Pregenerated sensors for EFS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022203Ensembl transcript IDs: ENSMUST00000022813.8, ENSMUST00000227037.2, ENSMUST00000227587.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAGGCCCGTTTCAGGTTGGAAGGGGCAGCGTAAAGAGGAGGCCCTaGCTCCCGGCCCCCTTCCCACTCCGGATCCCGCTCCAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: RGPFQVGRGSVKRRP*LPAPFPLRIPLQLC Trigger: GCAGAGCTGGAGCGGGATCCGGAGTGGGAAGGGGGCCGGGAGCCAGGGCCTCCTCTTTACGCTGCCCCTTCCAACCTGAAACGGGCCTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 90 bp | GAGGCAGAGCAGGGTCGAGCTGGTGGTGGTATTACATACACCTCCTaGTCCTCACAGCCACGCTCTGGGGTGGGACATGATGAGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: EAEQGRAGGGITYTS*SSQPRSGVGHDEPG Trigger: GCCTGGCTCATCATGTCCCACCCCAGAGCGTGGCTGTGAGGAGCAGGAGGTGTATGTAATACCACCACCAGCTCGACCCTGCTCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR CCA 90 bp | GGGCCACAGGACAGGAAAAGGAGGCTGGGGAGTCATAGGGACAGCTaGAGGGAGCCCGGAGGATGTTGGGAGGCACATCATAGACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GPQDRKRRLGSHRDS*REPGGCWEAHHRPL Trigger: CAGAGGTCTATGATGTGCCTCCCAACATCCTCCGGGCTCCCTCCAGCTGTCCCTATGACTCCCCAGCCTCCTTTTCCTGTCCTGTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR TCA 90 bp | CATCCCATTGCCTCGGGGGACCTTGTAGATGGAGTCAGAAGAGGGTaGGCAGGATCTAGCTGGAAGTCCCGAGGCAGAGCAGGGTCGAGC | + |
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Preference number: 1 (lower is better) Translates to: HPIASGDLVDGVRRG*AGSSWKSRGRAGSS Trigger: GCTCGACCCTGCTCTGCCTCGGGACTTCCAGCTAGATCCTGCTCACCCTCTTCTGACTCCATCTACAAGGTCCCCCGAGGCAATGGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 90 bp | CATAGACCTCTGCCACGTCTCTGGAGGCAGTCAGCTGCATCCCATTaGCTCGGGGGACCTTGTAGATGGAGTCAGAAGAGGGTGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: HRPLPRLWRQSAASH*LGGPCRWSQKRVSR Trigger: CCTGCTCACCCTCTTCTGACTCCATCTACAAGGTCCCCCGAGGCAATGGGATGCAGCTGACTGCCTCCAGAGACGTGGCAGAGGTCTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 90 bp | GCTCTGGGGACGGTGGCTCTGGCCCCAGCAGAGGCACATCGTAAATaGCTTCATCTGCATCCCTGCTTTCTCCATTTGCCAGGAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: ALGTVALAPAEAHRK*LHLHPCFLHLPGVP Trigger: AGGAACTCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAGGCATTTACGATGTGCCTCTGCTGGGGCCAGAGCCACCGTCCCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR TCA 90 bp | TGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTTaGGCAGAGCCGAGGCCCGTTTCAGGTTGGAAGGGGCAGCGTAAA | + |
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Preference number: 1 (lower is better) Translates to: CFLHLPGVPRVLRTG*AEPRPVSGWKGQRK Trigger: TTTACGCTGCCCCTTCCAACCTGAAACGGGCCTCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 90 bp | TTCATCTGCATCCCTGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTaGTTCGTACAGGTTGAGCAGAGCCGAGGCCCGTTTCAGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: FICIPAFSICQEFLG*FVQVEQSRGPFQVG Trigger: TCCAACCTGAAACGGGCCTCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 90 bp | AGGCACATCGTAAATGCCTTCATCTGCATCCCTGCTTTCTCCATTTaGCAGGAGTTCCTCGGGTGCTTCGTACAGGTTGAGCAGAGCCGA | + |
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Preference number: 1 (lower is better) Translates to: RHIVNAFICIPAFSI*QEFLGCFVQVEQSR Trigger: TCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAGGCATTTACGATGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR CCA 90 bp | TCCACACAGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATaGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAA | + |
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Preference number: 1 (lower is better) Translates to: STQDNEENPVPPYPR*PDACLDKARNIKYK Trigger: TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCTGTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCACTCCGGATCCCGCTCCAGCTCTGCAGGTGGCTTTAAGGCCAGAGGCCCTCTGCCACGTCTCTaGAGGCAGTCAGCTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: PSHSGSRSSSAGGFKARGPLPRL*RQSAAS Trigger: GGATGCAGCTGACTGCCTCCAGAGACGTGGCAGAGG...GCCTCTGGCCTTAAAGCCACCTGCAGAGCTGGAGCGGGATCCGGAGTGGGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCCGGATCCCGCTCCAGCTCTGCAGGTGGCTTTAAGGCCAGAGGCACATCGAGCCACGCTCTGGGGTaGGACATGATGAGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSGSRSSSAGGFKARGTSSHALG*DMMSQA Trigger: AGCCTGGCTCATCATGTCCCACCCCAGAGCGTGGCT...CGATGTGCCTCTGGCCTTAAAGCCACCTGCAGAGCTGGAGCGGGATCCGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCAGGTCAGTGGAGGAAGAAGCCACTGGAGGCTCTGGGGACGGTGGCTCTCTTCATCTGCATCCCTaGTTTCTCCATTTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSRSVEEEATGGSGDGGSLHLHP*FLHLPG Trigger: TCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAG...AGAGCCACCGTCCCCAGAGCCTCCAGTGGCTTCTTCCTCCACTGACCTGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCTCCCTACCCCAGATaGCCTGATGCCTGCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SKITVCVSQEWGRVPGLVPPYPR*PDACLD Trigger: GTCCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGG...GACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTTGAGCAGAGCGCTTCATCCTCTCTaGGGGGCTGTGGGACAACTG | + |
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Preference number: 2 (lower is better) Translates to: LLSPFARSSSGASYRLSRALHPL*GAVGQL Trigger: CAGTTGTCCCACAGCCCCCCAGAGAGGATGAAGCGC...TCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATCCCTGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTTAGTCATAGGGACAGCTaGAGGGAGCCCGGAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: CIPAFSICQEFLGCFVQVSHRDS*REPGGC Trigger: ACATCCTCCGGGCTCCCTCCAGCTGTCCCTATGACT...AACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGGATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGTCCTCAACACGGAGTaGAGGGCTCTGGTAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CGTKFQPPDFLCSKLPKAVLNTE*RALVGR Trigger: CCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGAC...TGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGTGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATCTGCATCCCTGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTGCTTCGACAGGAAAAGGAGGCTaGGGAGTCATAGGGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSSASLLSPFARSSSGASTGKGG*GVIGTA Trigger: AGCTGTCCCTATGACTCCCCAGCCTCCTTTTCCTGT...CGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR CAA 90 bp | TCAAGCTTTCAAGAAGCAGAGTCAGGAACCATACGGCAGCGTTTATaGAGGTGCATGCCATGCCTGTCTGTGGCCGGCTCTCCTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: SSFQEAESGTIRQRL*RCMPCLSVAGSPDL Trigger: CAAGTCAGGAGAGCCGGCCACAGACAGGCATGGCATGCACCTCAATAAACGCTGCCGTATGGTTCCTGACTCTGCTTCTTGAAAGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCACATCGTAAATGCCTTCATCTGCATCCCTGCTTTCTCCATTTGCCAGGAGGAGTCAGAAGAGGGTaGGCAGGATCTAGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EAHRKCLHLHPCFLHLPGGVRRG*AGSSWK Trigger: CTTCCAGCTAGATCCTGCTCACCCTCTTCTGACTCC...TCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAGGCATTTACGATGTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCACATCGTAAATGCCTTCATCTGCATCCCTGCTTTCTCCATTTGCCAGGAGGGGGACCTTGTAGATaGAGTCAGAAGAGGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: EAHRKCLHLHPCFLHLPGGGPCR*SQKRVS Trigger: GCTCACCCTCTTCTGACTCCATCTACAAGGTCCCCC...TCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAGGCATTTACGATGTGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCGGTGAGTGGCTAAAATaGCCGAAAGAGATGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: KITVCVSQEWGRVPGLVPGEWLK*PKEMNL Trigger: GAGGTTCATCTCTTTCGGTCATTTTAGCCACTCACC...GGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR GCA 90 bp | TCGAATAGGTCTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGTCCTCAACACGGAGTaGAGGGCTCTGGTAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SNRSLEQNYSMCLTGMGKVLNTE*RALVGR Trigger: CCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGAC...CTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAGACCTATTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGGTGAGTGGCTAAAATaGCCGAAAGAGATGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPGEWLK*PKEMNL Trigger: GAGGTTCATCTCTTTCGGTCATTTTAGCCACTCACC...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAATAGGTCTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGCTCTCCTGACTTGTaGGGGGAGAAGCTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SNRSLEQNYSMCLTGMGKGSPDL*GEKLSG Trigger: ACCAGAGAGCTTCTCCCCTCACAAGTCAGGAGAGCC...CTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAGACCTATTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCAGGGGAGAAGCTCTCTaGTGTTTCTCAGACTATTAC | + |
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Preference number: 2 (lower is better) Translates to: LWSKITVCVSQEWGRVPGRGEAL*CFSDYY Trigger: GTAATAGTCTGAGAAACACCAGAGAGCTTCTCCCCT...GCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTTTCTCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCAAGTTTCAGCCACCTaGTTTTCTGTGTTCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: WCFSDYYIVIFSQETGQRQVSAT*FSVFQT Trigger: AGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTG...CCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGAGAAACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| 3UTR TCA 72 bp | CATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTTaGGCAGAGCCGAGGCCCGTTTCAGGTTGGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: HLPGVPRVLRTG*AEPRPVSGWKG Trigger: CCCCTTCCAACCTGAAACGGGCCTCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 72 bp | CTGCCACGTCTCTGGAGGCAGTCAGCTGCATCCCATTaGCTCGGGGGACCTTGTAGATGGAGTCAGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LPRLWRQSAASH*LGGPCRWSQKR Trigger: CCTCTTCTGACTCCATCTACAAGGTCCCCCGAGGCAATGGGATGCAGCTGACTGCCTCCAGAGACGTGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR CCA 72 bp | AGTCATAGGGACAGCTGGAGGGAGCCCGGAGGATGTTaGGAGGCACATCATAGACCTCTGCCACGTCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SHRDSWREPGGC*EAHHRPLPRLW Trigger: CCAGAGACGTGGCAGAGGTCTATGATGTGCCTCCCAACATCCTCCGGGCTCCCTCCAGCTGTCCCTATGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 72 bp | GCAGAGTCAGGAACCATACGGCAGCGTTTATTGAGGTaGATGCCATGCCTGTCTGTGGCCGGCTCTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: AESGTIRQRLLR*MPCLSVAGSPD Trigger: GTCAGGAGAGCCGGCCACAGACAGGCATGGCATGCACCTCAATAAACGCTGCCGTATGGTTCCTGACTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR GCA 72 bp | CAGGGTCGAGCTGGTGGTGGTATTACATACACCTCCTaGTCCTCACAGCCACGCTCTGGGGTGGGACATGAT | + |
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Preference number: 3 (lower is better) Translates to: QGRAGGGITYTS*SSQPRSGVGHD Trigger: ATCATGTCCCACCCCAGAGCGTGGCTGTGAGGAGCAGGAGGTGTATGTAATACCACCACCAGCTCGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 72 bp | AGCCCGGAGGATGTTGGGAGGCACATCATAGACCTCTaGCACGTCTCTGGAGGCAGTCAGCTGCATCCCATT | + |
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Preference number: 3 (lower is better) Translates to: SPEDVGRHIIDL*HVSGGSQLHPI Trigger: AATGGGATGCAGCTGACTGCCTCCAGAGACGTGGCAGAGGTCTATGATGTGCCTCCCAACATCCTCCGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR GCA 72 bp | ATCCCTGCTTTCTCCATTTGCCAGGAGTTCCTCGGGTaGTTCGTACAGGTTGAGCAGAGCCGAGGCCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: IPAFSICQEFLG*FVQVEQSRGPF Trigger: AAACGGGCCTCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
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| 3UTR TCA 72 bp | ATGCCATGCCTGTCTGTGGCCGGCTCTCCTGACTTGTaGGGGGAGAAGCTCTCTGGTGTTTCTCAGACTATT | + |
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Preference number: 3 (lower is better) Translates to: MPCLSVAGSPDL*GEKLSGVSQTI Trigger: AATAGTCTGAGAAACACCAGAGAGCTTCTCCCCTCACAAGTCAGGAGAGCCGGCCACAGACAGGCATGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| 3UTR GCA 72 bp | AAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTaGCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KLQYVSHRNGEG*QASSPQAFKKQ Trigger: CTGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| 3UTR CCA 72 bp | GATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATaGCCTGATGCCTGCCTGGACAAAGCAAGAAATATT | + |
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Preference number: 3 (lower is better) Translates to: DNEENPVPPYPR*PDACLDKARNI Trigger: AATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR GCA 90 bp | AGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGGAAGGCTGTGCAGCCCCCACCTGTaGTCTGAGAGCTGCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SRPQHGVQGSGRQGRGRLCSPHL*SESCRG Trigger: GCCTCTGCAGCTCTCAGAGCACAGGTGGGGGCTGCA...CAGCCTTCCCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CCA 90 bp | GAACCTCTAGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGGGGCCTGTGTTGGGGTaGGGAGCTTCTGGTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EPLAVLNTECRALVGRGGGPVLG*GASGRK Trigger: CTTCCGACCAGAAGCTCCCCACCCCAACACAGGCCC...CCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCTAGAGGTTC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CCA 90 bp | AGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGGAAGGCTGGGGACAGGCTCTCAGTaGATGGTAGCCTGGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRPQHGVQGSGRQGRGRLGTGSQ*MVAWAC Trigger: ACAGGCCCAGGCTACCATCCACTGAGAGCCTGTCCC...CAGCCTTCCCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR GCA 90 bp | AGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCGCTGGCCACGAGAGCTaGCACGGCAGCTTGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RITRRIQSLPTPDGLMPAAGHES*HGSLQS Trigger: GCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGC...GGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR GCA 90 bp | ATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGCCTGTCCTGGATACTaGCCTTTCGGCCTGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ITRRIQSLPTPDGLMPAWACPGY*PFGLGQ Trigger: CTGCCCCAGGCCGAAAGGGCAGTATCCAGGACAGGC...CCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CCA 90 bp | GAACCTCTAGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGGGGGGACCTTGTAGATaGAGTCAGAAGAGGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: EPLAVLNTECRALVGRGGGGPCR*SQKRVS Trigger: GCTCACCCTCTTCTGACTCCATCTACAAGGTCCCCC...CCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCTAGAGGTTC 61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CCA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGTGGGGACGGTGGCTCTaGCCCCAGCAGAGGCACATC | + |
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Preference number: 4 (lower is better) Translates to: VPNSPRQKAVQRPPHRITWGRWL*PQQRHI Trigger: GATGTGCCTCTGCTGGGGCCAGAGCCACCGTCCCCA...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CCA 90 bp | GATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGACTGCCCTTTCGGCCTaGGGCAGGAGAAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: DNEENPVPPYPRWPDACLTALSA*GRRRSW Trigger: CCAGCTCCTTCTCCTGCCCCAGGCCGAAAGGGCAGT...CAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR TCA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGCTAAGGCAGCCCCCTTaGCAGCAAGCACAGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VPNSPRQKAVQRPPHRITLRQPP*QQAQWP Trigger: GGGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAG...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCTGCAGCCCCCACCTGTaGTCTGAGAGCTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKAVQRPPHRITRRIQSLCSPHL*SESCRG Trigger: GCCTCTGCAGCTCTCAGAGCACAGGTGGGGGCTGCA...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAGAGTCAGGAACCATACGGGCCAGCATTGTGCCTaGAGCCCCCACCTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GARPRPLKLSRSRVRNHTGQHCA*SPHLCS Trigger: AGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCC...CGTATGGTTCCTGACTCTGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGCTAGGCTTGGGTGCTaGGCCAGCAGGAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITRRIQSLPTPDGLMPAWARLGC*ASRKEL Trigger: AAGCTCCTTCCTGCTGGCCCAGCACCCAAGCCTAGC...CCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAATGAGCCAGGCTGGGTaGGAGATGCTGGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSQEWGRVPGLVPSSFQEMSQAG*EMLGRG Trigger: GCCTCTGCCCAGCATCTCCCACCCAGCCTGGCTCAT...TTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | AGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCGCGCTTCATCCTCTCTaGGGGGCTGTGGGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RITRRIQSLPTPDGLMPAALHPL*GAVGQL Trigger: CAGTTGTCCCACAGCCCCCCAGAGAGGATGAAGCGC...GGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCACAGTGGATGGTAGCCTaGGCCTGTGTTGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEWGRVPGLVPSSFQEAQWMVA*ACVGVG Trigger: CCCCACCCCAACACAGGCCCAGGCTACCATCCACTG...TGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCCAGTGGATGGTAGCCTaGGCCTGTGTTGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKAVQRPPHRITRRIQSLQWMVA*ACVGVG Trigger: CCCCACCCCAACACAGGCCCAGGCTACCATCCACTG...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCACTGCCCTTTCGGCCTaGGGCAGGAGAAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKAVQRPPHRITRRIQSLTALSA*GRRRSW Trigger: CCAGCTCCTTCTCCTGCCCCAGGCCGAAAGGGCAGT...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCAGTGGACAGGACCAGTaGCTCCTCTGGGGACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDNEENPVPPYPRWPDACSGQDQ*LLWGQS Trigger: GCTCTGTCCCCAGAGGAGCCACTGGTCCTGTCCACT...GCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCGACATGGTGGCTGGTTaGCCTGGGTGCTGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QKAVQRPPHRITRRIQSLDMVAG*PGCWPR Trigger: TCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTC...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGGACATGGTGGCTGGTTaGCCTGGGTGCTGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KLPKAEGSPATSTQDNEEDMVAG*PGCWPR Trigger: TCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTC...CTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| 3UTR CAA 72 bp | CCATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTaGAGCAGAGCCGAGGCCCGTTTCAGGTTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFARSSSGASYR*SRAEARFRLEG Trigger: CCCTTCCAACCTGAAACGGGCCTCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
||
| CDS-3UTR TCA 90 bp | AGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGGAAGGCTGCCTTCATATTCATTGTaGGGGCCTGCTGGATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPQHGVQGSGRQGRGRLPSYSL*GPAGSL Trigger: CAATGATCCAGCAGGCCCTCACAATGAATATGAAGG...CAGCCTTCCCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR TCA 90 bp | ATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGGCAGCTTGCAGAGCTaGGTAATGGCTCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ITRRIQSLPTPDGLMPAWGSLQS*VMALAL Trigger: CAGTGCCAGAGCCATTACTCAGCTCTGCAAGCTGCC...CCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCGAGGCTAGGCTTGGGTaGTGGGCCAGCAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPDFLCSKLPKAEGSPATEARLG*WASRKE Trigger: CTCCTTCCTGCTGGCCCAGCACCCAAGCCTAGCCTC...GGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGTTTGGGCCAGCATTGTaGCTGCAGCCCCCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSMCLTGMGKGARPRPLKFGPAL*LQPPPV Trigger: CACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAA...CTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAAGCCACGCTCTGGGGTaGGACATGATGAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQEWGRVPGLVPSSFQEASHALG*DMMSQA Trigger: AGCCTGGCTCATCATGTCCCACCCCAGAGCGTGGCT...TGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAGAGTCAGGAACCATACCCTCTGCCACGTCTCTaGAGGCAGTCAGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GCQASSPQAFKKQSQEPYPLPRL*RQSAAS Trigger: GGATGCAGCTGACTGCCTCCAGAGACGTGGCAGAGG...GTATGGTTCCTGACTCTGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGGGACAGGCTCTCAGTaGATGGTAGCCTGGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQEWGRVPGLVPSSFQEGTGSQ*MVAWAC Trigger: ACAGGCCCAGGCTACCATCCACTGAGAGCCTGTCCC...TTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | GATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGCCTGCTGGATCATTaGCTACCTCCCTGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DNEENPVPPYPRWPDACLGLLDH*LPPCTL Trigger: CAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCC...CAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | GATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGGCACAAAGAGACATaGTGGCTGGTTGGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNEENPVPPYPRWPDACLGHKET*WLVGLG Trigger: ACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCC...CAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGACAAACACCAGGCGGTaGGCAGCCACCACCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPNSPRQKAVQRPPHRITTNTRR*AATTTL Trigger: AAGAGTGGTGGTGGCTGCTCACCGCCTGGTGTTTGT...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAGAGTCAGGAACCATACGCATTGGCTACCTCCCTaGACTCTGGATCTCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GARPRPLKLSRSRVRNHTHWLPP*TLDLPR Trigger: CCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATG...CGTATGGTTCCTGACTCTGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCGCTCTGGCACTGCCCTaGGTAGAAGTGCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDNEENPVPPYPRWPDACALALP*VEVQKL Trigger: CAACTTCTGCACTTCTACGCAGGGCAGTGCCAGAGC...GCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | GATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGCTCTGGCACTGCCCTaGGTAGAAGTGCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DNEENPVPPYPRWPDACLALALP*VEVQKL Trigger: CAACTTCTGCACTTCTACGCAGGGCAGTGCCAGAGC...CAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGAGTCATAGGGACAGCTaGAGGGAGCCCGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FCVPNSPRQKAVQRPPHRSHRDS*REPGGC Trigger: ACATCCTCCGGGCTCCCTCCAGCTGTCCCTATGACT...CCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCAGGCCCGTTTCAGGTTaGAAGGGGCAGCGTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QDNEENPVPPYPRWPDACRPVSG*KGQRKE Trigger: CTCTTTACGCTGCCCCTTCCAACCTGAAACGGGCCT...GCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCGGGCCTGTGTTGGGGTaGGGAGCTTCTGGTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKLQYVSHRNGEGCQASSGPVLG*GASGRK Trigger: CTTCCGACCAGAAGCTCCCCACCCCAACACAGGCCC...GGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCACAAAGAGACATGGTaGCTGGTTGGCCTGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDNEENPVPPYPRWPDACHKETW*LVGLGA Trigger: AGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTG...GCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGAAGCAGAGTCAGGAACCATACGGCAGCGTTTATTGAGGTGCATGCCATGGCTGGTTGGCCTGGGTaGTGGCCACGAGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSRVRNHTAAFIEVHAMAGWPG*WPRELP Trigger: TGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGC...CATGGCATGCACCTCAATAAACGCTGCCGTATGGTTCCTGACTCTGCTTCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCGCTGGTTGGCCTGGGTaGTGGCCACGAGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGAGWPG*WPRELP Trigger: TGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGC...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCACGCCATCTCTTGGACTaGAGTGTCAGATGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQEWGRVPGLVPSSFQEARHLLD*SVRWVA Trigger: GGCTACCCATCTGACACTGCAGTCCAAGAGATGGCG...TGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGCGCCATCTCTTGGACTaGAGTGTCAGATGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCVPNSPRQKAVQRPPHRRHLLD*SVRWVA Trigger: GGCTACCCATCTGACACTGCAGTCCAAGAGATGGCG...CCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATTTGCCAGGAGTTCCTCGGGTGCTTCGTACAGGTTGAGCAGAGCCGACGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSICQEFLGCFVQVEQSRRKDSS*GDSAVL Trigger: CAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCG...TCGGCTCTGCTCAACCTGTACGAAGCACCCGAGGAACTCCTGGCAAATGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAAGCAGAGTCAGGAACCATACCAGTGTCCAGGTCAGTaGAGGAAGAAGCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCQASSPQAFKKQSQEPYQCPGQ*RKKPLE Trigger: CTCCAGTGGCTTCTTCCTCCACTGACCTGGACACTG...GTATGGTTCCTGACTCTGCTTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGGGGTGGGGAGCTTCTaGTCGGAAGCTGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CGTKFQPPDFLCSKLPKAGVGSF*SEAGPQ Trigger: CTGTGGCCCAGCTTCCGACCAGAAGCTCCCCACCCC...TGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGTGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCCTGTCCTGGATACTaGCCTTTCGGCCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPACPGY*PFGLGQ Trigger: CTGCCCCAGGCCGAAAGGGCAGTATCCAGGACAGGC...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKLQYVSHRNGEGCQASSRKDSS*GDSAVL Trigger: CAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCG...GGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCAGTCATAGGGACAGCTaGAGGGAGCCCGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AKLQYVSHRNGEGCQASSSHRDS*REPGGC Trigger: ACATCCTCCGGGCTCCCTCCAGCTGTCCCTATGACT...GGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCACAGGAAAAGGAGGCTaGGGAGTCATAGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKAVQRPPHRITRRIQSLTGKGG*GVIGTA Trigger: AGCTGTCCCTATGACTCCCCAGCCTCCTTTTCCTGT...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATGGGGTGGGGAGCTTCTaGTCGGAAGCTGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTPDGLMPAWTKQEILNGVGSF*SEAGPQ Trigger: CTGTGGCCCAGCTTCCGACCAGAAGCTCCCCACCCC...ATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| 3UTR CAA 72 bp | CAAGAAGCAGAGTCAGGAACCATACGGCAGCGTTTATaGAGGTGCATGCCATGCCTGTCTGTGGCCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEAESGTIRQRL*RCMPCLSVAGS Trigger: AGAGCCGGCCACAGACAGGCATGGCATGCACCTCAATAAACGCTGCCGTATGGTTCCTGACTCTGCTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGATCTCCCTCGGGTTTaGGGCCCCCATAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPDLPRV*GPHNQA Trigger: TGCCTGGTTATGGGGGCCTCAAACCCGAGGGAGATC...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGCACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGATCTCCCTCGGGTTTaGGGCCCCCATAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGTKFQPPDFLCSKLPKADLPRV*GPHNQA Trigger: TGCCTGGTTATGGGGGCCTCAAACCCGAGGGAGATC...TGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGTGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAATTCATTGTGAGGGCCTaGTGGATCATTGGCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQEWGRVPGLVPSSFQEFIVRA*WIIGYL Trigger: GAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAA...TTCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCATTTGGGCCAGCATTGTaGCTGCAGCCCCCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPFGPAL*LQPPPV Trigger: CACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAA...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCGCGCTTCATCCTCTCTaGGGGGCTGTGGGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSHLIFCVPNSPRQKAVALHPL*GAVGQL Trigger: CAGTTGTCCCACAGCCCCCCAGAGAGGATGAAGCGC...GACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGCAATTCAGGATCCACTaGGAAAGCTTTATCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSHRNGEGCQASSPQAFKQFRIH*ESFIQG Trigger: CCCCTGGATAAAGCTTTCCCAGTGGATCCTGAATTG...CTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCAGTGGACAGGACCAGTaGCTCCTCTGGGGACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSHLIFCVPNSPRQKAVSGQDQ*LLWGQS Trigger: GCTCTGTCCCCAGAGGAGCCACTGGTCCTGTCCACT...GACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGAAGCAGAGTCAGGAACCATACGGCAGCGTTTATTGAGGTGCATGCCATGAAGAGACATGGTGGCTaGTTGGCCTGGGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSRVRNHTAAFIEVHAMKRHGG*LAWVLA Trigger: GGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTT...CATGGCATGCACCTCAATAAACGCTGCCGTATGGTTCCTGACTCTGCTTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCGTGGCCCGCAGAGTTTaGGCCAGCATTGTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSHLIFCVPNSPRQKAVVARRV*ASIVPA Trigger: TGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCAC...GACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAACAGGACAGAGGCTCTGTGTGGCACCAAGTTTCAGCCACCTGATTTTGGCAGCTTGCAGAGCTaGGTAATGGCTCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PRNRTEALCGTKFQPPDFGSLQS*VMALAL Trigger: CAGTGCCAGAGCCATTACTCAGCTCTGCAAGCTGCC...AAAATCAGGTGGCTGAAACTTGGTGCCACACAGAGCCTCTGTCCTGTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCGCAGGGACAATACCCTaGTGGCCATGCAGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGAGTIP*WPCREQ Trigger: CTGCTCTCTGCATGGCCAGCAGGGTATTGTCCCTGC...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCACATTGGCTACCTCCCTaGACTCTGGATCTCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPHWLPP*TLDLPR Trigger: CCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATG...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGTGGGGACGGTGGCTCTaGCCCCAGCAGAGGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVWGRWL*PQQRHI Trigger: GATGTGCCTCTGCTGGGGCCAGAGCCACCGTCCCCA...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCGGCCTGCTGGATCATTaGCTACCTCCCTGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGGLLDH*LPPCTL Trigger: CAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCC...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCACAAAGAGACATGGTaGCTGGTTGGCCTGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKITVCVSQEWGRVPGLVHKETW*LVGLGA Trigger: AGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTG...GACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCGGAGTCAGAAGAGGGTaGGCAGGATCTAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWSKITVCVSQEWGRVPGGVRRG*AGSSWK Trigger: CTTCCAGCTAGATCCTGCTCACCCTCTTCTGACTCC...GCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCGGAGTCAGAAGAGGGTaGGCAGGATCTAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGGVRRG*AGSSWK Trigger: CTTCCAGCTAGATCCTGCTCACCCTCTTCTGACTCC...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTTCTCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGGCTGGCCACGAGAGCTaGCACGGCAGCTTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCFSDYYIVIFSQETGQRAGHES*HGSLQS Trigger: GCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGC...CCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGAGAAACACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGCTGGGTGGGAGATGCTaGGCAGAGGCTAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVLGGRC*AEARLG Trigger: CCCAAGCCTAGCCTCTGCCCAGCATCTCCCACCCAG...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGGGGGACCTTGTAGATaGAGTCAGAAGAGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGTKFQPPDFLCSKLPKAGGPCR*SQKRVS Trigger: GCTCACCCTCTTCTGACTCCATCTACAAGGTCCCCC...TGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGTGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCACAGTGTCCAGGTCAGTaGAGGAAGAAGCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQPPDFLCSKLPKAEGSPQCPGQ*RKKPLE Trigger: CTCCAGTGGCTTCTTCCTCCACTGACCTGGACACTG...TGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCATTGTGAGGGCCTGCTaGATCATTGGCTACCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKITVCVSQEWGRVPGLVIVRAC*IIGYLP Trigger: AGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAAT...GACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGGTAAATGCCTTCATCTaGATCCCTGCTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FCVPNSPRQKAVQRPPHRVNAFI*IPAFSI Trigger: AATGGAGAAAGCAGGGATGCAGATGAAGGCATTTAC...CCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGCCTCTGCCACGTCTCTaGAGGCAGTCAGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVPLPRL*RQSAAS Trigger: GGATGCAGCTGACTGCCTCCAGAGACGTGGCAGAGG...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCACAGGAAAAGGAGGCTaGGGAGTCATAGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGTGKGG*GVIGTA Trigger: AGCTGTCCCTATGACTCCCCAGCCTCCTTTTCCTGT...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGAAGAGACATGGTGGCTaGTTGGCCTGGGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVKRHGG*LAWVLA Trigger: GGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTT...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR TCA 90 bp | TACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAACTAAGGCAGCCCCCTTaGCAGCAAGCACAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YPRWPDACLDKARNIKYKLRQPP*QQAQWP Trigger: GGGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAG...TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAAGGCCAGCATTGTGCCTaGAGCCCCCACCTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPRWPDACLDKARNIKYKGQHCA*SPHLCS Trigger: AGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCC...TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCCTTCATCTGCATCCCTaGTTTCTCCATTTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGLHLHP*FLHLPG Trigger: TCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAG...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCCAATTCAGGATCCACTaGGAAAGCTTTATCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGQFRIH*ESFIQG Trigger: CCCCTGGATAAAGCTTTCCCAGTGGATCCTGAATTG...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAAGTGGCCCGCAGAGTTTaGGCCAGCATTGTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPRWPDACLDKARNIKYKVARRV*ASIVPA Trigger: TGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCAC...TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGATTGTGAGGGCCTGCTaGATCATTGGCTACCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVIVRAC*IIGYLP Trigger: AGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAAT...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAAGGGCACAAAGAGACATaGTGGCTGGTTGGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPRWPDACLDKARNIKYKGHKET*WLVGLG Trigger: ACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCC...TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCTGTGTGTTCATTGTGAGGGCCTaGTGGATCATTGGCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDYYIVIFSQETGQRLCVFIVRA*WIIGYL Trigger: GAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAA...CACACAGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCAGATGGCCTGATGCCTGCCTGGACAAAGCAAGAAATATTAAATATAAAAGGCCCGTTTCAGGTTaGAAGGGGCAGCGTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPRWPDACLDKARNIKYKRPVSG*KGQRKE Trigger: CTCTTTACGCTGCCCCTTCCAACCTGAAACGGGCCT...TTTATATTTAATATTTCTTGCTTTGTCCAGGCAGGCATCAGGCCATCTGGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| 3UTR CAA 72 bp | GGGGAGAAGCTCTCTGGTGTTTCTCAGACTATTACATaGTCATCTTCAGCCAAGAAACAGGACAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEKLSGVSQTIT*SSSAKKQDRGS Trigger: AGAGCCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGAGAAACACCAGAGAGCTTCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR GCA 90 bp | TCGAATAGGTCTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGCTTCATCTGCATCCCTaGTTTCTCCATTTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNRSLEQNYSMCLTGMGKLHLHP*FLHLPG Trigger: TCCTGGCAAATGGAGAAAGCAGGGATGCAGATGAAG...CTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAGACCTATTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS GCA 90 bp | GACAGCAAGCACAGTGGCCCGCAGAGTTTGGGCCAGCATTGTGCCTaGAGCCCCCACCTGTGCTCTGAGAGCTGCAGAGGCTGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSKHSGPQSLGQHCA*SPHLCSESCRGCQP Trigger: CGGCTGGCAGCCTCTGCAGCTCTCAGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | GCCACCACCACTCTTTTGCCGTGGGGCACAAAGAGACATGGTGGCTaGTTGGCCTGGGTGCTGGCCACGAGAGCTGCCACGGCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATTTLLPWGTKRHGG*LAWVLATRAATAAC Trigger: GCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | AGCAGCCACCACCACTCTTTTGCCGTGGGGCACAAAGAGACATGGTaGCTGGTTGGCCTGGGTGCTGGCCACGAGAGCTGCCACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSHHHSFAVGHKETW*LVGLGAGHESCHGS Trigger: GCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTGGTGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | GTGAGCAGCCACCACCACTCTTTTGCCGTGGGGCACAAAGAGACATaGTGGCTGGTTGGCCTGGGTGCTGGCCACGAGAGCTGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSHHHSFAVGHKET*WLVGLGAGHESCHG Trigger: GCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTGGTGGCTGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS TCA 90 bp | GCAGAGTTTGGGCCAGCATTGTGCCTGCAGCCCCCACCTGTGCTCTaGGAGCTGCAGAGGCTGCCAGCCGGCCTAGGGTGTCTCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: AEFGPALCLQPPPVL*ELQRLPAGLGCLQQ Trigger: TTGTTGGAGACACCCTAGGCCGGCTGGCAGCCTCTGCAGCTCTCAGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | TGCCGTGGGGCACAAAGAGACATGGTGGCTGGTTGGCCTGGGTGCTaGCCACGAGAGCTGCCACGGCAGCTTGCAGAGCTGAGTAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRGAQRDMVAGWPGC*PRELPRQLAELSNG Trigger: GCCATTACTCAGCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | CCTAAGGCAGCCCCCTTGACAGCAAGCACAGTGGCCCGCAGAGTTTaGGCCAGCATTGTGCCTGCAGCCCCCACCTGTGCTCTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKAAPLTASTVARRV*ASIVPAAPTCALRA Trigger: AGCTCTCAGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | ACTCTTTTGCCGTGGGGCACAAAGAGACATGGTGGCTGGTTGGCCTaGGTGCTGGCCACGAGAGCTGCCACGGCAGCTTGCAGAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLPWGTKRHGGWLA*VLATRAATAACRAE Trigger: CTCAGCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS TCA 90 bp | GAGGCTGCCAGCCGGCCTAGGGTGTCTCCAACAAACACCAGGCGGTaGGCAGCCACCACCACTCTTTTGCCGTGGGGCACAAAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: EAASRPRVSPTNTRR*AATTTLLPWGTKRH Trigger: ATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTGGTGGCTGCTCACCGCCTGGTGTTTGTTGGAGACACCCTAGGCCGGCTGGCAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | CTCTGCAGTACCCGTAGAACATCCCCTCGGCGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTGTCGTACAATGCCCGGGCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCSTRRTSPRRKDSS*GDSAVLSYNARASW Trigger: CCAGCTTGCCCGGGCATTGTACGACAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCGCCGAGGGGATGTTCTACGGGTACTGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS CCA 90 bp | GGAGCTTCACTCCGTAGAACATCCCCTCGGCGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTGTCGTACAATGCCCGGGCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GASLRRTSPRRKDSS*GDSAVLSYNARASW Trigger: CCAGCTTGCCCGGGCATTGTACGACAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCGCCGAGGGGATGTTCTACGGAGTGAAGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
||
| CDS GCA 90 bp | AGAGAGCAGAGGCACCAACCATCAAGTCCACCAGCACCCTCCCTCTaGAGTACCCGTAGAACATCCCCTCGGCGGAAGGACAGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: REQRHQPSSPPAPSL*STRRTSPRRKDSSW Trigger: CCAGGAACTGTCCTTCCGCCGAGGGGATGTTCTACGGGTACTGCAGAGGGAGGGTGCTGGTGGACTTGATGGTTGGTGCCTCTGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS GCA 90 bp | TTTTGCCGTGGGGCACAAAGAGACATGGTGGCTGGTTGGCCTGGGTaGTGGCCACGAGAGCTGCCACGGCAGCTTGCAGAGCTGAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FCRGAQRDMVAGWPG*WPRELPRQLAELSN Trigger: ATTACTCAGCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | TTCATTGTGAGGGCCTGCTGGATCATTGGCTACCTCCCTGCACTCTaGATCTCCCTCGGGTTTGAGGCCCCCATAACCAGGCAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIVRACWIIGYLPAL*ISLGFEAPITRQAG Trigger: CCCTGCCTGCCTGGTTATGGGGGCCTCAAACCCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | TGCGTAGAAGTGCAGAAGTTGGAGGTCTCCAGTGGACAGGACCAGTaGCTCCTCTGGGGACAGAGCTTCCTTCCGTTCCGCCAGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CVEVQKLEVSSGQDQ*LLWGQSFLPFRQSP Trigger: AGGGGACTGGCGGAACGGAAGGAAGCTCTGTCCCCAGAGGAGCCACTGGTCCTGTCCACTGGAGACCTCCAACTTCTGCACTTCTACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAGAGTTTGGGCCAGCATaGTGCCTGCAGCCCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTGMGKGARPRPLKLSREFGPA*CLQPPP Trigger: AGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTC...TCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGGAGTTTGGGCCAGCATaGTGCCTGCAGCCCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSPRQKAVQRPPHRITEFGPA*CLQPPP Trigger: AGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTC...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCAGTGGCCCGCAGAGTTaGGGCCAGCATTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKAVQRPPHRITRRIQSLSGPQS*GQHCAC Trigger: GCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACT...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCCCTAAGGCAGCCCCCTaGACAGCAAGCACAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKAVQRPPHRITRRIQSLPKAAP*TASTVA Trigger: GGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAGG...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS TCA 90 bp | TCTCTTGGACTGCAGTGTCAGATGGGTAGCCTAAGGCAGCCCCCTTaGCAGCAAGCACAGTGGCCCGCAGAGTTTGGGCCAGCATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGLQCQMGSLRQPP*QQAQWPAEFGPALC Trigger: GCACAATGCTGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAGGCTACCCATCTGACACTGCAGTCCAAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 90 bp | TCTGGCACTGCCCTGCGTAGAAGTGCAGAAGTTGGAGGTCTCCAGTaGACAGGACCAGTGGCTCCTCTGGGGACAGAGCTTCCTTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGTALRRSAEVGGLQ*TGPVAPLGTELPSV Trigger: AACGGAAGGAAGCTCTGTCCCCAGAGGAGCCACTGGTCCTGTCCACTGGAGACCTCCAACTTCTGCACTTCTACGCAGGGCAGTGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGGGGCCTGCTGGATCATaGGCTACCTCCCTGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSPRQKAVQRPPHRITGPAGS*ATSLHS Trigger: AGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCC...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGAGGAGAATCCAGTCCCTCCCCTGCTTTCTCCATTaGCCAGGAGTTCCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QKAVQRPPHRITRRIQSLPCFLH*PGVPRV Trigger: CACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGG...GAGGGACTGGATTCTCCTCGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCTCCACACAGGATAACGCCCTGCTTTCTCCATTaGCCAGGAGTTCCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPNSPRQKAVQRPPHRITPCFLH*PGVPRV Trigger: CACCCGAGGAACTCCTGGCAAATGGAGAAAGCAGGG...CGTTATCCTGTGTGGAGGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTCACAGGAATGGGGAAGGGTGCCAGGCCTCGTCCCCTCAAGCTTTCAAGAGCATCGCGCCATCTCTaGGACTGCAGTGTCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CLTGMGKGARPRPLKLSRASRHL*DCSVRW Trigger: CCATCTGACACTGCAGTCCAAGAGATGGCGCGATGC...TCTTGAAAGCTTGAGGGGACGAGGCCTGGCACCCTTCCCCATTCCTGTGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| CDS-3UTR CAA 90 bp | GAACCTCTAGCCGTCCTCAACACGGAGTGCAGGGCTCTGGTAGGCAGGGGAGGGCATATTCCTCGGCCATaGGGATGCCTTCATATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPLAVLNTECRALVGRGGHIPRP*GCLHIH Trigger: ATGAATATGAAGGCATCCCAATGGCCGAGGAATATG...CCCTCCCCTGCCTACCAGAGCCCTGCACTCCGTGTTGAGGACGGCTAGAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | ATAACGAGGAGAATCCAGTCCCTCCCTACCCCAGATGGCCTGATGCCTGCCTGGGTAGAAGTGCAGAAGTaGGAGGTCTCCAGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ITRRIQSLPTPDGLMPAWVEVQK*EVSSGQ Trigger: CTGTCCACTGGAGACCTCCAACTTCTGCACTTCTAC...CCAGGCAGGCATCAGGCCATCTGGGGTAGGGAGGGACTGGATTCTCCTCGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CAA 90 bp | CCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCAGTCCAGCGACCGCATCGCGCCATCTCTaGGACTGCAGTGTCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PPDFLCSKLPKAEGSPATASRHL*DCSVRW Trigger: CCATCTGACACTGCAGTCCAAGAGATGGCGCGATGC...GGTCGCTGGACTGCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS GCA 90 bp | ATATTCCTCGGCCATTGGGATGCCTTCATATTCATTGTGAGGGCCTaGTGGATCATTGGCTACCTCCCTGCACTCTGGATCTCCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLGHWDAFIFIVRA*WIIGYLPALWISLG Trigger: CCCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 90 bp | TTCCTCGGCCATTGGGATGCCTTCATATTCATTGTGAGGGCCTGCTaGATCATTGGCTACCTCCCTGCACTCTGGATCTCCCTCGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGHWDAFIFIVRAC*IIGYLPALWISLGF Trigger: AAACCCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCAGGCGGGCCTGCTGGATCATaGGCTACCTCCCTGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWSKITVCVSQEWGRVPGGPAGS*ATSLHS Trigger: AGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCC...GCCTGGCACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| CDS-3UTR CAA 90 bp | ATAGGTCTTTGGAGCAAAATTACAGTATGTGTCTCACAGGAATGGGGAAGGGTGCCTAAGGCAGCCCCCTaGACAGCAAGCACAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IGLWSKITVCVSQEWGRVPKAAP*TASTVA Trigger: GGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAGG...CACCCTTCCCCATTCCTGTGAGACACATACTGTAATTTTGCTCCAAAGACCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| CDS GCA 90 bp | CCACACCCTTCAGATGCACGTAGTCATATTCCTCGGCCATTGGGATaGCTTCATATTCATTGTGAGGGCCTGCTGGATCATTGGCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: PHPSDARSHIPRPLG*LHIHCEGLLDHWLP Trigger: AGGTAGCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGAAGGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGTTTCAGCCACCTGATTTTCTGTGTTCCAAACTCCCCAAGGCAGAAGGCGTAGAAGTGCAGAAGTaGGAGGTCTCCAGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: TKFQPPDFLCSKLPKAEGVEVQK*EVSSGQ Trigger: CTGTCCACTGGAGACCTCCAACTTCTGCACTTCTAC...GCCTTCTGCCTTGGGGAGTTTGGAACACAGAAAATCAGGTGGCTGAAACTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS-3UTR CAA 90 bp | TGGTGTTTCTCAGACTATTACATTGTCATCTTCAGCCAAGAAACAGGACAGAGGAGTGGCCCGCAGAGTTaGGGCCAGCATTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WCFSDYYIVIFSQETGQRSGPQS*GQHCAC Trigger: GCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACT...CCTCTGTCCTGTTTCTTGGCTGAAGATGACAATGTAATAGTCTGAGAAACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 90 bp | TGTATCCACACCCTTCAGATGCACGTAGTCATATTCCTCGGCCATTaGGATGCCTTCATATTCATTGTGAGGGCCTGCTGGATCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CIHTLQMHVVIFLGH*DAFIFIVRACWIIG Trigger: GCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGAAGGGTGTGGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS TCA 72 bp | GGGCCAGCATTGTGCCTGCAGCCCCCACCTGTGCTCTaGGAGCTGCAGAGGCTGCCAGCCGGCCTAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPALCLQPPPVL*ELQRLPAGLGC Trigger: ACACCCTAGGCCGGCTGGCAGCCTCTGCAGCTCTCAGAGCACAGGTGGGGGCTGCAGGCACAATGCTGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | CCGTGGGGCACAAAGAGACATGGTGGCTGGTTGGCCTaGGTGCTGGCCACGAGAGCTGCCACGGCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWGTKRHGGWLA*VLATRAATAAC Trigger: GCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS TCA 72 bp | TGGCTACCTCCCTGCACTCTGGATCTCCCTCGGGTTTaGGGCCCCCATAACCAGGCAGGCAGGGTGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WLPPCTLDLPRV*GPHNQAGRVGE Trigger: CTCCCCCACCCTGCCTGCCTGGTTATGGGGGCCTCAAACCCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | GCCCCCTTGACAGCAAGCACAGTGGCCCGCAGAGTTTaGGCCAGCATTGTGCCTGCAGCCCCCACCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: APLTASTVARRV*ASIVPAAPTCA Trigger: AGCACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTCAAGGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CAA 72 bp | AGCCCCCTTGACAGCAAGCACAGTGGCCCGCAGAGTTaGGGCCAGCATTGTGCCTGCAGCCCCCACCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLDSKHSGPQS*GQHCACSPHLC Trigger: GCACAGGTGGGGGCTGCAGGCACAATGCTGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTCAAGGGGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | GGCCTGTGTTGGGGTGGGGAGCTTCTGGTCGGAAGCTaGGCCACAGTGTCCAGGTCAGTGGAGGAAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLCWGGELLVGS*ATVSRSVEEEA Trigger: GGCTTCTTCCTCCACTGACCTGGACACTGTGGCCCAGCTTCCGACCAGAAGCTCCCCACCCCAACACAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | GCACAAAGAGACATGGTGGCTGGTTGGCCTGGGTGCTaGCCACGAGAGCTGCCACGGCAGCTTGCAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AQRDMVAGWPGC*PRELPRQLAEL Trigger: CAGCTCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CAA 90 bp | ACCACCACTCTTTTGCCGTGGGGCACAAAGAGACATGGTGGCTGGTaGGCCTGGGTGCTGGCCACGAGAGCTGCCACGGCAGCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTTLLPWGTKRHGGW*AWVLATRAATAACR Trigger: TCTGCAAGCTGCCGTGGCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS TCA 72 bp | AGCCGGCCTAGGGTGTCTCCAACAAACACCAGGCGGTaGGCAGCCACCACCACTCTTTTGCCGTGGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRPRVSPTNTRR*AATTTLLPWGT Trigger: TGTGCCCCACGGCAAAAGAGTGGTGGTGGCTGCTCACCGCCTGGTGTTTGTTGGAGACACCCTAGGCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 72 bp | CACCACTCTTTTGCCGTGGGGCACAAAGAGACATGGTaGCTGGTTGGCCTGGGTGCTGGCCACGAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HHSFAVGHKETW*LVGLGAGHESC Trigger: GCAGCTCTCGTGGCCAGCACCCAGGCCAACCAGCCACCATGTCTCTTTGTGCCCCACGGCAAAAGAGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS TCA 72 bp | CTGCAGTGTCAGATGGGTAGCCTAAGGCAGCCCCCTTaGCAGCAAGCACAGTGGCCCGCAGAGTTTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQCQMGSLRQPP*QQAQWPAEFGP Trigger: TGGCCCAAACTCTGCGGGCCACTGTGCTTGCTGTCAAGGGGGCTGCCTTAGGCTACCCATCTGACACTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS GCA 72 bp | AGGCACCAACCATCAAGTCCACCAGCACCCTCCCTCTaGAGTACCCGTAGAACATCCCCTCGGCGGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RHQPSSPPAPSL*STRRTSPRRKD Trigger: GTCCTTCCGCCGAGGGGATGTTCTACGGGTACTGCAGAGGGAGGGTGCTGGTGGACTTGATGGTTGGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS GCA 72 bp | AGCAGACCATCGAGTAGGGTGGTAAAGCGTAGGGCCTaGCCTGCAAGCTCTGCCACGCATCGCGCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRPSSRVVKRRA*PASSATHRAIS Trigger: AGAGATGGCGCGATGCGTGGCAGAGCTTGCAGGGCAGGCCCTACGCTTTACCACCCTACTCGATGGTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 72 bp | ACCCGTAGAACATCCCCTCGGCGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTGTCGTACAATGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TRRTSPRRKDSS*GDSAVLSYNAR Trigger: CCGGGCATTGTACGACAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCGCCGAGGGGATGTTCTACGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
||
| CDS CCA 72 bp | AGGGCCTGCTGGATCATTGGCTACCTCCCTGCACTCTaGATCTCCCTCGGGTTTGAGGCCCCCATAACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RACWIIGYLPAL*ISLGFEAPITR Trigger: CCTGGTTATGGGGGCCTCAAACCCGAGGGAGATCCAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 72 bp | GTGCAGAAGTTGGAGGTCTCCAGTGGACAGGACCAGTaGCTCCTCTGGGGACAGAGCTTCCTTCCGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VQKLEVSSGQDQ*LLWGQSFLPFR Trigger: GCGGAACGGAAGGAAGCTCTGTCCCCAGAGGAGCCACTGGTCCTGTCCACTGGAGACCTCCAACTTCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 72 bp | CTCCGTAGAACATCCCCTCGGCGGAAGGACAGTTCCTaGGGGGACTCTGCAGTGTTGTCGTACAATGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRTSPRRKDSS*GDSAVLSYNAR Trigger: CCGGGCATTGTACGACAACACTGCAGAGTCCCCCCAGGAACTGTCCTTCCGCCGAGGGGATGTTCTACGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227587.2 |
||
| CDS CAA 72 bp | ATGGCTCTGGCACTGCCCTGCGTAGAAGTGCAGAAGTaGGAGGTCTCCAGTGGACAGGACCAGTGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MALALPCVEVQK*EVSSGQDQWLL Trigger: GAGGAGCCACTGGTCCTGTCCACTGGAGACCTCCAACTTCTGCACTTCTACGCAGGGCAGTGCCAGAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
||
| CDS CCA 72 bp | AGCTGGAAGTCCCGAGGCAGAGCAGGGTCGAGCTGGTaGTGGTATTACATACACCGACGTGGCAATGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SWKSRGRAGSSW*WYYIHRRGNGH Trigger: ATGGCCATTGCCACGTCGGTGTATGTAATACCACCACCAGCTCGACCCTGCTCTGCCTCGGGACTTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227037.2 |
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| CDS GCA 72 bp | GGAAGGAGCTTCACTCTGTTAGCAGGGACAATACCCTaGTGGCCATGCAGAGAGCAGAGGCACCAACCATCA | + |
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Preference number: 6 (lower is better) Translates to: GRSFTLLAGTIP*WPCREQRHQPS Trigger: TGATGGTTGGTGCCTCTGCTCTCTGCATGGCCAGCAGGGTATTGTCCCTGCTAACAGAGTGAAGCTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| CDS CCA 72 bp | TTCCGCCAGTCCCCTCTCCAGCAATTCAGGATCCACTaGGAAAGCTTTATCCAGGGGTCTAGAACCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FRQSPLQQFRIH*ESFIQGSRTLS Trigger: GCTCAGGGTTCTAGACCCCTGGATAAAGCTTTCCCAGTGGATCCTGAATTGCTGGAGAGGGGACTGGCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | AGGAGCTTCACTCTGTTAGCAGGGACAATACCCTGCTaGCCATGCAGAGAGCAGAGGCACCAACCATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: RSFTLLAGTIPC*PCREQRHQPSS Trigger: ACTTGATGGTTGGTGCCTCTGCTCTCTGCATGGCCAGCAGGGTATTGTCCCTGCTAACAGAGTGAAGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022813.8 |
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| CDS TCA 72 bp | TATTCCTCGGCCATTGGGATGCCTTCATATTCATTGTaGGGGCCTGCTGGATCATTGGCTACCTCCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: YSSAIGMPSYSL*GPAGSLATSLH Trigger: GTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | CATTGGGATGCCTTCATATTCATTGTGAGGGCCTGCTaGATCATTGGCTACCTCCCTGCACTCTGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: HWDAFIFIVRAC*IIGYLPALWIS Trigger: GGAGATCCAGAGTGCAGGGAGGTAGCCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CCA 72 bp | ACCCTTCAGATGCACGTAGTCATATTCCTCGGCCATTaGGATGCCTTCATATTCATTGTGAGGGCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TLQMHVVIFLGH*DAFIFIVRACW Trigger: CCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CAA 72 bp | CACCCTTCAGATGCACGTAGTCATATTCCTCGGCCATaGGGATGCCTTCATATTCATTGTGAGGGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HPSDARSHIPRP*GCLHIHCEGLL Trigger: CAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGAAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS CAA 90 bp | CTGTATCCACACCCTTCAGATGCACGTAGTCATATTCCTCGGCCATaGGGATGCCTTCATATTCATTGTGAGGGCCTGCTGGATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: LYPHPSDARSHIPRP*GCLHIHCEGLLDHW Trigger: CCAATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGAAGGGTGTGGATACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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| CDS GCA 72 bp | TCAGATGCACGTAGTCATATTCCTCGGCCATTGGGATaGCTTCATATTCATTGTGAGGGCCTGCTGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: SDARSHIPRPLG*LHIHCEGLLDH Trigger: ATGATCCAGCAGGCCCTCACAATGAATATGAAGGCATCCCAATGGCCGAGGAATATGACTACGTGCATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022813.8 ENSMUST00000227037.2 |
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