTCATCCACTGAAGTCCTATTCAATGTGGCAACTCCCAGTGATGTCCTGGATGAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS TCA 72 bp | TTTCTTCCGTATAGGCATGCTAGGGTCAGTGACAGGTaGGGTACTTCGGTTGTTCTTGGTCTTTCGGTTTCT | + |
Preference number: 6 (lower is better) Translates to: FLPYRHARVSDR*GTSVVLGLSVS Trigger: AGAAACCGAAAGACCAAGAACAACCGAAGTACCTCACCTGTCACTGACCCTAGCATGCCTATACGGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 90 bp | CTGAAGATCTGCTTCTCATCCAGGACATCACTGGGAGTTGCCACATaGAATAGGACTTCAGTGGATGACACGTTATTTGAGGTGGATACA | + |
Preference number: 6 (lower is better) Translates to: LKICFSSRTSLGVAT*NRTSVDDTLFEVDT Trigger: TGTATCCACCTCAAATAACGTGTCATCCACTGAAGTCCTATTCAATGTGGCAACTCCCAGTGATGTCCTGGATGAGAAGCAGATCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |
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CDS CAA 72 bp | TGCTTCTCATCCAGGACATCACTGGGAGTTGCCACATaGAATAGGACTTCAGTGGATGACACGTTATTTGAG | + |
Preference number: 6 (lower is better) Translates to: CFSSRTSLGVAT*NRTSVDDTLFE Trigger: CTCAAATAACGTGTCATCCACTGAAGTCCTATTCAATGTGGCAACTCCCAGTGATGTCCTGGATGAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033429.9 ENSMUST00000114958.8 ENSMUST00000140486.2 |