Pregenerated sensors for ELF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036461

Ensembl transcript IDs: ENSMUST00000040131.13, ENSMUST00000110835.3, ENSMUST00000227192.2

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	AGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTaGGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTC	+
Preference number: 1 (lower is better) Translates to: SQEFLHRLNLLLLHN*VLRHSEETHTWVRL Trigger: GAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCTGGCCTTGAACTCCTaGTTGCCCTTTGTCCTCCTC	+
Preference number: 2 (lower is better) Translates to: IAVSHLALSLLLSHSFSNLALNS*LPFVLL Trigger: GAGGAGGACAAAGGGCAATCAGGAGTTCAAGGCCAG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTTCACAACTGAGTTCTaGGACATTCAGAGGAGACAC	+
Preference number: 2 (lower is better) Translates to: IAVSHLALSLLLSHSFSNFTTEF*DIQRRH Trigger: GTGTCTCCTCTGAATGTCTCAGAACTCAGTTGTGAA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTCCTCCTCCCAGTGCTaGAATTACACATATATGCCA	+
Preference number: 2 (lower is better) Translates to: IAVSHLALSLLLSHSFSNSSSQC*NYTYMP Trigger: TGGCATATATGTGTAATTCCAGCACTGGGAGGAGGA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR GCA 72 bp	ATAAGTGACACAGCTATACTAGCTCAGGACTCCCATTaGTTCTTTGGCCCTCAGAGCCCTGATGCTCTTAGA	+
Preference number: 3 (lower is better) Translates to: ISDTAILAQDSH*FFGPQSPDALR Trigger: TCTAAGAGCATCAGGGCTCTGAGGGCCAAAGAAGCAATGGGAGTCCTGAGCTAGTATAGCTGTGTCACTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACTCCTGATTGCCCTTaGTCCTCCTCCCAGTGCTGG	+
Preference number: 3 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTPDCP*SSSQCW Trigger: CCAGCACTGGGAGGAGGACAAAGGGCAATCAGGAGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR TCA 72 bp	TTTCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTaGGTTCTGAGACATTCAGAGGAGACACACACTTGG	+
Preference number: 3 (lower is better) Translates to: FLHRLNLLLLHN*VLRHSEETHTW Trigger: CCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATCTCTTGCGCTGCTCTaGGGAGGAGGCTCCTGGGGA	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLASLALL*GGGSWG Trigger: TCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAACAGGTGTCGTCGCGCTaGACGATGGTGCGGATGCCA	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKQVSSR*TMVRMP Trigger: TGGCATCCGCACCATCGTTCAGCGCGACGACACCTG...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAGTGCGGATGCCACACTaGCCGCTCCATTGCAAATGG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAVRMPH*PLHCKW Trigger: CCATTTGCAATGGAGCGGGCAGTGTGGCATCCGCAC...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAGAACGATGGTGCGGATaGCACACTGCCCGCTCCATT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAERWCG*HTARSI Trigger: AATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTC...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATCTCTTGCGCTGCTCTaGGGAGGAGGCTCCTGGGGA	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKSLALL*GGGSWG Trigger: TCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAGTACTTGGGTGGGGCTaGGGACAATTGAAGGAGAGC	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAVLGWG*GQLKES Trigger: GCTCTCCTTCAATTGTCCTCAGCCCCACCCAAGTAC...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACAGGTAGCTTTGTCCTaGAGCAGGGCCAGCAAAAAC	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAQVALS*SRASKN Trigger: GTTTTTGCTGGCCCTGCTTCAGGACAAAGCTACCTG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAAGGATAGGGAGCCTGTaGGGGTTGCACTGTCCTCAG	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKRIGSL*GLHCPQ Trigger: CTGAGGACAGTGCAACCCTCACAGGCTCCCTATCCT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCAGGTGTCGTCGCGCTaGACGATGGTGCGGATGCCA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNQVSSR*TMVRMP Trigger: TGGCATCCGCACCATCGTTCAGCGCGACGACACCTG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCAGGTGTCGTCGCGCTaGACGATGGTGCGGATGCCA	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHQVSSR*TMVRMP Trigger: TGGCATCCGCACCATCGTTCAGCGCGACGACACCTG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAGGCTCCTGGGGAGTCTaGATTTGTCTCTTGCACTTG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAGSWGV*ICLLHL Trigger: CAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCC...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGTGCGGATGCCACACTaGCCGCTCCATTGCAAATGG	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKVRMPH*PLHCKW Trigger: CCATTTGCAATGGAGCGGGCAGTGTGGCATCCGCAC...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGAACGATGGTGCGGATaGCACACTGCCCGCTCCATT	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKERWCG*HTARSI Trigger: AATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTC...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTCTCTTGCGCTGCTCTaGGGAGGAGGCTCCTGGGGA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNSLALL*GGGSWG Trigger: TCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATTCTTTCTCTTGCGCTaGTCTGGGGAGGAGGCTCCT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRFFLLR*SGEEAP Trigger: AGGAGCCTCCTCCCCAGAGCAGCGCAAGAGAAAGAA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACGGATCTTTGGGGTTTaGAGCTTTAGAATTCCCGGG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLARIFGV*SFRIPG Trigger: CCCGGGAATTCTAAAGCTGCAAACCCCAAAGATCCG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATTTGCTGCTTCCTCCTaGATGGTGCTGGCTATGGTT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAFAASS*MVLAMV Trigger: AACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACACTGCCCGCTCCATTaGAAATGGACTGAACATTGC	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAHCPLH*KWTEHC Trigger: GCAATGTTCAGTCCATTTGCAATGGAGCGGGCAGTG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAATGTGACGGACACATaGGTGATTGGGGCAACGATG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLANVTDT*VIGATM Trigger: CATCGTTGCCCCAATCACCCATGTGTCCGTCACATT...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAGTCGTCGGGGAATCTaGCCGTGGTGGTTTTGTTTT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLASRRGI*PWWFCF Trigger: AAAACAAAACCACCACGGCCAGATTCCCCGACGACT...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATATGGTTGCTTCCTCTaGGACAGCTTGTACTGGCTG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAYGCFL*DSLYWL Trigger: CAGCCAGTACAAGCTGTCCCAGAGGAAGCAACCATA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGCATGGTGCTGGCTATaGTTGCTTCCTCTGGGACAG	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRAWCWL*LLPLGQ Trigger: CTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATGTCCTCAGAACTTCTaGAGGTTGTCCAACTTCCAC	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLACPQNF*RLSNFH Trigger: GTGGAAGTTGGACAACCTTCAGAAGTTCTGAGGACA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACAGGATAGGGAGCCTGTaGGGGTTGCACTGTCCTCAG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHRIGSL*GLHCPQ Trigger: CTGAGGACAGTGCAACCCTCACAGGCTCCCTATCCT...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACCATTGCAAATGGACTaGACATTGCTTGTGAGGACC	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAPLQMD*TLLVRT Trigger: GGTCCTCACAAGCAATGTTCAGTCCATTTGCAATGG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAATCTATATTGAGGAGTaGCTCGGCAGCCTCAATGGT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAIYIEE*LGSLNG Trigger: ACCATTGAGGCTGCCGAGGCACTCCTCAATATAGAT...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR GCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGGCTCCTGGGGAGTCTaGATTTGTCTCTTGCACTTG	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRGSWGV*ICLLHL Trigger: CAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTGGGGAGGAGGCTCCTaGGGAGTCTGCATTTGTCTC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHWGGGS*GVCICL Trigger: GAGACAAATGCAGACTCCCCAGGAGCCTCCTCCCCA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAAGGACCTGCTGTACTTaGGTGGGGCTGAGGACAATT	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKRTCCT*VGLRTI Trigger: AATTGTCCTCAGCCCCACCCAAGTACAGCAGGTCCT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAAGGACCTGCTGTACTTaGGTGGGGCTGAGGACAATT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRRTCCT*VGLRTI Trigger: AATTGTCCTCAGCCCCACCCAAGTACAGCAGGTCCT...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAACTGGCTGTACTACATaGACAGTTCGGAAGAGCTGG	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKTGCTT*TVRKSW Trigger: CCAGCTCTTCCGAACTGTTCATGTAGTACAGCCAGT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATACTGGAACCTGGGTTaGAGCCTGTATAGTCCTAAT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAYWNLG*SLYSPN Trigger: ATTAGGACTATACAGGCTTCAACCCAGGTTCCAGTA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGTACTTGGGTGGGGCTaGGGACAATTGAAGGAGAGC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHVLGWG*GQLKES Trigger: GCTCTCCTTCAATTGTCCTCAGCCCCACCCAAGTAC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAACTGAACATTGCTTGTaGGGACCTGCTGTACTTGGG	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKTEHCL*GPAVLG Trigger: CCCAAGTACAGCAGGTCCTCACAAGCAATGTTCAGT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAGATCCGAAGACTCTATaGTGGAACTTGGATCCTCAT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLADPKTL*WNLDPH Trigger: ATGAGGATCCAAGTTCCAGCATAGAGTCTTCGGATC...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATTTGCTGCTTCCTCCTaGATGGTGCTGGCTATGGTT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRFAASS*MVLAMV Trigger: AACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGGACACATGGGTGATTaGGGCAACGATGTCATCTTC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRGHMGD*GNDVIF Trigger: GAAGATGACATCGTTGCCCCAATCACCCATGTGTCC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAAATGTGACGGACACATaGGTGATTGGGGCAACGATG	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKNVTDT*VIGATM Trigger: CATCGTTGCCCCAATCACCCATGTGTCCGTCACATT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAAGTCGTCGGGGAATCTaGCCGTGGTGGTTTTGTTTT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRSRRGI*PWWFCF Trigger: AAAACAAAACCACCACGGCCAGATTCCCCGACGACT...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATATGGTTGCTTCCTCTaGGACAGCTTGTACTGGCTG	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRYGCFL*DSLYWL Trigger: CAGCCAGTACAAGCTGTCCCAGAGGAAGCAACCATA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGCATGGTGCTGGCTATaGTTGCTTCCTCTGGGACAG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHAWCWL*LLPLGQ Trigger: CTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGCATGGTGCTGGCTATaGTTGCTTCCTCTGGGACAG	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNAWCWL*LLPLGQ Trigger: CTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGTCTCTTGCACTTGCTaGGTTTCCATCACTTCAGGA	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRVSCTC*VSITSG Trigger: TCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGAC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCAGGTAGCTTTGTCCTaGAGCAGGGCCAGCAAAAAC	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNQVALS*SRASKN Trigger: GTTTTTGCTGGCCCTGCTTCAGGACAAAGCTACCTG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATTTGGTAATAGTACCTaGGTGCTCTCCCCATGGTCT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRFGNST*VLSPWS Trigger: AGACCATGGGGAGAGCACTCAGGTACTATTACCAAA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATTTGGTAATAGTACCTaGGTGCTCTCCCCATGGTCT	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKFGNST*VLSPWS Trigger: AGACCATGGGGAGAGCACTCAGGTACTATTACCAAA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATGTCCTCAGAACTTCTaGAGGTTGTCCAACTTCCAC	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKCPQNF*RLSNFH Trigger: GTGGAAGTTGGACAACCTTCAGAAGTTCTGAGGACA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAACCATTGCAAATGGACTaGACATTGCTTGTGAGGACC	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKPLQMD*TLLVRT Trigger: GGTCCTCACAAGCAATGTTCAGTCCATTTGCAATGG...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACCATTGCAAATGGACTaGACATTGCTTGTGAGGACC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRPLQMD*TLLVRT Trigger: GGTCCTCACAAGCAATGTTCAGTCCATTTGCAATGG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAACCACTACTGGAACCTaGGTTGAAGCCTGTATAGTC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRTTTGT*VEACIV Trigger: GACTATACAGGCTTCAACCCAGGTTCCAGTAGTGGT...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACTTTCAGTACTGTCATaGGCTGTGACGATGGAATGG	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRLSVLS*AVTMEW Trigger: CCATTCCATCGTCACAGCCCATGACAGTACTGAAAG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACAGGACCTGCTGTACTTaGGTGGGGCTGAGGACAATT	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNRTCCT*VGLRTI Trigger: AATTGTCCTCAGCCCCACCCAAGTACAGCAGGTCCT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACATCGTCATCGTCTATaGTTTCTTCTTCAGCAACAT	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLAHRHRL*FLLQQH Trigger: ATGTTGCTGAAGAAGAAATCATAGACGATGACGATG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATACTGGAACCTGGGTTaGAGCCTGTATAGTCCTAAT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRYWNLG*SLYSPN Trigger: ATTAGGACTATACAGGCTTCAACCCAGGTTCCAGTA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATCTGTGACTGTAGCATaGCATTTTCTTTCAGTACTG	+
Preference number: 4 (lower is better) Translates to: SSETFRGDTHLGSPPYLASVTVA*HFLSVL Trigger: CAGTACTGAAAGAAAATGTCATGCTACAGTCACAGA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACTGAACATTGCTTGTaGGGACCTGCTGTACTTGGG	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTEHCL*GPAVLG Trigger: CCCAAGTACAGCAGGTCCTCACAAGCAATGTTCAGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGATCCGAAGACTCTATaGTGGAACTTGGATCCTCAT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRDPKTL*WNLDPH Trigger: ATGAGGATCCAAGTTCCAGCATAGAGTCTTCGGATC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCGGATCTTTGGGGTTTaGAGCTTTAGAATTCCCGGG	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNRIFGV*SFRIPG Trigger: CCCGGGAATTCTAAAGCTGCAAACCCCAAAGATCCG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCGGATCTTTGGGGTTTaGAGCTTTAGAATTCCCGGG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHRIFGV*SFRIPG Trigger: CCCGGGAATTCTAAAGCTGCAAACCCCAAAGATCCG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTTTGCTGCTTCCTCCTaGATGGTGCTGGCTATGGTT	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNFAASS*MVLAMV Trigger: AACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCACTGCCCGCTCCATTaGAAATGGACTGAACATTGC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHHCPLH*KWTEHC Trigger: GCAATGTTCAGTCCATTTGCAATGGAGCGGGCAGTG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGGACACATGGGTGATTaGGGCAACGATGTCATCTTC	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNGHMGD*GNDVIF Trigger: GAAGATGACATCGTTGCCCCAATCACCCATGTGTCC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACAGTCGTCGGGGAATCTaGCCGTGGTGGTTTTGTTTT	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHSRRGI*PWWFCF Trigger: AAAACAAAACCACCACGGCCAGATTCCCCGACGACT...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAACCGAAGACTCTATGCTaGAACTTGGATCCTCATCAT	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKPKTLC*NLDPHH Trigger: ATGATGAGGATCCAAGTTCCAGCATAGAGTCTTCGG...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACCGAAGACTCTATGCTaGAACTTGGATCCTCATCAT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRPKTLC*NLDPHH Trigger: ATGATGAGGATCCAAGTTCCAGCATAGAGTCTTCGG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATGGGACAGCTTGTACTaGCTGTACTACATGAACAGT	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKWDSLY*LYYMNS Trigger: ACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATGGGACAGCTTGTACTaGCTGTACTACATGAACAGT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRWDSLY*LYYMNS Trigger: ACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
3UTR CAA 72 bp	CAACTGAGTTCTGAGACATTCAGAGGAGACACACACTaGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGTA	+
Preference number: 4 (lower is better) Translates to: QLSSETFRGDTH*GSPPYLAKSKV Trigger: TACTTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACTCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGACCAGCATAACTATTaGGAATATCAGCACCAGGAA	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKDQHNY*EYQHQE Trigger: TTCCTGGTGCTGATATTCTCAATAGTTATGCTGGTC...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGTCTCTTGCACTTGCTaGGTTTCCATCACTTCAGGA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNVSCTC*VSITSG Trigger: TCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGAC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGTCTCTTGCACTTGCTaGGTTTCCATCACTTCAGGA	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHVSCTC*VSITSG Trigger: TCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGAC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTGTCCTCAGAACTTCTaGAGGTTGTCCAACTTCCAC	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNCPQNF*RLSNFH Trigger: GTGGAAGTTGGACAACCTTCAGAAGTTCTGAGGACA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGCAGTTCATTCTGTTTaGCGGCTACCTGAGAGGAAA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNAVHSV*RLPERK Trigger: TTTCCTCTCAGGTAGCCGTCAAACAGAATGAACTGC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACATCTATATTGAGGAGTaGCTCGGCAGCCTCAATGGT	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNIYIEE*LGSLNG Trigger: ACCATTGAGGCTGCCGAGGCACTCCTCAATATAGAT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR GCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATCAGGTTTGTTTTTGTaGTTCCCCCACAATCTAGAC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRSGLFL*FPHNLD Trigger: GTCTAGATTGTGGGGGAAGCACAAAAACAAACCTGA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGTAATAGTACCTGAGTaGTCTCCCCATGGTCTCGTA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNVIVPE*SPHGLV Trigger: TACGAGACCATGGGGAGAGCACTCAGGTACTATTAC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGTAATAGTACCTGAGTaGTCTCCCCATGGTCTCGTA	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHVIVPE*SPHGLV Trigger: TACGAGACCATGGGGAGAGCACTCAGGTACTATTAC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATTTCACAGAGATATTTaGTGTAGTCGTCGGGGAATC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRFHRDI*CSRRGI Trigger: GATTCCCCGACGACTACACCAAATATCTCTGTGAAA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATTTCACAGAGATATTTaGTGTAGTCGTCGGGGAATC	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKFHRDI*CSRRGI Trigger: GATTCCCCGACGACTACACCAAATATCTCTGTGAAA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACCACTACTGGAACCTaGGTTGAAGCCTGTATAGTC	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTTTGT*VEACIV Trigger: GACTATACAGGCTTCAACCCAGGTTCCAGTAGTGGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACACCACTACTGGAACCTaGGTTGAAGCCTGTATAGTC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHTTTGT*VEACIV Trigger: GACTATACAGGCTTCAACCCAGGTTCCAGTAGTGGT...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCTTTCAGTACTGTCATaGGCTGTGACGATGGAATGG	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNLSVLS*AVTMEW Trigger: CCATTCCATCGTCACAGCCCATGACAGTACTGAAAG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCTTTCAGTACTGTCATaGGCTGTGACGATGGAATGG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHLSVLS*AVTMEW Trigger: CCATTCCATCGTCACAGCCCATGACAGTACTGAAAG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACATCGTCATCGTCTATaGTTTCTTCTTCAGCAACAT	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRHRHRL*FLLQQH Trigger: ATGTTGCTGAAGAAGAAATCATAGACGATGACGATG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGTTTCATCTCCATTATaGCAAGAAGCCTCAACTGTA	+
Preference number: 4 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKVSSPL*QEASTV Trigger: TACAGTTGAGGCTTCTTGTCATAATGGAGATGAAAC...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTACTGGAACCTGGGTTaGAGCCTGTATAGTCCTAAT	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHYWNLG*SLYSPN Trigger: ATTAGGACTATACAGGCTTCAACCCAGGTTCCAGTA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGAATGGTTTGTAAAATaGATTTCTGAGACCCAGCAC	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFREWFVK*ISETQH Trigger: GTGCTGGGTCTCAGAAATTCATTTTACAAACCATTC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTATGTAACTGTTGGTTaGCAGGAGACACCACTACTG	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNYVTVG*QETPLL Trigger: CAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTATGTAACTGTTGGTTaGCAGGAGACACCACTACTG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHYVTVG*QETPLL Trigger: CAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACTCTATGCTGGAACTTaGATCCTCATCATCTATGTA	+
Preference number: 4 (lower is better) Translates to: SSSSKPPAPSQLSSETFRLYAGT*ILIIYV Trigger: TACATAGATGATGAGGATCCAAGTTCCAGCATAGAG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCCGAAGACTCTATGCTaGAACTTGGATCCTCATCAT	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNPKTLC*NLDPHH Trigger: ATGATGAGGATCCAAGTTCCAGCATAGAGTCTTCGG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTGGGACAGCTTGTACTaGCTGTACTACATGAACAGT	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHWDSLY*LYYMNS Trigger: ACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGACCAGCATAACTATTaGGAATATCAGCACCAGGAA	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHDQHNY*EYQHQE Trigger: TTCCTGGTGCTGATATTCTCAATAGTTATGCTGGTC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGACCAGCATAACTATTaGGAATATCAGCACCAGGAA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNDQHNY*EYQHQE Trigger: TTCCTGGTGCTGATATTCTCAATAGTTATGCTGGTC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR GCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTCAGGTTTGTTTTTGTaGTTCCCCCACAATCTAGAC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHSGLFL*FPHNLD Trigger: GTCTAGATTGTGGGGGAAGCACAAAAACAAACCTGA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTTTCACAGAGATATTTaGTGTAGTCGTCGGGGAATC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHFHRDI*CSRRGI Trigger: GATTCCCCGACGACTACACCAAATATCTCTGTGAAA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGTTTCATCTCCATTATaGCAAGAAGCCTCAACTGTA	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHVSSPL*QEASTV Trigger: TACAGTTGAGGCTTCTTGTCATAATGGAGATGAAAC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGAATGGTTTGTAAAATaGATTTCTGAGACCCAGCAC	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHEWFVK*ISETQH Trigger: GTGCTGGGTCTCAGAAATTCATTTTACAAACCATTC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGAATGGTTTGTAAAATaGATTTCTGAGACCCAGCAC	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNEWFVK*ISETQH Trigger: GTGCTGGGTCTCAGAAATTCATTTTACAAACCATTC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR TCA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTCTGTGACTGTAGCATaGCATTTTCTTTCAGTACTG	+
Preference number: 4 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHSVTVA*HFLSVL Trigger: CAGTACTGAAAGAAAATGTCATGCTACAGTCACAGA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CCA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACCTCTATGCTGGAACTTaGATCCTCATCATCTATGTA	+
Preference number: 4 (lower is better) Translates to: IAVSHLALSLLLSHSFSNLYAGT*ILIIYV Trigger: TACATAGATGATGAGGATCCAAGTTCCAGCATAGAG...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 90 bp	CCAGCTGTGAACTCCGAGAGAAAGTCACCACAGGTGTCGTCGCGCTaGACGATGGTGCGGATGCCACACTGCCCGCTCCATTGCAAATGG	+
Preference number: 5 (lower is better) Translates to: PAVNSERKSPQVSSR*TMVRMPHCPLHCKW Trigger: CCATTTGCAATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTCAGCGCGACGACACCTGTGGTGACTTTCTCTCGGAGTTCACAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 90 bp	GATAACAGAAGTGATCACAGTGCCCGGTGGGTGTGCGACCAGCTGTaGACTCCGAGAGAAAGTCACCACAGGTGTCGTCGCGCTGAACGA	+
Preference number: 5 (lower is better) Translates to: DNRSDHSARWVCDQL*TPRESHHRCRRAER Trigger: TCGTTCAGCGCGACGACACCTGTGGTGACTTTCTCTCGGAGTTCACAGCTGGTCGCACACCCACCGGGCACTGTGATCACTTCTGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS GCA 90 bp	ACTCCGAGAGAAAGTCACCACAGGTGTCGTCGCGCTGAACGATGGTaGGGATGCCACACTGCCCGCTCCATTGCAAATGGACTGAACATT	+
Preference number: 5 (lower is better) Translates to: TPRESHHRCRRAERW*GCHTARSIANGLNI Trigger: AATGTTCAGTCCATTTGCAATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTCAGCGCGACGACACCTGTGGTGACTTTCTCTCGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 90 bp	GGGGAGGAGGCTCCTGGGGAGTCTGCATTTGTCTCTTGCACTTGCTaGGTTTCCATCACTTCAGGAATCCCATCTAATGTGACGGACACA	+
Preference number: 5 (lower is better) Translates to: GEEAPGESAFVSCTC*VSITSGIPSNVTDT Trigger: TGTGTCCGTCACATTAGATGGGATTCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCCTCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS GCA 90 bp	TTTCTTTCTCTTGCGCTGCTCTGGGGAGGAGGCTCCTGGGGAGTCTaGATTTGTCTCTTGCACTTGCTGAGTTTCCATCACTTCAGGAAT	+
Preference number: 5 (lower is better) Translates to: FLSLALLWGGGSWGV*ICLLHLLSFHHFRN Trigger: ATTCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 90 bp	ATTTGCTGCTTCCTCCTGCATGGTGCTGGCTATGGTTGCTTCCTCTaGGACAGCTTGTACTGGCTGTACTACATGAACAGTTCGGAAGAG	+
Preference number: 5 (lower is better) Translates to: ICCFLLHGAGYGCFL*DSLYWLYYMNSSEE Trigger: CTCTTCCGAACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATGGTGCTGGCTATGGTaGCTTCCTCTGGGACAGCTT	+
Preference number: 5 (lower is better) Translates to: SSETFRGDTHLGSPPYLAWCWLW*LPLGQL Trigger: AAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 90 bp	CTGGCTATAACCGTTGTGAGTGGCACTGTTACTGTATGTAACTGTTaGTTGCCAGGAGACACCACTACTGGAACCTGGGTTGAAGCCTGT	+
Preference number: 5 (lower is better) Translates to: LAITVVSGTVTVCNC*LPGDTTTGTWVEAC Trigger: ACAGGCTTCAACCCAGGTTCCAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATACAGTAACAGTGCCACTCACAACGGTTATAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGAGGACCTGCTGTACTaGGGTGGGGCTGAGGACAAT	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFREDLLY*GGAEDN Trigger: ATTGTCCTCAGCCCCACCCAAGTACAGCAGGTCCTC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATGGTGCTGGCTATGGTaGCTTCCTCTGGGACAGCTT	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRWCWLW*LPLGQL Trigger: AAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 90 bp	AGTGCCTCGGCAGCCTCAATGGTCTCAATTGTTTCATCTCCATTATaGCAAGAAGCCTCAACTGTAAGGGTGATGTCGTCATCGTCATCG	+
Preference number: 5 (lower is better) Translates to: SASAASMVSIVSSPL*QEASTVRVMSSSSS Trigger: CGATGACGATGACGACATCACCCTTACAGTTGAGGCTTCTTGTCATAATGGAGATGAAACAATTGAGACCATTGAGGCTGCCGAGGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR CAA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAACTTCCACCGGATCTTaGGGGTTTGCAGCTTTAGAA	+
Preference number: 5 (lower is better) Translates to: SSETFRGDTHLGSPPYLATSTGS*GFAALE Trigger: TTCTAAAGCTGCAAACCCCAAAGATCCGGTGGAAGT...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCATTGGAACTGAAGAATTaGCTGCTTCCTCCTGCATGG	+
Preference number: 5 (lower is better) Translates to: SSETFRGDTHLGSPPYLALELKN*LLPPAW Trigger: CCATGCAGGAGGAAGCAGCAAATTCTTCAGTTCCAA...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGAGGACCTGCTGTACTaGGGTGGGGCTGAGGACAAT	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNEDLLY*GGAEDN Trigger: ATTGTCCTCAGCCCCACCCAAGTACAGCAGGTCCTC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS GCA 90 bp	TGTATAGTCCTAATACTTGGAACTGAAGAATTTGCTGCTTCCTCCTaGATGGTGCTGGCTATGGTTGCTTCCTCTGGGACAGCTTGTACT	+
Preference number: 5 (lower is better) Translates to: CIVLILGTEEFAASS*MVLAMVASSGTACT Trigger: AGTACAAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAATTCTTCAGTTCCAAGTATTAGGACTATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACCTCCATGCCGTTACTaGCAAATTCAAACACTAGGT	+
Preference number: 5 (lower is better) Translates to: SSETFRGDTHLGSPPYLAPPCRY*QIQTLG Trigger: ACCTAGTGTTTGAATTTGCAAGTAACGGCATGGAGG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCTGGGAGAATCTATATaGAGGAGTGCCTCGGCAGCC	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHLGESI*RSASAA Trigger: GGCTGCCGAGGCACTCCTCAATATAGATTCTCCCAG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATCTCGCTGCGTCCACTaGATGTACTTAGGACAGGTA	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKSRCVH*MYLGQV Trigger: TACCTGTCCTAAGTACATCAAGTGGACGCAGCGAGA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTGGTGCTGGCTATGGTaGCTTCCTCTGGGACAGCTT	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHWCWLW*LPLGQL Trigger: AAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 90 bp	CTTTCAGTACTGTCATGGGCTGTGACGATGGAATGGTTTGTAAAATaGATTTCTGAGACCCAGCACCTGATGATGGGTCTATGCTGGCTA	+
Preference number: 5 (lower is better) Translates to: LSVLSWAVTMEWFVK*ISETQHLMMGLCWL Trigger: TAGCCAGCATAGACCCATCATCAGGTGCTGGGTCTCAGAAATTCATTTTACAAACCATTCCATCGTCACAGCCCATGACAGTACTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAACTTCCACCGGATCTTaGGGGTTTGCAGCTTTAGAA	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRTSTGS*GFAALE Trigger: TTCTAAAGCTGCAAACCCCAAAGATCCGGTGGAAGT...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAATTGGAACTGAAGAATTaGCTGCTTCCTCCTGCATGG	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKLELKN*LLPPAW Trigger: CCATGCAGGAGGAAGCAGCAAATTCTTCAGTTCCAA...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACCTCCATGCCGTTACTaGCAAATTCAAACACTAGGT	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRPPCRY*QIQTLG Trigger: ACCTAGTGTTTGAATTTGCAAGTAACGGCATGGAGG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAACCTCCATGCCGTTACTaGCAAATTCAAACACTAGGT	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKPPCRY*QIQTLG Trigger: ACCTAGTGTTTGAATTTGCAAGTAACGGCATGGAGG...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAGTCTGCATTTGTCTCTaGCACTTGCTGAGTTTCCAT	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRVCICL*HLLSFH Trigger: ATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGAC...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAGTCTGCATTTGTCTCTaGCACTTGCTGAGTTTCCAT	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKVCICL*HLLSFH Trigger: ATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGAC...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTCTCGCTGCGTCCACTaGATGTACTTAGGACAGGTA	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNSRCVH*MYLGQV Trigger: TACCTGTCCTAAGTACATCAAGTGGACGCAGCGAGA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTCTCGCTGCGTCCACTaGATGTACTTAGGACAGGTA	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHSRCVH*MYLGQV Trigger: TACCTGTCCTAAGTACATCAAGTGGACGCAGCGAGA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGATTGCTTGATTCCGACTaGATGCGGTTGTTGACGATA	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRLLDSD*MRLLTI Trigger: TATCGTCAACAACCGCATCAAGTCGGAATCAAGCAA...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 90 bp	ACTGTATGTAACTGTTGGTTGCCAGGAGACACCACTACTGGAACCTaGGTTGAAGCCTGTATAGTCCTAATACTTGGAACTGAAGAATTT	+
Preference number: 5 (lower is better) Translates to: TVCNCWLPGDTTTGT*VEACIVLILGTEEF Trigger: AAATTCTTCAGTTCCAAGTATTAGGACTATACAGGCTTCAACCCAGGTTCCAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAATTTGTCTCTTGCACTaGCTGAGTTTCCATCACTTC	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKICLLH*LSFHHF Trigger: GAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAAT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGAATTTGTCTCTTGCACTaGCTGAGTTTCCATCACTTC	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRICLLH*LSFHHF Trigger: GAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAAT...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAAACTCTATGCTGGAACTaGGATCCTCATCATCTATGT	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKTLCWN*DPHHLC Trigger: ACATAGATGATGAGGATCCAAGTTCCAGCATAGAGT...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACTTCCACCGGATCTTaGGGGTTTGCAGCTTTAGAA	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTSTGS*GFAALE Trigger: TTCTAAAGCTGCAAACCCCAAAGATCCGGTGGAAGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTTGGAACTGAAGAATTaGCTGCTTCCTCCTGCATGG	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHLELKN*LLPPAW Trigger: CCATGCAGGAGGAAGCAGCAAATTCTTCAGTTCCAA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	AGTTCTGAGACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCACTTTTTCTCCACCTCTaGCTTAAGAGTTTTTGTTTC	+
Preference number: 5 (lower is better) Translates to: SSETFRGDTHLGSPPYLALFLHL*LKSFCF Trigger: GAAACAAAAACTCTTAAGCAAGAGGTGGAGAAAAAG...TGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGTCTCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	TCTTCATCGTCTAAACCTCCTGCTCCTTCACAACTGAGTTCTGAGACATTCAGACCTCAATGGTCTCAATaGTTTCATCTCCATTATGAC	+
Preference number: 5 (lower is better) Translates to: SSSSKPPAPSQLSSETFRPQWSQ*FHLHYD Trigger: GTCATAATGGAGATGAAACAATTGAGACCATTGAGG...TCTGAATGTCTCAGAACTCAGTTGTGAAGGAGCAGGAGGTTTAGACGATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGTCTGCATTTGTCTCTaGCACTTGCTGAGTTTCCAT	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNVCICL*HLLSFH Trigger: ATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGAC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTTGCTTGATTCCGACTaGATGCGGTTGTTGACGATA	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNLLDSD*MRLLTI Trigger: TATCGTCAACAACCGCATCAAGTCGGAATCAAGCAA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACATTTGTCTCTTGCACTaGCTGAGTTTCCATCACTTC	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNICLLH*LSFHHF Trigger: GAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAAT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACACTCCCAAAGGTAAATaGTGTTTCCCTTCCCATCTT	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHTPKGK*CFPSHL Trigger: AAGATGGGAAGGGAAACACAATTTACCTTTGGGAGT...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACTCCCAAAGGTAAATaGTGTTTCCCTTCCCATCTT	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTPKGK*CFPSHL Trigger: AAGATGGGAAGGGAAACACAATTTACCTTTGGGAGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACTGCAAGAATACCTCTTaGGTAATAGTACCTGAGTGC	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNCKNTS*VIVPEC Trigger: GCACTCAGGTACTATTACCAAAGAGGTATTCTTGCA...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACTGCAAGAATACCTCTTaGGTAATAGTACCTGAGTGC	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHCKNTS*VIVPEC Trigger: GCACTCAGGTACTATTACCAAAGAGGTATTCTTGCA...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACACTCTATGCTGGAACTaGGATCCTCATCATCTATGT	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNTLCWN*DPHHLC Trigger: ACATAGATGATGAGGATCCAAGTTCCAGCATAGAGT...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACACTCTATGCTGGAACTaGGATCCTCATCATCTATGT	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHTLCWN*DPHHLC Trigger: ACATAGATGATGAGGATCCAAGTTCCAGCATAGAGT...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACGACTTGAAGATACTCTaGATCGGTTTGCTTGATTCC	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHDLKIL*IGLLDS Trigger: GGAATCAAGCAAACCGATCAAGAGTATCTTCAAGTC...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ATAGCAGTCTCTCATTTAGCCCTCAGCTTACTACTAAGCCACAGTTTTAGTAACGACTTGAAGATACTCTaGATCGGTTTGCTTGATTCC	+
Preference number: 5 (lower is better) Translates to: IAVSHLALSLLLSHSFSNDLKIL*IGLLDS Trigger: GGAATCAAGCAAACCGATCAAGAGTATCTTCAAGTC...GTTACTAAAACTGTGGCTTAGTAGTAAGCTGAGGGCTAAATGAGAGACTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	ACATTCAGAGGAGACACACACTTGGGTTCGCCTCCTTATCTAGCAAAGTCAAAACTTTTTCTCCACCTCTaGCTTAAGAGTTTTTGTTTC	+
Preference number: 5 (lower is better) Translates to: TFRGDTHLGSPPYLAKSKLFLHL*LKSFCF Trigger: GAAACAAAAACTCTTAAGCAAGAGGTGGAGAAAAAG...TTTTGACTTTGCTAGATAAGGAGGCGAACCCAAGTGTGTGTCTCCTCTGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS-3UTR CAA 90 bp	CAACTGAAAAACAGTCAAGAATTTCTTCATCGTCTAAACCTCCTGCTCCTTCACCTTTTTCTCCACCTCTaGCTTAAGAGTTTTTGTTTC	+
Preference number: 5 (lower is better) Translates to: QLKNSQEFLHRLNLLLLHLFLHL*LKSFCF Trigger: GAAACAAAAACTCTTAAGCAAGAGGTGGAGAAAAAG...GTGAAGGAGCAGGAGGTTTAGACGATGAAGAAATTCTTGACTGTTTTTCAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	AACTCCGAGAGAAAGTCACCACAGGTGTCGTCGCGCTaGACGATGGTGCGGATGCCACACTGCCCGCTCCAT	+
Preference number: 6 (lower is better) Translates to: NSERKSPQVSSR*TMVRMPHCPLH Trigger: ATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTCAGCGCGACGACACCTGTGGTGACTTTCTCTCGGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	AGTGATCACAGTGCCCGGTGGGTGTGCGACCAGCTGTaGACTCCGAGAGAAAGTCACCACAGGTGTCGTCGC	+
Preference number: 6 (lower is better) Translates to: SDHSARWVCDQL*TPRESHHRCRR Trigger: GCGACGACACCTGTGGTGACTTTCTCTCGGAGTTCACAGCTGGTCGCACACCCACCGGGCACTGTGATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS GCA 72 bp	GAAAGTCACCACAGGTGTCGTCGCGCTGAACGATGGTaGGGATGCCACACTGCCCGCTCCATTGCAAATGGA	+
Preference number: 6 (lower is better) Translates to: ESHHRCRRAERW*GCHTARSIANG Trigger: TCCATTTGCAATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTCAGCGCGACGACACCTGTGGTGACTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	AGAGAAAGTCACCACAGGTGTCGTCGCGCTGAACGATaGTGCGGATGCCACACTGCCCGCTCCATTGCAAAT	+
Preference number: 6 (lower is better) Translates to: RESHHRCRRAER*CGCHTARSIAN Trigger: ATTTGCAATGGAGCGGGCAGTGTGGCATCCGCACCATCGTTCAGCGCGACGACACCTGTGGTGACTTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	TTTCTTTCTCTTGCGCTGCTCTGGGGAGGAGGCTCCTaGGGAGTCTGCATTTGTCTCTTGCACTTGCTGAGT	+
Preference number: 6 (lower is better) Translates to: FLSLALLWGGGS*GVCICLLHLLS Trigger: ACTCAGCAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	TTCTCTTGCGCTGCTCTGGGGAGGAGGCTCCTGGGGAGTCTGCATTaGTCTCTTGCACTTGCTGAGTTTCCATCACTTCAGGAATCCCAT	+
Preference number: 6 (lower is better) Translates to: FSCAALGRRLLGSLH*SLALAEFPSLQESH Trigger: ATGGGATTCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGCCTCCTCCCCAGAGCAGCGCAAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	GCTGGCTATGGTTGCTTCCTCTGGGACAGCTTGTACTaGCTGTACTACATGAACAGTTCGGAAGAGCTGGGT	+
Preference number: 6 (lower is better) Translates to: AGYGCFLWDSLY*LYYMNSSEELG Trigger: ACCCAGCTCTTCCGAACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCAGAGGAAGCAACCATAGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	TTCCTCCTGCATGGTGCTGGCTATGGTTGCTTCCTCTaGGACAGCTTGTACTGGCTGTACTACATGAACAGT	+
Preference number: 6 (lower is better) Translates to: FLLHGAGYGCFL*DSLYWLYYMNS Trigger: ACTGTTCATGTAGTACAGCCAGTACAAGCTGTCCCAGAGGAAGCAACCATAGCCAGCACCATGCAGGAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	TTTCATCCAGTACAGGAGGGCTGGGAGAATCTATATTaGGGAGTGCCTCGGCAGCCTCAATGGTCTCAATTG	+
Preference number: 6 (lower is better) Translates to: FHPVQEGWENLY*GVPRQPQWSQL Trigger: CAATTGAGACCATTGAGGCTGCCGAGGCACTCCTCAATATAGATTCTCCCAGCCCTCCTGTACTGGATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS GCA 72 bp	CAGTACAGGAGGGCTGGGAGAATCTATATTGAGGAGTaGCTCGGCAGCCTCAATGGTCTCAATTGTTTCATC	+
Preference number: 6 (lower is better) Translates to: QYRRAGRIYIEE*LGSLNGLNCFI Trigger: GATGAAACAATTGAGACCATTGAGGCTGCCGAGGCACTCCTCAATATAGATTCTCCCAGCCCTCCTGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS TCA 72 bp	GCTCCTGGGGAGTCTGCATTTGTCTCTTGCACTTGCTaGGTTTCCATCACTTCAGGAATCCCATCTAATGTG	+
Preference number: 6 (lower is better) Translates to: APGESAFVSCTC*VSITSGIPSNV Trigger: CACATTAGATGGGATTCCTGAAGTGATGGAAACTCAGCAAGTGCAAGAGACAAATGCAGACTCCCCAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS GCA 72 bp	CTAATACTTGGAACTGAAGAATTTGCTGCTTCCTCCTaGATGGTGCTGGCTATGGTTGCTTCCTCTGGGACA	+
Preference number: 6 (lower is better) Translates to: LILGTEEFAASS*MVLAMVASSGT Trigger: TGTCCCAGAGGAAGCAACCATAGCCAGCACCATGCAGGAGGAAGCAGCAAATTCTTCAGTTCCAAGTATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	ATCACTTCAGGAATCCCATCTAATGTGACGGACACATaGGTGATTGGGGCAACGATGTCATCTTCAGAGGAG	+
Preference number: 6 (lower is better) Translates to: ITSGIPSNVTDT*VIGATMSSSEE Trigger: CTCCTCTGAAGATGACATCGTTGCCCCAATCACCCATGTGTCCGTCACATTAGATGGGATTCCTGAAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 72 bp	TTTTCATCCAGTACAGGAGGGCTGGGAGAATCTATATaGAGGAGTGCCTCGGCAGCCTCAATGGTCTCAATT	+
Preference number: 6 (lower is better) Translates to: FSSSTGGLGESI*RSASAASMVSI Trigger: AATTGAGACCATTGAGGCTGCCGAGGCACTCCTCAATATAGATTCTCCCAGCCCTCCTGTACTGGATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS CAA 72 bp	GTTGTGAGTGGCACTGTTACTGTATGTAACTGTTGGTaGCCAGGAGACACCACTACTGGAACCTGGGTTGAA	+
Preference number: 6 (lower is better) Translates to: VVSGTVTVCNCW*PGDTTTGTWVE Trigger: TTCAACCCAGGTTCCAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATACAGTAACAGTGCCACTCACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	ACTGTCCTCAGAACTTCTGAAGGTTGTCCAACTTCCACCGGATCTTaGGGGTTTGCAGCTTTAGAATTCCCGGGCTTTAGAATTGTAGCG	+
Preference number: 6 (lower is better) Translates to: TVLRTSEGCPTSTGS*GFAALEFPGFRIVA Trigger: CGCTACAATTCTAAAGCCCGGGAATTCTAAAGCTGCAAACCCCAAAGATCCGGTGGAAGTTGGACAACCTTCAGAAGTTCTGAGGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	GCTATAACCGTTGTGAGTGGCACTGTTACTGTATGTAACTGTTGGTaGCCAGGAGACACCACTACTGGAACCTGGGTTGAAGCCTGTATA	+
Preference number: 6 (lower is better) Translates to: AITVVSGTVTVCNCW*PGDTTTGTWVEACI Trigger: TATACAGGCTTCAACCCAGGTTCCAGTAGTGGTGTCTCCTGGCAACCAACAGTTACATACAGTAACAGTGCCACTCACAACGGTTATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	GGCTGTGACGATGGAATGGTTTGTAAAATGAATTTCTaGGACCCAGCACCTGATGATGGGTCTATGCTGGCT	+
Preference number: 6 (lower is better) Translates to: GCDDGMVCKMNF*DPAPDDGSMLA Trigger: AGCCAGCATAGACCCATCATCAGGTGCTGGGTCTCAGAAATTCATTTTACAAACCATTCCATCGTCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	TTGGGCTCTAGCAGTTCATTCTGTTTGACGGCTACCTaGGAGGAAAACCCGTTTGAACTGGATAACACCATC	+
Preference number: 6 (lower is better) Translates to: LGSSSSFCLTAT*EENPFELDNTI Trigger: GATGGTGTTATCCAGTTCAAACGGGTTTTCCTCTCAGGTAGCCGTCAAACAGAATGAACTGCTAGAGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CCA 72 bp	AACTGTTGGTTGCCAGGAGACACCACTACTGGAACCTaGGTTGAAGCCTGTATAGTCCTAATACTTGGAACT	+
Preference number: 6 (lower is better) Translates to: NCWLPGDTTTGT*VEACIVLILGT Trigger: AGTTCCAAGTATTAGGACTATACAGGCTTCAACCCAGGTTCCAGTAGTGGTGTCTCCTGGCAACCAACAGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 72 bp	TTGATCGGTTTGCTTGATTCCGACTTGATGCGGTTGTaGACGATAAGGACTGATCCGAAGACTCTATGCTGG	+
Preference number: 6 (lower is better) Translates to: LIGLLDSDLMRL*TIRTDPKTLCW Trigger: CCAGCATAGAGTCTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 72 bp	CTCTTGATCGGTTTGCTTGATTCCGACTTGATGCGGTaGTTGACGATAAGGACTGATCCGAAGACTCTATGC	+
Preference number: 6 (lower is better) Translates to: LLIGLLDSDLMR*LTIRTDPKTLC Trigger: GCATAGAGTCTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 72 bp	AGAACTTCTGAAGGTTGTCCAACTTCCACCGGATCTTaGGGGTTTGCAGCTTTAGAATTCCCGGGCTTTAGA	+
Preference number: 6 (lower is better) Translates to: RTSEGCPTSTGS*GFAALEFPGFR Trigger: TCTAAAGCCCGGGAATTCTAAAGCTGCAAACCCCAAAGATCCGGTGGAAGTTGGACAACCTTCAGAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	TTGATTTGCTTTTCATCCAGTACAGGAGGGCTGGGAGAATCTATATaGAGGAGTGCCTCGGCAGCCTCAATGGTCTCAATTGTTTCATCT	+
Preference number: 6 (lower is better) Translates to: LICFSSSTGGLGESI*RSASAASMVSIVSS Trigger: AGATGAAACAATTGAGACCATTGAGGCTGCCGAGGCACTCCTCAATATAGATTCTCCCAGCCCTCCTGTACTGGATGAAAAGCAAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3
CDS CAA 90 bp	TTCCTGGACTTGAAGATACTCTTGATCGGTTTGCTTGATTCCGACTaGATGCGGTTGTTGACGATAAGGACTGATCCGAAGACTCTATGC	+
Preference number: 6 (lower is better) Translates to: FLDLKILLIGLLDSD*MRLLTIRTDPKTLC Trigger: GCATAGAGTCTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAGTATCTTCAAGTCCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	AAGATACTCTTGATCGGTTTGCTTGATTCCGACTTGATGCGGTTGTaGACGATAAGGACTGATCCGAAGACTCTATGCTGGAACTTGGAT	+
Preference number: 6 (lower is better) Translates to: KILLIGLLDSDLMRL*TIRTDPKTLCWNLD Trigger: ATCCAAGTTCCAGCATAGAGTCTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAGTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	TTGAAGATACTCTTGATCGGTTTGCTTGATTCCGACTTGATGCGGTaGTTGACGATAAGGACTGATCCGAAGACTCTATGCTGGAACTTG	+
Preference number: 6 (lower is better) Translates to: LKILLIGLLDSDLMR*LTIRTDPKTLCWNL Trigger: CAAGTTCCAGCATAGAGTCTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAGTATCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	ATTCCTGGACTTGAAGATACTCTTGATCGGTTTGCTTaGTTCCGACTTGATGCGGTTGTTGACGATAAGGAC	+
Preference number: 6 (lower is better) Translates to: IPGLEDTLDRFA*FRLDAVVDDKD Trigger: GTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAGTATCTTCAAGTCCAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 72 bp	TTGAAGATACTCTTGATCGGTTTGCTTGATTCCGACTaGATGCGGTTGTTGACGATAAGGACTGATCCGAAG	+
Preference number: 6 (lower is better) Translates to: LKILLIGLLDSD*MRLLTIRTDPK Trigger: CTTCGGATCAGTCCTTATCGTCAACAACCGCATCAAGTCGGAATCAAGCAAACCGATCAAGAGTATCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS TCA 72 bp	GTCATCGTCTATGATTTCTTCTTCAGCAACATCCAATaGGCTCTCAGTAATCATGTCATTAGGCTCTTCCAC	+
Preference number: 6 (lower is better) Translates to: VIVYDFFFSNIQ*ALSNHVIRLFH Trigger: GTGGAAGAGCCTAATGACATGATTACTGAGAGCTCATTGGATGTTGCTGAAGAAGAAATCATAGACGATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2
CDS CAA 90 bp	CTCAGCATCTTCATTCAAATCATCTTCGGCCTTTTTCTCCACCTCTaGCTTAAGAGTTTTTGTTTCCTGAGCTTTGATAACAGAAGTGAT	+
Preference number: 6 (lower is better) Translates to: LSIFIQIIFGLFLHL*LKSFCFLSFDNRSD Trigger: ATCACTTCTGTTATCAAAGCTCAGGAAACAAAAACTCTTAAGCAAGAGGTGGAGAAAAAGGCCGAAGATGATTTGAATGAAGATGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040131.13 ENSMUST00000110835.3 ENSMUST00000227192.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu