Pregenerated sensors for EFHD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040659Ensembl transcript IDs: ENSMUST00000036854.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTGGCCAGAGAACAAGACACGTAGGGATGGCCAGAGAGGATGCTaGTGGCTGGCATCACAGCCGCATGAACCGCAGGAGAGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RWPENKTRRDGQRGC*WLASQPHEPQERAG Trigger: CCCTGCCCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCTTGTTCTCTGGCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | CAGAGAACAAGACACGTAGGGATGGCCAGAGAGGATGCTGCTGGCTaGCATCACAGCCGCATGAACCGCAGGAGAGGGCAGGGCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QRTRHVGMAREDAAG*HHSRMNRRRGQGRD Trigger: GTCCCTGCCCTGCCCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCTTGTTCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | TGGCCAGAGAACAAGACACGTAGGGATGGCCAGAGAGGATGCTGCTaGCTGGCATCACAGCCGCATGAACCGCAGGAGAGGGCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WPENKTRRDGQRGCC*LASQPHEPQERAGQ Trigger: CTGCCCTGCCCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCTTGTTCTCTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 90 bp | CCTATCACTCACATCCCCAAGGCATGCCTGGCAGAGTGTAGCCTGTaGGGTAGATTCGCACAGTGGCCTTCACCCTGCCTGGCTGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PITHIPKACLAECSL*GRFAQWPSPCLAGP Trigger: GGGCCCAGCCAGGCAGGGTGAAGGCCACTGTGCGAATCTACCTCACAGGCTACACTCTGCCAGGCATGCCTTGGGGATGTGAGTGATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 90 bp | ACAGAGCTCTCCAGCAGGAGTGCCTTCCTCCCCAGGCTCCTGATGTaGCGGCCCAGATCCAGCGACCTCATCCTGATCCTGTCCACCTTT | + |
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Preference number: 1 (lower is better) Translates to: TELSSRSAFLPRLLM*RPRSSDLILILSTF Trigger: AAAGGTGGACAGGATCAGGATGAGGTCGCTGGATCTGGGCCGTCACATCAGGAGCCTGGGGAGGAAGGCACTCCTGCTGGAGAGCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | TGGGTGGGTGGAGAAAGTAGCTGGTACCAAAGGCAGGGGCGTGAATaGGCTGAAGTTGGGCTAGAGCAGGCAGCAAGGTGGCCAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: WVGGESSWYQRQGRE*AEVGLEQAARWPEN Trigger: GTTCTCTGGCCACCTTGCTGCCTGCTCTAGCCCAACTTCAGCCCATTCACGCCCCTGCCTTTGGTACCAGCTACTTTCTCCACCCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTaGTACCAAAGGCAGGGGCGTGAATGGGCTGAAGTTGGGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: GRPIVKGSWVGGESS*YQRQGREWAEVGLE Trigger: CTCTAGCCCAACTTCAGCCCATTCACGCCCCTGCCTTTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | ACTCTCTGCTGGACCATGGCAGGGCGGCCTATAGTTAAGGGGAGTTaGGTGGGTGGAGAAAGTAGCTGGTACCAAAGGCAGGGGCGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TLCWTMAGRPIVKGS*VGGESSWYQRQGRE Trigger: TTCACGCCCCTGCCTTTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCCTGCCATGGTCCAGCAGAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 90 bp | CAGGAGAGGGCAGGGCAGGGACCAACCACCGAGGAGACTCCTGAATaGGATCGGGTCACATATCGTTTGCGGTTTTTAGTAGTGGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: QERAGQGPTTEETPE*DRVTYRLRFLVVVR Trigger: CCGGACCACTACTAAAAACCGCAAACGATATGTGACCCGATCTCATTCAGGAGTCTCCTCGGTGGTTGGTCCCTGCCCTGCCCTCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 90 bp | ACCGCAGGAGAGGGCAGGGCAGGGACCAACCACCGAGGAGACTCCTaGATGAGATCGGGTCACATATCGTTTGCGGTTTTTAGTAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TAGEGRAGTNHRGDS*MRSGHISFAVFSSG Trigger: ACCACTACTAAAAACCGCAAACGATATGTGACCCGATCTCATTCAGGAGTCTCCTCGGTGGTTGGTCCCTGCCCTGCCCTCTCCTGCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 90 bp | GCTGAACATTGCATAACGGTGGCCCCGGTGGCCATTCACTTAGACTaGGTGACGTCACAGTTTCACAACACAGCAACGGACACGCACATA | + |
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Preference number: 1 (lower is better) Translates to: AEHCITVAPVAIHLD*VTSQFHNTATDTHI Trigger: TATGTGCGTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 90 bp | TGTAGTAAAATAAAGAGTTATCGAGCTTCACAAGCAGTGACACGCTaGACATTGCATAACGGTGGCCCCGGTGGCCATTCACTTAGACTG | + |
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Preference number: 1 (lower is better) Translates to: CSKIKSYRASQAVTR*TLHNGGPGGHSLRL Trigger: CAGTCTAAGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGCGTGTCACTGCTTGTGAAGCTCGATAACTCTTTATTTTACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR GCA 90 bp | CACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTGAAATCAGCTTAGAGTGCGGCCAGAGAGGATGCTaGTGGCTGGCATCACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: HSGLHPAWLGPIEISLECGQRGC*WLASQP Trigger: CGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCC...GCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGGTGACAAACCCAAGGAAGGAGAGTGTGAAAGGGGTGCCGGCCCCGAGTCCCAGAGAGGATGCTGCTaGCTGGCATCACAGCCGCAT | + |
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Preference number: 2 (lower is better) Translates to: TGDKPKEGECERGAGPESQRGCC*LASQPH Trigger: ATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTG...GGACTCGGGGCCGGCACCCCTTTCACACTCTCCTTCCTTGGGTTTGTCACCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACCCCTGTACCCACCCGTaGCCCCAGACCGCACACGGG | + |
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Preference number: 2 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHPCTHP*PQTAHG Trigger: CCCGTGTGCGGTCTGGGGGCACGGGTGGGTACAGGG...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | TCACTCACATCCCCAAGGCATGCCTGGCAGAGTGTAGCCTGTGAGGTAGATTCGACAGAGAGCAGGACCTaGGAGCTAGTCTCCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: SLTSPRHAWQSVACEVDSTESRT*ELVSHR Trigger: TCTGTGGGAGACTAGCTCCCAGGTCCTGCTCTCTGT...CGAATCTACCTCACAGGCTACACTCTGCCAGGCATGCCTTGGGGATGTGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTGAAATCAGCTTAGAGTGCTTAAGGGGAGTTGGGTaGGTGGAGAAAGTAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HSGLHPAWLGPIEISLECLRGVG*VEKVAG Trigger: ACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAA...GCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACGAGCAGGCAGCAAGGTaGCCAGAGAACAAGACACGT | + |
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Preference number: 2 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHEQAAR*PENKTR Trigger: ACGTGTCTTGTTCTCTGGCCACCTTGCTGCCTGCTC...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACATCAGAGATGGGGCCTaGTCTGAAAGGAAGCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHIRDGA*SERKRP Trigger: AGGACGCTTCCTTTCAGATCAGGCCCCATCTCTGAT...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGTAGTGCTTAGATCAGGAGTGTTTGTAGATGCTAAGGGACAGAGCTCTCTCTCCACAGCCCCTTaGGACCCTCAGCTTGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: IQVVLRSGVFVDAKGQSSLSTAP*DPQLAA Trigger: CGCAGCAAGCTGAGGGTCCCAAGGGGCTGTGGAGAG...AGAGCTCTGTCCCTTAGCATCTACAAACACTCCTGATCTAAGCACTACCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGTAGTGCTTAGATCAGGAGTGTTTGTAGATGCTAAGGGACAGAGCTCTGGTAGATTCGCACAGTaGCCTTCACCCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: IQVVLRSGVFVDAKGQSSGRFAQ*PSPCLA Trigger: AGCCAGGCAGGGTGAAGGCCACTGTGCGAATCTACC...AGAGCTCTGTCCCTTAGCATCTACAAACACTCCTGATCTAAGCACTACCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGTAGTGCTTAGATCAGGAGTGTTTGTAGATGCTAAGGGACAGAGCTCTTTCACCCTGCCTGGCTaGGCCCCATTGAAATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: IQVVLRSGVFVDAKGQSSFTLPG*APLKSA Trigger: AGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAA...AGAGCTCTGTCCCTTAGCATCTACAAACACTCCTGATCTAAGCACTACCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | TCCGCTGAGGCAAACGCAAGCCAAGGCCACGGCAGCTaGGCTGGGCTGGGCTTGGCTCGGCCCCTCCGATTC | + |
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Preference number: 3 (lower is better) Translates to: SAEANASQGHGS*AGLGLARPLRF Trigger: GAATCGGAGGGGCCGAGCCAAGCCCAGCCCAGCCCAGCTGCCGTGGCCTTGGCTTGCGTTTGCCTCAGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR GCA 72 bp | ACGGCACGGGTTTCACTGTGGCCTGGGGAGTCCCCATaGGAGTCTACGGGTGGGCACGACAGGCTGGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: TARVSLWPGESP*ESTGGHDRLVP Trigger: TGGCACCAGCCTGTCGTGCCCACCCGTAGACTCGCATGGGGACTCCCCAGGCCACAGTGAAACCCGTGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | CCAGAGAGGATGCTGCTGGCTGGCATCACAGCCGCATaGACCGCAGGAGAGGGCAGGGCAGGGACCAACCAC | + |
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Preference number: 3 (lower is better) Translates to: PERMLLAGITAA*TAGEGRAGTNH Trigger: GTGGTTGGTCCCTGCCCTGCCCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | TCCAGCAGGAGTGCCTTCCTCCCCAGGCTCCTGATGTaGCGGCCCAGATCCAGCGACCTCATCCTGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SSRSAFLPRLLM*RPRSSDLILIL Trigger: CAGGATCAGGATGAGGTCGCTGGATCTGGGCCGTCACATCAGGAGCCTGGGGAGGAAGGCACTCCTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | AGACACGTAGGGATGGCCAGAGAGGATGCTGCTGGCTaGCATCACAGCCGCATGAACCGCAGGAGAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RHVGMAREDAAG*HHSRMNRRRGQ Trigger: CTGCCCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | GCACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTaGAATCAGCTTAGAGTGCTAGGGCCTGGATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: AQWPSPCLAGPH*NQLRVLGPGSP Trigger: AGGAGATCCAGGCCCTAGCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | CACATCCCCAAGGCATGCCTGGCAGAGTGTAGCCTGTaGGGTAGATTCGCACAGTGGCCTTCACCCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: HIPKACLAECSL*GRFAQWPSPCL Trigger: CAGGCAGGGTGAAGGCCACTGTGCGAATCTACCTCACAGGCTACACTCTGCCAGGCATGCCTTGGGGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR GCA 72 bp | GAGAACAAGACACGTAGGGATGGCCAGAGAGGATGCTaGTGGCTGGCATCACAGCCGCATGAACCGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ENKTRRDGQRGC*WLASQPHEPQE Trigger: CTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCTTGTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | AACAAGACACGTAGGGATGGCCAGAGAGGATGCTGCTaGCTGGCATCACAGCCGCATGAACCGCAGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NKTRRDGQRGCC*LASQPHEPQER Trigger: CCTCTCCTGCGGTTCATGCGGCTGTGATGCCAGCCAGCAGCATCCTCTCTGGCCATCCCTACGTGTCTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | GAAAGGAAGCGTCCTGGGGAGGGTCTCACTCTCTGCTaGACCATGGCAGGGCGGCCTATAGTTAAGGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: ERKRPGEGLTLC*TMAGRPIVKGS Trigger: ACTCCCCTTAACTATAGGCCGCCCTGCCATGGTCCAGCAGAGAGTGAGACCCTCCCCAGGACGCTTCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | GTTTTTAGTAGTGGTCCGGGCACAGAGAGCAGGACCTaGGAGCTAGTCTCCCACAGATCCCCTGTACCCACC | + |
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Preference number: 3 (lower is better) Translates to: VFSSGPGTESRT*ELVSHRSPVPT Trigger: GGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCAGGTCCTGCTCTCTGTGCCCGGACCACTACTAAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | GGAGAAAGTAGCTGGTACCAAAGGCAGGGGCGTGAATaGGCTGAAGTTGGGCTAGAGCAGGCAGCAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GESSWYQRQGRE*AEVGLEQAARW Trigger: CCACCTTGCTGCCTGCTCTAGCCCAACTTCAGCCCATTCACGCCCCTGCCTTTGGTACCAGCTACTTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | GAATGGGCTGAAGTTGGGCTAGAGCAGGCAGCAAGGTaGCCAGAGAACAAGACACGTAGGGATGGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: EWAEVGLEQAAR*PENKTRRDGQR Trigger: TCTCTGGCCATCCCTACGTGTCTTGTTCTCTGGCCACCTTGCTGCCTGCTCTAGCCCAACTTCAGCCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | TGGACCATGGCAGGGCGGCCTATAGTTAAGGGGAGTTaGGTGGGTGGAGAAAGTAGCTGGTACCAAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: WTMAGRPIVKGS*VGGESSWYQRQ Trigger: CTGCCTTTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCCTGCCATGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | GAGGGCAGGGCAGGGACCAACCACCGAGGAGACTCCTaGATGAGATCGGGTCACATATCGTTTGCGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: EGRAGTNHRGDS*MRSGHISFAVF Trigger: AAAAACCGCAAACGATATGTGACCCGATCTCATTCAGGAGTCTCCTCGGTGGTTGGTCCCTGCCCTGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR CCA 72 bp | CTCGGAACCCTATCACTCACATCCCCAAGGCATGCCTaGCAGAGTGTAGCCTGTGAGGTAGATTCGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: LGTLSLTSPRHA*QSVACEVDSHS Trigger: ACTGTGCGAATCTACCTCACAGGCTACACTCTGCCAGGCATGCCTTGGGGATGTGAGTGATAGGGTTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR TCA 72 bp | ATAAAGAGTTATCGAGCTTCACAAGCAGTGACACGCTaGACATTGCATAACGGTGGCCCCGGTGGCCATTCA | + |
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Preference number: 3 (lower is better) Translates to: IKSYRASQAVTR*TLHNGGPGGHS Trigger: TGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGCGTGTCACTGCTTGTGAAGCTCGATAACTCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| 3UTR-3UTR CAA 90 bp | ATACAGGTAGTGCTTAGATCAGGAGTGTTTGTAGATGCTAAGGGACAGAGCTCTCGGGTCACATATCGTTaGCGGTTTTTAGTAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: IQVVLRSGVFVDAKGQSSRVTYR*RFLVVV Trigger: GACCACTACTAAAAACCGCAAACGATATGTGACCCG...AGAGCTCTGTCCCTTAGCATCTACAAACACTCCTGATCTAAGCACTACCTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | TGGGAGCTAGTCTCCCACAGATCCCCTGTACCCACCCGTGCCCCCAGACCGCACCGCCGATGCCCTGGTTaGGGTCCGCGCGCCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WELVSHRSPVPTRAPRPHRRCPG*GPRAAA Trigger: TGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCG...GTGCGGTCTGGGGGCACGGGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGCTAGTCTCCCACAGATCCCCTGTACCCACCCGTGCCCCCAGACCGCACGCGGCTGGGCGACTGTaGCTCGCCGATGCCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: WELVSHRSPVPTRAPRPHAAGRL*LADALV Trigger: AACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGC...GTGCGGTCTGGGGGCACGGGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGCTAGTCTCCCACAGATCCCCTGTACCCACCCGTGCCCCCAGACCGCACTCCGGCTCAGCTTGCTaGCCAACTCGTCCGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WELVSHRSPVPTRAPRPHSGSAC*PTRPWP Trigger: TGGCCACGGACGAGTTGGCCAGCAAGCTGAGCCGGA...GTGCGGTCTGGGGGCACGGGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CCA 90 bp | CACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTGAAATCAGCTTAGAGTGCGGCTCGCCGATGCCCTaGTTGAGGTCCGCGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HSGLHPAWLGPIEISLECGSPMP*LRSARR Trigger: GCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCC...GCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAAACTCGGTGTAGGGGTTaGAGACGCGGCGGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQTRCRG*RRGGWA Trigger: CGCCCAGCCGCCGCGTCTTCAACCCCTACACCGAGT...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | CACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTGAAATCAGCTTAGAGTGCAGCGGCTGGACACGTTaGTGGCCTGTACCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSGLHPAWLGPIEISLECSGWTR*WPVPWP Trigger: AGGCCAAGGTACAGGCCATCAACGTGTCCAGCCGCT...GCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAAGCCTCCGGCTCAGCTTaGTGGCCAACTCGTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQASGSA*WPTRPW Trigger: CCACGGACGAGTTGGCCAGCAAGCTGAGCCGGAGGC...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACCGCGCCGCAGCAGCTTaGCGCTCAGCTCGTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHRAAAA*RSARRP Trigger: CGGACGACGAGCTGAGCGCCAAGCTGCTGCGGCGCG...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAACCTTCGCCCTCCATCTaGAGCCTCCGGCTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQPSPSI*SLRLSL Trigger: CAAGCTGAGCCGGAGGCTGCAGATGGAGGGCGAAGG...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | TGCTGGACCATGGCAGGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAACTGCAACTCCCCTGCTaGTGCCTTGCGGAAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: CWTMAGRPIVKGSWVGGELQLPC*CLAEDQ Trigger: CTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAG...TTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCCTGCCATGGTCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | CATCACAGCCGCATGAACCGCAGGAGAGGGCAGGGCAGGGACCAACCACCGAGGCGGCATCATACTGCTTaGACATCTTCTCCATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HHSRMNRRRGQGRDQPPRRHHTA*TSSPCL Trigger: AAGACATGGAGAAGATGTTCAAGCAGTATGATGCCG...CCTCGGTGGTTGGTCCCTGCCCTGCCCTCTCCTGCGGTTCATGCGGCTGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAAAAGCCGCTGTCTTCCTaGAACTCCCCTGCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQKPLSS*NSPAAA Trigger: GGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTT...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCTCTCCACTTCCATCAGAGATGGGGCCTGATCTGAAAGGAAGCGTCCTGAAGGCCGCTTTCCGCTaGTTCACCTCCTCAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RVSPLPSEMGPDLKGSVLKAAFR*FTSSAC Trigger: GCAGGCTGAGGAGGTGAAGCAGCGGAAAGCGGCCTT...CAGGACGCTTCCTTTCAGATCAGGCCCCATCTCTGATGGAAGTGGAGAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAATCCTCGTCCACCTCCTaGATCATACTCTTGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQSSSTS*IILLRP Trigger: GGGCCTCAAGAGTATGATCCAGGAGGTGGACGAGGA...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAAGGAACTCCCGGAAGCTaGGTTTGCTGTCGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQGTPGS*VCCRNP Trigger: AGGATTTCGACAGCAAACTCAGCTTCCGGGAGTTCC...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | GGGCGGCCTATAGTTAAGGGGAGTTGGGTGGGTGGAGAAAGTAGCTGGTACCAACCTCTTGCTCAGCTTTaGTCTCTTCCTCAAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GRPIVKGSWVGGESSWYQPLAQL*SLPQSG Trigger: GCCGCTTTGAGGAAGAGATCAAAGCTGAGCAAGAGG...TTGGTACCAGCTACTTTCTCCACCCACCCAACTCCCCTTAACTATAGGCCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACCCCCTGCTGCTGCCTTaGGGAAGATCAGAAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHPLLLP*GRSEGT Trigger: AGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGG...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | ATACAGGTAGTGCTTAGATCAGGAGTGTTTGTAGATGCTAAGGGACAGAGCTCTAGGCGGGCCAGGACGTaGAAGCCGCTGTCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IQVVLRSGVFVDAKGQSSRRART*KPLSSC Trigger: GCAGGAAGACAGCGGCTTGCACGTCCTGGCCCGCCT...AGAGCTCTGTCCCTTAGCATCTACAAACACTCCTGATCTAAGCACTACCTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GGCCATTCACTTAGACTGGGTGACGTCACAGTTTCACAACACAGCAACGGACACTTCACCTCCTCAGCCTaGTTCTTCCTTTCCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GHSLRLGDVTVSQHSNGHFTSSA*FFLSSC Trigger: GCAAGAGGAAAGGAAGAAGCAGGCTGAGGAGGTGAA...GTGTCCGTTGCTGTGTTGTGAAACTGTGACGTCACCCAGTCTAAGTGAATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR TCA 90 bp | TCGGGTCACATATCGTTTGCGGTTTTTAGTAGTGGTCCGGGCACAGAGAGCAGGTCTTCTCCATGTCTTTaGTCTGCTTCCTGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SGHISFAVFSSGPGTESRSSPCL*SASWRT Trigger: AGTTCTCCAGGAAGCAGATCAAAGACATGGAGAAGA...CCTGCTCTCTGTGCCCGGACCACTACTAAAAACCGCAAACGATATGTGACCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR GCA 90 bp | GTCACATATCGTTTGCGGTTTTTAGTAGTGGTCCGGGCACAGAGAGCAGGACCTCTGCCGGCATCATACTaGTTGAACATCTTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: VTYRLRFLVVVRAQRAGPLPASY*LNIFSM Trigger: CATGGAGAAGATGTTCAAGCAGTATGATGCCGGCAG...AGGTCCTGCTCTCTGTGCCCGGACCACTACTAAAAACCGCAAACGATATGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CCA 90 bp | CGCAGCAGCTTGGCGCTCAGCTCGTCGTCCGCGCTGCCCAACGCCTaGGCAGTCTCGTCGGGAGCCTCGGCCGCCGCCGCCGCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RSSLALSSSSALPNA*AVSSGASAAAAAAA Trigger: GGCGGCGGCGGCGGCGGCGGCCGAGGCTCCCGACGAGACTGCCCAGGCGTTGGGCAGCGCGGACGACGAGCTGAGCGCCAAGCTGCTGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | GGTCCGCGCGCCGCAGCAGCTTGGCGCTCAGCTCGTCGTCCGCGCTaGCCAACGCCTGGGCAGTCTCGTCGGGAGCCTCGGCCGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: GPRAAAAWRSARRPR*PTPGQSRREPRPPP Trigger: CGGCGGCGGCCGAGGCTCCCGACGAGACTGCCCAGGCGTTGGGCAGCGCGGACGACGAGCTGAGCGCCAAGCTGCTGCGGCGCGCGGACC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CCA 90 bp | GGGTTGAAGACGCGGCGGCTGGGCGACTGTGGCTCGCCGATGCCCTaGTTGAGGTCCGCGCGCCGCAGCAGCTTGGCGCTCAGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLKTRRLGDCGSPMP*LRSARRSSLALSSS Trigger: CGACGAGCTGAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCCGCGTCTTCAACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | ACGGGTGACAAACCCAAGGAAGGAGAGTGTGAAAGGGGTGCCGGCCCCGAGTCCTCGCCGATGCCCTGGTaGAGGTCCGCGCGCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TGDKPKEGECERGAGPESSPMPW*RSARRS Trigger: GCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGA...GGACTCGGGGCCGGCACCCCTTTCACACTCTCCTTCCTTGGGTTTGTCACCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | TGGGAGCTAGTCTCCCACAGATCCCCTGTACCCACCCGTGCCCCCAGACCGCACAGCCTCCGGCTCAGCTaGCTGGCCAACTCGTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: WELVSHRSPVPTRAPRPHSLRLS*LANSSV Trigger: CACGGACGAGTTGGCCAGCAAGCTGAGCCGGAGGCT...GTGCGGTCTGGGGGCACGGGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | CAGGCGGGCCAGGACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTaGTGCTGCCTTGCGGAAGATCAGAAGGAACTCCCGGAAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QAGQDVQAAVFLQLP*CCLAEDQKELPEAE Trigger: CTCAGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCTGGCCCGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | TCGATCTCGGACAGGCGGGCCAGGACGTGCAAGCCGCTGTCTTCCTaGAACTCCCCTGCTGCTGCCTTGCGGAAGATCAGAAGGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SISDRRARTCKPLSS*NSPAAALRKIRRNS Trigger: GGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCTGGCCCGCCTGTCCGAGATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | ACGGGTGACAAACCCAAGGAAGGAGAGTGTGAAAGGGGTGCCGGCCCCGAGTCCAAGCGGCTGGACACGTaGATGGCCTGTACCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGDKPKEGECERGAGPESKRLDT*MACTLA Trigger: GGCCAAGGTACAGGCCATCAACGTGTCCAGCCGCTT...GGACTCGGGGCCGGCACCCCTTTCACACTCTCCTTCCTTGGGTTTGTCACCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | GCGGGCCAGGACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTGCTaGTGCCTTGCGGAAGATCAGAAGGAACTCCCGGAAGCTGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: AGQDVQAAVFLQLPC*CLAEDQKELPEAEF Trigger: AAACTCAGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCTGGCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | GGCCAGGACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTGCTGCTaGCTTGCGGAAGATCAGAAGGAACTCCCGGAAGCTGAGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GQDVQAAVFLQLPCC*LAEDQKELPEAEFA Trigger: AGCAAACTCAGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | TGGGAGCTAGTCTCCCACAGATCCCCTGTACCCACCCGTGCCCCCAGACCGCACCCGGCATCATACTGCTaGAACATCTTCTCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WELVSHRSPVPTRAPRPHPASYC*NIFSMS Trigger: AGACATGGAGAAGATGTTCAAGCAGTATGATGCCGG...GTGCGGTCTGGGGGCACGGGTGGGTACAGGGGATCTGTGGGAGACTAGCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | TCACTCACATCCCCAAGGCATGCCTGGCAGAGTGTAGCCTGTGAGGTAGATTCGTCCCCTGCTGCTGCCTaGCGGAAGATCAGAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLTSPRHAWQSVACEVDSSPAAA*RKIRRN Trigger: GTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGA...CGAATCTACCTCACAGGCTACACTCTGCCAGGCATGCCTTGGGGATGTGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 90 bp | GCTTTCCGCTGCTTCACCTCCTCAGCCTGCTTCTTCCTTTCCTCTTaGTCAGCTTTGATCTCTTCCTCAAAGCGGCTGGACACGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AFRCFTSSACFFLSS*SALISSSKRLDTLM Trigger: CATCAACGTGTCCAGCCGCTTTGAGGAAGAGATCAAAGCTGAGCAAGAGGAAAGGAAGAAGCAGGCTGAGGAGGTGAAGCAGCGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | CACAGTGGCCTTCACCCTGCCTGGCTGGGCCCCATTGAAATCAGCTTAGAGTGCATCTTCTCCATGTCTTaGATCTGCTTCCTGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSGLHPAWLGPIEISLECIFSMS*ICFLEN Trigger: GTTCTCCAGGAAGCAGATCAAAGACATGGAGAAGAT...GCACTCTAAGCTGATTTCAATGGGGCCCAGCCAGGCAGGGTGAAGGCCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS-3UTR CAA 90 bp | TCGGGTCACATATCGTTTGCGGTTTTTAGTAGTGGTCCGGGCACAGAGAGCAGGTCCTGGATCATACTCTaGAGGCCCAAGTGTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGHISFAVFSSGPGTESRSWIIL*RPKCVW Trigger: CCAGACACACTTGGGCCTCAAGAGTATGATCCAGGA...CCTGCTCTCTGTGCCCGGACCACTACTAAAAACCGCAAACGATATGTGACCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CCA 72 bp | ACGCGGCGGCTGGGCGACTGTGGCTCGCCGATGCCCTaGTTGAGGTCCGCGCGCCGCAGCAGCTTGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRRLGDCGSPMP*LRSARRSSLAL Trigger: GAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCCGCGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 72 bp | CGGCGGCTGGGCGACTGTGGCTCGCCGATGCCCTGGTaGAGGTCCGCGCGCCGCAGCAGCTTGGCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRLGDCGSPMPW*RSARRSSLALS Trigger: GCTGAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS TCA 72 bp | GGCGGCTGGGCGACTGTGGCTCGCCGATGCCCTGGTTaGGGTCCGCGCGCCGCAGCAGCTTGGCGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGWATVARRCPG*GPRAAAAWRSA Trigger: AGCTGAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 72 bp | GCCGCAGCAGCTTGGCGCTCAGCTCGTCGTCCGCGCTaGCCAACGCCTGGGCAGTCTCGTCGGGAGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAWRSARRPR*PTPGQSRREPR Trigger: CCGAGGCTCCCGACGAGACTGCCCAGGCGTTGGGCAGCGCGGACGACGAGCTGAGCGCCAAGCTGCTGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 90 bp | TGTGGCTCGCCGATGCCCTGGTTGAGGTCCGCGCGCCGCAGCAGCTaGGCGCTCAGCTCGTCGTCCGCGCTGCCCAACGCCTGGGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CGSPMPWLRSARRSS*ALSSSSALPNAWAV Trigger: GACTGCCCAGGCGTTGGGCAGCGCGGACGACGAGCTGAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CCA 72 bp | GGTGTAGGGGTTGAAGACGCGGCGGCTGGGCGACTGTaGCTCGCCGATGCCCTGGTTGAGGTCCGCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVGVEDAAAGRL*LADALVEVRAP Trigger: CGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCCGCGTCTTCAACCCCTACACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 90 bp | TTGAAGACGCGGCGGCTGGGCGACTGTGGCTCGCCGATGCCCTGGTaGAGGTCCGCGCGCCGCAGCAGCTTGGCGCTCAGCTCGTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LKTRRLGDCGSPMPW*RSARRSSLALSSSS Trigger: GGACGACGAGCTGAGCGCCAAGCTGCTGCGGCGCGCGGACCTCAACCAGGGCATCGGCGAGCCACAGTCGCCCAGCCGCCGCGTCTTCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 72 bp | CAGGACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTaGTGCTGCCTTGCGGAAGATCAGAAGGAACTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QDVQAAVFLQLP*CCLAEDQKELP Trigger: CGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 72 bp | GTGCAAGCCGCTGTCTTCCTGCAACTCCCCTGCTGCTaGCTTGCGGAAGATCAGAAGGAACTCCCGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQAAVFLQLPCC*LAEDQKELPEA Trigger: AGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS GCA 72 bp | GACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTGCTaGTGCCTTGCGGAAGATCAGAAGGAACTCCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVQAAVFLQLPC*CLAEDQKELPE Trigger: TTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 90 bp | AGGACGTGCAAGCCGCTGTCTTCCTGCAACTCCCCTGCTGCTGCCTaGCGGAAGATCAGAAGGAACTCCCGGAAGCTGAGTTTGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RTCKPLSSCNSPAAA*RKIRRNSRKLSLLS Trigger: CGACAGCAAACTCAGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTTGCACGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 72 bp | AAGCCGCTGTCTTCCTGCAACTCCCCTGCTGCTGCCTaGCGGAAGATCAGAAGGAACTCCCGGAAGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KPLSSCNSPAAA*RKIRRNSRKLS Trigger: ACTCAGCTTCCGGGAGTTCCTTCTGATCTTCCGCAAGGCAGCAGCAGGGGAGTTGCAGGAAGACAGCGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CCA 72 bp | AAGCTGAGTTTGCTGTCGAAATCCTCGTCCACCTCCTaGATCATACTCTTGAGGCCCAAGTGTGTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLSLLSKSSSTS*IILLRPKCVWG Trigger: CCCCCAGACACACTTGGGCCTCAAGAGTATGATCCAGGAGGTGGACGAGGATTTCGACAGCAAACTCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 72 bp | ACGTTGATGGCCTGTACCTTGGCCTCGAAGAAGTTCTaGGCACCCTTAACGCCCTCTGTGGAGACATCGATC | + |
|
Preference number: 6 (lower is better) Translates to: TLMACTLASKKF*APLTPSVETSI Trigger: GATCGATGTCTCCACAGAGGGCGTTAAGGGTGCCAAGAACTTCTTCGAGGCCAAGGTACAGGCCATCAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 90 bp | CGCTTTCCGCTGCTTCACCTCCTCAGCCTGCTTCTTCCTTTCCTCTaGCTCAGCTTTGATCTCTTCCTCAAAGCGGCTGGACACGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RFPLLHLLSLLLPFL*LSFDLFLKAAGHVD Trigger: ATCAACGTGTCCAGCCGCTTTGAGGAAGAGATCAAAGCTGAGCAAGAGGAAAGGAAGAAGCAGGCTGAGGAGGTGAAGCAGCGGAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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| CDS CAA 72 bp | CCGGCATCATACTGCTTGAACATCTTCTCCATGTCTTaGATCTGCTTCCTGGAGAACTCCTTGAACTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PASYCLNIFSMS*ICFLENSLNSV Trigger: CACCGAGTTCAAGGAGTTCTCCAGGAAGCAGATCAAAGACATGGAGAAGATGTTCAAGCAGTATGATGCCGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036854.4 |
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