Pregenerated sensors for DUXF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075046Ensembl transcript IDs: ENSMUST00000174056.4, ENSMUST00000176875.4
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATTTCGGGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCTTaGTGGGATGGGTCACTTCTCCAGTTCCAAATCGGGTCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: CISGSHWSWVFDAHP*WDGSLLQFQIGSLQ Trigger: CTGAAGAGACCCGATTTGGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 90 bp | ATTTCGGGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCTTGCTaGGATGGGTCACTTCTCCAGTTCCAAATCGGGTCTCTTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: ISGSHWSWVFDAHPC*DGSLLQFQIGSLQD Trigger: GTCCTGAAGAGACCCGATTTGGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 90 bp | CTTATAGTTAGCGAGACACCTTGCATTTCGGGAAGTCACTGGAGTTaGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LIVSETPCISGSHWS*VFDAHPCWDGSLLQ Trigger: CTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCTAACTATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 90 bp | TCAATCCTTATAGTTAGCGAGACACCTTGCATTTCGGGAAGTCACTaGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: SILIVSETPCISGSH*SWVFDAHPCWDGSL Trigger: AAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCTAACTATAAGGATTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR GCA 90 bp | TATTATCCCCACCTGCAATCAATCCTTATAGTTAGCGAGACACCTTaGATTTCGGGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCT | + |
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Preference number: 1 (lower is better) Translates to: YYPHLQSILIVSETP*ISGSHWSWVFDAHP Trigger: AGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCTAACTATAAGGATTGATTGCAGGTGGGGATAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCCGTGTGATTTCCTGGGGTCCACTGGAGCCAGTCACTTGGTGTAGCCCTGGAAGTCACTGGAGTTaGGTTTTTGATGCACATCCT | + |
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Preference number: 2 (lower is better) Translates to: VSRVISWGPLEPVTWCSPGSHWS*VFDAHP Trigger: AGGATGTGCATCAAAAACCCAACTCCAGTGACTTCC...AGGGCTACACCAAGTGACTGGCTCCAGTGGACCCCAGGAAATCACACGGGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCCGTGTGATTTCCTGGGGTCCACTGGAGCCAGTCACTTGGTGTAGCCCTATTTCGGGAAGTCACTaGAGTTGGGTTTTTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: VSRVISWGPLEPVTWCSPISGSH*SWVFDA Trigger: TGCATCAAAAACCCAACTCCAGTGACTTCCCGAAAT...AGGGCTACACCAAGTGACTGGCTCCAGTGGACCCCAGGAAATCACACGGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CAA 90 bp | AAAGACCTATGGGTAGTAGATATTAAAAGACTGGCCTGTAAAACCTaGCACAGCTCTGCACGAAGCATCTGTAAGGATAACAGCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KDLWVVDIKRLACKT*HSSARSICKDNSSP Trigger: TGGACTGCTGTTATCCTTACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTTTAATATCTACTACCCATAGGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR TCA 72 bp | ATCTGTCCCTGTAGCAGAGTCTCTCACTTTCAGGGCTaGTTTCCTAATCCCCGGGCCCTGGAGAAGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: ICPCSRVSHFQG*FPNPRALEKAL Trigger: AAGTGCCTTCTCCAGGGCCCGGGGATTAGGAAATCAGCCCTGAAAGTGAGAGACTCTGCTACAGGGACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR GCA 72 bp | GGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCTTaGTGGGATGGGTCACTTCTCCAGTTCCAAATCGGG | + |
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Preference number: 3 (lower is better) Translates to: GSHWSWVFDAHP*WDGSLLQFQIG Trigger: CCCGATTTGGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 72 bp | AGCGAGACACCTTGCATTTCGGGAAGTCACTGGAGTTaGGTTTTTGATGCACATCCTTGCTGGGATGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SETPCISGSHWS*VFDAHPCWDGS Trigger: TGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 72 bp | AGTCACTGGAGTTGGGTTTTTGATGCACATCCTTGCTaGGATGGGTCACTTCTCCAGTTCCAAATCGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SHWSWVFDAHPC*DGSLLQFQIGS Trigger: AGACCCGATTTGGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CCA 72 bp | ATAGTTAGCGAGACACCTTGCATTTCGGGAAGTCACTaGAGTTGGGTTTTTGATGCACATCCTTGCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: IVSETPCISGSH*SWVFDAHPCWD Trigger: ATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCTAACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR GCA 72 bp | CACCTGCAATCAATCCTTATAGTTAGCGAGACACCTTaGATTTCGGGAAGTCACTGGAGTTGGGTTTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: HLQSILIVSETP*ISGSHWSWVFD Trigger: ATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCTCGCTAACTATAAGGATTGATTGCAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR TCA 90 bp | GTGTCCCGTGTGATTTCCTGGGGTCCACTGGAGCCAGTCACTTGGTGTAGCCCTACTTCGGTCAGCAGTTaGTCAAGGAAGAGCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSRVISWGPLEPVTWCSPTSVSS*SRKSSR Trigger: TCTGGAGCTCTTCCTTGATCAACTGCTGACCGAAGT...AGGGCTACACCAAGTGACTGGCTCCAGTGGACCCCAGGAAATCACACGGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | AGTCACTGGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCGTTCCAGAGGGCCTGTaGTGTCTGCTTGAGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SHWSWVFDAHPCWDGSLLVPEGL*CLLECG Trigger: CCCGCACTCAAGCAGACAGCACAGGCCCTCTGGAAC...GAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTTGTTGTTGAGGAGTCACTATTGGCCTCTCCATCTGTCCCTGTAGCAGAGGCTGGGATTCTCTaGAGAAGGTTGGCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: RLLVVEESLLASPSVPVAEAGIL*RRLARC Trigger: GCATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTC...TGCTACAGGGACAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CCA 90 bp | GGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCCAGTTCCCAGGGCTGTGCCACTTaGGAAGGAAAGGACTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GVGFLMHILAGMGHFSSSQGCAT*EGKDSL Trigger: CAGAGAGTCCTTTCCTTCCCAAGTGGCACAGCCCTG...GGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | GCGTTATCTTTAGGCTCCTTGTTGTTGAGGAGTCACTATTGGCCTCTCCATCTGACAGGGGAAGGCCCCTaGTCCTCAAGTTGGACTTCG | + |
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Preference number: 4 (lower is better) Translates to: ALSLGSLLLRSHYWPLHLTGEGP*SSSWTS Trigger: CGAAGTCCAACTTGAGGAGCAGGGGCCTTCCCCTGT...CAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCTAAAGATAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CCA 90 bp | AAAGACTGGCCTGTAAAACCTTGCACAGCTCTGCACGAAGCATCTGTAAGGATAGAGGGCTGTGCCACTTaGGGAGGCTGGGATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDWPVKPCTALHEASVRIEGCAT*GGWDSL Trigger: CAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTC...TATCCTTACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR TCA 90 bp | AGTCACTGGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCACTTCGTCCAGCAGTTaGTCAAGGAGGAGGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SHWSWVFDAHPCWDGSLLTSSSS*SRRRSS Trigger: GGAACTCCTCCTCCTTGATCAACTGCTGGACGAAGT...GAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | GGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCCAGTTCCGGATCGAGGTATCCATaGCCGAATTTGCTGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVGFLMHILAGMGHFSSSGSRYP*PNLLLP Trigger: AGGAAGCAGCAAATTCGGGCATGGATACCTCGATCC...GGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CCA 90 bp | AGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCCAGTTCCAAGGCAGTAAGCTGTCCTaGGAACCTTCATGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SWVFDAHPCWDGSLLQFQGSKLS*EPSCSL Trigger: CAGGGAGCATGAAGGTTCCCAGGACAGCTTACTGCC...TTGGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CAA 72 bp | CACCTTGCATTTCGGGAAGTCACTGGAGTTGGGTTTTaGATGCACATCCTTGCTGGGATGGGTCACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLAFREVTGVGF*MHILAGMGHFS Trigger: GGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | AAAGACTGGCCTGTAAAACCTTGCACAGCTCTGCACGAAGCATCTGTAAGGATACGATCCACAGGGCTGTaGCACTTGGGAAGGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KDWPVKPCTALHEASVRIRSTGL*HLGRKG Trigger: TCCTTTCCTTCCCAAGTGGCACAGCCCTGTGGATCG...TATCCTTACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CCA 90 bp | GCGTTATCTTTAGGCTCCTTGTTGTTGAGGAGTCACTATTGGCCTCTCCATCTGCCAATCCAGTGGGGCTaGCACATGCTCTTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ALSLGSLLLRSHYWPLHLPIQWG*HMLFLL Trigger: CAAAAGGAAGAGCATGTGCCAGCCCCACTGGATTGG...CAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCTAAAGATAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CAA 72 bp | GCCCTTCTTTTGGCGTTATCTTTAGGCTCCTTGTTGTaGAGGAGTCACTATTGGCCTCTCCATCTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ALLLALSLGSLL*RSHYWPLHLSL Trigger: CAGGGACAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCTAAAGATAACGCCAAAAGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | AGACACCTTGCATTTCGGGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCTTAACCTTCATGCTCCCTaGTGCCAGGATTTCTACCCC | + |
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Preference number: 4 (lower is better) Translates to: RHLAFREVTGVGFLMHILNLHAP*CQDFYP Trigger: GGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTT...AAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | ATCTGTAAGGATAACAGCAGTCCATATAAGCCAAGGAAGGAGTCCACTCTCCCCAAGGAAAGGACTCTCTaGAGAAGGAGTTTGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: ICKDNSSPYKPRKESTLPKERTL*RRSLSR Trigger: GCGACTCAAACTCCTTCTGCAGAGAGTCCTTTCCTT...GGGGAGAGTGGACTCCTTCCTTGGCTTATATGGACTGCTGTTATCCTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | AAAAGACTGGCCTGTAAAACCTTGCACAGCTCTGCACGAAGCATCTGTAAGGATCTTCATGCTCCCTGCTaGCAGGATTTCTACCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: KRLACKTLHSSARSICKDLHAPC*QDFYPN Trigger: ATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAG...ATCCTTACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR GCA 90 bp | TATTATCCCCACCTGCAATCAATCCTTATAGTTAGCGAGACACCTTGCATTTCGAGTGGGGCTGGCACATaGTCTTCCTTTTGGACTTCG | + |
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Preference number: 4 (lower is better) Translates to: YYPHLQSILIVSETPCISSGAGT*SSFWTS Trigger: CGAAGTCCAAAAGGAAGAGCATGTGCCAGCCCCACT...CGAAATGCAAGGTGTCTCGCTAACTATAAGGATTGATTGCAGGTGGGGATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR TCA 90 bp | GATATTAAAAGACTGGCCTGTAAAACCTTGCACAGCTCTGCACGAAGCATCTGTGATATTCTTCTGGAGTaGGAGGCAGATCAGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: DIKRLACKTLHSSARSICDILLE*EADQVL Trigger: CAACACCTGATCTGCCTCTCACTCCAGAAGAATATC...ACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTTTAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CCA 90 bp | AGACACCTTGCATTTCGGGAAGTCACTGGAGTTGGGTTTTTGATGCACATCCTTAGTCTGATATTCTTCTaGAGTGAGAGGCAGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: RHLAFREVTGVGFLMHILSLIFF*SERQIR Trigger: CCTGATCTGCCTCTCACTCCAGAAGAATATCAGACT...AAGGATGTGCATCAAAAACCCAACTCCAGTGACTTCCCGAAATGCAAGGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| 3UTR CAA 72 bp | TGGGTAGTAGATATTAAAAGACTGGCCTGTAAAACCTaGCACAGCTCTGCACGAAGCATCTGTAAGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: WVVDIKRLACKT*HSSARSICKDN Trigger: GTTATCCTTACAGATGCTTCGTGCAGAGCTGTGCAAGGTTTTACAGGCCAGTCTTTTAATATCTACTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS CCA 90 bp | TGCGAGGCCTTCTGCCAGATGAGCGCAGGCCTCTACCCTGTGGCCTaGATCCAAGCTCTTCCTGGAGCTGTGGCGAGGCTAGCCGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CEAFCQMSAGLYPVA*IQALPGAVARLAAW Trigger: CCAGGCGGCTAGCCTCGCCACAGCTCCAGGAAGAGCTTGGATCCAGGCCACAGGGTAGAGGCCTGCGCTCATCTGGCAGAAGGCCTCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | TTGATAGCAGGGCCTGCTCTTGCCAGGCCTGCCAAACCATCTTCCTaGGCCGCCGGGATTCCCGTGCCACACCACTGCCACCAACAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LIAGPALARPAKPSS*AAGIPVPHHCHQQG Trigger: GCCCTGTTGGTGGCAGTGGTGTGGCACGGGAATCCCGGCGGCGCAGGAAGATGGTTTGGCAGGCCTGGCAAGAGCAGGCCCTGCTATCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | GCCTGCTTGAGTGGGGGCCTCTTGTTGGCCTGCTCCACGGGGCTGTaGCACTTGGAAAGGCTGGGACTCTCTGCAGAAGGAGGGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: ACLSGGLLLACSTGL*HLERLGLSAEGGQV Trigger: GACTTGCCCTCCTTCTGCAGAGAGTCCCAGCCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CCCACCTTGAGTGGGGGCCTGTGCTTGGCCTGGTCCAGAGGGCTGTaGCACTTGGGGAGGCTGGGATTCTCTGCAGAAGGTTGGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PTLSGGLCLAWSRGL*HLGRLGFSAEGWPD Trigger: ATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAAGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CCCACCTTGAGTCGGGGCCTGTGCTTTGCCTGGTCCAGAGGGCTGTaGCACTTGGGGAGGCTGGGATTCTCTGCAGAAGGTTGGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PTLSRGLCFAWSRGL*HLGRLGFSAEGWPD Trigger: ATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCAAAGCACAGGCCCCGACTCAAGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS TCA 90 bp | GGTTCCTCTCAAAGGCTTGCCCTAGGATCCTGCGCTGTAGCGAGGTaGGTCGAGTGCGAGGCCTTCTGCCAGATGAGCGCAGGCCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: GSSQRLALGSCAVAR*VECEAFCQMSAGLY Trigger: GTAGAGGCCTGCGCTCATCTGGCAGAAGGCCTCGCACTCGACTCACCTCGCTACAGCGCAGGATCCTAGGGCAAGCCTTTGAGAGGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | TCCTCCCTGGTAGCAAAGCCTGGTCGTGGGTTCCTCTCAAAGGCTTaGCCTAGGATCCTGCGCTGTAGCGAGGTGAGTCGAGTGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSLVAKPGRGFLSKA*PRILRCSEVSRVRG Trigger: GCCTCGCACTCGACTCACCTCGCTACAGCGCAGGATCCTAGGGCAAGCCTTTGAGAGGAACCCACGACCAGGCTTTGCTACCAGGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CCGACCCTTGTGACGCCAGCAAGTCTTGATCTTGAGCTGTGGGCCTaGCCCTCCTGTGGCGCCGCCGAGCTCTTCGGTTTTGAAACCATA | + |
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Preference number: 5 (lower is better) Translates to: PTLVTPASLDLELWA*PSCGAAELFGFETI Trigger: TATGGTTTCAAAACCGAAGAGCTCGGCGGCGCCACAGGAGGGGCAGGCCCACAGCTCAAGATCAAGACTTGCTGGCGTCACAAGGGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | TTGGACTTCATCCAGCAGCTGATCAAGGAGGGGTTCCAGAGAGCCTaGGTTGCCTGCTTGAGTGGGGGCCTCTTGTTGGCCTGCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: LDFIQQLIKEGFQRA*VACLSGGLLLACST Trigger: CGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGCAACGCAGGCTCTCTGGAACCCCTCCTTGATCAGCTGCTGGATGAAGTCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 90 bp | GCTAGGGCTCGAGGTATCCATGCCCGTACTTCCTGCTTCTTCCTGTaGCAACAAGCTCTCCTGGGCACCTTCACGCTCTCTGCCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: ARARGIHARTSCFFL*QQALLGTFTLSAFR Trigger: CCGGAAGGCAGAGAGCGTGAAGGTGCCCAGGAGAGCTTGTTGCCACAGGAAGAAGCAGGAAGTACGGGCATGGATACCTCGAGCCCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS TCA 90 bp | ACTGCGATTCCTGCGGTTCTGAAACCACACGCGGATGCGGCAATCTaGGACCCCCATTCGCTTGGCCAGCTCCTTCCTCTCCTTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: TAIPAVLKPHADAAI*DPHSLGQLLPLLEA Trigger: AGCTTCAAGGAGAGGAAGGAGCTGGCCAAGCGAATGGGGGTCTCAGATTGCCGCATCCGCGTGTGGTTTCAGAACCGCAGGAATCGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 90 bp | AGAGGGCTGTGCCACTTGGGGAGGCTGGGATTCTCTGCAGAAGGTTaGCCAGATGCTAGGGATCGAGGTATCCATGCCCGAATTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RGLCHLGRLGFSAEG*PDARDRGIHARICC Trigger: GCAGCAAATTCGGGCATGGATACCTCGATCCCTAGCATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CTTCTTCCTGTGGCCAAAAGCTCTTCTGGGAACCTTCATGCACCCTaGCACCAGGGTCTCCATCCAAATTCAGAGGGGCTGGAGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLPVAKSSSGNLHAP*HQGLHPNSEGLEQA Trigger: AGCCTGCTCCAGCCCCTCTGAATTTGGATGGAGACCCTGGTGGCAGGGTGCATGAAGGTTCCCAGAAGAGCTTTTGGCCACAGGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CTTCTCTCTGTGGCCAAAAGCTCTCCCACGAACCTTCATGCACCCTaGCACCAGGATCTACATCCCAATTCAGAGGGGCTGGAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSVAKSSPTNLHAP*HQDLHPNSEGLEHA Trigger: AGCATGCTCCAGCCCCTCTGAATTGGGATGTAGATCCTGGTGGCAGGGTGCATGAAGGTTCGTGGGAGAGCTTTTGGCCACAGAGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | CTTCCTGCTTCTCTCTGTGGCCAAAAGCTCTCCCACGAACCTTCATaGACCCTGCCACCAGGATCTACATCCCAATTCAGAGGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPASLCGQKLSHEPS*TLPPGSTSQFRGAG Trigger: TCCAGCCCCTCTGAATTGGGATGTAGATCCTGGTGGCAGGGTGCATGAAGGTTCGTGGGAGAGCTTTTGGCCACAGAGAGAAGCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 90 bp | GGAACCTTCATGCTCCCTGCTGCCAGGATTTCTACCCCAATCCAGTaGGGCTGGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTFMLPAARISTPIQ*GWHMLFLLDFVQQL Trigger: CAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGCCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS-3UTR CAA 90 bp | AGGCTCCTTGTTGTTGAGGAGTCACTATTGGCCTCTCCATCTGTCCCTGTAGCAAGAGGGCTGTGCCACTaGGGGAGGCTGGGATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLVVEESLLASPSVPVARGLCH*GRLGFS Trigger: AGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCT...TGCTACAGGGACAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS CCA 90 bp | GGAACCTTCATGCTCCCTGCTGCCAGGATTTCTACCCCAATCCAGTaGGACTGGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTFMLPAARISTPIQ*DWHMLFLLDFVQQL Trigger: CAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGTCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 90 bp | ACTCTCTGCAGAAGGAGTTTGAGTCGCTGGGGCTTGAAGTATCCATaGCTGTACTTCCTGCTTCTTCCTGTGGCCAAAAGCTCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLCRRSLSRWGLKYP*LYFLLLPVAKSSSG Trigger: CCCAGAAGAGCTTTTGGCCACAGGAAGAAGCAGGAAGTACAGGCATGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 90 bp | TTCATGCTCCCTGCTGCCAGGATTTCTACCCCAATCCAGTGGGACTaGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAGTTGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMLPAARISTPIQWD*HMLFLLDFVQQLIK Trigger: CTTGATCAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGTCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS-3UTR CAA 90 bp | TATTATCCCCACCTGCAATCAATCCTTATAGTTAGCGAGACACCTTGCATTTCGGTCGGGGCCTGTGCTTaGCCTGGTCCAGAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YYPHLQSILIVSETPCISVGACA*PGPEGC Trigger: ACAGCCCTCTGGACCAGGCAAAGCACAGGCCCCGAC...CGAAATGCAAGGTGTCTCGCTAACTATAAGGATTGATTGCAGGTGGGGATAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CAA 90 bp | GGAGTTGGGTTTTTGATGCACATCCTTGCTGGGATGGGTCACTTCTCCAGTTCCGAGGCAGATCAGGTGTaGTGTCCATTTGCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GVGFLMHILAGMGHFSSSEADQV*CPFAPM Trigger: CATGGGAGCAAATGGACACAACACCTGATCTGCCTC...GGAACTGGAGAAGTGACCCATCCCAGCAAGGATGTGCATCAAAAACCCAACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS-3UTR CAA 90 bp | GCGTTATCTTTAGGCTCCTTGTTGTTGAGGAGTCACTATTGGCCTCTCCATCTGGACTTCGTCCAGCAGTaGATCAAGGAGGAGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALSLGSLLLRSHYWPLHLDFVQQ*IKEEEF Trigger: GAACTCCTCCTCCTTGATCAACTGCTGGACGAAGTC...CAGATGGAGAGGCCAATAGTGACTCCTCAACAACAAGGAGCCTAAAGATAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174056.4 |
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| CDS GCA 72 bp | CAGGGGGTCCGTGTTCCCACCTTGAGTGGGGGCCTGTaGTTGGCCTGGTCCAGAGGGCTGTGCCACTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGVRVPTLSGGL*LAWSRGLCHLG Trigger: CCCCAAGTGGCACAGCCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAAGGTGGGAACACGGACCCCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | CGTGTTCCCACCTTGAGTGGGGGCCTGTGCTTGGCCTaGTCCAGAGGGCTGTGCCACTTGGGGAGGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPTLSGGLCLA*SRGLCHLGRLG Trigger: TCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAAGGTGGGAACACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | GCAAGAGCTCCAGGGGGTCCGTGTTCCCACCTTGAGTaGGGGCCTGTGCTTGGCCTGGTCCAGAGGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ARAPGGPCSHLE*GPVLGLVQRAV Trigger: CACAGCCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAAGGTGGGAACACGGACCCCCTGGAGCTCTTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | CAGAGGGTCCGTGTTCCCACCTTGAGTCGGGGCCTGTaGTTTGCCTGGTCCAGAGGGCTGTGCCACTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRVRVPTLSRGL*FAWSRGLCHLG Trigger: CCCCAAGTGGCACAGCCCTCTGGACCAGGCAAAGCACAGGCCCCGACTCAAGGTGGGAACACGGACCCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CCA 72 bp | AGGCCTCTACCCTGTGGCCTGGATCCAAGCTCTTCCTaGAGCTGTGGCGAGGCTAGCCGCCTGGAGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLPCGLDPSSS*SCGEASRLEPL Trigger: CAGAGGCTCCAGGCGGCTAGCCTCGCCACAGCTCCAGGAAGAGCTTGGATCCAGGCCACAGGGTAGAGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | CGTGTTCCCACCTTGAGTCGGGGCCTGTGCTTTGCCTaGTCCAGAGGGCTGTGCCACTTGGGGAGGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPTLSRGLCFA*SRGLCHLGRLG Trigger: TCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCAAAGCACAGGCCCCGACTCAAGGTGGGAACACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TGCGTTGCCTGCTTGAGTGGGGGCCTCTTGTTGGCCTaGTCCACGGGGCTGTGCCACTTGGAAAGGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CVACLSGGLLLA*STGLCHLERLG Trigger: TCCCAGCCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGCAACGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | AGAGCCTGCGTTGCCTGCTTGAGTGGGGGCCTCTTGTaGGCCTGCTCCACGGGGCTGTGCCACTTGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RACVACLSGGLL*ACSTGLCHLER Trigger: CCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGCAACGCAGGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CAGAGAGCCTGCGTTGCCTGCTTGAGTGGGGGCCTCTaGTTGGCCTGCTCCACGGGGCTGTGCCACTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QRACVACLSGGL*LACSTGLCHLE Trigger: TTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGCAACGCAGGCTCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | ATAGAGCAAGAGCTCCAGGGGGTCCGTGTTCCCACCTaGAGTGGGGGCCTGTGCTTGGCCTGGTCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IEQELQGVRVPT*SGGLCLAWSRG Trigger: CCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAAGGTGGGAACACGGACCCCCTGGAGCTCTTGCTCTAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | AGCTGTGGGCCTGCCCCTCCTGTGGCGCCGCCGAGCTCTTCGGTTTaGAAACCATATGTGGATCGTGTCCTCGGGCAACCCTGTGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: SCGPAPPVAPPSSSV*KPYVDRVLGQPCVT Trigger: CGTGACACAGGGTTGCCCGAGGACACGATCCACATATGGTTTCAAAACCGAAGAGCTCGGCGGCGCCACAGGAGGGGCAGGCCCACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | TTGAGTGGGGGCCTCTTGTTGGCCTGCTCCACGGGGCTGTGCCACTaGGAAAGGCTGGGACTCTCTGCAGAAGGAGGGCAAGTCGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGGLLLACSTGLCH*ERLGLSAEGGQVAR Trigger: CCTAGCGACTTGCCCTCCTTCTGCAGAGAGTCCCAGCCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | TTGAGTGGGGGCCTGTGCTTGGCCTGGTCCAGAGGGCTGTGCCACTaGGGGAGGCTGGGATTCTCTGCAGAAGGTTGGCCAGATGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGGLCLAWSRGLCH*GRLGFSAEGWPDAR Trigger: CCTAGCATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCCAAGCACAGGCCCCCACTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | AGTGGGGGCCTCTTGTTGGCCTGCTCCACGGGGCTGTaGCACTTGGAAAGGCTGGGACTCTCTGCAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGGLLLACSTGL*HLERLGLSAEG Trigger: TCCTTCTGCAGAGAGTCCCAGCCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCCCCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | CTGATCAAGGAGGGGTTCCAGAGAGCCTGCGTTGCCTaGTTGAGTGGGGGCCTCTTGTTGGCCTGCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LIKEGFQRACVA*LSGGLLLACST Trigger: CGTGGAGCAGGCCAACAAGAGGCCCCCACTCAAGCAGGCAACGCAGGCTCTCTGGAACCCCTCCTTGATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | AGTCGGGGCCTGTGCTTTGCCTGGTCCAGAGGGCTGTaGCACTTGGGGAGGCTGGGATTCTCTGCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRGLCFAWSRGL*HLGRLGFSAEG Trigger: ACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCAAAGCACAGGCCCCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CCA 72 bp | TGGCCTGGTCCAGAGGGCTGTGCCACTTGGGGAGGCTaGGATTCTCTGCAGAAGGTTGGCCAGATGCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WPGPEGCATWGG*DSLQKVGQMLG Trigger: CCCTAGCATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCACAGCCCTCTGGACCAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CCTGCCCCTCCTGTGGCGCCGCCGAGCTCTTCGGTTTaGAAACCATATGTGGATCGTGTCCTCGGGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: PAPPVAPPSSSV*KPYVDRVLGQP Trigger: GGGTTGCCCGAGGACACGATCCACATATGGTTTCAAAACCGAAGAGCTCGGCGGCGCCACAGGAGGGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | GGCCTCTTGTTGGCCTGCTCCACGGGGCTGTGCCACTaGGAAAGGCTGGGACTCTCTGCAGAAGGAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLLLACSTGLCH*ERLGLSAEGGQ Trigger: TTGCCCTCCTTCTGCAGAGAGTCCCAGCCTTTCCAAGTGGCACAGCCCCGTGGAGCAGGCCAACAAGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS TCA 72 bp | CAAAGGCTTGCCCTAGGATCCTGCGCTGTAGCGAGGTaGGTCGAGTGCGAGGCCTTCTGCCAGATGAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QRLALGSCAVAR*VECEAFCQMSA Trigger: TGCGCTCATCTGGCAGAAGGCCTCGCACTCGACTCACCTCGCTACAGCGCAGGATCCTAGGGCAAGCCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | TTCTGCCAGATGAGCGCAGGCCTCTACCCTGTGGCCTaGATCCAAGCTCTTCCTGGAGCTGTGGCGAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: FCQMSAGLYPVA*IQALPGAVARL Trigger: TAGCCTCGCCACAGCTCCAGGAAGAGCTTGGATCCAGGCCACAGGGTAGAGGCCTGCGCTCATCTGGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | TGGCCCGATCCACAGGGCTGTGCCACTTGGGAAGTCTaGGACTCTCTGCAGAAGGAGTTTGAGTCGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WPDPQGCATWEV*DSLQKEFESLG Trigger: CCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGGCACAGCCCTGTGGATCGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | AGTGCGGGCATCTTCTTGGCCCGATCCACAGGGCTGTaGCACTTGGGAAGTCTGGGACTCTCTGCAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGIFLARSTGL*HLGSLGLSAEG Trigger: TCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGGCACAGCCCTGTGGATCGGGCCAAGAAGATGCCCGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | AGGGCCTGTGCTGTTTGCTTGAGTGCGGGCATCTTCTaGGCCCGATCCACAGGGCTGTGCCACTTGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RACAVCLSAGIF*ARSTGLCHLGS Trigger: ACTTCCCAAGTGGCACAGCCCTGTGGATCGGGCCAAGAAGATGCCCGCACTCAAGCAAACAGCACAGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | AAGGAGGAGGAGTTCCAGAGGGCCTGTGCTGTTTGCTaGAGTGCGGGCATCTTCTTGGCCCGATCCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KEEEFQRACAVC*SAGIFLARSTG Trigger: CCCTGTGGATCGGGCCAAGAAGATGCCCGCACTCAAGCAAACAGCACAGGCCCTCTGGAACTCCTCCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | CACAGGGGAAGGCCCCTGCTCCTCAAGTTGGACTTCGGTCAGCAGTaGATCAAGGAAGAGCTCCAGAGGGTCCGTGTTCCCACCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HRGRPLLLKLDFGQQ*IKEELQRVRVPTLS Trigger: ACTCAAGGTGGGAACACGGACCCTCTGGAGCTCTTCCTTGATCAACTGCTGACCGAAGTCCAACTTGAGGAGCAGGGGCCTTCCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS TCA 72 bp | GGCCCCTGCTCCTCAAGTTGGACTTCGGTCAGCAGTTaGTCAAGGAAGAGCTCCAGAGGGTCCGTGTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPCSSSWTSVSS*SRKSSRGSVFP Trigger: TGGGAACACGGACCCTCTGGAGCTCTTCCTTGATCAACTGCTGACCGAAGTCCAACTTGAGGAGCAGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TTAAAAGTTGATAGCAGGGCCTGCTCTTGCCAGGCCTaGCAAACCATCTTCCTGCGCCGCCGGGATTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LKVDSRACSCQA*QTIFLRRRDSR Trigger: ACGGGAATCCCGGCGGCGCAGGAAGATGGTTTGGCAGGCCTGGCAAGAGCAGGCCCTGCTATCAACTTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | CTCTTCTCCTTAAAAGTTGATAGCAGGGCCTGCTCTTaGCAGGCCTGCCAAACCATCTTCCTGCGCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LFSLKVDSRACS*QACQTIFLRRR Trigger: CCGGCGGCGCAGGAAGATGGTTTGGCAGGCCTGGCAAGAGCAGGCCCTGCTATCAACTTTTAAGGAGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TCTTTGAGGCATGCCCCTCCTCTCCACTGCGATTCCTaGGGTTCTGAAACCACACGCGGATGCGGCAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRHAPPLHCDS*GSETTRGCGNL Trigger: CAGATTGCCGCATCCGCGTGTGGTTTCAGAACCGCAGGAATCGCAGTGGAGAGGAGGGGCATGCCTCAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GTAGCAAAGCCTGGTCGTGGGTTCCTCTCAAAGGCTTaGCCTAGGATCCTGCGCTGTAGCGAGGTGAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VAKPGRGFLSKA*PRILRCSEVSR Trigger: TCGACTCACCTCGCTACAGCGCAGGATCCTAGGGCAAGCCTTTGAGAGGAACCCACGACCAGGCTTTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | AGTGCGGGCATCTTCTTGGCCCGATCCACAGGGCTGTaGCACTTGGGAAGGAAAGGACTCTCTGCAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGIFLARSTGL*HLGRKGLSAEG Trigger: TCCTTCTGCAGAGAGTCCTTTCCTTCCCAAGTGGCACAGCCCTGTGGATCGGGCCAAGAAGATGCCCGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | ATCAAGGAGGAGGAGTTCCAGAGGGCCTGTGCTGTCTaGTTGAGTGCGGGCATCTTCTTGGCCCGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: IKEEEFQRACAV*LSAGIFLARST Trigger: TGTGGATCGGGCCAAGAAGATGCCCGCACTCAAGCAGACAGCACAGGCCCTCTGGAACTCCTCCTCCTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GCAGTTGATCAAGGAGGAGGAGTTCCAGAGGGCCTGTaGTGTTTGCTTGAGTGCGGGCATCTTCTTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVDQGGGVPEGL*CLLECGHLLGP Trigger: CGGGCCAAGAAGATGCCCGCACTCAAGCAAACAGCACAGGCCCTCTGGAACTCCTCCTCCTTGATCAACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GCAGTAAGCTGTCCTGGGAACCTTCATGCTCCCTGCTaGCAGGATTTCTACCCCAATCCAGTGGGGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVSCPGNLHAPC*QDFYPNPVGLA Trigger: TGCCAGCCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTTCCCAGGACAGCTTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CCA 72 bp | TGCCACTTGGGGAGGCTGGGATTCTCTGCAGAAGGTTaGCCAGATGCTAGGGATCGAGGTATCCATGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: CHLGRLGFSAEG*PDARDRGIHAR Trigger: TCGGGCATGGATACCTCGATCCCTAGCATCTGGCCAACCTTCTGCAGAGAATCCCAGCCTCCCCAAGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CACACGCGGATGCGGCAATCTGAGACCCCCATTCGCTaGGCCAGCTCCTTCCTCTCCTTGAAGCTCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: HTRMRQSETPIR*ASSFLSLKLRY Trigger: ATACCTGAGCTTCAAGGAGAGGAAGGAGCTGGCCAAGCGAATGGGGGTCTCAGATTGCCGCATCCGCGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | GATCAAGGAGGAGGAGTTCCAGAGGGCCTGTGCTGTTaGCTTGAGTGCGGGCATCTTCTTGGCCCGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DQGGGVPEGLCC*LECGHLLGPIH Trigger: GTGGATCGGGCCAAGAAGATGCCCGCACTCAAGCAAACAGCACAGGCCCTCTGGAACTCCTCCTCCTTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | AGGCCCCTGCTCCTCAAGTTGGACTTCGGTCAGCAGTaGATCAAGGAAGAGCTCCAGAGGGTCCGTGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPLLLKLDFGQQ*IKEELQRVRVP Trigger: GGGAACACGGACCCTCTGGAGCTCTTCCTTGATCAACTGCTGACCGAAGTCCAACTTGAGGAGCAGGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS TCA 72 bp | GGAGCAGGCTCTTCTACTTGGACTTCATCCAGCAGCTaGTCAAGGAGGGGTTCCAGAGAGCCTGCGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GAGSSTWTSSSS*SRRGSREPALP Trigger: AGGCAACGCAGGCTCTCTGGAACCCCTCCTTGATCAGCTGCTGGATGAAGTCCAAGTAGAAGAGCCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GTGGCCAAAAGCTCTTCTGGGAACCTTCATGCACCCTaGCACCAGGGTCTCCATCCAAATTCAGAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAKSSSGNLHAP*HQGLHPNSEGL Trigger: CAGCCCCTCTGAATTTGGATGGAGACCCTGGTGGCAGGGTGCATGAAGGTTCCCAGAAGAGCTTTTGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GCAGTAAGCTGTCCTGGGAACCTTCATGCTCCCTGCTaGCAGGATTTCTACCCCAATCCAGTGGGACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AVSCPGNLHAPC*QDFYPNPVGLA Trigger: TGCCAGTCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTTCCCAGGACAGCTTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TCCTCCAGGGGCAGTAAGCTGTCCTGGGAACCTTCATaGTCCCTGCTGCCAGGATTTCTACCCCAATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSRGSKLSWEPS*SLLPGFLPQSS Trigger: ACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCATGAAGGTTCCCAGGACAGCTTACTGCCCCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | GTGGCCAAAAGCTCTCCCACGAACCTTCATGCACCCTaGCACCAGGATCTACATCCCAATTCAGAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAKSSPTNLHAP*HQDLHPNSEGL Trigger: CAGCCCCTCTGAATTGGGATGTAGATCCTGGTGGCAGGGTGCATGAAGGTTCGTGGGAGAGCTTTTGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | ATCAAGGAGGAGGAGTTCCAGAGGGCCTGTGCTGTTTaGTTGAGTGCGGGCATCTTCTTGGCCCGATCCACA | + |
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Preference number: 6 (lower is better) Translates to: IKEEEFQRACAV*LSAGIFLARST Trigger: TGTGGATCGGGCCAAGAAGATGCCCGCACTCAAGCAAACAGCACAGGCCCTCTGGAACTCCTCCTCCTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | CGAGGTATCCATGCCCGTACTTCCTGCTTCTTCCTGTaGCAACAAGCTCTCCTGGGCACCTTCACGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RGIHARTSCFFL*QQALLGTFTLS Trigger: AGAGAGCGTGAAGGTGCCCAGGAGAGCTTGTTGCCACAGGAAGAAGCAGGAAGTACGGGCATGGATACCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | GCATCTTCTTGGCCCGATCCACAGGGCTGTGCCACTTaGGAAGTCTGGGACTCTCTGCAGAAGGAGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ASSWPDPQGCAT*EVWDSLQKEFE Trigger: CTCAAACTCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGGCACAGCCCTGTGGATCGGGCCAAGAAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | AGGGCTGTGCCACTTGGGAAGTCTGGGACTCTCTGCAGAAGGAGTTaGAGTCGCTGGGGCTTGAAGTATCCAGGCCTGTACTTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RAVPLGKSGTLCRRS*SRWGLKYPGLYFLL Trigger: AAGCAGGAAGTACAGGCCTGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGGCACAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS TCA 72 bp | GGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAGTTaGTCAAGGAGGAGGAGTTCCAGAGGGCCTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GTCSSFWTSSSS*SRRRSSRGPVL Trigger: CAGCACAGGCCCTCTGGAACTCCTCCTCCTTGATCAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | CACAGGGCTGTGCCACTTGGGAAGTCTGGGACTCTCTaGAGAAGGAGTTTGAGTCGCTGGGGCTTGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: HRAVPLGKSGTL*RRSLSRWGLKY Trigger: ATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGGCACAGCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | CCTGCTGCCAGGATTTCTACCCCAATCCAGTGGGACTaGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PAARISTPIQWD*HMLFLLDFVQQ Trigger: CTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGTCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | ATGCTCCCTGCTGCCAGGATTTCTACCCCAATCCAGTaGGGCTGGCACATGCTCTTCCTTTTGGACTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: MLPAARISTPIQ*GWHMLFLLDFV Trigger: GACGAAGTCCAAAAGGAAGAGCATGTGCCAGCCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CCACTTGGGAAGTCTGGGACTCTCTGCAGAAGGAGTTaGAGTCGCTGGGGCTTGAAGTATCCAGGCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLGKSGTLCRRS*SRWGLKYPGLY Trigger: GTACAGGCCTGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCCAGACTTCCCAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | ACCCCAATCCAGTGGGGCTGGCACATGCTCTTCCTTTaGGACTTCGTCCAGCAGTTGATCAAGGAGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TPIQWGWHMLFL*DFVQQLIKEEE Trigger: CTCCTCCTCCTTGATCAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGCCCCACTGGATTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CTCCACATTCACAGGGGAAGGCCCCTGCTCCTCAAGTaGGACTTCGGTCAGCAGTTGATCAAGGAAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LHIHRGRPLLLK*DFGQQLIKEEL Trigger: GAGCTCTTCCTTGATCAACTGCTGACCGAAGTCCAACTTGAGGAGCAGGGGCCTTCCCCTGTGAATGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS GCA 72 bp | CACAGGGCTGTGCCACTTGGGAAGGAAAGGACTCTCTaGAGAAGGAGTTTGAGTCGCTGGGGCTTGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: HRAVPLGKERTL*RRSLSRWGLKY Trigger: ATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCTTTCCTTCCCAAGTGGCACAGCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CCA 72 bp | ATGCTCCCTGCTGCCAGGATTTCTACCCCAATCCAGTaGGACTGGCACATGCTCTTCCTTTTGGACTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: MLPAARISTPIQ*DWHMLFLLDFV Trigger: GACGAAGTCCAAAAGGAAGAGCATGTGCCAGTCCCACTGGATTGGGGTAGAAATCCTGGCAGCAGGGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | TGGCACATGCTCTTCCTTTTGGACTTCGTCCAGCAGTaGATCAAGGAGGAGGAGTTCCAGAGGGCCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WHMLFLLDFVQQ*IKEEEFQRACA Trigger: AGCACAGGCCCTCTGGAACTCCTCCTCCTTGATCAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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| CDS CAA 72 bp | ACCCCAATCCAGTGGGACTGGCACATGCTCTTCCTTTaGGACTTCGTCCAGCAGTTGATCAAGGAGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TPIQWDWHMLFL*DFVQQLIKEEE Trigger: CTCCTCCTCCTTGATCAACTGCTGGACGAAGTCCAAAAGGAAGAGCATGTGCCAGTCCCACTGGATTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 90 bp | CGGCAATCTGAGACCCCCATTCGCTTGGCCAGCTCCTTCCTCTCCTaGAAGCTCAGGTATCTCTTCTCCTTAAAAGTTGATAGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RQSETPIRLASSFLS*KLRYLFSLKVDSRA Trigger: GGCCCTGCTATCAACTTTTAAGGAGAAGAGATACCTGAGCTTCAAGGAGAGGAAGGAGCTGGCCAAGCGAATGGGGGTCTCAGATTGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TCTTCCTGTGGCCAAAAGCTCTTCTGGGAACCTTCATaGACCCTGCCACCAGGGTCTCCATCCAAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSCGQKLFWEPS*TLPPGSPSKFR Trigger: TCTGAATTTGGATGGAGACCCTGGTGGCAGGGTGCATGAAGGTTCCCAGAAGAGCTTTTGGCCACAGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | TCTCTCTGTGGCCAAAAGCTCTCCCACGAACCTTCATaGACCCTGCCACCAGGATCTACATCCCAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLCGQKLSHEPS*TLPPGSTSQFR Trigger: TCTGAATTGGGATGTAGATCCTGGTGGCAGGGTGCATGAAGGTTCGTGGGAGAGCTTTTGGCCACAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | CCTGCCACCAGGATCTACATCCCAATTCAGAGGGGCTaGAGCATGCTCTTCTACTTGGACTTCATCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: PATRIYIPIQRG*SMLFYLDFIQQ Trigger: CTGTTGGATGAAGTCCAAGTAGAAGAGCATGCTCCAGCCCCTCTGAATTGGGATGTAGATCCTGGTGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | AAGTCTGGGACTCTCTGCAGAAGGAGTTTGAGTCGCTaGGGCTTGAAGTATCCAGGCCTGTACTTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KSGTLCRRSLSR*GLKYPGLYFLL Trigger: AAGCAGGAAGTACAGGCCTGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCCAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | CCACTTGGGAAGGAAAGGACTCTCTGCAGAAGGAGTTaGAGTCGCTGGGGCTTGAAGTATCCATGCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLGKERTLCRRS*SRWGLKYPCLY Trigger: GTACAGGCATGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCTTTCCTTCCCAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS GCA 72 bp | AGAAGGAGTTTGAGTCGCTGGGGCTTGAAGTATCCATaGCTGTACTTCCTGCTTCTTCCTGTGGCCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRSLSRWGLKYP*LYFLLLPVAKS Trigger: GCTTTTGGCCACAGGAAGAAGCAGGAAGTACAGGCATGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CCA 72 bp | AAGGAAAGGACTCTCTGCAGAAGGAGTTTGAGTCGCTaGGGCTTGAAGTATCCATGCCTGTACTTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KERTLCRRSLSR*GLKYPCLYFLL Trigger: AAGCAGGAAGTACAGGCATGGATACTTCAAGCCCCAGCGACTCAAACTCCTTCTGCAGAGAGTCCTTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS CAA 72 bp | GAGACCCCCATTCGCTTGGCCAGCTCCTTCCTCTCCTaGAAGCTCAGGTATCTCTTCTCCTTAAAAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETPIRLASSFLS*KLRYLFSLKVD Trigger: ATCAACTTTTAAGGAGAAGAGATACCTGAGCTTCAAGGAGAGGAAGGAGCTGGCCAAGCGAATGGGGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176875.4 |
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| CDS TCA 72 bp | AGAGCATATCTAGAAGAGTCTGATATTCTTCTGGAGTaGGAGGCAGATCAGGTGTTGTGTCCATTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RAYLEESDILLE*EADQVLCPFAP Trigger: GGGAGCAAATGGACACAACACCTGATCTGCCTCTCACTCCAGAAGAATATCAGACTCTTCTAGATATGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174056.4 ENSMUST00000176875.4 |
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