RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EEF1G (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071644

Ensembl transcript IDs: ENSMUST00000052248.8

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGCAGGGCAATAAAGACAAAACTGAGGCCAGGCCTCTACTTCTaGTCTTCTGAAAACTTCTGCCCTGCCACAAGGATGTCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: GSRAIKTKLRPGLYF*SSENFCPATRMSQA
Trigger: TGCCTGAGACATCCTTGTGGCAGGGCAGAAGTTTTCAGAAGAGCAGAAGTAGAGGCCTGGCCTCAGTTTTGTCTTTATTGCCCTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR TCA 90 bp ACTTCTGCCCTGCCACAAGGATGTCTCAGGCATCGGCAAAAACTTTaGAGAAGCCACCAATCACAAAGGAGGCAGGACAGGAAAAAGTTC +
Preference number: 1 (lower is better)
Translates to: TSALPQGCLRHRQKL*RSHQSQRRQDRKKF
Trigger: GAACTTTTTCCTGTCCTGCCTCCTTTGTGATTGGTGGCTTCTTCAAAGTTTTTGCCGATGCCTGAGACATCCTTGTGGCAGGGCAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR-3UTR TCA 90 bp GTGAGCTACCCCTTAGCTCAGCAGACACTTTCTTCAATGGTTACAGTCTGGGAGCTACTTCTGCTCTTCTaGAAACTTCTGCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: VSYPLAQQTLSSMVTVWELLLLF*KLLPCH
Trigger: GTGGCAGGGCAGAAGTTTTCAGAAGAGCAGAAGTAG...CTCCCAGACTGTAACCATTGAAGAAAGTGTCTGCTGAGCTAAGGGGTAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR-3UTR GCA 90 bp GTGAGCTACCCCTTAGCTCAGCAGACACTTTCTTCAATGGTTACAGTCTGGGAGCCAGGCCTCTACTTCTaGTCTTCTGAAAACTTCTGC +
Preference number: 2 (lower is better)
Translates to: VSYPLAQQTLSSMVTVWEPGLYF*SSENFC
Trigger: GCAGAAGTTTTCAGAAGAGCAGAAGTAGAGGCCTGG...CTCCCAGACTGTAACCATTGAAGAAAGTGTCTGCTGAGCTAAGGGGTAGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR-3UTR TCA 90 bp CAGTCTGTTTCTCATCTTCCCCAGCTAGAACAGCATCATTGTAGGAAGCAGGGCCATCGGCAAAAACTTTaGAGAAGCCACCAATCACAA +
Preference number: 2 (lower is better)
Translates to: QSVSHLPQLEQHHCRKQGHRQKL*RSHQSQ
Trigger: TTGTGATTGGTGGCTTCTTCAAAGTTTTTGCCGATG...GCCCTGCTTCCTACAATGATGCTGTTCTAGCTGGGGAAGATGAGAAACAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR CAA 90 bp ACTTTCTTCAATGGTTACAGTCTGGGAGACACAGCTTCTAAGAATTaGGTAATAATTAAGCCCTATGTCACCACCCAGTCTGTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: TFFNGYSLGDTASKN*VIIKPYVTTQSVSH
Trigger: ATGAGAAACAGACTGGGTGGTGACATAGGGCTTAATTATTACCAAATTCTTAGAAGCTGTGTCTCCCAGACTGTAACCATTGAAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR TCA 72 bp GACAAAACTGAGGCCAGGCCTCTACTTCTGCTCTTCTaGAAACTTCTGCCCTGCCACAAGGATGTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: DKTEARPLLLLF*KLLPCHKDVSG
Trigger: GCCTGAGACATCCTTGTGGCAGGGCAGAAGTTTTCAGAAGAGCAGAAGTAGAGGCCTGGCCTCAGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR GCA 72 bp AGGCCAGGCCTCTACTTCTGCTCTTCTGAAAACTTCTaGCCTGCCACAAGGATGTCTCAGGCATCGGCAAAA +
Preference number: 3 (lower is better)
Translates to: RPGLYFCSSENF*PATRMSQASAK
Trigger: TTTTGCCGATGCCTGAGACATCCTTGTGGCAGGGCAGAAGTTTTCAGAAGAGCAGAAGTAGAGGCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR GCA 72 bp GCAATAAAGACAAAACTGAGGCCAGGCCTCTACTTCTaGTCTTCTGAAAACTTCTGCCCTGCCACAAGGATG +
Preference number: 3 (lower is better)
Translates to: AIKTKLRPGLYF*SSENFCPATRM
Trigger: CATCCTTGTGGCAGGGCAGAAGTTTTCAGAAGAGCAGAAGTAGAGGCCTGGCCTCAGTTTTGTCTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR-3UTR CAA 90 bp CACTGTGAGCTACCCCTTAGCTCAGCAGACACTTTCTTCAATGGTTACAGTCTGGCATCGGCAAAAACTTaGAAGAAGCCACCAATCACA +
Preference number: 3 (lower is better)
Translates to: HCELPLSSADTFFNGYSLASAKT*KKPPIT
Trigger: TGTGATTGGTGGCTTCTTCAAAGTTTTTGCCGATGC...CAGACTGTAACCATTGAAGAAAGTGTCTGCTGAGCTAAGGGGTAGCTCACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR CAA 72 bp CCTGCCACAAGGATGTCTCAGGCATCGGCAAAAACTTaGAAGAAGCCACCAATCACAAAGGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PATRMSQASAKT*KKPPITKEAGQ
Trigger: CTGTCCTGCCTCCTTTGTGATTGGTGGCTTCTTCAAAGTTTTTGCCGATGCCTGAGACATCCTTGTGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
CDS-3UTR TCA 90 bp ACCCAGTCTGTTTCTCATCTTCCCCAGCTAGAACAGCATCATTGTAGGAAGCAGCTGTTTCTCCTCTCGTaGACCCTTTTCTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TQSVSHLPQLEQHHCRKQLFLLS*TLFFPW
Trigger: CCAAGGAAAGAAAAGGGTTCACGAGAGGAGAAACAG...CTGCTTCCTACAATGATGCTGTTCTAGCTGGGGAAGATGAGAAACAGACTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
3UTR CAA 72 bp AATGGTTACAGTCTGGGAGACACAGCTTCTAAGAATTaGGTAATAATTAAGCCCTATGTCACCACCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NGYSLGDTASKN*VIIKPYVTTQS
Trigger: AGACTGGGTGGTGACATAGGGCTTAATTATTACCAAATTCTTAGAAGCTGTGTCTCCCAGACTGTAACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
CDS-3UTR CAA 90 bp ATTAAGCCCTATGTCACCACCCAGTCTGTTTCTCATCTTCCCCAGCTAGAACAGGTAAGGAACCACCGGTaGGTATTGGGGAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: IKPYVTTQSVSHLPQLEQVRNHR*VLGKAW
Trigger: CCAGGCCTTCCCCAATACCAACCGGTGGTTCCTTAC...CTGTTCTAGCTGGGGAAGATGAGAAACAGACTGGGTGGTGACATAGGGCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8
CDS-3UTR CAA 90 bp ACAAGGATGTCTCAGGCATCGGCAAAAACTTTGAAGAAGCCACCAATCACAAAGGAGAGGGTGTCCTCATaGGAGTACTTACGCTTAAAC +
Preference number: 5 (lower is better)
Translates to: TRMSQASAKTLKKPPITKERVSS*EYLRLN
Trigger: GTTTAAGCGTAAGTACTCCAATGAGGACACCCTCTC...CTTTGTGATTGGTGGCTTCTTCAAAGTTTTTGCCGATGCCTGAGACATCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052248.8