Pregenerated sensors for ELF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037174Ensembl transcript IDs: ENSMUST00000062009.14, ENSMUST00000091144.11, ENSMUST00000108051.8, ENSMUST00000108053.9, ENSMUST00000163748.8, ENSMUST00000183338.7, ENSMUST00000183463.8, ENSMUST00000184677.7, ENSMUST00000194641.6, ENSMUST00000195432.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAGGTGTGACGGGAAACAAACTGAACGGAAGCAACTCAGTACCTaGGAGGTGCTAGGCCAGACCCAGGGGCCAGGCCAGACCCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: KRCDGKQTERKQLST*EVLGQTQGPGQTQG Trigger: CCCCTGGGTCTGGCCTGGCCCCTGGGTCTGGCCTAGCACCTCCCAGGTACTGAGTTGCTTCCGTTCAGTTTGTTTCCCGTCACACCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR TCA 90 bp | CTCCATTTTCAGTGGAGGCCGGCATCACGGTCGGGACTGTCTGGATaGCTACTTTTGGAGAGCTGGCCGAGGCTGGACTGGTGCTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: LHFQWRPASRSGLSG*LLLESWPRLDWCWL Trigger: TAACCAGCACCAGTCCAGCCTCGGCCAGCTCTCCAAAAGTAGTCATCCAGACAGTCCCGACCGTGATGCCGGCCTCCACTGAAAATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR GCA 90 bp | TGGCTGCAGGACTGGGAAGATAGCTCAGTGTTTAAGAGCACTGGCTaGCCTTCCAGGACTGGGATACAATTCCCAGCATCCACATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WLQDWEDSSVFKSTG*PSRTGIQFPASTWQ Trigger: CTGCCATGTGGATGCTGGGAATTGTATCCCAGTCCTGGAAGGGCAGCCAGTGCTCTTAAACACTGAGCTATCTTCCCAGTCCTGCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR TCA 90 bp | GCTGAAGTGAGATCCTCTGTAGCAAAGGGTCCAGCCTGGGGTCTCTaGAGCTGTACACGGCCATCTGGAGAGAATGCTGAAAAGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: AEVRSSVAKGPAWGL*SCTRPSGENAEKSP Trigger: AGGTGACTTTTCAGCATTCTCTCCAGATGGCCGTGTACAGCTTCAGAGACCCCAGGCTGGACCCTTTGCTACAGAGGATCTCACTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR TCA 90 bp | AGCTTGTGGAATGAGACCTGGAGAGACGGTTTAGCAGTGGAGTGGTaGCCGCACTTTCAGAAGAGCAGGTTCAAAACGCCAAGCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: SLWNETWRDGLAVEW*PHFQKSRFKTPSTA Trigger: AGCTGTGCTTGGCGTTTTGAACCTGCTCTTCTGAAAGTGCGGTCACCACTCCACTGCTAAACCGTCTCTCCAGGTCTCATTCCACAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR GCA 90 bp | AGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGACTCCCCAGTaGTGGGATTTAAAGGTGTGCACTACCACCACCCAGTTAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: RLASNSEICLPLTPQ*WDLKVCTTTTQLTS Trigger: AGAAGTTAACTGGGTGGTGGTAGTGCACACCTTTAAATCCCAGCACTGGGGAGTCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR GCA 90 bp | TCACGACGGAATCCCTTTAATAAAACATTCAGTAGAGCCTGCTTGTaGACGCGCACTAACTCCTCCCATCCCTTCTACACTGGTAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: SRRNPFNKTFSRACL*TRTNSSHPFYTGKP Trigger: GGGCTTACCAGTGTAGAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATTCCGTCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR GCA 90 bp | CAGCCTTCACGACGGAATCCCTTTAATAAAACATTCAGTAGAGCCTaGTTGTGCACGCGCACTAACTCCTCCCATCCCTTCTACACTGGT | + |
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Preference number: 1 (lower is better) Translates to: QPSRRNPFNKTFSRA*LCTRTNSSHPFYTG Trigger: ACCAGTGTAGAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATTCCGTCGTGAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR TCA 90 bp | CATTTCTTCAGGCAGTCATTAAGAAAACACCAGACTTCTGTGGCCTaGCTGAAACGACAGCCTGGGCTGGCTTGTGAGCATTGTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: HFFRQSLRKHQTSVA*LKRQPGLACEHCEK Trigger: TTTTTCACAATGCTCACAAGCCAGCCCAGGCTGTCGTTTCAGTCAGGCCACAGAAGTCTGGTGTTTTCTTAATGACTGCCTGAAGAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR CCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTaGGAAGATAGCTCAGTGTTTAAGAGCACTGGCTGCCCTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ECIGFLIQLKRWLQD*EDSSVFKSTGCPSR Trigger: CCTGGAAGGGCAGCCAGTGCTCTTAAACACTGAGCTATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGACAACCCTGACAGTCTaGAGTGCCCGCCCGGAACGT | + |
|
Preference number: 2 (lower is better) Translates to: RRTDTDVSADSRATRVTQTTLTV*SARPER Trigger: ACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | CCACAGCTCTCTACCCATAAAAGGTGTGACGGGAAACAAACTGAACGGAAGCAACCAGACCCAGGGGCCTaGACATGCCAGGCACGCCGC | + |
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Preference number: 2 (lower is better) Translates to: PQLSTHKRCDGKQTERKQPDPGA*TCQARR Trigger: GCGGCGTGCCTGGCATGTGCAGGCCCCTGGGTCTGG...TTGCTTCCGTTCAGTTTGTTTCCCGTCACACCTTTTATGGGTAGAGAGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGAAGCAACTCAGTACCTaGGAGGTGCTAGGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: RRTDTDVSADSRATRVTQKQLST*EVLGQT Trigger: GGTCTGGCCTAGCACCTCCCAGGTACTGAGTTGCTT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGGCTACACAGCCAGAGGAGTGGAGGCAGGCACGCACAAGAACATACCATAAGGCCTGGAGAGGCTaGAAATGCATCAAGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: TWATQPEEWRQARTRTYHKAWRG*KCIKPW Trigger: CCATGGCTTGATGCATTTCCAGCCTCTCCAGGCCTT...ATGGTATGTTCTTGTGCGTGCCTGCCTCCACTCCTCTGGCTGTGTAGCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTACAACCCTGACAGTCTaGAGTGCCCGCCCGGAACGT | + |
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Preference number: 2 (lower is better) Translates to: MSNDRRTDTDVSADSRATTTLTV*SARPER Trigger: ACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGT...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGATAGCACCAGTTAAGTaGGCACTGCCCAAGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: RRTDTDVSADSRATRVTQIAPVK*ALPKHS Trigger: ACTGTGCTTGGGCAGTGCTCACTTAACTGGTGCTAT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGACAAACACCAGGCACTaGAGCTACCTGGCAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: RRTDTDVSADSRATRVTQTNTRH*SYLASS Trigger: TGAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTCCTTCAGTCTTCACCTGTACAGTCACCTGTACAGGCCAGGCCACAGCTAAGCGCACTAGATCTTaGTCTCCTCTGTGTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SGPSVFTCTVTCTGQATAKRTRS*SPLCEA Trigger: AGCTTCACACAGAGGAGAGCAAGATCTAGTGCGCTT...AGCTGTGGCCTGGCCTGTACAGGTGACTGTACAGGTGAAGACTGAAGGACCAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCGCACTAGCTTCCTGGAATCACAGCACTCTAGAGTCTGAGGCAGAAAGACTAAGGCACAAGATTTaGTGGGGAGGCGAGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FGALASWNHSTLESEAERLRHKI*WGGEGE Trigger: TTCACCCTCGCCTCCCCATCAAATCTTGTGCCTTAG...TCTTTCTGCCTCAGACTCTAGAGTGCTGTGATTCCAGGAAGCTAGTGCGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGATAATCTTGGCAGGCTaGATGGTGATTCTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RRTDTDVSADSRATRVTQIILAG*MVILSP Trigger: TGGAGACAGAATCACCATGCAGCCTGCCAAGATTAT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGAGCATGCAGTGCTCTCAACCCCTCAACTATCTCTCCAACTCCCTTTAAACAGCTCACAACCATCTaGAACTCCCGTCCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TRACSALNPSTISPTPFKQLTTI*NSRPRG Trigger: TCCTCTGGGACGGGAGTTCCAGATGGTTGTGAGCTG...TTTAAAGGGAGTTGGAGAGATAGTTGAGGGGTTGAGAGCACTGCATGCTCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTCCTGGAATCACAGCACTCTAGAGTCTGAGGCAGAAAGACGATGTGTTACTGGTGACCTTCAATaGGCACTGCAGGTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LASWNHSTLESEAERRCVTGDLQ*ALQVGF Trigger: GAAGCCAACCTGCAGTGCTCATTGAAGGTCACCAGT...AACACATCGTCTTTCTGCCTCAGACTCTAGAGTGCTGTGATTCCAGGAAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR CCA 90 bp | ACGAGAGCATGCAGTGCTCTCAACCCCTCAACTATCTCTCCAACTCCCTTTAAATTCCCAGCATCCACATaGCAGCTCACAACCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRACSALNPSTISPTPFKFPAST*QLTTIW Trigger: CCAGATGGTTGTGAGCTGCCATGTGGATGCTGGGAA...TTTAAAGGGAGTTGGAGAGATAGTTGAGGGGTTGAGAGCACTGCATGCTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR-3UTR CCA 90 bp | ACGAGAGCATGCAGTGCTCTCAACCCCTCAACTATCTCTCCAACTCCCTTTAAACTGCCCTTCCAGGACTaGGATACAATTCCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TRACSALNPSTISPTPFKLPFQD*DTIPSI Trigger: GATGCTGGGAATTGTATCCCAGTCCTGGAAGGGCAG...TTTAAAGGGAGTTGGAGAGATAGTTGAGGGGTTGAGAGCACTGCATGCTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR CAA 90 bp | CCTTCACGACGGAATCCCTTTAATAAAACATTCAGTAGAGCCTGCTaGTGCACGCGCACTAACTCCTCCCATCCCTTCTACACTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: PSRRNPFNKTFSRAC*CTRTNSSHPFYTGK Trigger: CTTACCAGTGTAGAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATTCCGTCGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | CCATTTTCAGTGGAGGCCGGCATCACGGTCGGGACTGTCTGGATGACTACTTTTATTACTGCTGTGAACTaGTGCTTCCATCTTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PFSVEAGITVGTVWMTTFITAVN*CFHLLN Trigger: GTTCAGAAGATGGAAGCATCAGTTCACAGCAGTAAT...AAAAGTAGTCATCCAGACAGTCCCGACCGTGATGCCGGCCTCCACTGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACACAACCCTGACAGTCTaGAGTGCCCGCCCGGAACGT | + |
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Preference number: 2 (lower is better) Translates to: HLLPVRLIAFFYAQLCENTTLTV*SARPER Trigger: ACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGT...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTAAGCGCACTAGATCTTaGTCTCCTCTGTGTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: MSNDRRTDTDVSADSRATKRTRS*SPLCEA Trigger: AGCTTCACACAGAGGAGAGCAAGATCTAGTGCGCTT...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGCACACGGGACACAGACATGTAGGCAGGCAAAGACCTATACACATAAATCAAACTCAGAAATCTaGCTGCCTCTGACTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RHAHGTQTCRQAKTYTHKSNSEI*LPLTPQ Trigger: CTGGGGAGTCAGAGGCAGGCAGATTTCTGAGTTTGA...TTTATGTGTATAGGTCTTTGCCTGCCTACATGTCTGTGTCCCGTGTGCATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR CAA 90 bp | GCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCCTCTGGCTTTCTaGATGACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: AFFYAQLCENPPLAF*MTSLQMSVRTTLTV Trigger: GACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAAAGCCAGAGGAGGGTTCTCACACAACTGTGCATAGAAGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTGATGCTTCCATCTTCTaGACATTTCAGCAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: MSNDRRTDTDVSADSRATDASIF*TFQQTQ Trigger: CTGTGTCTGCTGAAATGTTCAGAAGATGGAAGCATC...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCAGTTAAGTGAGCACTaGCCAAGCACAGTGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: MSNDRRTDTDVSADSRATQLSEH*PSTVLI Trigger: AATTAGCACTGTGCTTGGGCAGTGCTCACTTAACTG...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTGTCATCAGCAGCTGCTaGCAAGTCTTCAGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPVISSC*QVFRAG Trigger: ACCTGCCCTGAAGACTTGGCAGCAGCTGCTGATGAC...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGCACACGGGACACAGACATGTAGGCAGGCAAAGACCTATACACATAAATGGGATTTAAAGGTGTaGACTACCACCACCCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RHAHGTQTCRQAKTYTHKWDLKV*TTTTQL Trigger: TAACTGGGTGGTGGTAGTGCACACCTTTAAATCCCA...TTTATGTGTATAGGTCTTTGCCTGCCTACATGTCTGTGTCCCGTGTGCATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAAATGATGTTATGTGTGTGCACATTTTCGGCTGGCATGCACTGTGTGCCTTTAAGAGCACTGGCTaGCCTTCCAGGACTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: KKNDVMCVHIFGWHALCAFKSTG*PSRTGI Trigger: TATCCCAGTCCTGGAAGGGCAGCCAGTGCTCTTAAA...GGCACACAGTGCATGCCAGCCGAAAATGTGCACACACATAACATCATTTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTCCTGGAATCACAGCACTCTAGAGTCTGAGGCAGAAAGACGATGTGTTTACTTCCAGTACGTCTaGTTGCTTTCTTCTATGCAC | + |
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Preference number: 2 (lower is better) Translates to: LASWNHSTLESEAERRCVYFQYV*LLSSMH Trigger: GTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTA...AACACATCGTCTTTCTGCCTCAGACTCTAGAGTGCTGTGATTCCAGGAAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTATAGCACCAGTTAAGTaGGCACTGCCCAAGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPIAPVK*ALPKHS Trigger: ACTGTGCTTGGGCAGTGCTCACTTAACTGGTGCTAT...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTCCTGGAATCACAGCACTCTAGAGTCTGAGGCAGAAAGACGATGTGTTTGTATAGGTCCATTATaGTTGGCCAATTTCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: LASWNHSTLESEAERRCVCIGPL*LANFLT Trigger: GGTCAGGAAATTGGCCAATCATAATGGACCTATACA...AACACATCGTCTTTCTGCCTCAGACTCTAGAGTGCTGTGATTCCAGGAAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | ACACAACATCTGCAGGCACATCAAAGTAAATTAGGTGTAAAAATGTCGTGTGGAAACCATCTAGTGACCTaGCCTCTCTCCAGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TQHLQAHQSKLGVKMSCGNHLVT*PLSSLL Trigger: GAGGAGGCTGGAGAGAGGTCAGGTCACTAGATGGTT...TCCACACGACATTTTTACACCTAATTTACTTTGATGTGCCTGCAGATGTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCAAAGGCCTGGAGAGGCTGGAAATGCATCAAGCCATGGTTTTGTGGCTTAGAGTTCTAATCAGCTaGATGCAGAAGAAAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: QCKGLERLEMHQAMVLWLRVLIS*MQKKVS Trigger: AGATACTTTCTTCTGCATTCAGCTGATTAGAACTCT...AAGCCACAAAACCATGGCTTGATGCATTTCCAGCCTCTCCAGGCCTTTGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCGCACTAGCTTCCTGGAATCACAGCACTCTAGAGTCTGAGGCAGAAAGAGTAGAAAATACTGAATaGCTGTTAACTACTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FGALASWNHSTLESEAERVENTE*LLTTGP Trigger: TGGCCCAGTAGTTAACAGTCATTCAGTATTTTCTAC...TCTTTCTGCCTCAGACTCTAGAGTGCTGTGATTCCAGGAAGCTAGTGCGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCCTTCGAGACAGCCTTTaGGTCCACAAGTTTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: KKGEKGNKHQALELPGKFLRDSL*VHKFEY Trigger: ATATTCAAACTTGTGGACTCAAAGGCTGTCTCGAAG...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCTCAGGCTTTTCTTATTaGGGGTTCAGTTGTTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: KKGEKGNKHQALELPGKFSGFSY*GFSCSY Trigger: GTAAGAACAACTGAACCCTCAATAAGAAAAGCCTGA...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| 3UTR-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTTGCTCTCCTCTGTGTaGAGCTTTTGGATCCACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPLLSSV*SFWIHS Trigger: TGAGTGGATCCAAAAGCTTCACACAGAGGAGAGCAA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR TCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCTTGAGTCCACAAGTTTaGATATGCCCTTTTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KKGEKGNKHQALELPGKFLSPQV*ICPFLS Trigger: AGAGAGAAAAGGGCATATTCAAACTTGTGGACTCAA...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCTCCAGTACGTCTGATTaGTTTCTTCTATGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KKGEKGNKHQALELPGKFSSTSD*FLLCTV Trigger: AACTGTGCATAGAAGAAAGCAATCAGACGTACTGGA...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTAAGCGCACTAGATCTTaGTCTCCTCTGTGTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPKRTRS*SPLCEA Trigger: AGCTTCACACAGAGGAGAGCAAGATCTAGTGCGCTT...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGAACTCTAGAAGTAACTCCTTTGCATCAACAGCTTACTTCTCTATTCTCAAAATCTGCCTGCCTCTaGCTCCCCAGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LRTLEVTPLHQQLTSLFSKSACL*LPSAGI Trigger: AATCCCAGCACTGGGGAGTCAGAGGCAGGCAGATTT...TGAGAATAGAGAAGTAAGCTGTTGATGCAAAGGAGTTACTTCTAGAGTTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCAGTTAAGTGAGCACTaGCCAAGCACAGTGCTAATT | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPQLSEH*PSTVLI Trigger: AATTAGCACTGTGCTTGGGCAGTGCTCACTTAACTG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTACTTCCAGTACGTCTaGTTGCTTTCTTCTATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPYFQYV*LLSSMH Trigger: GTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTACAGTGAGCATTACTaGTGTGAACTGATGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPYSEHY*CELMLP Trigger: TGGAAGCATCAGTTCACAGCAGTAATGCTCACTGTA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAGCCATGTTGACAGCCAACCTCCTTTTCATACTTTTAGGTACTTAAAGAAAAGATGGCTGCAGGACTaGGAAGATAGCTCAGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: DSHVDSQPPFHTFRYLKKRWLQD*EDSSVF Trigger: AAACACTGAGCTATCTTCCCAGTCCTGCAGCCATCT...TTTCTTTAAGTACCTAAAAGTATGAAAAGGAGGTTGGCTGTCAACATGGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTCCAGTACGTCTGATTaGTTTCTTCTATGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLPVRLIAFFYAQLCENPSSTSD*FLLCTV Trigger: AACTGTGCATAGAAGAAAGCAATCAGACGTACTGGA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGAACTCTAGAAGTAACTCCTTTGCATCAACAGCTTACTTCTCTATTCTCACTGACTCCCCAGTGCTaGGATTTAAAGGTGTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LRTLEVTPLHQQLTSLFSLTPQC*DLKVCT Trigger: AGTGCACACCTTTAAATCCCAGCACTGGGGAGTCAG...TGAGAATAGAGAAGTAAGCTGTTGATGCAAAGGAGTTACTTCTAGAGTTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACACGAGTAAATGACATTAGGACAGCCATGTTGACAGCCAACCTCCTTTTCAAAAATACCACACCTTaGAGAATGCATTGGATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NTRVNDIRTAMLTANLLFKNTTP*RMHWIP Trigger: AGGAATCCAATGCATTCTTCAAGGTGTGGTATTTTT...GAAAAGGAGGTTGGCTGTCAACATGGCTGTCCTAATGTCATTTACTCGTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACAACATCTGCAGGCACATCAAAGTAAATTAGGTGTAAAAATGTCGTGTGGAGCTTTTCTCCAAAAATaGTGGACACAAGATGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TQHLQAHQSKLGVKMSCGAFLQK*WTQDGN Trigger: GTTTCCATCTTGTGTCCAGCATTTTTGGAGAAAAGC...TCCACACGACATTTTTACACCTAATTTACTTTGATGTGCCTGCAGATGTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR CCA 72 bp | GACGGGAAACAAACTGAACGGAAGCAACTCAGTACCTaGGAGGTGCTAGGCCAGACCCAGGGGCCAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DGKQTERKQLST*EVLGQTQGPGQ Trigger: CTGGCCTGGCCCCTGGGTCTGGCCTAGCACCTCCCAGGTACTGAGTTGCTTCCGTTCAGTTTGTTTCCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | CTTCCTGACCCCGTCAGGTTTGACTTTGCCTGGAGTTaGCACTGTGCGAGCTGGGTGGCGGGGATGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: LPDPVRFDFAWS*HCASWVAGMVI Trigger: TATCACCATCCCCGCCACCCAGCTCGCACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR CCA 72 bp | GAGGGCATCGGATCCTCTAGAACTGGAGCCACCATGTaGGTGGGTGCTGAGAACCAAACCAAGGTCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EGIGSSRTGATM*VGAENQTKVLH Trigger: GTGGAGGACCTTGGTTTGGTTCTCAGCACCCACCCACATGGTGGCTCCAGTTCTAGAGGATCCGATGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR CCA 72 bp | AGATTTGATGGGGAGGCGAGGGTGAAGGTAAGTGGGTaGAGACACGGCTCATGGGTTAGGGCTGCTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RFDGEARVKVSG*RHGSWVRAAPA Trigger: TGCAGGAGCAGCCCTAACCCATGAGCCGTGTCTCCACCCACTTACCTTCACCCTCGCCTCCCCATCAAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | ATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTaGCGCAGGTATGGTACAGTAAAGGGCCGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: IPMCLQTAGRLE*RRYGTVKGRSQ Trigger: TTGGCTCCGGCCCTTTACTGTACCATACCTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR CCA 72 bp | CCCGTCCCAGAGGATCCGATCCTTTTCTGGCACCCATaGATATCAGGCATGCACACGGGACACAGACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: PVPEDPILFWHP*ISGMHTGHRHV Trigger: TACATGTCTGTGTCCCGTGTGCATGCCTGATATCCATGGGTGCCAGAAAAGGATCGGATCCTCTGGGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR CCA 72 bp | CCTTCCAGGACTGGGATACAATTCCCAGCATCCACATaGCAGCTCACAACCATCTGGAACTCCCGTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSRTGIQFPAST*QLTTIWNSRPR Trigger: TCTGGGACGGGAGTTCCAGATGGTTGTGAGCTGCCATGTGGATGCTGGGAATTGTATCCCAGTCCTGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR TCA 72 bp | AGGAGGCACCTCTTTCCGAGACACAAGGATGGTTGCTaGAGTGAGATCCTCTGTAGCAAAGGGTCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRHLFPRHKDGC*SEILCSKGSSL Trigger: CAGGCTGGACCCTTTGCTACAGAGGATCTCACTTCAGCAACCATCCTTGTGTCTCGGAAAGAGGTGCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR CCA 72 bp | CAATTCCCAGCATCCACATGGCAGCTCACAACCATCTaGAACTCCCGTCCCAGAGGATCCGATCCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QFPASTWQLTTI*NSRPRGSDPFL Trigger: CAGAAAAGGATCGGATCCTCTGGGACGGGAGTTCCAGATGGTTGTGAGCTGCCATGTGGATGCTGGGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR GCA 72 bp | GAGAACCAAACCAAGGTCCTCCACGAGAGCATGCAGTaGTCTCAACCCCTCAACTATCTCTCCAACTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ENQTKVLHESMQ*SQPLNYLSNSL Trigger: AAGGGAGTTGGAGAGATAGTTGAGGGGTTGAGAGCACTGCATGCTCTCGTGGAGGACCTTGGTTTGGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR GCA 72 bp | GCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTaGCCGCCCGGAACGTGCTTATTTATTTCTCACACG | + |
|
Preference number: 3 (lower is better) Translates to: ANVCQDNPDSLQ*PPGTCLFISHT Trigger: CGTGTGAGAAATAAATAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR CCA 72 bp | TGTTTTCTGACAACCTGGGCTACACAGCCAGAGGAGTaGAGGCAGGCACGCACAAGAACATACCATCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: CFLTTWATQPEE*RQARTRTYHQQ Trigger: CTGTTGATGGTATGTTCTTGTGCGTGCCTGCCTCCACTCCTCTGGCTGTGTAGCCCAGGTTGTCAGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | CCATTTTCAGTGGAGGCCGGCATCACGGTCGGGACTGTCTGGATGACTACTTTTAGTGTAGTGAGCTGCTaGGTCCCTTTCAGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PFSVEAGITVGTVWMTTFSVVSC*VPFRLF Trigger: GAAAAGCCTGAAAGGGACCAAGCAGCTCACTACACT...AAAAGTAGTCATCCAGACAGTCCCGACCGTGATGCCGGCCTCCACTGAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR TCA 72 bp | AGGCAGTCATTAAGAAAACACCAGACTTCTGTGGCCTaGCTGAAACGACAGCCTGGGCTGGCTTGTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RQSLRKHQTSVA*LKRQPGLACEH Trigger: ATGCTCACAAGCCAGCCCAGGCTGTCGTTTCAGTCAGGCCACAGAAGTCTGGTGTTTTCTTAATGACTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | AATGAGACCTGGAGAGACGGTTTAGCAGTGGAGTGGTaGCCGCACTTTCAGAAGAGCAGGTTCAAAACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NETWRDGLAVEW*PHFQKSRFKTP Trigger: TGGCGTTTTGAACCTGCTCTTCTGAAAGTGCGGTCACCACTCCACTGCTAAACCGTCTCTCCAGGTCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR GCA 72 bp | TCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTaGAGTGCCCGCCCGGAACGTGCTTATTTATTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLQMSVRTTLTV*SARPERAYLFL Trigger: GAGAAATAAATAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR CCA 72 bp | GGCAGGCACGCACAAGAACATACCATCAACAGGACTTaGGAGAATGGCCAGATGTGCATGATGTGTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRHAQEHTINRT*ENGQMCMMCLR Trigger: TCTCAGACACATCATGCACATCTGGCCATTCTCCCAAGTCCTGTTGATGGTATGTTCTTGTGCGTGCCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGTTCTTGATGACTTCCTaGCAAATGTCTGTCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: RRTDTDVSADSRATRVTQFLMTS*QMSVRT Trigger: TGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAA...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGAGTAAACACAGACCGTTCATCACAGTGCAAAGGCCTGGAGAGGCTGGATTATCATTCAGGGGGTaGAAGTCCGAAAGCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LRSKHRPFITVQRPGEAGLSFRG*KSESWS Trigger: ACTCCAGCTTTCGGACTTCAACCCCCTGAATGATAA...TCCAGCCTCTCCAGGCCTTTGCACTGTGATGAACGGTCTGTGTTTACTCCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR GCA 72 bp | GCACCTTTAGCTGTTAACCAAAGTCTGTGTATGTTCTaGGTGGCTCAGGACGCAGAGAGAGCATGGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: APLAVNQSLCMF*VAQDAERAWTF Trigger: AAAGGTCCATGCTCTCTCTGCGTCCTGAGCCACGCAGAACATACACAGACTTTGGTTAACAGCTAAAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR GCA 72 bp | CGACGGAATCCCTTTAATAAAACATTCAGTAGAGCCTaGTTGTGCACGCGCACTAACTCCTCCCATCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRNPFNKTFSRA*LCTRTNSSHPF Trigger: GAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATTCCGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTCCTTCAGTCTTCACCTGTACAGTCACCTGTACAGGCCAGGCCACAGCTTTATTGAGGGTTCAGTaGTTCTTACTTAAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPSVFTCTVTCTGQATALLRVQ*FLLKRQ Trigger: CTGCCTCTTAAGTAAGAACAACTGAACCCTCAATAA...AGCTGTGGCCTGGCCTGTACAGGTGACTGTACAGGTGAAGACTGAAGGACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTTTCTTGATGACTTCCTaGCAAATGTCTGTCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: MSNDRRTDTDVSADSRATFLMTS*QMSVRT Trigger: TGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAA...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR GCA 72 bp | GTTCATCACAGTGCAAAGGCCTGGAGAGGCTGGAAATaGATCAAGCCATGGTTTTGTGGCTTTTCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VHHSAKAWRGWK*IKPWFCGFSPK Trigger: TTTTGGAGAAAAGCCACAAAACCATGGCTTGATGCATTTCCAGCCTCTCCAGGCCTTTGCACTGTGATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTACTCGTTCTAAAGACTaGTCATCAGCAGCTGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLPVRLIAFFYAQLCENPTRSKD*SSAAAA Trigger: GGCAGCAGCTGCTGATGACAAGTCTTTAGAACGAGT...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR TCA 72 bp | CATTTTCAGAATTGTGTTTGTAAGCTAGGCCACTGGTaGCCTTCAATGAGCACTGCAGGTTGGCTTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: HFQNCVCKLGHW*PSMSTAGWLPI Trigger: AATGGGAAGCCAACCTGCAGTGCTCATTGAAGGTCACCAGTGGCCTAGCTTACAAACACAATTCTGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | GTGACTGAGTCTCATGACAGGAGAAGAACTGACTTCTaGACCTTGACCTTCATGCATGTACACGCTCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VTESHDRRRTDF*TLTFMHVHALT Trigger: AGTTAGAGCGTGTACATGCATGAAGGTCAAGGTTCAGAAGTCAGTTCTTCTCCTGTCATGAGACTCAGTCAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR GCA 72 bp | AATCCCTTTAATAAAACATTCAGTAGAGCCTGCTTGTaGACGCGCACTAACTCCTCCCATCCCTTCTACACT | + |
|
Preference number: 3 (lower is better) Translates to: NPFNKTFSRACL*TRTNSSHPFYT Trigger: AGTGTAGAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR CCA 72 bp | GGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTaGGAAGATAGCTCAGTGTTTAAGAGCACTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GFLIQLKRWLQD*EDSSVFKSTGC Trigger: GCAGCCAGTGCTCTTAAACACTGAGCTATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCCTCCTCTGGCTTTCTaGATGACTTCCTTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LLPVRLIAFFYAQLCENPPPLAF*MTSLQM Trigger: CATTTGCAAGGAAGTCATCAAGAAAGCCAGAGGAGG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | AGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTaGGAACCCTCCTCTGGCTTTCTTGATGACTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: STSDCFLLCTVV*EPSSGFLDDFL Trigger: AAGGAAGTCATCAAGAAAGCCAGAGGAGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | CATGTAGTTACTGCCTGTTTGGTCAGAGTAAAGGACTaGAAAGTTTATCGGAAGCAAAGGGCCCAACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HVVTACLVRVKD*KVYRKQRAQLV Trigger: GACAAGTTGGGCCCTTTGCTTCCGATAAACTTTTCAGTCCTTTACTCTGACCAAACAGGCAGTAACTACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR CCA 72 bp | CGCACAAGAACATACCATCAACAGGACTTGGGAGAATaGCCAGATGTGCATGATGTGTCTGAGATAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RTRTYHQQDLGE*PDVHDVSEIIL Trigger: TAAGATTATCTCAGACACATCATGCACATCTGGCCATTCTCCCAAGTCCTGTTGATGGTATGTTCTTGTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTTCTTGATGACTTCCTaGCAAATGTCTGTCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LLPVRLIAFFYAQLCENPFLMTS*QMSVRT Trigger: TGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAGTGTAGTGAGCTGCTaGGTCCCTTTCAGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLTCISYVVIVIKEVGMCSVVSC*VPFRLF Trigger: GAAAAGCCTGAAAGGGACCAAGCAGCTCACTACACT...GCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | GAGAGCATGGACCTTTGCAAAGGAGTTTTAGGGACTTaGCCAAAAGACAATCCTCAATACTTGACAATACTC | + |
|
Preference number: 3 (lower is better) Translates to: ESMDLCKGVLGT*PKDNPQYLTIL Trigger: GAGTATTGTCAAGTATTGAGGATTGTCTTTTGGTCAAGTCCCTAAAACTCCTTTGCAAAGGTCCATGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTTCTTGATGACTTCCTaGCAAATGTCTGTCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: HLLPVRLIAFFYAQLCENFLMTS*QMSVRT Trigger: TGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTTATTGAGGGTTCAGTaGTTCTTACTTAAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPVRLIAFFYAQLCENPLLRVQ*FLLKRQ Trigger: CTGCCTCTTAAGTAAGAACAACTGAACCCTCAATAA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR CCA 72 bp | GAAGAATGCATTGGATTCCTAATCCAATTAAAAAGATaGCTGCAGGACTGGGAAGATAGCTCAGTGTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EECIGFLIQLKR*LQDWEDSSVFK Trigger: CTTAAACACTGAGCTATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| 3UTR TCA 72 bp | GATGGAAACATTATATTGACTTATCATTCAGGGGGTTaGAGTCCGAAAGCTGGAGTTACATTTGCAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: DGNIILTYHSGG*SPKAGVTFANL Trigger: TAGATTTGCAAATGTAACTCCAGCTTTCGGACTTCAACCCCCTGAATGATAAGTCAATATAATGTTTCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAGATTCAGGCTTTTCTTATaGAGGGTTCAGTTGTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LTCISYVVIVIKEVGMCRFRLFL*RVQLFL Trigger: TAAGAACAACTGAACCCTCAATAAGAAAAGCCTGAA...TCTGCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| 3UTR TCA 72 bp | GAATTATCCAAAGCAAGAAAGATAAGACCTTGTGCCTaGAGAAATCAAGTCACTGAATATCCCACCTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: ELSKARKIRPCA*RNQVTEYPTYL Trigger: TAAATAGGTGGGATATTCAGTGACTTGATTTCTTCAGGCACAAGGTCTTATCTTTCTTGCTTTGGATAATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACCTCGCACTGGGAACTaGCTCCACAATCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLPRTGN*LHNHCR Trigger: CCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCCTCGCACTGGGAACTaGCTCCACAATCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPPRTGN*LHNHCR Trigger: CCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATGGCCGAGGCTGGACTaGTGCTGGTTATTAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLWPRLD*CWLLTA Trigger: CGCCGTTAATAACCAGCACCAGTCCAGCCTCGGCCA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTGGCCGAGGCTGGACTaGTGCTGGTTATTAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPWPRLD*CWLLTA Trigger: CGCCGTTAATAACCAGCACCAGTCCAGCCTCGGCCA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| 3UTR CAA 72 bp | TCATGGGTTAGGGCTGCTCCTGCAGAGGTCTCGGGTTaGTTTGGTTCCCAGCGCCTACATGGCAGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWVRAAPAEVSG*FGSQRLHGSSK Trigger: CTTGGAGCTGCCATGTAGGCGCTGGGAACCAAACAAACCCGAGACCTCTGCAGGAGCAGCCCTAACCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTCGGACGGCAGTTGCTaGCTTCAGGAGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPSDGSC*LQETFC Trigger: GCAGAAAGTCTCCTGAAGGCAGCAACTGCCGTCCGA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATCGGACGGCAGTTGCTaGCTTCAGGAGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLSDGSC*LQETFC Trigger: GCAGAAAGTCTCCTGAAGGCAGCAACTGCCGTCCGA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCTGCTTTTTGGCTTCTaGTTTCCCCTCCGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPLLFGF*FPLRPF Trigger: AAAGGGCCGGAGGGGAAATCAGAAGCCAAAAAGCAG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAATTACTGCTGTGAACTaGTGCTTCCACGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLITAVN*CFHGPD Trigger: ATCCGGGCCGTGGAAGCATCAGTTCACAGCAGTAAT...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGTCGGACGGCAGTTGCTaGCTTCAGGAGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTDTDVSADSRATRVTQSDGSC*LQETFC Trigger: GCAGAAAGTCTCCTGAAGGCAGCAACTGCCGTCCGA...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLVSPPS*FSPPSL Trigger: TAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACAC...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAAATCTTTTGGCCCAGTaGGGTCATTACCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLNLLAQ*GHYHRD Trigger: GTCCCTGTGGTAATGACCTCACTGGGCCAAAAGATT...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATGTCTTATTGCCGTCTaGCCCCTTCTCTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLCLIAV*PLLFYQ Trigger: CTGGTAGAAGAGAAGGGGGCAGACGGCAATAAGACA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTGTCTTATTGCCGTCTaGCCCCTTCTCTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPCLIAV*PLLFYQ Trigger: CTGGTAGAAGAGAAGGGGGCAGACGGCAATAAGACA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCCTCGCACTGGGAACTaGCTCCACAATCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MSNDRRTDTDVSADSRATPRTGN*LHNHCR Trigger: CCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGG...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCGTGTTCCTGCTTTTTaGCTTCTGATTTCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPRVPAF*LLISPP Trigger: CGGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACGTGTTCCTGCTTTTTaGCTTCTGATTTCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLRVPAF*LLISPP Trigger: CGGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGTGTCTTATTGCCGTCTaGCCCCTTCTCTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRTDTDVSADSRATRVTQCLIAV*PLLFYQ Trigger: CTGGTAGAAGAGAAGGGGGCAGACGGCAATAAGACA...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGAACTGATGCTTCCACAGCATTGTCTTCCTTCTGGCTCAATCTGTCTCCCTCGCACTGGGAACTaGCTCCACAATCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CCELMLPQHCLPSGSICLPRTGN*LHNHCR Trigger: CCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGG...GAGACAGATTGAGCCAGAAGGAAGACAATGCTGTGGAAGCATCAGTTCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183338.7 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAGGCCTCATCGCAGCATaGATAAACTCAGGACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLGLIAA*INSGLL Trigger: AAGAAGTCCTGAGTTTATCCATGCTGCGATGAGGCC...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000108051.8 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATGCTTCCACTGTTTCTaGATTCTCCGTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLCFHCF*ILRLNF Trigger: GAAGTTGAGACGGAGAATTCAGAAACAGTGGAAGCA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCATAATCTTGGCAGGCTaGATGGTGATTCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPIILAG*MVILSP Trigger: TGGAGACAGAATCACCATGCAGCCTGCCAAGATTAT...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAATAATCTTGGCAGGCTaGATGGTGATTCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLIILAG*MVILSP Trigger: TGGAGACAGAATCACCATGCAGCCTGCCAAGATTAT...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGTGCTTCCACTGTTTCTaGATTCTCCGTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRTDTDVSADSRATRVTQCFHCF*ILRLNF Trigger: GAAGTTGAGACGGAGAATTCAGAAACAGTGGAAGCA...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACTTCGAGACAGCCTTTaGGTCCACAAGTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLLRDSL*VHKFEY Trigger: ATATTCAAACTTGTGGACTCAAAGGCTGTCTCGAAG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCTTCGAGACAGCCTTTaGGTCCACAAGTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPLRDSL*VHKFEY Trigger: ATATTCAAACTTGTGGACTCAAAGGCTGTCTCGAAG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGATGAGACGCTGTTTCTaGATTCTCCGTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRTDTDVSADSRATRVTQMRRCF*ILRLNF Trigger: GAAGTTGAGACGGAGAATTCAGAAACAGCGTCTCAT...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183463.8 |
||
| 3UTR CAA 72 bp | ATCCCTTCTACACTGGTAAGCCCTACAGAGAAAACCTaGGTTGGAAGTCAAGCCAGACCGGAGGAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTLVSPTEKT*VGSQARPEESH Trigger: ATGGCTCTCCTCCGGTCTGGCTTGACTTCCAACCAAGGTTTTCTCTGTAGGGCTTACCAGTGTAGAAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTTGAGTCCACAAGTTTaGATATGCCCTTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPLSPQV*ICPFLS Trigger: AGAGAGAAAAGGGCATATTCAAACTTGTGGACTCAA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATTGAGTCCACAAGTTTaGATATGCCCTTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLLSPQV*ICPFLS Trigger: AGAGAGAAAAGGGCATATTCAAACTTGTGGACTCAA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | ACGAGAGCATGCAGTGCTCTCAACCCCTCAACTATCTCTCCAACTCCCTTTAAAATTACTGCTGTGAACTaGTGCTTCCACGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRACSALNPSTISPTPFKITAVN*CFHGPD Trigger: ATCCGGGCCGTGGAAGCATCAGTTCACAGCAGTAAT...TTTAAAGGGAGTTGGAGAGATAGTTGAGGGGTTGAGAGCACTGCATGCTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAGATAAACTCTGGAGTTaGTATACAAGGAGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLDKLWS*YTRRDK Trigger: TTTGTCCCTCCTTGTATATCAACTCCAGAGTTTATC...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091144.11 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGATAAACTCTGGAGTTaGTATACAAGGAGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPDKLWS*YTRRDK Trigger: TTTGTCCCTCCTTGTATATCAACTCCAGAGTTTATC...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091144.11 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCCTTCAGTCTTCACCTGTACAGTCACCTGTACAGGCCAGGCCACAGCTTACAGTGAGCATTACTaGTGTGAACTGATGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPSVFTCTVTCTGQATAYSEHY*CELMLP Trigger: TGGAAGCATCAGTTCACAGCAGTAATGCTCACTGTA...AGCTGTGGCCTGGCCTGTACAGGTGACTGTACAGGTGAAGACTGAAGGACCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATTCACATCGTGTTCCTaGTTTTTGGCTTCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLFTSCS*FLASDF Trigger: GAAATCAGAAGCCAAAAAGCAGGAACACGATGTGAA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGTGTTCCTGCTTTTTaGCTTCTGATTTCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MSNDRRTDTDVSADSRATRVPAF*LLISPP Trigger: CGGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACG...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGAACTGATGCTTCCACAGCATTGTCTTCCTTCTGGCTCAATCTGTCTCGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CCELMLPQHCLPSGSICLVSPPS*FSPPSL Trigger: TAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACAC...GAGACAGATTGAGCCAGAAGGAAGACAATGCTGTGGAAGCATCAGTTCACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183338.7 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKGEKGNKHQALELPGKFVSPPS*FSPPSL Trigger: TAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACAC...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TCACCTGTACAGGCCAGGCCACAGCTCTCTACCCATAAAAGGTGTGACGGGAAACTTCGAGACAGCCTTTaGGTCCACAAGTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVQARPQLSTHKRCDGKLRDSL*VHKFEY Trigger: ATATTCAAACTTGTGGACTCAAAGGCTGTCTCGAAG...TTTCCCGTCACACCTTTTATGGGTAGAGAGCTGTGGCCTGGCCTGTACAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTTTTGTCATCATCAATaGCCACTATGTTTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFLANVCQDNPDSLQCPPFCHHQ*PLCFWA Trigger: TGCCCAAAAACATAGTGGTCATTGATGATGACAAAA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGGATAAACTCTGGAGTTaGTATACAAGGAGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRTDTDVSADSRATRVTQDKLWS*YTRRDK Trigger: TTTGTCCCTCCTTGTATATCAACTCCAGAGTTTATC...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCGCACTGGGAACTaGCTCCACAATCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENPRTGN*LHNHCR Trigger: CCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGG...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR CAA 72 bp | CGGAATCCCTTTAATAAAACATTCAGTAGAGCCTGCTaGTGCACGCGCACTAACTCCTCCCATCCCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RNPFNKTFSRAC*CTRTNSSHPFY Trigger: GTAGAAGGGATGGGAGGAGTTAGTGCGCGTGCACAAGCAGGCTCTACTGAATGTTTTATTAAAGGGATTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | ATGTCGAATGACAGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTTGCTTCCACTGTTTCTaGATTCTCCGTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSNDRRTDTDVSADSRATCFHCF*ILRLNF Trigger: GAAGTTGAGACGGAGAATTCAGAAACAGTGGAAGCA...AGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCTGTCATTCGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGAACTGATGCTTCCACAGCATTGTCTTCCTTCTGGCTCAATCTGTCTCCTACCTCCCTGTTTCTaGATTCTCCGTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCELMLPQHCLPSGSICLLPPCF*ILRLNF Trigger: GAAGTTGAGACGGAGAATTCAGAAACAGGGAGGTAG...GAGACAGATTGAGCCAGAAGGAAGACAATGCTGTGGAAGCATCAGTTCACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183338.7 |
||
| CDS-3UTR CCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTGGCCGAGGCTGGACTaGTGCTGGTTATTAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENWPRLD*CWLLTA Trigger: CGCCGTTAATAACCAGCACCAGTCCAGCCTCGGCCA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCTGCTTTTTGGCTTCTaGTTTCCCCTCCGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPLLFGF*FPLRPF Trigger: AAAGGGCCGGAGGGGAAATCAGAAGCCAAAAAGCAG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTCGGACGGCAGTTGCTaGCTTCAGGAGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENSDGSC*LQETFC Trigger: GCAGAAAGTCTCCTGAAGGCAGCAACTGCCGTCCGA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGGTGAGAAAGGAAACAAACACCAGGCACTGGAGCTACCTGGCAAGTTCATAATCTTGGCAGGCTaGATGGTGATTCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKGEKGNKHQALELPGKFIILAG*MVILSP Trigger: TGGAGACAGAATCACCATGCAGCCTGCCAAGATTAT...GAACTTGCCAGGTAGCTCCAGTGCCTGGTGTTTGTTTCCTTTCTCACCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATCAGCTCACAACCATCTaGAACTCCCGTCCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDQLTTI*NSRPRG Trigger: TCCTCTGGGACGGGAGTTCCAGATGGTTGTGAGCTG...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184677.7 |
||
| 3UTR CAA 72 bp | TATGCACAGTTGTGTGAGAACCCTCCTCTGGCTTTCTaGATGACTTCCTTGCAAATGTCTGTCAGGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: YAQLCENPPLAF*MTSLQMSVRTT Trigger: GGTTGTCCTGACAGACATTTGCAAGGAAGTCATCAAGAAAGCCAGAGGAGGGTTCTCACACAACTGTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPVSPPS*FSPPSL Trigger: TAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACAC...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTAATCTTTTGGCCCAGTaGGGTCATTACCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPNLLAQ*GHYHRD Trigger: GTCCCTGTGGTAATGACCTCACTGGGCCAAAAGATT...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCTGCTTTTTGGCTTCTaGTTTCCCCTCCGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENLLFGF*FPLRPF Trigger: AAAGGGCCGGAGGGGAAATCAGAAGCCAAAAAGCAG...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACATTACTGCTGTGAACTaGTGCTTCCACGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENITAVN*CFHGPD Trigger: ATCCGGGCCGTGGAAGCATCAGTTCACAGCAGTAAT...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 |
||
| CDS-3UTR TCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATATTACTGCTGTGAACTaGTGCTTCCACGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDITAVN*CFHGPD Trigger: ATCCGGGCCGTGGAAGCATCAGTTCACAGCAGTAAT...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184677.7 ENSMUST00000195432.2 |
||
| CDS-3UTR GCA 90 bp | ACACAACATCTGCAGGCACATCAAAGTAAATTAGGTGTAAAAATGTCGTGTGGATCGGACGGCAGTTGCTaGCTTCAGGAGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQHLQAHQSKLGVKMSCGSDGSC*LQETFC Trigger: GCAGAAAGTCTCCTGAAGGCAGCAACTGCCGTCCGA...TCCACACGACATTTTTACACCTAATTTACTTTGATGTGCCTGCAGATGTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTGTCTTATTGCCGTCTaGCCCCTTCTCTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPCLIAV*PLLFYQ Trigger: CTGGTAGAAGAGAAGGGGGCAGACGGCAATAAGACA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | CTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAGATGGCCGAGGCTGGACTaGTGCTGGTTATTAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTCISYVVIVIKEVGMCRWPRLD*CWLLTA Trigger: CGCCGTTAATAACCAGCACCAGTCCAGCCTCGGCCA...TCTGCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCGTGTTCCTGCTTTTTaGCTTCTGATTTCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPRVPAF*LLISPP Trigger: CGGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATTTCCCAGCATCCACATaGCAGCTCACAACCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDFPAST*QLTTIW Trigger: CCAGATGGTTGTGAGCTGCCATGTGGATGCTGGGAA...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184677.7 |
||
| CDS-3UTR CCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATCTGCCCTTCCAGGACTaGGATACAATTCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDLPFQD*DTIPSI Trigger: GATGCTGGGAATTGTATCCCAGTCCTGGAAGGGCAG...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184677.7 |
||
| 3UTR CAA 72 bp | CTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTaGTGTGAGAACCCTCCTCTGGCTTTCTTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPVRLIAFFYAQ*CENPPLAFLMT Trigger: AGTCATCAAGAAAGCCAGAGGAGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENVSPPS*FSPPSL Trigger: TAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACAC...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACAATCTTTTGGCCCAGTaGGGTCATTACCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENNLLAQ*GHYHRD Trigger: GTCCCTGTGGTAATGACCTCACTGGGCCAAAAGATT...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTCTCTACCCATAAAAGGTGTGACGGGAAACAAACTGAACGGAAGCAATTCACATCGTGTTCCTaGTTTTTGGCTTCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLSTHKRCDGKQTERKQFTSCS*FLASDF Trigger: GAAATCAGAAGCCAAAAAGCAGGAACACGATGTGAA...TTGCTTCCGTTCAGTTTGTTTCCCGTCACACCTTTTATGGGTAGAGAGCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR GCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATCATGGATATCAGGCATaGACACGGGACACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDHGYQA*TRDTDM Trigger: CATGTCTGTGTCCCGTGTGCATGCCTGATATCCATG...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184677.7 |
||
| CDS-3UTR GCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATTTTAAGAGCACTGGCTaGCCTTCCAGGACTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDFKSTG*PSRTGI Trigger: TATCCCAGTCCTGGAAGGGCAGCCAGTGCTCTTAAA...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184677.7 |
||
| CDS-3UTR CCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCGTGTTCCTGCTTTTTaGCTTCTGATTTCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENRVPAF*LLISPP Trigger: CGGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACG...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| 3UTR CAA 72 bp | AGCGCACTAGATCTTGCTCTCCTCTGTGTGAAGCTTTaGGATCCACTCAGTTCACATTCTAGATACCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SALDLALLCVKL*DPLSSHSRYLY Trigger: ATACAGGTATCTAGAATGTGAACTGAGTGGATCCAAAAGCTTCACACAGAGGAGAGCAAGATCTAGTGCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| 3UTR CAA 72 bp | CGCACTGTACTACAGGGAATGAGTTTAATGCAGCACTaGGGAAGAGGTGTGATGTGGCAATTAGATAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTVLQGMSLMQH*GRGVMWQLDKV Trigger: CACTTTATCTAATTGCCACATCACACCTCTTCCCAAGTGCTGCATTAAACTCATTCCCTGTAGTACAGTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
||
| CDS-3UTR CCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACGGCCTCATCGCAGCATaGATAAACTCAGGACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENGLIAA*INSGLL Trigger: AAGAAGTCCTGAGTTTATCCATGCTGCGATGAGGCC...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000108051.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAATCTTTTGGCCCAGTaGGGTCATTACCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLTCISYVVIVIKEVGMCNLLAQ*GHYHRD Trigger: GTCCCTGTGGTAATGACCTCACTGGGCCAAAAGATT...GCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS-3UTR GCA 90 bp | CTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAGATGTCTTATTGCCGTCTaGCCCCTTCTCTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCISYVVIVIKEVGMCRCLIAV*PLLFYQ Trigger: CTGGTAGAAGAGAAGGGGGCAGACGGCAATAAGACA...TCTGCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCTTCGAGACAGCCTTTaGGTCCACAAGTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENLRDSL*VHKFEY Trigger: ATATTCAAACTTGTGGACTCAAAGGCTGTCTCGAAG...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR GCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTACAGTGAGCATTACTaGTGTGAACTGATGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENYSEHY*CELMLP Trigger: TGGAAGCATCAGTTCACAGCAGTAATGCTCACTGTA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR GCA 90 bp | GAATGCATTGGATTCCTAATCCAATTAAAAAGATGGCTGCAGGACTGGGAAGATTACAGTGAGCATTACTaGTGTGAACTGATGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECIGFLIQLKRWLQDWEDYSEHY*CELMLP Trigger: TGGAAGCATCAGTTCACAGCAGTAATGCTCACTGTA...ATCTTCCCAGTCCTGCAGCCATCTTTTTAATTGGATTAGGAATCCAATGCATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184677.7 ENSMUST00000195432.2 |
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| CDS-3UTR GCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTTCACATCGTGTTCCTaGTTTTTGGCTTCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPFTSCS*FLASDF Trigger: GAAATCAGAAGCCAAAAAGCAGGAACACGATGTGAA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTTGAGTCCACAAGTTTaGATATGCCCTTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENLSPQV*ICPFLS Trigger: AGAGAGAAAAGGGCATATTCAAACTTGTGGACTCAA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTTTTTGTCATCATCAATaGCCACTATGTTTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLIAFFYAQLCENPFCHHQ*PLCFWA Trigger: TGCCCAAAAACATAGTGGTCATTGATGATGACAAAA...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACGATAAACTCTGGAGTTaGTATACAAGGAGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENDKLWS*YTRRDK Trigger: TTTGTCCCTCCTTGTATATCAACTCCAGAGTTTATC...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091144.11 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR TCA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTTTTGTCATCATCAATaGCCACTATGTTTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVRLIAFFYAQLCENFCHHQ*PLCFWA Trigger: TGCCCAAAAACATAGTGGTCATTGATGATGACAAAA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR TCA 90 bp | TTCCTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCTTGAGTCCACAAGTTTaGATATGCCCTTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTCISYVVIVIKEVGMCLSPQV*ICPFLS Trigger: AGAGAGAAAAGGGCATATTCAAACTTGTGGACTCAA...GCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR CAA 72 bp | TATAATACACGAGTAAATGACATTAGGACAGCCATGTaGACAGCCAACCTCCTTTTCATACTTTTAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YNTRVNDIRTAM*TANLLFILLGT Trigger: AGTACCTAAAAGTATGAAAAGGAGGTTGGCTGTCAACATGGCTGTCCTAATGTCATTTACTCGTGTATTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195432.2 |
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| 3UTR CAA 72 bp | AGATGGAAACATTATATTGACTTATCATTCAGGGGGTaGAAGTCCGAAAGCTGGAGTTACATTTGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RWKHYIDLSFRG*KSESWSYICKS Trigger: AGATTTGCAAATGTAACTCCAGCTTTCGGACTTCAACCCCCTGAATGATAAGTCAATATAATGTTTCCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS-3UTR TCA 90 bp | CTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCAGATTTTGTCATCATCAATaGCCACTATGTTTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCISYVVIVIKEVGMCRFCHHQ*PLCFWA Trigger: TGCCCAAAAACATAGTGGTCATTGATGATGACAAAA...TCTGCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| 3UTR CAA 72 bp | GTTATAGTTATAAAGGAAGTGGGAATGTGCAGAGAGTaGTCAAATATTTCTATAATGGGACAAAGACGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIVIKEVGMCRE*SNISIMGQRRN Trigger: GTTTCGTCTTTGTCCCATTATAGAAATATTTGACAACTCTCTGCACATTCCCACTTCCTTTATAACTATAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS CCA 90 bp | CATAGACCAGCACCTGGGCAGCATAGCCCTGCTCTAACCTCGCACTaGGAACTGGCTCCACAATCACTGCCGGGCAGTCAGGGCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRPAPGQHSPALTSH*ELAPQSLPGSQGPC Trigger: ACACGGGCCCTGACTGCCCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGGTTAGAGCAGGGCTATGCTGCCCAGGTGCTGGTCTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183338.7 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS TCA 90 bp | TCCACAATCACTGCCGGGCAGTCAGGGCCCGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTAGGAAGCTCCAGAGCAGAGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: STITAGQSGPVSPPS*FSPPSLGSSRAEPP Trigger: CGGAGGCTCTGCTCTGGAGCTTCCTAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACGGGCCCTGACTGCCCGGCAGTGATTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183338.7 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCTGACCCCGTCAGGTTaGACTTTGCCTGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DFLANVCQDNPDSLQCPPLTPSG*TLPGVD Trigger: GTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACTGACCCCGTCAGGTTaGACTTTGCCTGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLLTPSG*TLPGVD Trigger: GTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLRVTSL*IFSSIA Trigger: AGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DFLANVCQDNPDSLQCPPRVTSL*IFSSIA Trigger: AGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCCCGTCAGGTTTGACTTaGCCTGGAGTTGACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DFLANVCQDNPDSLQCPPPSGLT*PGVDTV Trigger: CACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGG...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTACCGTCAGGTTTGACTTaGCCTGGAGTTGACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLPSGLT*PGVDTV Trigger: CACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGG...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGCGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRTDTDVSADSRATRVTQRVTSL*IFSSIA Trigger: AGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACG...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062009.14 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTAACTCGTTCTAAAGACTaGTCATCAGCAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLTRSKD*SSAAAA Trigger: GGCAGCAGCTGCTGATGACAAGTCTTTAGAACGAGT...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCACTCGTTCTAAAGACTaGTCATCAGCAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DFLANVCQDNPDSLQCPPTRSKD*SSAAAA Trigger: GGCAGCAGCTGCTGATGACAAGTCTTTAGAACGAGT...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGCCGTCAGGTTTGACTTaGCCTGGAGTTGACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRTDTDVSADSRATRVTQPSGLT*PGVDTV Trigger: CACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGG...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | GACTTCCTTGCAAATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCTCGTGTTCCTGCTTTTaGGCTTCTGATTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFLANVCQDNPDSLQCPPSCSCF*ASDFPS Trigger: GGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACGA...GGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATTTGCAAGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AATGTCTGTCAGGACAACCCTGACAGTCTGCAGTGCCCGCCCGGAACGTGCTTATCGTGTTCCTGCTTTTaGGCTTCTGATTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVCQDNPDSLQCPPGTCLSCSCF*ASDFPS Trigger: GGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACGA...TAAGCACGTTCCGGGCGGGCACTGCAGACTGTCAGGGTTGTCCTGACAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTTCAGTCTTCACCTGTACAGTCACCTGTACAGGCCAGGCCACAGCTACTCGTTCTAAAGACTaGTCATCAGCAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPSVFTCTVTCTGQATATRSKD*SSAAAA Trigger: GGCAGCAGCTGCTGATGACAAGTCTTTAGAACGAGT...AGCTGTGGCCTGGCCTGTACAGGTGACTGTACAGGTGAAGACTGAAGGACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | AGAAGAACTGATACCGATGTGTCTGCAGACAGCAGGGCGACTCGAGTGACGCAGTCGTGTTCCTGCTTTTaGGCTTCTGATTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRTDTDVSADSRATRVTQSCSCF*ASDFPS Trigger: GGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACGA...CTGCGTCACTCGAGTCGCCCTGCTGTCTGCAGACACATCGGTATCAGTTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062009.14 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | CCACAGCTCTCTACCCATAAAAGGTGTGACGGGAAACAAACTGAACGGAAGCAACTGACCCCGTCAGGTTaGACTTTGCCTGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PQLSTHKRCDGKQTERKQLTPSG*TLPGVD Trigger: GTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAG...TTGCTTCCGTTCAGTTTGTTTCCCGTCACACCTTTTATGGGTAGAGAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | TGCTGTGAACTGATGCTTCCACAGCATTGTCTTCCTTCTGGCTCAATCTGTCTCCGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCELMLPQHCLPSGSICLRVTSL*IFSSIA Trigger: AGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACG...GAGACAGATTGAGCCAGAAGGAAGACAATGCTGTGGAAGCATCAGTTCACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183338.7 |
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| CDS-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCTGACCCCGTCAGGTTaGACTTTGCCTGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPVRLIAFFYAQLCENPLTPSG*TLPGVD Trigger: GTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPVRLIAFFYAQLCENPRVTSL*IFSSIA Trigger: AGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183463.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CAA 90 bp | TTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCCTCCGTCAGGTTTGACTTaGCCTGGAGTTGACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPVRLIAFFYAQLCENPPSGLT*PGVDTV Trigger: CACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGG...AGGGTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CAA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACCTGACCCCGTCAGGTTaGACTTTGCCTGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPVRLIAFFYAQLCENLTPSG*TLPGVD Trigger: GTCAACTCCAGGCAAAGTCAAACCTGACGGGGTCAG...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACACTCGTTCTAAAGACTaGTCATCAGCAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPVRLIAFFYAQLCENTRSKD*SSAAAA Trigger: GGCAGCAGCTGCTGATGACAAGTCTTTAGAACGAGT...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
||
| CDS-3UTR CAA 90 bp | CATTTACTTCCAGTACGTCTGATTGCTTTCTTCTATGCACAGTTGTGTGAGAACTCGTGTTCCTGCTTTTaGGCTTCTGATTTCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: HLLPVRLIAFFYAQLCENSCSCF*ASDFPS Trigger: GGAGGGGAAATCAGAAGCCAAAAAGCAGGAACACGA...GTTCTCACACAACTGTGCATAGAAGAAAGCAATCAGACGTACTGGAAGTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062009.14 ENSMUST00000091144.11 ENSMUST00000108051.8 ENSMUST00000108053.9 ENSMUST00000163748.8 ENSMUST00000194641.6 |
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| CDS-3UTR CAA 90 bp | TTCCTGACCTGTATTTCTTATGTGGTTATAGTTATAAAGGAAGTGGGAATGTGCCCGTCAGGTTTGACTTaGCCTGGAGTTGACACTGTG | + |
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Preference number: 5 (lower is better) Translates to: FLTCISYVVIVIKEVGMCPSGLT*PGVDTV Trigger: CACAGTGTCAACTCCAGGCAAAGTCAAACCTGACGG...GCACATTCCCACTTCCTTTATAACTATAACCACATAAGAAATACAGGTCAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194641.6 |
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| CDS CCA 72 bp | GCACCTGGGCAGCATAGCCCTGCTCTAACCTCGCACTaGGAACTGGCTCCACAATCACTGCCGGGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: APGQHSPALTSH*ELAPQSLPGSQ Trigger: CTGACTGCCCGGCAGTGATTGTGGAGCCAGTTCCCAGTGCGAGGTTAGAGCAGGGCTATGCTGCCCAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183338.7 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS CAA 72 bp | CACTGCCGGGCAGTCAGGGCCCGTGTCACCTCCCTCTaGATTTTCTCCTCCATCGCTAGGAAGCTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: HCRAVRARVTSL*IFSSIARKLQS Trigger: GCTCTGGAGCTTCCTAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACGGGCCCTGACTGCCCGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183338.7 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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| CDS TCA 72 bp | ACTGCCGGGCAGTCAGGGCCCGTGTCACCTCCCTCTTaGTTTTCTCCTCCATCGCTAGGAAGCTCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: TAGQSGPVSPPS*FSPPSLGSSRA Trigger: TGCTCTGGAGCTTCCTAGCGATGGAGGAGAAAATCAAGAGGGAGGTGACACGGGCCCTGACTGCCCGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062009.14 ENSMUST00000163748.8 ENSMUST00000183338.7 ENSMUST00000183463.8 ENSMUST00000194641.6 |
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