Pregenerated sensors for ECHDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028601Ensembl transcript IDs: ENSMUST00000052999.13, ENSMUST00000106691.3, ENSMUST00000116307.8, ENSMUST00000116309.10, ENSMUST00000125647.8, ENSMUST00000126900.8, ENSMUST00000130942.8, ENSMUST00000135718.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCACAGGGAAGGCTGCGATCTCACTCATCAGGCCTCGGAGCCGCTaGACAAAGGTCCCCACCTCCACATCACTCATCTGCTCCCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GTGKAAISLIRPRSR*TKVPTSTSLICSRS Trigger: GGAGCGGGAGCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCAGCCTTCCCTGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR GCA 90 bp | CCTCGGAGCCGCTGGACAAAGGTCCCCACCTCCACATCACTCATCTaGTCCCGCTCCTTCAGGTCTGCACCTTGTGAGCATGTTGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PRSRWTKVPTSTSLI*SRSFRSAPCEHVGT Trigger: AGTCCCAACATGCTCACAAGGTGCAGACCTGAAGGAGCGGGAGCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR TCA 90 bp | GTTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTaGAGGCTGCCATTCCTTCCAGCCTGTCCTGGGTTGGGATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VSWVTCPQIWELVSP*RLPFLPACPGLGCS Trigger: AGAACATCCCAACCCAGGACAGGCTGGAAGGAATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR CCA 90 bp | AATCTCACTCTCTCCCTTCCCTCACTAAGCTGTGTAAACCAAACTTaGCGAGGAACTTCACCTGCCTGTGTCTTCAAGTGCGTTCATATT | + |
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Preference number: 1 (lower is better) Translates to: NLTLSLPSLSCVNQT*RGTSPACVFKCVHI Trigger: AATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCCAAGTTTGGTTTACACAGCTTAGTGAGGGAAGGGAGAGAGTGAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTCCTCTGAGTCCCTCCTaGTCCTGGGAGAAGTCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPPLSPS*SWEKSS Trigger: CGAGGACTTCTCCCAGGAGCAGGAGGGACTCAGAGG...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTCCTTCCAGCCTGTCCTaGGTTGGGATGTTCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPPSSLS*VGMFWA Trigger: TGCCCAGAACATCCCAACCCAGGACAGGCTGGAAGG...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTCAGCCTGTCCTGGGTTaGGATGTTCTGGGCATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPQPVLG*DVLGIA Trigger: TGCTATGCCCAGAACATCCCAACCCAGGACAGGCTG...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCCAACTCACGGGCCTGTGCCCCGTTCAGTCGCCGGCCTGTGAAGATGAGGAGCAGTATGGAAGGTaGCAGTGCACTGCATGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QAQLTGLCPVQSPACEDEEQYGR*QCTAWS Trigger: TGACCATGCAGTGCACTGCCACCTTCCATACTGCTC...CTCATCTTCACAGGCCGGCGACTGAACGGGGCACAGGCCCGTGAGTTGGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCGATCTCACTCATCAGGCCTCGGAGCCGCTGGACAAAGGTCCCCACCTCGCGAGGAACTTCACCTaGCTGTGTCTTCAAGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: GCDLTHQASEPLDKGPHLARNFT*LCLQVR Trigger: ACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGC...GAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCGATCTCCTGTGCCAGTaGCAGGGCCCGGTGGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LAGSLAHKFGSSFLPEGCDLLCQ*QGPVVG Trigger: GCCTACCACCGGGCCCTGGCACTGGCACAGGAGATC...GCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR CAA 90 bp | ATCCCTGATGCAATGTCCACCTCCATTCCTCTGTCGATGGCAACTTaGCCCAGGCGCACAGCAATGGGAGCCTGGGGCAGGATCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IPDAMSTSIPLSMAT*PRRTAMGAWGRISC Trigger: ACAGGAGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGGAGGTGGACATTGCATCAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCCAGGCGCACAGCAATaGGAGCCTGGGGCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: LAGSLAHKFGSSFLPEGCPGAQQ*EPGAGS Trigger: AGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGG...GCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCCCAGGCGCACAGCAATaGGAGCCTGGGGCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VLKVSWVTCPQIWELVSPPGAQQ*EPGAGS Trigger: AGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGG...GGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTCCTTCCAGCCTGTCCTaGGTTGGGATGTTCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LGHLPTNLGARFSLKAAIPSSLS*VGMFWA Trigger: TGCCCAGAACATCCCAACCCAGGACAGGCTGGAAGG...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGCCTGTCCTGGGTTGGGATGTTCTGGGCATAGCACATCTGTTCTATGGGAGCTCGTTTCTCCCTaGAGGCTGCCATTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPACPGLGCSGHSTSVLWELVSP*RLPFLP Trigger: TGGAAGGAATGGCAGCCTTCAGGGAGAAACGAGCTC...CCATAGAACAGATGTGCTATGCCCAGAACATCCCAACCCAGGACAGGCTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCCCTCTGAGTCCCTCCTaGTCCTGGGAGAAGTCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: VLKVSWVTCPQIWELVSPPLSPS*SWEKSS Trigger: CGAGGACTTCTCCCAGGAGCAGGAGGGACTCAGAGG...GGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATGGTGTGTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGGGGCAGGATCTCCTGTaGCAGTGCCAGGGCCCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TLWCVLKVSWVTCPQIWEGQDLL*QCQGPV Trigger: CACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCC...CTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCACACACCATAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTCAGCCTGTCCTGGGTTaGGATGTTCTGGGCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: LGHLPTNLGARFSLKAAIQPVLG*DVLGIA Trigger: TGCTATGCCCAGAACATCCCAACCCAGGACAGGCTG...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAGCCTGTCCTGGGTTGGGATGTTCTGGGCATAGCACATCTGTTCTATGGGTCCAGAATTCCCCTTaGGTTACAGAGAGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPACPGLGCSGHSTSVLWVQNSP*VTESWR Trigger: CCTCCAGCTCTCTGTAACGCAAGGGGAATTCTGGAC...CCATAGAACAGATGTGCTATGCCCAGAACATCCCAACCCAGGACAGGCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTGAGCAGTATGGAAGGTaGCAGTGCACTGCATGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGHLPTNLGARFSLKAAIEQYGR*QCTAWS Trigger: TGACCATGCAGTGCACTGCCACCTTCCATACTGCTC...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGTGTCTCCATTTCCTCCATAAAGGGTCAGAAGGAAGCCAGGTAGAACAGCCATGGCTGCAATGGTaGGCACAGGGAAGGCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: TQCLHFLHKGSEGSQVEQPWLQW*AQGRLR Trigger: TCGCAGCCTTCCCTGTGCCCACCATTGCAGCCATGG...CTGTTCTACCTGGCTTCCTTCTGACCCTTTATGGAGGAAATGGAGACACTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATGGTGTGTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGCCAGGCGCACAGCAATaGGAGCCTGGGGCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: TLWCVLKVSWVTCPQIWEPGAQQ*EPGAGS Trigger: AGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGG...CTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCACACACCATAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTCTGCACCTTGTGAGCATGTTGGGACTCAGTGTCTCCATTTCCTCCATAAGGCAAACCCATCCATaGCTGCAATGGTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SGLHLVSMLGLSVSISSIRQTHP*LQWWAQ Trigger: CTGTGCCCACCATTGCAGCCATGGATGGGTTTGCCT...TATGGAGGAAATGGAGACACTGAGTCCCAACATGCTCACAAGGTGCAGACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTAAGACCCGAAGTTTTTaGATGCAGAGAGTCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LGHLPTNLGARFSLKAAIKTRSF*MQRVQS Trigger: TGACTGGACTCTCTGCATTCAAAAACTTCGGGTCTT...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCAAGACCCGAAGTTTTTaGATGCAGAGAGTCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LAGSLAHKFGSSFLPEGCKTRSF*MQRVQS Trigger: TGACTGGACTCTCTGCATTCAAAAACTTCGGGTCTT...GCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTGGGCACAGGGAAGGCTaGGATCTCACTCATCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRAGHREG*DLTHQA Trigger: GGCCTGATGAGTGAGATCGCAGCCTTCCCTGTGCCC...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTAGCACATCTGTTCTATaGCCATCCCTGATGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: LGHLPTNLGARFSLKAAISTSVL*PSLMQC Trigger: ACATTGCATCAGGGATGGCCATAGAACAGATGTGCT...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTAGTCCCTCCTGCTCCTaGGAGAAGTCCTCGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRASPSCS*EKSSSG Trigger: ACCACTCGAGGACTTCTCCCAGGAGCAGGAGGGACT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTAAACCCATCCATGGCTaGAATGGTGGGCACAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRAKPIHG*NGGHRE Trigger: TTCCCTGTGCCCACCATTGCAGCCATGGATGGGTTT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTGAGCAGTATGGAAGGTaGCAGTGCACTGCATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRAEQYGR*QCTAWS Trigger: TGACCATGCAGTGCACTGCCACCTTCCATACTGCTC...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTAGAGCAGTATGGAAGGTaGCAGTGCACTGCATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SERLIERLNSLSRIPLALEQYGR*QCTAWS Trigger: TGACCATGCAGTGCACTGCCACCTTCCATACTGCTC...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTAAGACCCGAAGTTTTTaGATGCAGAGAGTCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRAKTRSF*MQRVQS Trigger: TGACTGGACTCTCTGCATTCAAAAACTTCGGGTCTT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTGGTGATCAGAGCCAATaGCAAAGACCCGAAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: LIERLNSLSRIPLALQRAGDQSQ*QRPEVF Trigger: AAAAACTTCGGGTCTTTGTCATTGGCTCTGATCACC...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTAAAGACCCGAAGTTTTTaGATGCAGAGAGTCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SERLIERLNSLSRIPLALKTRSF*MQRVQS Trigger: TGACTGGACTCTCTGCATTCAAAAACTTCGGGTCTT...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
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| 3UTR GCA 72 bp | CCCATCCATGGCTGCAATGGTGGGCACAGGGAAGGCTaGGATCTCACTCATCAGGCCTCGGAGCCGCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: PIHGCNGGHREG*DLTHQASEPLD Trigger: GTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCAGCCTTCCCTGTGCCCACCATTGCAGCCATGGATGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTCACTTGCCCACAAATTaGGGAGCTCGTTTCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPHLPTN*GARFSL Trigger: CAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTG...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR CCA 72 bp | AGCCCCCGCCTAAGGCAAACCCATCCATGGCTGCAATaGTGGGCACAGGGAAGGCTGCGATCTCACTCATCA | + |
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Preference number: 3 (lower is better) Translates to: SPRLRQTHPWLQ*WAQGRLRSHSS Trigger: TGATGAGTGAGATCGCAGCCTTCCCTGTGCCCACCATTGCAGCCATGGATGGGTTTGCCTTAGGCGGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
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| 3UTR CCA 72 bp | AAGGCTGCGATCTCACTCATCAGGCCTCGGAGCCGCTaGACAAAGGTCCCCACCTCCACATCACTCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: KAAISLIRPRSR*TKVPTSTSLIC Trigger: GCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR GCA 72 bp | GCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTaGCATTCCTTCCAGCCTGTCCTGGGTTGGGATGTT | + |
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Preference number: 3 (lower is better) Translates to: AHKFGSSFLPEG*HSFQPVLGWDV Trigger: AACATCCCAACCCAGGACAGGCTGGAAGGAATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCTGTGTAAACCAAACTaGGCGAGGAACTTCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: LAGSLAHKFGSSFLPEGCLCKPN*ARNFTC Trigger: GCAGGTGAAGTTCCTCGCCAAGTTTGGTTTACACAG...GCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR CCA 72 bp | CTCTCCCTTCCCTCACTAAGCTGTGTAAACCAAACTTaGCGAGGAACTTCACCTGCCTGTGTCTTCAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LSLPSLSCVNQT*RGTSPACVFKC Trigger: GCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCCAAGTTTGGTTTACACAGCTTAGTGAGGGAAGGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| 3UTR TCA 72 bp | AGTCCTCATTGCTCTATCCATGGTGATCAGAGCCAATaGCAAAGACCCGAAGTTTTTGAATGCAGAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: SPHCSIHGDQSQ*QRPEVFECRES Trigger: GGACTCTCTGCATTCAAAAACTTCGGGTCTTTGTCATTGGCTCTGATCACCATGGATAGAGCAATGAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000125647.8 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTCCATGGCTGCAATGGTaGGCACAGGGAAGGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPPWLQW*AQGRLR Trigger: TCGCAGCCTTCCCTGTGCCCACCATTGCAGCCATGG...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126900.8 |
||
| CDS-3UTR TCA 90 bp | TGCGATCTCACTCATCAGGCCTCGGAGCCGCTGGACAAAGGTCCCCACCTCCACCTGAAGAGGAGAGGGTaGCTGGGCACCCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CDLTHQASEPLDKGPHLHLKRRG*LGTHLH Trigger: GTGCAGGTGGGTGCCCAGTCACCCTCTCCTCTTCAG...GTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAACTCACGGGCCTGTGCCCCGTTCAGTCGCCGGCCTGTGAAGATGAGCAGGCATTCCAGTCCCTaGAGAGGAGAGGGTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPNSRACAPFSRRPVKMSRHSSP*RGEGDW Trigger: CCAGTCACCCTCTCCTCTTCAGGGACTGGAATGCCT...GCTCATCTTCACAGGCCGGCGACTGAACGGGGCACAGGCCCGTGAGTTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGATCTCCTGTGCCAGTGCCAGGGCCCGGTGGTAGGCAGCGTTACCCTAAACCCATCCATGGCTaGAATGGTGGGCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAGSPVPVPGPGGRQRYPKPIHG*NGGHRE Trigger: TTCCCTGTGCCCACCATTGCAGCCATGGATGGGTTT...AGGGTAACGCTGCCTACCACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126900.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAACTCACGGGCCTGTGCCCCGTTCAGTCGCCGGCCTGTGAAGATGAGCGTCAGAGCCTGCACTTaGATTTCGGGTGTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPNSRACAPFSRRPVKMSVRACT*ISGVLV Trigger: GACCAGGACACCCGAAATCCAAGTGCAGGCTCTGAC...GCTCATCTTCACAGGCCGGCGACTGAACGGGGCACAGGCCCGTGAGTTGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAACTCACGGGCCTGTGCCCCGTTCAGTCGCCGGCCTGTGAAGATGAGCAGGCAAACCCATCCATaGCTGCAATGGTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPNSRACAPFSRRPVKMSRQTHP*LQWWAQ Trigger: CTGTGCCCACCATTGCAGCCATGGATGGGTTTGCCT...GCTCATCTTCACAGGCCGGCGACTGAACGGGGCACAGGCCCGTGAGTTGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126900.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAACTCACGGGCCTGTGCCCCGTTCAGTCGCCGGCCTGTGAAGATGAGCTTCCAGCAGCTTGGTTaGGACCTGTCAGAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPNSRACAPFSRRPVKMSFQQLG*DLSEPA Trigger: TGCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGAA...GCTCATCTTCACAGGCCGGCGACTGAACGGGGCACAGGCCCGTGAGTTGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| 3UTR CAA 72 bp | GCAATGTCCACCTCCATTCCTCTGTCGATGGCAACTTaGCCCAGGCGCACAGCAATGGGAGCCTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMSTSIPLSMAT*PRRTAMGAWGR Trigger: CCTGCCCCAGGCTCCCATTGCTGTGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGGAGGTGGACATTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125647.8 ENSMUST00000126900.8 ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTCGGAGCCGCTGGACAAAGGTCCCCACCTCCACATCACTCATCTGCTGACTGGGCACCCACCTaGACAGAACACTCCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLGAAGQRSPPPHHSSADWAPT*TEHSLH Trigger: GTGAAGGGAGTGTTCTGTGCAGGTGGGTGCCCAGTC...AGCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGCCTGTCCTGGGTTGGGATGTTCTGGGCATAGCACATCTGTTCTATGGTGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPACPGLGCSGHSTSVLWWSSRS*ARASSS Trigger: GCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCA...CCATAGAACAGATGTGCTATGCCCAGAACATCCCAACCCAGGACAGGCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCCATTTGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGHLPTNLGARFSLKAAIWSSRS*ARASSS Trigger: GCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCA...AATGGCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGCCTGTCCTGGGTTGGGATGTTCTGGGCATAGCACATCTGTTCTATGGCCGCTCCTTCAGGTCTaGACCTGCACAGAACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPACPGLGCSGHSTSVLWPLLQV*TCTEHS Trigger: GGAGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...CCATAGAACAGATGTGCTATGCCCAGAACATCCCAACCCAGGACAGGCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCTGAAGGCTGCGAGCTTCCAGCAGCTTaGTTGGGACCTGTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSLAHKFGSSFLPEGCELPAA*LGPVRA Trigger: GGCTCTGACAGGTCCCAACCAAGCTGCTGGAAGCTC...GCAGCCTTCAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTGGGCAGGATCTCCTGTaGCAGTGCCAGGGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAGQDLL*QCQGPV Trigger: CACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCC...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTAGCCCCATGACAGCCGAAGAAGCTGCTATTCGGAGGTCACAGGCCAGGTCATCAGAATCTCAGTaGTTCCTTGGTTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SISPMTAEEAAIRRSQARSSESQ*FLGWDL Trigger: CAGGTCCCAACCAAGGAATCACTGAGATTCTGATGA...CCTGGCCTGTGACCTCCGAATAGCAGCTTCTTCGGCTGTCATGGGGCTAATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGCTCGTTTCTCCCGGACCTGTCAGAGCCTaGACTTGGATTTCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKVSWVTCPQIWELVSPGPVRA*TWISGV Trigger: GACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCC...GGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | GGCGAGGAACTTCACCTGCCTGTGTCTTCAAGTGCGTTCATATTGTCAAATGGGGGACCTGTCAGAGCCTaGACTTGGATTTCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GEELHLPVSSSAFILSNGGPVRA*TWISGV Trigger: GACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCC...CCCATTTGACAATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTGATCTCCTGTGCCAGTaGCAGGGCCCGGTGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRADLLCQ*QGPVVG Trigger: GCCTACCACCGGGCCCTGGCACTGGCACAGGAGATC...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGGGCAGGATCTCCTGTaGCAGTGCCAGGGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAGQDLL*QCQGPV Trigger: CACCGGGCCCTGGCACTGGCACAGGAGATCCTGCCC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGATCTCCTGTGCCAGTaGCAGGGCCCGGTGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLADLLCQ*QGPVVG Trigger: GCCTACCACCGGGCCCTGGCACTGGCACAGGAGATC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTCCAGGCGCACAGCAATaGGAGCCTGGGGCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAPGAQQ*EPGAGS Trigger: AGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGG...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTCCTCTGAGTCCCTCCTaGTCCTGGGAGAAGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAPLSPS*SWEKSS Trigger: CGAGGACTTCTCCCAGGAGCAGGAGGGACTCAGAGG...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTTGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAWSSRS*ARASSS Trigger: GCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCA...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACCAGGCGCACAGCAATaGGAGCCTGGGGCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALPGAQQ*EPGAGS Trigger: AGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGG...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTCCGCTCCTTCAGGTCTaGACCTGCACAGAACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAPLLQV*TCTEHS Trigger: GGAGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGGGCACAGGGAAGGCTaGGATCTCACTCATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAGHREG*DLTHQA Trigger: GGCCTGATGAGTGAGATCGCAGCCTTCCCTGTGCCC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGACCTCTGAGTCCCTCCTaGTCCTGGGAGAAGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRPLSPS*SWEKSS Trigger: CGAGGACTTCTCCCAGGAGCAGGAGGGACTCAGAGG...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | GCGAGGAACTTCACCTGCCTGTGTCTTCAAGTGCGTTCATATTGTCAAATGGGAATCTCAGTGATTCCTTaGTTGGGACCTGTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARNFTCLCLQVRSYCQMGISVIP*LGPVRA Trigger: GGCTCTGACAGGTCCCAACCAAGGAATCACTGAGAT...TCCCATTTGACAATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGATGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRWSSRS*ARASSS Trigger: GCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCA...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGACCATGGCTGCAATGGTaGGCACAGGGAAGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRPWLQW*AQGRLR Trigger: TCGCAGCCTTCCCTGTGCCCACCATTGCAGCCATGG...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACCGCTCCTTCAGGTCTaGACCTGCACAGAACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALPLLQV*TCTEHS Trigger: GGAGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTAGGCAAACCCATCCATaGCTGCAATGGTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRARQTHP*LQWWAQ Trigger: CTGTGCCCACCATTGCAGCCATGGATGGGTTTGCCT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAAGTCCCTCCTGCTCCTaGGAGAAGTCCTCGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRSPSCS*EKSSSG Trigger: ACCACTCGAGGACTTCTCCCAGGAGCAGGAGGGACT...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTCAGCCTGTCCTGGGTTaGGATGTTCTGGGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAQPVLG*DVLGIA Trigger: TGCTATGCCCAGAACATCCCAACCCAGGACAGGCTG...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGCCTTCCAGCCTGTCCTaGGTTGGGATGTTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAPSSLS*VGMFWA Trigger: TGCCCAGAACATCCCAACCCAGGACAGGCTGGAAGG...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR TCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGAGCTCGTTTCTCCCTaGAGGCTGCCATTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAELVSP*RLPFLP Trigger: TGGAAGGAATGGCAGCCTTCAGGGAGAAACGAGCTC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGGACCTGTCAGAGCCTaGACTTGGATTTCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAGPVRA*TWISGV Trigger: GACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR GCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTTTTCTCCCTGAAGGCTaGCATTCCTTCCAGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAFLPEG*HSFQPV Trigger: GACAGGCTGGAAGGAATGGCAGCCTTCAGGGAGAAA...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTAGTCAGAGCCTGCACTTaGATTTCGGGTGTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALVRACT*ISGVLV Trigger: GACCAGGACACCCGAAATCCAAGTGCAGGCTCTGAC...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGGTCAGAGCCTGCACTTaGATTTCGGGTGTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAVRACT*ISGVLV Trigger: GACCAGGACACCCGAAATCCAAGTGCAGGCTCTGAC...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAAGGCAAACCCATCCATaGCTGCAATGGTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRRQTHP*LQWWAQ Trigger: CTGTGCCCACCATTGCAGCCATGGATGGGTTTGCCT...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACCATTCCTCTGTCGATaGCAACTTTGCCCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALPFLCR*QLCPGA Trigger: TGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGG...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGACCATTCCTCTGTCGATaGCAACTTTGCCCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRPFLCR*QLCPGA Trigger: TGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGG...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGACAGCCTGTCCTGGGTTaGGATGTTCTGGGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRQPVLG*DVLGIA Trigger: TGCTATGCCCAGAACATCCCAACCCAGGACAGGCTG...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| 3UTR CAA 72 bp | ATGGTGATCAGAGCCAATGACAAAGACCCGAAGTTTTaGAATGCAGAGAGTCCAGTCACTAGCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVIRANDKDPKF*NAESPVTSQGE Trigger: CTCACCTTGGCTAGTGACTGGACTCTCTGCATTCAAAAACTTCGGGTCTTTGTCATTGGCTCTGATCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 ENSMUST00000126900.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGCTTCAGGTCTGCACCTaGACAGAACACTCCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLALQVCT*TEHSLH Trigger: GTGAAGGGAGTGTTCTGTGCAGGTGCAGACCTGAAG...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACTTCAGGTCTGCACCTaGACAGAACACTCCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALLQVCT*TEHSLH Trigger: GTGAAGGGAGTGTTCTGTGCAGGTGCAGACCTGAAG...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTATCCACATCACTCATCTaGTCCCGCTCCTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALSTSLI*SRSFRS Trigger: AGACCTGAAGGAGCGGGAGCAGATGAGTGATGTGGA...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTCCACATCACTCATCTaGTCCCGCTCCTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLASTSLI*SRSFRS Trigger: AGACCTGAAGGAGCGGGAGCAGATGAGTGATGTGGA...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAAAACCCATCCATGGCTaGAATGGTGGGCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLIERLNSLSRIPLALQRKPIHG*NGGHRE Trigger: TTCCCTGTGCCCACCATTGCAGCCATGGATGGGTTT...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR GCA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGAAACCCATCCATGGCTaGAATGGTGGGCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISERLIERLNSLSRIPLAKPIHG*NGGHRE Trigger: TTCCCTGTGCCCACCATTGCAGCCATGGATGGGTTT...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTATCTCAGTGATTCCTTaGTTGGGACCTGTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRAISVIP*LGPVRA Trigger: GGCTCTGACAGGTCCCAACCAAGGAATCACTGAGAT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR TCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTTCATCAGAATCTCAGTaGTTCCTTGGTTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRASSESQ*FLGWDL Trigger: CAGGTCCCAACCAAGGAATCACTGAGATTCTGATGA...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTATCATCAGAATCTCAGTaGTTCCTTGGTTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALSSESQ*FLGWDL Trigger: CAGGTCCCAACCAAGGAATCACTGAGATTCTGATGA...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTAGCACATCTGTTCTATaGCCATCCCTGATGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LIERLNSLSRIPLALQRASTSVL*PSLMQC Trigger: ACATTGCATCAGGGATGGCCATAGAACAGATGTGCT...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTAAGCACATCTGTTCTATaGCCATCCCTGATGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SERLIERLNSLSRIPLALSTSVL*PSLMQC Trigger: ACATTGCATCAGGGATGGCCATAGAACAGATGTGCT...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS GCA 90 bp | CCTCGGAGCCGCTGGACAAAGGTCCCCACCTCCACATCACTCATCTaGTCCCGCTCCTTCAGGTCTGCACCTGCACAGAACACTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSRWTKVPTSTSLI*SRSFRSAPAQNTPF Trigger: GAAGGGAGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAGCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000135718.8 |
||
| CDS CCA 90 bp | AACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTTGCTaGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTTGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTPFTALLKSRTRTC*SSRSWARASSSLVG Trigger: CCCAACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS GCA 90 bp | CAGAACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTTaGTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: QNTPFTALLKSRTRT*WSSRSWARASSSSL Trigger: TAGTGAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS GCA 90 bp | CAGAACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTTaGTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QNTPFTALLKSRTRT*WSSRSWARASSSLV Trigger: AACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCCGCTGGACAAAGGTCCCCACCTCCACATCACTCATCTGCTCCCGCTCCTACATTCCCCAAGGCATaGCGGGCATTAGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAAGQRSPPPHHSSAPAPTFPKA*RALGLF Trigger: GAACAGACCTAATGCCCGCAATGCCTTGGGGAATGT...AGGAGCGGGAGCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS CCA 90 bp | AACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTTGCTaGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTCACTAACA | + |
|
Preference number: 5 (lower is better) Translates to: NTPFTALLKSRTRTC*SSRSWARASSSSLT Trigger: TGTTAGTGAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS CCA 90 bp | GCACTTCTGAAGAGCAGGACCCGGACTTGCTGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGCTCACTAACAAACACATTCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLKSRTRTCWSSRS*ARASSSSLTNTFPK Trigger: CTTGGGGAATGTGTTTGTTAGTGAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGCCTGTCCTGGGTTGGGATGTTCTGGGCATAGCACATCTGTTCTATGGTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPACPGLGCSGHSTSVLWCQSLH*DFGCPG Trigger: ACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACA...CCATAGAACAGATGTGCTATGCCCAGAACATCCCAACCCAGGACAGGCTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125647.8 ENSMUST00000130942.8 |
||
| CDS CCA 90 bp | GCATTGCGGGCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTTaGTTGGGACCTGTCAGAGCCTGCACTTGGATTTCGGGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALRALGLFIRISVIP*LGPVRACTWISGVL Trigger: CAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGCCCGCAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
||
| CDS-3UTR CAA 90 bp | GGCGAGGAACTTCACCTGCCTGTGTCTTCAAGTGCGTTCATATTGTCAAATGGGTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GEELHLPVSSSAFILSNGCQSLH*DFGCPG Trigger: ACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACA...CCCATTTGACAATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATGGTGTGTGCTTAAAGTTAGCTGGGTCACTTGCCCACAAATTTGGGAGAGAGCTTCCAGCAGCTaGGTTGGGACCTGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLWCVLKVSWVTCPQIWERASSS*VGTCQS Trigger: GCTCTGACAGGTCCCAACCAAGCTGCTGGAAGCTCT...CTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCACACACCATAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGACTTCCAGCAGCTTGGTaGGGACCTGTCAGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLIERLNSLSRIPLALQRLPAAW*GPVRAC Trigger: GCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGAAG...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTATGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SERLIERLNSLSRIPLALCQSLH*DFGCPG Trigger: ACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACA...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CAA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISERLIERLNSLSRIPLACQSLH*DFGCPG Trigger: ACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACA...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 ENSMUST00000125647.8 |
||
| CDS-3UTR CAA 90 bp | CTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAGCTCACTTGCCCACAAATTaGGGAGCTCGTTTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIERLNSLSRIPLALQRAHLPTN*GARFSL Trigger: CAGGGAGAAACGAGCTCCCAAATTTGTGGGCAAGTG...AGCTCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTAACATTCCCCAAGGCATaGCGGGCATTAGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SERLIERLNSLSRIPLALTFPKA*RALGLF Trigger: GAACAGACCTAATGCCCGCAATGCCTTGGGGAATGT...TAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CAA 90 bp | AGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGTTACAGAGAACATTCCCCAAGGCATaGCGGGCATTAGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLIERLNSLSRIPLALQRTFPKA*RALGLF Trigger: GAACAGACCTAATGCCCGCAATGCCTTGGGGAATGT...TCTCTGTAACGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS-3UTR CAA 90 bp | ATATCAGAGAGACTGATAGAGAGGTTAAATAGTTTGTCCAGAATTCCCCTTGCGAATCTCAGTGATTCCTaGGTTGGGACCTGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISERLIERLNSLSRIPLANLSDS*VGTCQS Trigger: GCTCTGACAGGTCCCAACCAAGGAATCACTGAGATT...CGCAAGGGGAATTCTGGACAAACTATTTAACCTCTCTATCAGTCTCTCTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052999.13 ENSMUST00000116309.10 |
||
| CDS TCA 72 bp | TTCGCTAGGGCCACGCCCAGGCAGCGAGGCAGCCTCTaGGTCCCTCCGATCTCACTCATCAGGCCTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FARATPRQRGSL*VPPISLIRPRS Trigger: GCTCCGAGGCCTGATGAGTGAGATCGGAGGGACTCAGAGGCTGCCTCGCTGCCTGGGCGTGGCCCTAGCGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135718.8 |
||
| CDS CAA 90 bp | GCCAGAGCTTCCAGCAGCTTGGTTGGGACCTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGTCGTCGCGTGAGAGGCGCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARASSSLVGTCQSLH*DFGCPGRRVRGAVP Trigger: CGGGACTGCGCCTCTCACGCGACGACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGAAGCTCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS GCA 72 bp | CCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTTaGTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFTALLKSRTRT*WSSRSWARASS Trigger: GCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000125647.8 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS CCA 72 bp | TTCACCGCACTTCTGAAGAGCAGGACCCGGACTTGCTaGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTALLKSRTRTC*SSRSWARASSS Trigger: GCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000125647.8 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS CCA 72 bp | AAGAGCAGGACCCGGACTTGCTGGTCTTCCCGAAGCTaGGCCAGAGCTTCCAGCAGCTTGGTTGGGACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KSRTRTCWSSRS*ARASSSLVGTC Trigger: ACAGGTCCCAACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS CCA 72 bp | GTCCCTCCGATCTCACTCATCAGGCCTCGGAGCCGCTaGACAAAGGTCCCCACCTCCACATCACTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPPISLIRPRSR*TKVPTSTSLIC Trigger: GCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGGAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135718.8 |
||
| CDS CAA 72 bp | TCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTaGCTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLHRTSEEQDPD*LVFPKLGQSFQ Trigger: CTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000125647.8 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS CAA 72 bp | TCCAGCAGCTTGGTTGGGACCTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGTCGTCGCGTGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLVGTCQSLH*DFGCPGRRVRG Trigger: GCCTCTCACGCGACGACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS CAA 90 bp | CTTGCTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTTGGTaGGGACCTGTCAGAGCCTGCACTTGGATTTCGGGTGTCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAGLPEAGPELPAAW*GPVRACTWISGVLV Trigger: GACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS CAA 90 bp | CGGACTTGCTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTaGGTTGGGACCTGTCAGAGCCTGCACTTGGATTTCGGGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RTCWSSRSWARASSS*VGTCQSLHLDFGCP Trigger: AGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
||
| CDS CAA 72 bp | GTTGGGATGTTCTCCATTCCTCTGTCGATGGCAACTTaGCCCAGGCGCACAGCAATGGGAGCCTGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGMFSIPLSMAT*PRRTAMGAWGR Trigger: CCTGCCCCAGGCTCCCATTGCTGTGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGGAGAACATCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106691.3 |
||
| CDS CAA 90 bp | CAGAATCTCAGTGATTCCTTGGTTGGGACCTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGTCGTCGCGTGAGAGGCGCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QNLSDSLVGTCQSLH*DFGCPGRRVRGAVP Trigger: CGGGACTGCGCCTCTCACGCGACGACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
||
| CDS CAA 90 bp | ACAGAACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTaGCTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: TEHSLHRTSEEQDPD*LVFPKLGQSFQQLT Trigger: AGTGAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 ENSMUST00000135718.8 |
||
| CDS CAA 90 bp | CTGTCCTGGGTTGGGATGTTCTCCATTCCTCTGTCGATGGCAACTTaGCCCAGGCGCACAGCAATGGGAGCCTGGGGCAGGATCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSWVGMFSIPLSMAT*PRRTAMGAWGRISC Trigger: ACAGGAGATCCTGCCCCAGGCTCCCATTGCTGTGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGGAGAACATCCCAACCCAGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106691.3 |
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| CDS CAA 90 bp | ACAGAACACTCCCTTCACCGCACTTCTGAAGAGCAGGACCCGGACTaGCTGGTCTTCCCGAAGCTGGGCCAGAGCTTCCAGCAGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TEHSLHRTSEEQDPD*LVFPKLGQSFQQLG Trigger: ACCAAGCTGCTGGAAGCTCTGGCCCAGCTTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125647.8 |
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| CDS TCA 72 bp | CTGCACCTGCACAGAACACTCCCTTCACCGCACTTCTaGAGAGCAGGACCCGGACTTGCTGGTCTTCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LHLHRTLPSPHF*RAGPGLAGLPE Trigger: TTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGTGCAGGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000125647.8 ENSMUST00000135718.8 |
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| CDS TCA 72 bp | ACCCACCTGCACAGAACACTCCCTTCACCGCACTTCTaGAGAGCAGGACCCGGACTTGCTGGTCTTCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: THLHRTLPSPHF*RAGPGLAGLPE Trigger: TTCGGGAAGACCAGCAAGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGTGCAGGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130942.8 |
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| CDS CCA 72 bp | GAAGAAGCGATCTCACTCATCAGGCCTCGGAGCCGCTaGACAAAGGTCCCCACCTCCACATCACTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: EEAISLIRPRSR*TKVPTSTSLIC Trigger: GCAGATGAGTGATGTGGAGGTGGGGACCTTTGTCCAGCGGCTCCGAGGCCTGATGAGTGAGATCGCTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116307.8 |
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| CDS CAA 72 bp | AGTGATTCCTTGGTTGGGACCTGTCAGAGCCTGCACTaGGATTTCGGGTGTCCTGGTCGTCGCGTGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SDSLVGTCQSLH*DFGCPGRRVRG Trigger: GCCTCTCACGCGACGACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS GCA 72 bp | CTCCACATCACTCATCTGCTCCCGCTCCTTCAGGTCTaGACCTGCACAGAACACTCCCTTCACCGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHITHLLPLLQV*TCTEHSLHRTS Trigger: AGAAGTGCGGTGAAGGGAGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAGCAGATGAGTGATGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000135718.8 |
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| CDS CCA 72 bp | TGTCCTGGGTTGGGATGTTCTCCATTCCTCTGTCGATaGCAACTTTGCCCAGGCGCACAGCAATGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CPGLGCSPFLCR*QLCPGAQQWEP Trigger: AGGCTCCCATTGCTGTGCGCCTGGGCAAAGTTGCCATCGACAGAGGAATGGAGAACATCCCAACCCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106691.3 |
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| CDS TCA 72 bp | CTGGGAGAAGTCCTCGAGTGGTCTCAATTAGCCCCATaGCAGCCGAAGAAGCGATCTCACTCATCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LGEVLEWSQLAP*QPKKRSHSSGL Trigger: GAGGCCTGATGAGTGAGATCGCTTCTTCGGCTGTCATGGGGCTAATTGAGACCACTCGAGGACTTCTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116307.8 |
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| CDS CAA 90 bp | TTGCGGGCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTTGGTaGGGACCTGTCAGAGCCTGCACTTGGATTTCGGGTGTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LRALGLFIRISVIPW*GPVRACTWISGVLV Trigger: GACCAGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGCCCGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS CAA 90 bp | GGCATTGCGGGCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTaGGTTGGGACCTGTCAGAGCCTGCACTTGGATTTCGGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GIAGIRSVHQNLSDS*VGTCQSLHLDFGCP Trigger: AGGACACCCGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGCCCGCAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS CAA 90 bp | GCCAGAGCTTCCAGCAGCTCACTAACAAACACATTCCCCAAGGCATaGCGGGCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: ARASSSSLTNTFPKA*RALGLFIRISVIPW Trigger: CCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGCCCGCAATGCCTTGGGGAATGTGTTTGTTAGTGAGCTGCTGGAAGCTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS CCA 72 bp | GCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTTaGTTGGGACCTGTCAGAGCCTGCACTTGGATTTCG | + |
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Preference number: 6 (lower is better) Translates to: ALGLFIRISVIP*LGPVRACTWIS Trigger: CGAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS CAA 72 bp | GGCATTAGGTCTGTTCATCAGAATCTCAGTGATTCCTaGGTTGGGACCTGTCAGAGCCTGCACTTGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: GIRSVHQNLSDS*VGTCQSLHLDF Trigger: GAAATCCAAGTGCAGGCTCTGACAGGTCCCAACCAAGGAATCACTGAGATTCTGATGAACAGACCTAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 |
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| CDS CAA 72 bp | TCCAGCAGCTCACTAACAAACACATTCCCCAAGGCATaGCGGGCATTAGGTCTGTTCATCAGAATCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSLTNTFPKA*RALGLFIRISV Trigger: CACTGAGATTCTGATGAACAGACCTAATGCCCGCAATGCCTTGGGGAATGTGTTTGTTAGTGAGCTGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052999.13 ENSMUST00000116307.8 ENSMUST00000116309.10 ENSMUST00000130942.8 ENSMUST00000135718.8 |
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