RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052861

Ensembl transcript IDs: ENSMUST00000064948.13, ENSMUST00000114040.8, ENSMUST00000204053.2

Found 898 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCGGCATCGGGACCTaGAGGCCTCGCCAACCGGGC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSGIGT*RPRQPG
Trigger: GCCCGGTTGGCGAGGCCTTCAGGTCCCGATGCCGGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATCCTCAAACACGGCTaGCAGGTTGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHILKHG*QVGPGP
Trigger: GGGCCCGGGCCCAACCTGTCAGCCGTGTTTGAGGAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACACGGCTGACAGGTTaGGCCCGGGCCCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTRLTG*ARARRS
Trigger: AGACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGCCGGGCCAGCTGGTaGGCCTCCGAGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESRASW*ASEVKL
Trigger: CAGCTTGACCTCGGAGGCGCACCAGCTGGCCCGGCT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGGTAGGAGGTGGGCGTaGTGTAGTAGCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHGRRWA*CSSACA
Trigger: TGCGCAGGCGCTACTACACCACGCCCACCTCCTACC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGCTCCAGGTAGGAGGTaGGCGTGGTGTAGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHAPGRR*AWCSSA
Trigger: GGCGCTACTACACCACGCCCACCTCCTACCTGGAGC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGTAGGAGGTGGGCGTaGTGTAGTAGCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGRRWA*CSSACA
Trigger: TGCGCAGGCGCTACTACACCACGCCCACCTCCTACC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGTCCTGGTACAGAGTaGCCAGGTCCACTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHCPGTE*PGPLEA
Trigger: CGCCTCCAGTGGACCTGGCCACTCTGTACCAGGACA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGAGCTGCAAGTCTCGTaGGGGACTGCTTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSELQVS*GTAFPC
Trigger: GCACGGGAAAGCAGTCCCTCACGAGACTTGCAGCTC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACGAGAACCACATCTaGATGGGCAGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHENHI*MGSQGA
Trigger: AGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTCGAGGGCGGGGAGTaGCTCCTCCAGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEFEGGE*LLQVSL
Trigger: CAGAGAGACCTGGAGGAGGCACTCCCCGCCCTCGAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGGTAGGAGGTaGGCGTGGTGTAGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEAPGRR*AWCSSA
Trigger: GGCGCTACTACACCACGCCCACCTCCTACCTGGAGC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAACCGGTCCACTTCCTaGCCAAGGACGGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHNRSTS*PRTVVR
Trigger: TCTGACCACCGTCCTTGGCCAGGAAGTGGACCGGTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAAGCATTTCCTTAGGTaGGGCTGCACGGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHKHFLR*GCTACG
Trigger: TCCGCAAGCCGTGCAGCCTCACCTAAGGAAATGCTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCGTTCCCCCTCAGGTaGCAGCATTGCCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPFPLR*QHCQDV
Trigger: GACATCTTGGCAATGCTGTCACCTGAGGGGGAACGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCATTGCCTCTTGCCTTaGGGCCTTTCCCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARHCLLP*GLSPGQ
Trigger: TTGGCCTGGGGAAAGGCCTCAAGGCAAGAGGCAATG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGCTGCAAAGCCCCCATaGGGCAAAGGTAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARAAKPP*GKGSSD
Trigger: ATCGCTGCTACCTTTGCCTCATGGGGGCTTTGCAGC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCACGAGAACCACATCTaGATGGGCAGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEHENHI*MGSQGA
Trigger: AGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTGGCAGAGCAACGCTaGCCCCTTGGAGATCCAGTA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLAEQR*PLGDPV
Trigger: TACTGGATCTCCAAGGGGTCAGCGTTGCTCTGCCAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTCCGAGGTCAAGCTaGAAAGCCCCCATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLPPRSS*KAPMRQ
Trigger: TTGCCTCATGGGGGCTTTGCAGCTTGACCTCGGAGG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCGGCAGTTCCGTTCTaGCTGCGTAGCCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPAVPF*LRSQDS
Trigger: TGAATCCTGGCTACGCAGGCAGAACGGAACTGCCGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGGTAAACTGTGGTCTTaGCACCTCCCGTTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHGKLWS*HLPLAL
Trigger: TAGGGCCAACGGGAGGTGGCAAGACCACAGTTTACC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGGACTGCTTTCCCGTaGCTCCTACACCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGTAFP*LLHQPA
Trigger: TGCTGGTTGGTGTAGGAGGCACGGGAAAGCAGTCCC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGGGACTGCTTTCCCGTaGCTCCTACACCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPGTAFP*LLHQPA
Trigger: TGCTGGTTGGTGTAGGAGGCACGGGAAAGCAGTCCC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGTCTCGTGAGGGACTaGTTTCCCGTGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSLVRD*FPVPPT
Trigger: TGTAGGAGGCACGGGAAAGCAGTCCCTCACGAGACT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGTCTCCAGAAGTCCTaGCTGAGTCGCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESLQKS*LSRSPE
Trigger: CTCCGGGCTGCGACTCAGCCAGGACTTCTGGAGACT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTGGTAATCAGCGATaGCAGCTTTGCACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLPGNQR*QLCTGG
Trigger: GCCGCCTGTGCAAAGCTGCCATCGCTGATTACCAGG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCTGGTAATCAGCGATaGCAGCTTTGCACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPGNQR*QLCTGG
Trigger: GCCGCCTGTGCAAAGCTGCCATCGCTGATTACCAGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGAGGAGGACCTTGGCTaGACCTCAAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPEEDLG*TSRMVV
Trigger: CACCACCATCCTTGAGGTCCAGCCAAGGTCCTCCTC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAGGAGGACCTTGGCTaGACCTCAAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSAREEDLG*TSRMVV
Trigger: CACCACCATCCTTGAGGTCCAGCCAAGGTCCTCCTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCCAGAGGAGGACCTTaGCTGGACCTCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPARGGP*LDLKDG
Trigger: ACCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCCAGAGGAGGACCTTaGCTGGACCTCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLARGGP*LDLKDG
Trigger: ACCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGATGGGGATCTTCGTaGGCTCTCTGTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHRWGSS*ALCGTG
Trigger: ACCTGTACCACAGAGAGCTCACGAAGATCCCCATCT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTGATATCCAAGATCTaGGGGTCCTGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSLISKI*GSCASS
Trigger: GCTGCTGGCACAGGACCCTCAGATCTTGGATATCAG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCTCCACCTTCTGTTTaGGCTGGGGCACCACACTGT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSPPSV*AGAPHC
Trigger: ACAGTGTGGTGCCCCAGCTCAAACAGAAGGTGGAGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCAGGCAGCTGCCTCTaGATGTCTGGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSAGSCL*MSGALK
Trigger: CTTTAATGCCCCAGACATTCAGAGGCAGCTGCCTGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAAGCATTTCCTTAGGTaGGGCTGCACGGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSKHFLR*GCTACG
Trigger: TCCGCAAGCCGTGCAGCCTCACCTAAGGAAATGCTT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATGGTCAGGATCACTTaGGAAGGGTGGCCAGCGATC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSMVRIT*EGWPAI
Trigger: GATCGCTGGCCACCCTTCTCAAGTGATCCTGACCAT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACTGTGCCAAGCCACTaGAGAAGCGCCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTVPSH*RSAPSS
Trigger: AGATGATGGGGCGCTTCTTCAGTGGCTTGGCACAGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACTGTGCCAAGCCACTaGAGAAGCGCCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTVPSH*RSAPSS
Trigger: AGATGATGGGGCGCTTCTTCAGTGGCTTGGCACAGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCCGTCCCTCAAACATaGATCTGGAGAGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPVPQT*IWRALR
Trigger: CCGCAAAGCTCTCCAGATTCATGTTTGAGGGACGGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGTCTCGCAACGCTCTaGTCAGGACCACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSLATL*SGPHLH
Trigger: GTGAAGATGTGGTCCTGATCAGAGCGTTGCGAGACT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCCTGTACTGGGCTGTaGAAGCCCCGTAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPACTGL*KPRNKP
Trigger: TGGCTTATTACGGGGCTTTCACAGCCCAGTACAGGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCCTGTACTGGGCTGTaGAAGCCCCGTAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLACTGL*KPRNKP
Trigger: TGGCTTATTACGGGGCTTTCACAGCCCAGTACAGGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCCTGGCAAACCTTTaGAAGGCGCCCATGGGATCA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSLANL*KAPMGS
Trigger: TGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAACTCTGGTCTGGATTaGAGCCACAAGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHNSGLD*SHKLLD
Trigger: GTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACTTCAGGAGATTGTTaGACCGGTCCACTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHTSGDC*TGPLPG
Trigger: GCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTCCAGCTTCACAGGCTaGTGTCTCTTTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSSFTG*CLFLVL
Trigger: GAGGACCAGAAAGAGACAGCAGCCTGTGAAGCTGGA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCACGGCTTGCGGATTaGGTGTCTGGGCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPARLAD*VSGPKS
Trigger: AGATTTTGGCCCAGACACGCAATCCGCAAGCCGTGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCCGGCAGTTCCGTTCTaGCTGCGTAGCCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEPAVPF*LRSQDS
Trigger: TGAATCCTGGCTACGCAGGCAGAACGGAACTGCCGG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGGTAAACTGTGGTCTTaGCACCTCCCGTTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSGKLWS*HLPLAL
Trigger: TAGGGCCAACGGGAGGTGGCAAGACCACAGTTTACC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATCTGCTTCAGACTGTaGTCCGAGGGCATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSICFRL*SEGIGR
Trigger: TCTCCCGATGCCCTCGGAGCACAGTCTGAAGCAGAT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCAGTGAGGAGGGTCTaGTGCAGGAGGATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSAVRRV*CRRIFR
Trigger: CCTGAAAATCCTCCTGCAGCAGACCCTCCTCACTGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCTGAAGGAACATCTTaGCTTCTGCAGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPEGTS*LLQAAA
Trigger: GGCAGCTGCCTGCAGAAGCCAAGATGTTCCTTCAGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTGAAGGAACATCTTaGCTTCTGCAGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLPEGTS*LLQAAA
Trigger: GGCAGCTGCCTGCAGAAGCCAAGATGTTCCTTCAGG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGCGGATTGCGTGTCTaGGCCAAAATCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARCGLRV*AKISRS
Trigger: GCTCCTGGAGATTTTGGCCCAGACACGCAATCCGCA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGGTGAAGACCTTTTCTaGCTCAGTATCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHGEDLF*LSIHAG
Trigger: CCCGGCATGGATACTGAGCCAGAAAAGGTCTTCACC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCTCCAGGTCTCTCTaGGCATCATCAGCGATCGCT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSSRSL*ASSAIA
Trigger: AGCGATCGCTGATGATGCCCAGAGAGACCTGGAGGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGTATCAGGCGCGCTTTaGTCAGGGCCATGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHVSGAL*SGPCSL
Trigger: CAAAGAACATGGCCCTGACCAAAGCGCGCCTGATAC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCAGAACCACATCTGAATaGGCAGCCAGGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLRTTSE*AARGLL
Trigger: CAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGAACCACATCTGAATaGGCAGCCAGGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARRTTSE*AARGLL
Trigger: CAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAGTGGCTTCAGGGATaGGTAGGCCGTGTTAGACCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARQWLQG*VGRVRP
Trigger: TGGTCTAACACGGCCTACCCATCCCTGAAGCCACTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGAACTACAGGCAGCATaGGGTTCATCTGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHELQAA*GSSVLA
Trigger: TGCCAGGACAGATGAACCCCATGCTGCCTGTAGTTC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAGATGGGGATCTTCGTaGGCTCTCTGTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPRWGSS*ALCGTG
Trigger: ACCTGTACCACAGAGAGCTCACGAAGATCCCCATCT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCTTTTCGACAGCCAGTaGTTTTCTTGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLFDSQ*FSWSAR
Trigger: ACGTGCGCTCCAAGAAAATCACTGGCTGTCGAAAAG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTATTTGTGCAGCCTTaGACTCCTGCAGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPLFVQP*TPAGCR
Trigger: CCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTATTTGTGCAGCCTTaGACTCCTGCAGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSLFVQP*TPAGCR
Trigger: CCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGGAGGTGTGGGCACCTaGTACTGTTCAATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPGGVGT*YCSMSL
Trigger: CAAGCTCATTGAACAGTATCAGGTGCCCACACCTCC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGAGGTGTGGGCACCTaGTACTGTTCAATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGGVGT*YCSMSL
Trigger: CAAGCTCATTGAACAGTATCAGGTGCCCACACCTCC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTCTCCACCTTCTGTTTaGGCTGGGGCACCACACTGT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESPPSV*AGAPHC
Trigger: ACAGTGTGGTGCCCCAGCTCAAACAGAAGGTGGAGA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACCCACATACCGGGATaGGGCAATGGTTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHTHIPG*GNGCNV
Trigger: AACATTGCAACCATTGCCTCATCCCGGTATGTGGGT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCCAAGATGTCGTTGGTaGAGACCTTTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHPRCRW*RPFLAQ
Trigger: CTGAGCCAGAAAAGGTCTTCACCAACGACATCTTGG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCATAAGGCATCCACTTaGGTTCTTCGGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARHKAST*VLRGPR
Trigger: TCGTGGACCCCGAAGAACTCAAGTGGATGCCTTATG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTCATCAGCGATCGCTTaGGTCTCTTCAGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSSAIA*VSSAFT
Trigger: GGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGTTCGAAGGCATCTCTaGTCCCAGGTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLVRRHL*SQVSVT
Trigger: AGTGACAGACACCTGGGATCAGAGATGCCTTCGAAC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAACTCTGGTCTGGATTaGAGCCACAAGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSNSGLD*SHKLLD
Trigger: GTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGTCCTTGAGGGTCCTTaGCAAAAAGGCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLVLEGP*QKGSRK
Trigger: CTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGAC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGAGTTCAGGCGTCCTTaGGGGTCCTTGACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPEFRRP*GSLTKR
Trigger: CCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGAGTTCAGGCGTCCTTaGGGGTCCTTGACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSEFRRP*GSLTKR
Trigger: CCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAAGGTCTTTGACCCATaGTCCCAGTGGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPKVFDP*SQWLQG
Trigger: TCCCTGAAGCCACTGGGATCATGGGTCAAAGACCTT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAAGGTCTTTGACCCATaGTCCCAGTGGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARKVFDP*SQWLQG
Trigger: TCCCTGAAGCCACTGGGATCATGGGTCAAAGACCTT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCCAGCTTCACAGGCTaGTGTCTCTTTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSSFTG*CLFLVL
Trigger: GAGGACCAGAAAGAGACAGCAGCCTGTGAAGCTGGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGGAGAGAACACATCTaGAGAGGGTCGATGGACCTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARRREHI*RGSMDL
Trigger: CAGGTCCATCGACCCTCTGCAGATGTGTTCTCTCCT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACATCAGGCTCCTCCTaGTTCAGGGCTTCTAGATCC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTSGSS*FRASRS
Trigger: GGATCTAGAAGCCCTGAAGCAGGAGGAGCCTGATGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGATCTGAGGGTCCTGTaGCAGCAGCTTGACTTCATT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHDLRVL*QQLDFI
Trigger: AATGAAGTCAAGCTGCTGGCACAGGACCCTCAGATC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGCTTCCCCAGAAGCCTaGCCAGATATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHASPEA*PDMSWI
Trigger: AATCCAAGACATATCTGGGCAGGCTTCTGGGGAAGC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGAACATCTTGGCTTCTaGAGGCAGCTGCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHEHLGF*RQLPLN
Trigger: ATTCAGAGGCAGCTGCCTGCAGAAGCCAAGATGTTC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATTCCACATTGCCTCTTaGCTTGAGGCCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPFHIAS*LEAFPQ
Trigger: CTGGGGAAAGGCCTCAAGGCAAGAGGCAATGTGGAA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTCCACATTGCCTCTTaGCTTGAGGCCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSFHIAS*LEAFPQ
Trigger: CTGGGGAAAGGCCTCAAGGCAAGAGGCAATGTGGAA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCTTCTCCATCCCTaGAGAACCTCGGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLLLHP*RTSEEE
Trigger: TTCTTCCTCCGAGGTTCTGCAGGGATGGAGAAGGAG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGCTCGCCTGATATTTaGACGCAAGCCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGSPDI*TQAFWR
Trigger: CCTCCAAAAGGCTTGCGTGCAAATATCAGGCGAGCC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTTCATCATTGCTTTTaGCCTGGCCGCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSFHHCF*PGRQRR
Trigger: CCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTTCATCATTGCTTTTaGCCTGGCCGCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLFHHCF*PGRQRR
Trigger: CCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGGGAACTGAAGAATTaGACATCAGGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHWELKN*TSGSSC
Trigger: GCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCCGGGCTTTCAGGGTTaGGTTCCTCAAGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHPGFQG*VPQVND
Trigger: ATCATTGACTTGAGGAACCCAACCCTGAAAGCCCGG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGGTGAAGACCTTTTCTaGCTCAGTATCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSGEDLF*LSIHAG
Trigger: CCCGGCATGGATACTGAGCCAGAAAAGGTCTTCACC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCACCCACTCTGTCCTaGGTTTCCCCTGGTAATCAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSPTLS*VSPGNQ
Trigger: CTGATTACCAGGGGAAACCCAGGACAGAGTGGGTGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCAGACCACACACTGGATaGCGAGGGCTTTTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLRPHTG*RGLLLG
Trigger: ACCTAGCAAAAGCCCTCGCCATCCAGTGTGTGGTCT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGACCACACACTGGATaGCGAGGGCTTTTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSRPHTG*RGLLLG
Trigger: ACCTAGCAAAAGCCCTCGCCATCCAGTGTGTGGTCT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTGAAGACCACACACTaGATGGCGAGGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLKTTH*MARAFA
Trigger: AGCAAAAGCCCTCGCCATCCAGTGTGTGGTCTTCAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATAATGGGACTTGGCTaGGGTTGGCAGGAGATCGAC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSIMGLG*GWQEID
Trigger: GTCGATCTCCTGCCAACCCCAGCCAAGTCCCATTAT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATAATGGGACTTGGCTaGGGTTGGCAGGAGATCGAC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLIMGLG*GWQEID
Trigger: GTCGATCTCCTGCCAACCCCAGCCAAGTCCCATTAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTCCTCCAGGTCTCTCTaGGCATCATCAGCGATCGCT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESSRSL*ASSAIA
Trigger: AGCGATCGCTGATGATGCCCAGAGAGACCTGGAGGA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAATCCAGTGCTTTATTaGCAGCTTCGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSNPVLY*QLRGRG
Trigger: TCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAAGTTGCTTTGCTGTTaGCCAGTCGGGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHKLLCC*PVGLGI
Trigger: AATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAACTACAGGCAGCATaGGGTTCATCTGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARELQAA*GSSVLA
Trigger: TGCCAGGACAGATGAACCCCATGCTGCCTGTAGTTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGTCAGCCGTGCTTGGTaGTGGCTTAAGAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPVSRAW*WLKNSR
Trigger: TCTGGAATTCTTAAGCCATCACCAAGCACGGCTGAC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGAGACTAATGATTaGAGCTCTGTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLETND*SSVSRA
Trigger: AGCACGGCTGACAGAGCTTCAATCATTAGTCTCGAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTTTCGACAGCCAGTaGTTTTCTTGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLFDSQ*FSWSAR
Trigger: ACGTGCGCTCCAAGAAAATCACTGGCTGTCGAAAAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCTGTGCCAGCAGCTTaGCTTCATTCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPVPAA*LHSPHC
Trigger: ACAATGAGGTGAATGAAGTCAAGCTGCTGGCACAGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCACGGTGAGGAAGGATaGCAAATTCCGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARHGEEG*QIPWFS
Trigger: GGAAAACCACGGAATTTGTCATCCTTCCTCACCGTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACGGTGAGGAAGGATaGCAAATTCCGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHGEEG*QIPWFS
Trigger: GGAAAACCACGGAATTTGTCATCCTTCCTCACCGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACCCACATACCGGGATaGGGCAATGGTTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTHIPG*GNGCNV
Trigger: AACATTGCAACCATTGCCTCATCCCGGTATGTGGGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCCAAGATGTCGTTGGTaGAGACCTTTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSPRCRW*RPFLAQ
Trigger: CTGAGCCAGAAAAGGTCTTCACCAACGACATCTTGG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCTATGTCAATCCGGTTaGATTCGTCAAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLCQSG*IRQSST
Trigger: GGTGCTGCTTTGACGAATTCAACCGGATTGACATAG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGTCTCGCAACGCTCTaGTCAGGACCACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESLATL*SGPHLH
Trigger: GTGAAGATGTGGTCCTGATCAGAGCGTTGCGAGACT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCGCAAGCTGCTGCTATaGACACGTTTCCAACGATGT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARRKLLL*TRFQRC
Trigger: ACATCGTTGGAAACGTGTTCATAGCAGCAGCTTGCG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCGCAAGCTGCTGCTATaGACACGTTTCCAACGATGT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSRKLLL*TRFQRC
Trigger: ACATCGTTGGAAACGTGTTCATAGCAGCAGCTTGCG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCCGGAAAGTGTCCTTaGTTGTCTGATTTGGATCCG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPAGKCP*LSDLDP
Trigger: CGGATCCAAATCAGACAATCAAGGACACTTTCCGGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCCGGAAAGTGTCCTTaGTTGTCTGATTTGGATCCG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSAGKCP*LSDLDP
Trigger: CGGATCCAAATCAGACAATCAAGGACACTTTCCGGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCTCAAGGATGGTGGTaGTCAGAGTGTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPQGWW*SECWSL
Trigger: AAGAGACCAACACTCTGATCACCACCATCCTTGAGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAGTCGCACTATTTGTaGAGCCTTGAACTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARQSHYL*SLELLQ
Trigger: CTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGTCGCACTATTTGTaGAGCCTTGAACTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLQSHYL*SLELLQ
Trigger: CTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGACTCATCTTCTTCTTaGTTTTCCATCAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHDSSSS*FSISGA
Trigger: GGCCCCACTGATGGAAAAGCAAGAAGAAGATGAGTC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGATCTGAGGGTCCTGTaGCAGCAGCTTGACTTCATT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSDLRVL*QQLDFI
Trigger: AATGAAGTCAAGCTGCTGGCACAGGACCCTCAGATC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGGCTCAGTATCCATaGCGGGTATTTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPLAQYP*RVFSLL
Trigger: CAGAAGGGAAAATACCCGGCATGGATACTGAGCCAG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATGGCCTGGAATATCTaGTTCAGACTGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLMAWNI*FRLCSE
Trigger: CTCGGAGCACAGTCTGAAGCAGATATTCCAGGCCAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGATTCCAACTTCCTTTaGTTTTGGTCGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLDSNFL*FWSGGC
Trigger: GCAGCCACCCGACCAAAAGCAAAGGAAGTTGGAATC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGATTCCAACTTCCTTTaGTTTTGGTCGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSDSNFL*FWSGGC
Trigger: GCAGCCACCCGACCAAAAGCAAAGGAAGTTGGAATC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACCAAGAAGTTGCTTTaGTGTTGGCCAGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTKKLL*CWPVGL
Trigger: AAGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGCCACGCAAGCTGCTaGTATGAACACGTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSHASC*YEHVSN
Trigger: GTTGGAAACGTGTTCATAGCAGCAGCTTGCGTGGCT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATAAGCCACGCAAGCTaGTGCTATGAACACGTTTCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHISHAS*CYEHVS
Trigger: GGAAACGTGTTCATAGCAGCAGCTTGCGTGGCTTAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGATCAGCTCTTCCATTaGCAGCATCCAAGAAACGGC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLDQLFH*QHPRNG
Trigger: GCCGTTTCTTGGATGCTGGCAATGGAAGAGCTGATC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGGACAATTTCATCATTaGTTTTGCCCTGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLGQFHH*FCPGRQ
Trigger: CTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGAAGCACCCTCCATCTaGAGAGATTCTGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSEAPSI*RDSGTL
Trigger: CAGAGTTCCAGAATCTCTGCAGATGGAGGGTGCTTC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCAGTCTTCGGGAGGTGTaGGCACCTGATACTGTTCAA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSLREV*APDTVQ
Trigger: TTGAACAGTATCAGGTGCCCACACCTCCCGAAGACT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGTCTTCGGGAGGTGTaGGCACCTGATACTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSLREV*APDTVQ
Trigger: TTGAACAGTATCAGGTGCCCACACCTCCCGAAGACT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACCTTCTGTTTGAGCTaGGGCACCACACTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTFCLS*GTTLLG
Trigger: ACCTAACAGTGTGGTGCCCCAGCTCAAACAGAAGGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACCTTCTGTTTGAGCTaGGGCACCACACTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTFCLS*GTTLLG
Trigger: ACCTAACAGTGTGGTGCCCCAGCTCAAACAGAAGGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCGGGCTTTCAGGGTTaGGTTCCTCAAGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLPGFQG*VPQVND
Trigger: ATCATTGACTTGAGGAACCCAACCCTGAAAGCCCGG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTGAAGACCACACACTaGATGGCGAGGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLKTTH*MARAFA
Trigger: AGCAAAAGCCCTCGCCATCCAGTGTGTGGTCTTCAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTGCTTTACTGCTTCTaGGAAGTCAGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLLYCF*EVSQEA
Trigger: GGCTTCCTGGCTGACTTCCCAGAAGCAGTAAAGCAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCAGACATAATGGGACTTaGCTGGGGTTGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLRHNGT*LGLAGD
Trigger: ATCTCCTGCCAACCCCAGCCAAGTCCCATTATGTCT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGGATTTGCAGGCCTTaGACACCTTCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARWICRP*TPSPPS
Trigger: AGAAGGTGGAGAAGGTGTCCAAGGCCTGCAAATCCA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAGAGTACAGATCCATaGCTCTCACCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARESTDP*LSPTCT
Trigger: TGTGCATGTGGGTGAGAGCCATGGATCTGTACTCTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATCCTCACGATTAGCTaGATCCTCTGTTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHILTIS*ILCSSN
Trigger: GTTGGAGGAACAGAGGATCCAGCTAATCGTGAGGAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTTGAAAGGCGCCCATaGGATCAGAGCCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEFERRP*DQSLCS
Trigger: TGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCTGGAACTCTGGTCTaGATTGAAGCCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSGTLV*IEATSS
Trigger: GGAGCTTGTGGCTTCAATCCAGACCAGAGTTCCAGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGGTTGAATGGCCTGTaGTTGAAAGTGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARWLNGL*LKVFLP
Trigger: GGGCAGGAACACTTTCAACCACAGGCCATTCAACCA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGTACGTCGGATAAGTTaGAGACCTCATTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHVRRIS*RPHSKE
Trigger: CTCTTTGGAATGAGGTCTTCAACTTATCCGACGTAC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATTTCCAGCTGGGAACTaGAGAATTGGACATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPFPAGN*RIGHQA
Trigger: AGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTTCCAGCTGGGAACTaGAGAATTGGACATCAGGCT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARFPAGN*RIGHQA
Trigger: AGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTGCATCTTGTGCCTCTaGGATGATAGCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSCILCL*DDSIHL
Trigger: AAGGTGGATGCTATCATCTCAGAGGCACAAGATGCA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCCTTAGAGTCACGGTaGGGAAGGATGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSLESR*GRMTNS
Trigger: GGAATTTGTCATCCTTCCTCACCGTGACTCTAAGGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGACCACATCTTCACTaGGGTCTGGGTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGPHLH*GLGSLF
Trigger: AAAGAGAGAACCCAGACCTCAGTGAAGATGTGGTCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCACTGGCCCATCGCTaGTTATCCATTTATGGTCTT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPLAHR*LSIYGL
Trigger: AAGACCATAAATGGATAATCAGCGATGGGCCAGTGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCCACTGGCCCATCGCTaGTTATCCATTTATGGTCTT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSPLAHR*LSIYGL
Trigger: AAGACCATAAATGGATAATCAGCGATGGGCCAGTGG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTATTTCCATCTTTGCTaGGCAGCAGAGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARYFHLC*AAETPA
Trigger: TGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATGGAGGTGCACATGCTaGCACAATTGTTACATCCTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPWRCTC*HNCYIL
Trigger: CAGGATGTAACAATTGTGTCAGCATGTGCACCTCCA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCTCTCGAGCTATGTTaGTCATCAGCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSLELC*SSALWT
Trigger: AGTCCACAGAGCTGATGATCAACATAGCTCGAGAGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTGTCCCAGAGAAATTaGCTGCACTCGTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLSQRN*LHSFCI
Trigger: TATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTGAATGTCCTTGGCTaGTTCTATCACTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLNVLG*FYHCSL
Trigger: CAAGCTGCAGTGATAGAATCAGCCAAGGACATTCAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGACTTCAGCCATTCCTaGTGGAGATTATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPDFSHS*WRLSHS
Trigger: GGAATGGGATAATCTCCAGCAGGAATGGCTGAAGTC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGACTTCAGCCATTCCTaGTGGAGATTATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARDFSHS*WRLSHS
Trigger: GGAATGGGATAATCTCCAGCAGGAATGGCTGAAGTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTCCCCAGAAGCCTaGCCAGATATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEASPEA*PDMSWI
Trigger: AATCCAAGACATATCTGGGCAGGCTTCTGGGGAAGC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAACATCTTGGCTTCTaGAGGCAGCTGCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEEHLGF*RQLPLN
Trigger: ATTCAGAGGCAGCTGCCTGCAGAAGCCAAGATGTTC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACCACATATATGAGCTaGAAGTCTCGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTTYMS*KSREGL
Trigger: CAGTCCCTCACGAGACTTGCAGCTCATATATGTGGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACCACATATATGAGCTaGAAGTCTCGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTTYMS*KSREGL
Trigger: CAGTCCCTCACGAGACTTGCAGCTCATATATGTGGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACATGCACATGGATTTaGAGGCCTTGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTCTWI*RPWTPS
Trigger: AGAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACTCTATAAGCAGCTaGCTGTACTGGGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHSISS*LYWAVK
Trigger: TTTCACAGCCCAGTACAGGCAGCTGCTTATAGAGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCACTCTATAAGCAGCTaGCTGTACTGGGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARHSISS*LYWAVK
Trigger: TTTCACAGCCCAGTACAGGCAGCTGCTTATAGAGTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCCACTCATGAACGTCTaGTTTAAAAGGATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHPLMNV*FKRMGS
Trigger: GGAACCCATCCTTTTAAAGCAGACGTTCATGAGTGG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCTGCTGTCTCTTTCTaGTCCTCTCTTGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLAAVSF*SSLELL
Trigger: CAAAAGCTCAAGAGAGGACCAGAAAGAGACAGCAGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCTGCAGAGGGTCGATaGACCTGTTTCCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSAEGR*TCFLFT
Trigger: TGTGAAAAGGAAACAGGTCCATCGACCCTCTGCAGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCTGCAGAGGGTCGATaGACCTGTTTCCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSAEGR*TCFLFT
Trigger: TGTGAAAAGGAAACAGGTCCATCGACCCTCTGCAGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCAGTAATCCACTTCTaGATGACGTCTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSVIHF*MTSAEG
Trigger: TCCCTCAGCAGACGTCATCCAGAAGTGGATTACTGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTCAGTAATCCACTTCTaGATGACGTCTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSVIHF*MTSAEG
Trigger: TCCCTCAGCAGACGTCATCCAGAAGTGGATTACTGA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTACACGGCTGACAGGTTaGGCCCGGGCCCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPTRLTG*ARARRS
Trigger: AGACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTGGGAACTGAAGAATTaGACATCAGGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEWELKN*TSGSSC
Trigger: GCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGACATAATGGGACTTaGCTGGGGTTGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGERHNGT*LGLAGD
Trigger: ATCTCCTGCCAACCCCAGCCAAGTCCCATTATGTCT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCTGCTTTAAAAGGATaGGTTCCAGGGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSALKG*VPGLDP
Trigger: TGGATCCAGCCCTGGAACCCATCCTTTTAAAGCAGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCTAAGCCCCAAACATaGTCCTTCTCCTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSKPQT*SFSSSC
Trigger: ACACGAAGAGGAGAAGGACCATGTTTGGGGCTTAGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATGTGGAACAAGGCATaGAGCTTAGAAAAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHMWNKA*SLEKAG
Trigger: TCCGGCTTTTTCTAAGCTCCATGCCTTGTTCCACAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTGCACGCAAGCCTTTTaGAGGCTCATTGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLCTQAF*RLIGYL
Trigger: AAGGTAACCAATGAGCCTCCAAAAGGCTTGCGTGCA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGCAACTCCTTGTCCATaGGCAGTTCTGTTCCAAATT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHATPCP*AVLFQI
Trigger: AATTTGGAACAGAACTGCCCATGGACAAGGAGTTGC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCCTGTTTTGTAGAGTaGGGAGTGGTAGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSCFVE*GVVECV
Trigger: CACACACTCTACCACTCCCCACTCTACAAAACAGGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGAATTCCAGAGCTCATaGGCTTCTGTCGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLEFQSS*ASVDSV
Trigger: AACAGAATCGACAGAAGCTCATGAGCTCTGGAATTC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTACGTCGGATAAGTTaGAGACCTCATTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSVRRIS*RPHSKE
Trigger: CTCTTTGGAATGAGGTCTTCAACTTATCCGACGTAC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATGACTTATCCACCTaGAGGAACATCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSHDLST*RNILAS
Trigger: AGAAGCCAAGATGTTCCTTCAGGTGGATAAGTCATG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATGACTTATCCACCTaGAGGAACATCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLHDLST*RNILAS
Trigger: AGAAGCCAAGATGTTCCTTCAGGTGGATAAGTCATG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCCTCCAGACATTTCTaGATTTGGTCAAGTAATGCG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSASRHF*IWSSNA
Trigger: CGCATTACTTGACCAAATTCAGAAATGTCTGGAGGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGCAAACTCGAGCTTTaGAATGGAGTCGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGKLEL*NGVEAF
Trigger: AAATGCTTCGACTCCATTTCAAAGCTCGAGTTTGCC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAAGGATTGTCTGTGTTaGGCTTTTCGAGGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSKDCLC*AFRGSL
Trigger: TAGGGAACCTCGAAAAGCTCAACACAGACAATCCTT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTATTTCCATCTTTGCTaGGCAGCAGAGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEYFHLC*AAETPA
Trigger: TGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCAGTTTTGACTCAATaGTCTCCTGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPVLTQ*SPVSLK
Trigger: CTTCAAGGACACAGGAGATCATTGAGTCAAAACTGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAATCCACCAAAATCTTaGTACTGCCGAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHNPPKS*YCRSSS
Trigger: TGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCCGGCATCGGGACCTaGAGGCCTCGCCAACCGGGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSGIGT*RPRQPG
Trigger: GCCCGGTTGGCGAGGCCTTCAGGTCCCGATGCCGGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTGTTGATGTACTTCTaGAGCTTCAACAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLLMYF*SFNRIC
Trigger: GCAGATCCTGTTGAAGCTTCAGAAGTACATCAACAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCTTATGGAAAGAGCTaGAGTCTAAGCCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLAYGKS*SLSPKH
Trigger: ATGTTTGGGGCTTAGACTTCAGCTCTTTCCATAAGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGCTTATGGAAAGAGCTaGAGTCTAAGCCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARAYGKS*SLSPKH
Trigger: ATGTTTGGGGCTTAGACTTCAGCTCTTTCCATAAGC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCTCATTGGTTACCTTaGCAGAATTCTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLAHWLP*QNSEGL
Trigger: CAGTCCTTCAGAATTCTGTCAAGGTAACCAATGAGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTGACAGTAAAGGTTaGGGTTCAGTAAGGCACATT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLRDSKG*GSVRHI
Trigger: AATGTGCCTTACTGAACCTCAACCTTTACTGTCACG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTGAATGTCCTTGGCTaGTTCTATCACTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLNVLG*FYHCSL
Trigger: CAAGCTGCAGTGATAGAATCAGCCAAGGACATTCAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACTCATCTTCTTCTTaGTTTTCCATCAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEDSSSS*FSISGA
Trigger: GGCCCCACTGATGGAAAAGCAAGAAGAAGATGAGTC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATCCACCTTTTTCTTaGTCAAACAGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLHPPFS*SNREAW
Trigger: CCATGCTTCCCTGTTTGAGCAAGAAAAAGGTGGATG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATGCAGAGAACTATGTaGAGCTTCTGTCGTACTCTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPMQRTM*SFCRTL
Trigger: CAGAGTACGACAGAAGCTGCACATAGTTCTCTGCAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGATGCAGAGAACTATGTaGAGCTTCTGTCGTACTCTG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARMQRTM*SFCRTL
Trigger: CAGAGTACGACAGAAGCTGCACATAGTTCTCTGCAT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGTGCTGAAACTAACTaGTTCCTTTTCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPRAETN*FLFSVS
Trigger: GCTCACTGAGAAAAGGAAGCAGTTAGTTTCAGCACG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGCTTCAACAGGATCTaGGGCTTTATGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSFNRI*GFMFSL
Trigger: TAAGGAGAACATAAAGCCGCAGATCCTGTTGAAGCT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGACATGCACATGGATTTaGAGGCCTTGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGETCTWI*RPWTPS
Trigger: AGAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGCTTCAGCAATGCTTaGTTTTCTTTCAGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARCFSNA*FSFRVA
Trigger: GGCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAGGGGGCAAAATAGATaGCTGAGTCAGAGTATGTGT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPRGQNR*LSQSMC
Trigger: ACACATACTCTGACTCAGGCATCTATTTTGCCCCCT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCCTAAATACCAGGGTTaGAGGTTCAGGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHPKYQG*RFRFIF
Trigger: GAAAATGAACCTGAACCTCCAACCCTGGTATTTAGG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAATGATGCCTTTTGCTaGCCTGTTCTGTGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARNDAFC*PVLCRS
Trigger: TGACCTACACAGAACAGGCCAGCAAAAGGCATCATT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAATGATGCCTTTTGCTaGCCTGTTCTGTGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPNDAFC*PVLCRS
Trigger: TGACCTACACAGAACAGGCCAGCAAAAGGCATCATT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAAGCCCTTTTCCAGCTaGGTCACAAATTTAGCGTAT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHKPFSS*VTNLAY
Trigger: ATACGCTAAATTTGTGACCCAGCTGGAAAAGGGCTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCTGCCTCTGAATGTCTaGGGCATTAAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSLPLNV*GIKDAF
Trigger: GAAAGCATCTTTAATGCCCCAGACATTCAGAGGCAG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACCTGTGGGATAGCTTaGGTGCACTTTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSTCGIA*VHFLFT
Trigger: TGTGAACAAAAAGTGCACCCAAGCTATCCCACAGGT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACCTGTGGGATAGCTTaGGTGCACTTTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTCGIA*VHFLFT
Trigger: TGTGAACAAAAAGTGCACCCAAGCTATCCCACAGGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGAACACAAAAGTCTaGCACAGTACAGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPQNTKV*HSTVFS
Trigger: GCTGAACACTGTACTGTGCCAGACTTTTGTGTTCTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGGGGTCCAGGCGTTTaGTGTCAAAGTCTATATGAA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSRGPGV*CQSLYE
Trigger: TTCATATAGACTTTGACACCAAACGCCTGGACCCCT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTGGCATTTAAGAGGATaGAGATGGCTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLWHLRG*RWLPSQ
Trigger: CTGTGATGGAAGCCATCTCCATCCTCTTAAATGCCA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTGATATCAAGTCTCTaGGCAGTCCATCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSLISSL*AVHLCS
Trigger: GGAACACAGATGGACTGCCCAGAGACTTGATATCAA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCTTCCCAGACCGGTaGGTTAATATAGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSFPDR*VNIGLK
Trigger: TTTGAGACCTATATTAACCCACCGGTCTGGGAAGGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAAGAAACGGCAAGATaGCAGTTCTGCAGAAATACC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARQETAR*QFCRNT
Trigger: GGTATTTCTGCAGAACTGCCATCTTGCCGTTTCTTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGATGTGGAACAAGGCATaGAGCTTAGAAAAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARMWNKA*SLEKAG
Trigger: TCCGGCTTTTTCTAAGCTCCATGCCTTGTTCCACAT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGTCACAGGAAATGTaGAACAAGGCATGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPLSQEM*NKAWSL
Trigger: TAAGCTCCATGCCTTGTTCCACATTTCCTGTGACAG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGAAGCCACAAGCTCCTaGACAATTTCATCATTGCTT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHEATSS*TISSLL
Trigger: AAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGTAGAGTGTGTGGACTaGCTCATAGTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHVECVD*LIVLFW
Trigger: CCAAAACAAAACTATGAGCCAGTCCACACACTCTAC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCAGTCACCACAAAGTTaGTTGAATGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEQSPQS*LNGLWL
Trigger: CAACCACAGGCCATTCAACCAACTTTGTGGTGACTG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTTCTGGTCCTCTCTTaGGCTTTTGTGGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEFLVLS*AFVVCL
Trigger: TAGGCATACCACAAAAGCTCAAGAGAGGACCAGAAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACCAGATTAGGAACTaGCAACACCGTGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLHQIRN*QHRVFK
Trigger: TTTGAAAACACGGTGTTGTCAGTTCCTAATCTGGTG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACCAGATTAGGAACTaGCAACACCGTGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHQIRN*QHRVFK
Trigger: TTTGAAAACACGGTGTTGTCAGTTCCTAATCTGGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATGGACACTTCCACCTTaGAATTCTTCTGGTAGGATT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPWTLPP*NSSGRI
Trigger: AATCCTACCAGAAGAATTTCAAGGTGGAAGTGTCCA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCTCCAGACATTTCTaGATTTGGTCAAGTAATGCG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEASRHF*IWSSNA
Trigger: CGCATTACTTGACCAAATTCAGAAATGTCTGGAGGC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCTGTATCACCTTTTTaGCCATACATAACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPAVSPF*PYITQA
Trigger: AGCCTGAGTTATGTATGGTCAAAAAGGTGATACAGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCTGTATCACCTTTTTaGCCATACATAACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLAVSPF*PYITQA
Trigger: AGCCTGAGTTATGTATGGTCAAAAAGGTGATACAGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCCATTTATGGTCTTCTaGAGTATCGTTCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEPFMVF*SIVHSC
Trigger: GCAGCTGTGAACGATACTTCAGAAGACCATAAATGG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAAAAGCATGTGGATCTaGGGTGTGAGTTTAATCCTT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHKSMWI*GVSLIL
Trigger: AAGGATTAAACTCACACCTCAGATCCACATGCTTTT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCCATTCCACATCGGCTaGCCGTGGCAGGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPPFHIG*PWQERP
Trigger: TGGCCTCTCCTGCCACGGTCAGCCGATGTGGAATGG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTTCGTTCCAGTTTTaGCTCAATGATCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLSFQF*LNDLLC
Trigger: ACACAGGAGATCATTGAGTCAAAACTGGAACGAAAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGTTTGTCTTCATTATTaGTCAGGCGGTCATGGAACA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPVCLHY*SGGHGT
Trigger: TGTTCCATGACCGCCTGATCAATAATGAAGACAAAC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCGATCTGGGTGTCTGTaGAAAGGAAAACCATATCTT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSRSGCL*KGKPYL
Trigger: AAGATATGGTTTTCCTTTTCACAGACACCCAGATCG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTTCTAGTAGCTTGGTaGGACCATTCTTTACACGAT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHFLVAW*DHSLHD
Trigger: ATCGTGTAAAGAATGGTCTCACCAAGCTACTAGAAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTATTTCAGTGAATACTaGTACATGGGGTCGATTTCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHYFSEY*YMGSIS
Trigger: GGAAATCGACCCCATGTATCAGTATTCACTGAAATA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCGTGACAGTAAAGGTTaGGGTTCAGTAAGGCACATT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGERDSKG*GSVRHI
Trigger: AATGTGCCTTACTGAACCTCAACCTTTACTGTCACG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGGCAAAATAGATGCCTaGGTCAGAGTATGTGTAATC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSGKIDA*VRVCVI
Trigger: GATTACACATACTCTGACTCAGGCATCTATTTTGCC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCCATGAACATTCCATaGACAAGAACCCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSMNIP*TRTPSS
Trigger: TGAAGATGGGGTTCTTGTTCATGGAATGTTCATGGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTCCATGAACATTCCATaGACAAGAACCCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSMNIP*TRTPSS
Trigger: TGAAGATGGGGTTCTTGTTCATGGAATGTTCATGGA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACCGAGAAGCATCCATaGACATTCCATGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTEKHP*TFHEQE
Trigger: TTCTTGTTCATGGAATGTTCATGGATGCTTCTCGGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACCGAGAAGCATCCATaGACATTCCATGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTEKHP*TFHEQE
Trigger: TTCTTGTTCATGGAATGTTCATGGATGCTTCTCGGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCTACCGAGTCCTTGTaGTGTTTATGGTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSATESL*CLWYFS
Trigger: GGAAAAATACCATAAACAGCACAAGGACTCGGTAGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGCTACCGAGTCCTTGTaGTGTTTATGGTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARATESL*CLWYFS
Trigger: GGAAAAATACCATAAACAGCACAAGGACTCGGTAGC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCATCCACCTTTTTCTTaGTCAAACAGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEHPPFS*SNREAW
Trigger: CCATGCTTCCCTGTTTGAGCAAGAAAAAGGTGGATG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCAGCGATGGCAGCTTTaGACAGGCGGCGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPQRWQL*TGGGET
Trigger: CGTCTCTCCGCCGCCTGTGCAAAGCTGCCATCGCTG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAGCCGGGCCAGCTGGTaGGCCTCCGAGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSRASW*ASEVKL
Trigger: CAGCTTGACCTCGGAGGCGCACCAGCTGGCCCGGCT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATTCAGCAATCCTTTTaGAATAACGGACTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHIQQSF*NNGLAN
Trigger: GTTGGCAAGTCCGTTATTGCAAAAGGATTGCTGAAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATTGCAATTCCAAAGTaGTTGTTGGCCATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHIAIPK*LLAISV
Trigger: GACAGAAATGGCCAACAAGCACTTTGGAATTGCAAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGCTTCAACAGGATCTaGGGCTTTATGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSFNRI*GFMFSL
Trigger: TAAGGAGAACATAAAGCCGCAGATCCTGTTGAAGCT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATTTTCAGGCGTTCATaGAGGTTGTCACTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPIFRRS*RLSLFS
Trigger: TGAGAAGAGTGACAACCTGCATGAACGCCTGAAAAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATTTTCAGGCGTTCATaGAGGTTGTCACTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSIFRRS*RLSLFS
Trigger: TGAGAAGAGTGACAACCTGCATGAACGCCTGAAAAT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCTAAATACCAGGGTTaGAGGTTCAGGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPKYQG*RFRFIF
Trigger: GAAAATGAACCTGAACCTCCAACCCTGGTATTTAGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTTTCACAGCTTCTTaGGCCTCGAGACTAATGATT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLFTAS*ASRLMI
Trigger: AATCATTAGTCTCGAGGCCCAAGAAGCTGTGAAAAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGATTCTATGGAAGACTTaGGTACGGCAGAGATCATGT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARILWKT*VRQRSC
Trigger: ACATGATCTCTGCCGTACCCAAGTCTTCCATAGAAT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAAGCCCTTTTCCAGCTaGGTCACAAATTTAGCGTAT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARKPFSS*VTNLAY
Trigger: ATACGCTAAATTTGTGACCCAGCTGGAAAAGGGCTT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACCATAGTCATGTTCTaGGATTTGGACTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTIVMF*DLDSRK
Trigger: TTTCCTGGAGTCCAAATCCCAGAACATGACTATGGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACCATAGTCATGTTCTaGGATTTGGACTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSTIVMF*DLDSRK
Trigger: TTTCCTGGAGTCCAAATCCCAGAACATGACTATGGT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAAGCATCTCAAAGAATaGGACATCCCTGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARKHLKE*DIPAVL
Trigger: AAGTACAGCAGGGATGTCCCATTCTTTGAGATGCTT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAAGCCATTCAAGATaGCCTGGAATATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGSHSR*PGISAS
Trigger: TGAAGCAGATATTCCAGGCCATCTTGAATGGCTTCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCAAGAAACGGCAAGATaGCAGTTCTGCAGAAATACC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEQETAR*QFCRNT
Trigger: GGTATTTCTGCAGAACTGCCATCTTGCCGTTTCTTG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGATTCTGGAACTCTaGTCTGGATTGAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEEILEL*SGLKPQ
Trigger: TTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACCGTGTTTTCAAAGTaGTTAATTGCCCCAGAAATG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTVFSK*LIAPEM
Trigger: CATTTCTGGGGCAATTAATCACTTTGAAAACACGGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATCCTCAAACACGGCTaGCAGGTTGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCILKHG*QVGPGP
Trigger: GGGCCCGGGCCCAACCTGTCAGCCGTGTTTGAGGAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAGACAAAACTGTTTaGTGCTTGTTTCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEADKTV*CLFLDH
Trigger: GTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCGTATTTAGTAACTTaGCTGTTTAGGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSAYLVT*LFRTSG
Trigger: TCCAGAAGTCCTAAACAGTCAAGTTACTAAATACGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCGTATTTAGTAACTTaGCTGTTTAGGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPAYLVT*LFRTSG
Trigger: TCCAGAAGTCCTAAACAGTCAAGTTACTAAATACGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGGGACATAGCCAGCTaGTTCTTGAATTCTATTCAG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGERDIAS*FLNSIQ
Trigger: CTGAATAGAATTCAAGAATCAGCTGGCTATGTCCCT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGCTGATGAAATATTaGAACACCTCATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPLLMKY*NTSSLF
Trigger: GAACAGAGATGAGGTGTTTCAATATTTCATCAGCAG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTGCTGATGAAATATTaGAACACCTCATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLLMKY*NTSSLF
Trigger: GAACAGAGATGAGGTGTTTCAATATTTCATCAGCAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTATTTCAGTGAATACTaGTACATGGGGTCGATTTCC +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSYFSEY*YMGSIS
Trigger: GGAAATCGACCCCATGTATCAGTATTCACTGAAATA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGCAAAATAGATGCCTaGGTCAGAGTATGTGTAATC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGKIDA*VRVCVI
Trigger: GATTACACATACTCTGACTCAGGCATCTATTTTGCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATTCAAAGTGATTAATTaGCCCAGAAATGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPFKVIN*PRNAIQ
Trigger: CTGGATGGCATTTCTGGGGCAATTAATCACTTTGAA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTCAAAGTGATTAATTaGCCCAGAAATGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARFKVIN*PRNAIQ
Trigger: CTGGATGGCATTTCTGGGGCAATTAATCACTTTGAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATTGGAGAATACCTTaGACACACTTGGATAAGTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLHWRIP*THLDKS
Trigger: AGACTTATCCAAGTGTGTGCAAGGTATTCTCCAATG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTTCACCTTTGCTATTaGTTCATCTTCTTGCACAAC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHFHLCY*FIFLHN
Trigger: GTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCTTTAACCCACTCTTaGTTTCCTTGTTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPLTHS*FPCFLS
Trigger: GGATAAGAAACAAGGAAAGCAAGAGTGGGTTAAAGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCGTGGAAGAAACAAATaGCGAATATTAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHRGRNK*RILVFS
Trigger: GGAGAAAACTAATATTCGGCATTTGTTTCTTCCACG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGATTTTCTTCTGCCTaGTGTTCAATACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARGFSSA*CSILFR
Trigger: CCTGAAAAGTATTGAACACCAGGCAGAAGAAAATCC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCTTTTCACAGCTTCTTaGGCCTCGAGACTAATGATT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELFTAS*ASRLMI
Trigger: AATCATTAGTCTCGAGGCCCAAGAAGCTGTGAAAAG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGATTCTATGGAAGACTTaGGTACGGCAGAGATCATGT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEILWKT*VRQRSC
Trigger: ACATGATCTCTGCCGTACCCAAGTCTTCCATAGAAT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGTCTTTATTTTCTCCTaGTCAGCACTGATATCCAAG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPVFIFS*SALISK
Trigger: CTTGGATATCAGTGCTGACCAGGAGAAAATAAAGAC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTCTTTATTTTCTCCTaGTCAGCACTGATATCCAAG +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSVFIFS*SALISK
Trigger: CTTGGATATCAGTGCTGACCAGGAGAAAATAAAGAC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGTCTCCAGAAGTCCTaGCTGAGTCGCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSLQKS*LSRSPE
Trigger: CTCCGGGCTGCGACTCAGCCAGGACTTCTGGAGACT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCATGTTCTGGGATTTaGACTCCAGGAAAAAGATCA +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSCSGI*TPGKRS
Trigger: TGATCTTTTTCCTGGAGTCCAAATCCCAGAACATGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAAGCATCTCAAAGAATaGGACATCCCTGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEKHLKE*DIPAVL
Trigger: AAGTACAGCAGGGATGTCCCATTCTTTGAGATGCTT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTTCTCTTATTGTTCCTaGATCACATTGGAGAATACC +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHFSYCS*ITLENT
Trigger: GGTATTCTCCAATGTGATCCAGGAACAATAAGAGAA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTTGCTAGCTCCTCCTaGAATTTCTCAATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLFASSS*NFSMLS
Trigger: AGAAAGCATTGAGAAATTCCAGGAGGAGCTAGCAAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTTGCTAGCTCCTCCTaGAATTTCTCAATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSFASSS*NFSMLS
Trigger: AGAAAGCATTGAGAAATTCCAGGAGGAGCTAGCAAA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATGTCTTGGATTTCTTaGGCAAAATTAAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPMSWIS*AKLKTC
Trigger: GCACGTCTTTAATTTTGCTCAAGAAATCCAAGACAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATGTCTTGGATTTCTTaGGCAAAATTAAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLMSWIS*AKLKTC
Trigger: GCACGTCTTTAATTTTGCTCAAGAAATCCAAGACAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAATGCGTTATTGTTTTaGAAAGTCTCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPNALLF*KVSRSP
Trigger: AGGACTTCTGGAGACTTTTCAAAACAATAACGCATT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCTGCAAAGCCCCCATaGGGCAAAGGTAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPAAKPP*GKGSSD
Trigger: ATCGCTGCTACCTTTGCCTCATGGGGGCTTTGCAGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAAAAGCATGTGGATCTaGGGTGTGAGTTTAATCCTT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEKSMWI*GVSLIL
Trigger: AAGGATTAAACTCACACCTCAGATCCACATGCTTTT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCATTCCACATCGGCTaGCCGTGGCAGGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPFHIG*PWQERP
Trigger: TGGCCTCTCCTGCCACGGTCAGCCGATGTGGAATGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAACTTCTTTCTCTCCTaGATAATTGCGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPNFFLS*IIAWKK
Trigger: TTTCTTCCACGCAATTATTCAGGAGAGAAAGAAGTT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGAAACTATATCTCTTaGGTGCACATCAATGGTAAT +
Preference number: 4 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHRNYIS*VHINGN
Trigger: ATTACCATTGATGTGCACGCAAGAGATATAGTTTCT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCCTCCGAGGTCAAGCTaGAAAGCCCCCATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPPPRSS*KAPMRQ
Trigger: TTGCCTCATGGGGGCTTTGCAGCTTGACCTCGGAGG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGATTCAGCAATCCTTTTaGAATAACGGACTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEIQQSF*NNGLAN
Trigger: GTTGGCAAGTCCGTTATTGCAAAAGGATTGCTGAAT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGTATTCCAGGTCAATTaGAATTCCAAAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARVFQVN*NSKVLV
Trigger: AACAAGCACTTTGGAATTGCAATTGACCTGGAATAC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTTCGAGGGCGGGGAGTaGCTCCTCCAGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCFEGGE*LLQVSL
Trigger: CAGAGAGACCTGGAGGAGGCACTCCCCGCCCTCGAA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTGGAAGAAACAAATaGCGAATATTAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLRGRNK*RILVFS
Trigger: GGAGAAAACTAATATTCGGCATTTGTTTCTTCCACG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGATTTTCTTCTGCCTaGTGTTCAATACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGFSSA*CSILFR
Trigger: CCTGAAAAGTATTGAACACCAGGCAGAAGAAAATCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGACTCGAGCTTTGAAATaGAGTCGAAGCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGETRALK*SRSISL
Trigger: TAAGGAAATGCTTCGACTCCATTTCAAAGCTCGAGT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTCTCTTATTGTTCCTaGATCACATTGGAGAATACC +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLFSYCS*ITLENT
Trigger: GGTATTCTCCAATGTGATCCAGGAACAATAAGAGAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGTGATCTTTGAGTCCTaGAGTGTATCAATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLVIFES*SVSISS
Trigger: AGAACTTATTGATACACTCCAGGACTCAAAGATCAC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGTTTCTAGAGAGATGTaGATTAACTTCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPVSREM*INFRRL
Trigger: CAATCTCCTGAAGTTAATCCACATCTCTCTAGAAAC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCAGGCAGCTGCCTCTaGATGTCTGGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPAGSCL*MSGALK
Trigger: CTTTAATGCCCCAGACATTCAGAGGCAGCTGCCTGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTATGGTCAGGATCACTTaGGAAGGGTGGCCAGCGATC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPMVRIT*EGWPAI
Trigger: GATCGCTGGCCACCCTTCTCAAGTGATCCTGACCAT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGAGCTGCAAGTCTCGTaGGGGACTGCTTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCELQVS*GTAFPC
Trigger: GCACGGGAAAGCAGTCCCTCACGAGACTTGCAGCTC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAACTATTTTGATGATTTaGAAGGGGTCTCTAATGTTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPTILMI*KGSLML
Trigger: CAACATTAGAGACCCCTTGCAAATCATCAAAATAGT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCACGGCTTGCGGATTaGGTGTCTGGGCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPARLAD*VSGPKS
Trigger: AGATTTTGGCCCAGACACGCAATCCGCAAGCCGTGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATCAATGGTAATCAATaGAGTGATGATGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPINGNQ*SDDVSV
Trigger: CACAGAAACATCATCACTGCATTGATTACCATTGAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACTATATCTCTTGCGTaGACATCAATGGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSTISLA*TSMVIN
Trigger: ATTGATTACCATTGATGTGCACGCAAGAGATATAGT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACTATATCTCTTGCGTaGACATCAATGGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTISLA*TSMVIN
Trigger: ATTGATTACCATTGATGTGCACGCAAGAGATATAGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGATATTTGATGACGTTTaGTTTACTGCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEIFDDV*FTASGK
Trigger: CTTCCCAGAAGCAGTAAAGCAAACGTCATCAAATAT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTATTCCAGGTCAATTaGAATTCCAAAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEVFQVN*NSKVLV
Trigger: AACAAGCACTTTGGAATTGCAATTGACCTGGAATAC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTTCACCTTTGCTATTaGTTCATCTTCTTGCACAAC +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEFHLCY*FIFLHN
Trigger: GTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCTTCCCTGGGCCACTaGACAAACCAGTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPASLGH*TNQSMV
Trigger: CACCATTGACTGGTTTGTCCAGTGGCCCAGGGAAGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGACAAGAATTAGCTTATaGAAAGAGCTGAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARTRISL*KELKSK
Trigger: CTTAGACTTCAGCTCTTTCCATAAGCTAATTCTTGT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGTCCTGGTACAGAGTaGCCAGGTCCACTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCPGTE*PGPLEA
Trigger: CGCCTCCAGTGGACCTGGCCACTCTGTACCAGGACA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCATAGTTTTGTTTTaGTTCAAAGTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLIVLF*FKVNYR
Trigger: CCTGTAGTTCACTTTGAACCAAAACAAAACTATGAG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCGTTCCCCCTCAGGTaGCAGCATTGCCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPFPLR*QHCQDV
Trigger: GACATCTTGGCAATGCTGTCACCTGAGGGGGAACGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATTGCCTCTTGCCTTaGGGCCTTTCCCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCHCLLP*GLSPGQ
Trigger: TTGGCCTGGGGAAAGGCCTCAAGGCAAGAGGCAATG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGTCCTTGAGGGTCCTTaGCAAAAAGGCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPVLEGP*QKGSRK
Trigger: CTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGAC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTGGCAGAGCAACGCTaGCCCCTTGGAGATCCAGTA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLAEQR*PLGDPV
Trigger: TACTGGATCTCCAAGGGGTCAGCGTTGCTCTGCCAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGAGAGAACACATCTaGAGAGGGTCGATGGACCTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRREHI*RGSMDL
Trigger: CAGGTCCATCGACCCTCTGCAGATGTGTTCTCTCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGAAACTATATCTCTTaGGTGCACATCAATGGTAAT +
Preference number: 4 (lower is better)
Translates to: SRLRGHFLLIREDFWIGERNYIS*VHINGN
Trigger: ATTACCATTGATGTGCACGCAAGAGATATAGTTTCT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCTGATGTCCACCTGTaGGATAGCTTGGGTGCACTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPADVHL*DSLGAL
Trigger: AAGTGCACCCAAGCTATCCCACAGGTGGACATCAGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTACAGATCTCCAGAGCTaGGAAGCCTGGCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPTDLQS*EAWHQD
Trigger: ATCCTGATGCCAGGCTTCCCAGCTCTGGAGATCTGT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAATCCAGTGCTTTATTaGCAGCTTCGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPNPVLY*QLRGRG
Trigger: TCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAACCGGTCCACTTCCTaGCCAAGGACGGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCNRSTS*PRTVVR
Trigger: TCTGACCACCGTCCTTGGCCAGGAAGTGGACCGGTT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTCGAGACTAATGATTaGAGCTCTGTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLETND*SSVSRA
Trigger: AGCACGGCTGACAGAGCTTCAATCATTAGTCTCGAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTGATATCCAAGATCTaGGGGTCCTGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLISKI*GSCASS
Trigger: GCTGCTGGCACAGGACCCTCAGATCTTGGATATCAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGACCACATCTTCACTaGGGTCTGGGTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGPHLH*GLGSLF
Trigger: AAAGAGAGAACCCAGACCTCAGTGAAGATGTGGTCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGCCATCTTCTCCCCTaGGTAACCAAAATGCCATTC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGHLLP*VTKMPF
Trigger: GAATGGCATTTTGGTTACTCAGGGGAGAAGATGGCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCCTCAAGGATGGTGGTaGTCAGAGTGTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPPQGWW*SECWSL
Trigger: AAGAGACCAACACTCTGATCACCACCATCCTTGAGG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATCTGCTTCAGACTGTaGTCCGAGGGCATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCICFRL*SEGIGR
Trigger: TCTCCCGATGCCCTCGGAGCACAGTCTGAAGCAGAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTATGGCCTGGAATATCTaGTTCAGACTGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPMAWNI*FRLCSE
Trigger: CTCGGAGCACAGTCTGAAGCAGATATTCCAGGCCAT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCAGTGAGGAGGGTCTaGTGCAGGAGGATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCAVRRV*CRRIFR
Trigger: CCTGAAAATCCTCCTGCAGCAGACCCTCCTCACTGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGATCAGCTCTTCCATTaGCAGCATCCAAGAAACGGC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPDQLFH*QHPRNG
Trigger: GCCGTTTCTTGGATGCTGGCAATGGAAGAGCTGATC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGCGGATTGCGTGTCTaGGCCAAAATCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCGLRV*AKISRS
Trigger: GCTCCTGGAGATTTTGGCCCAGACACGCAATCCGCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGCTTTACTGCTTCTaGGAAGTCAGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLLYCF*EVSQEA
Trigger: GGCTTCCTGGCTGACTTCCCAGAAGCAGTAAAGCAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCTTCCCTGGGCCACTaGACAAACCAGTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCASLGH*TNQSMV
Trigger: CACCATTGACTGGTTTGTCCAGTGGCCCAGGGAAGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAGAGTACAGATCCATaGCTCTCACCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPESTDP*LSPTCT
Trigger: TGTGCATGTGGGTGAGAGCCATGGATCTGTACTCTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGGGTTCATCTGTCCTaGCAATGCGTCTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGVHLS*QCVFYD
Trigger: GTCATAGAAGACGCATTGCCAGGACAGATGAACCCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGGTTGAATGGCCTGTaGTTGAAAGTGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPWLNGL*LKVFLP
Trigger: GGGCAGGAACACTTTCAACCACAGGCCATTCAACCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGTGAGCCTCATGCAATaGTGCCTTTTGCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCVSLMQ*CLLLAC
Trigger: ACAGGCCAGCAAAAGGCATCATTGCATGAGGCTCAC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTCCTTAGAGTCACGGTaGGGAAGGATGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSLESR*GRMTNS
Trigger: GGAATTTGTCATCCTTCCTCACCGTGACTCTAAGGA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATAAGGCATCCACTTaGGTTCTTCGGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCHKAST*VLRGPR
Trigger: TCGTGGACCCCGAAGAACTCAAGTGGATGCCTTATG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGGAGGTGCACATGCTaGCACAATTGTTACATCCTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPWRCTC*HNCYIL
Trigger: CAGGATGTAACAATTGTGTCAGCATGTGCACCTCCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTCTCTCGAGCTATGTTaGTCATCAGCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSLELC*SSALWT
Trigger: AGTCCACAGAGCTGATGATCAACATAGCTCGAGAGA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGTTCGAAGGCATCTCTaGTCCCAGGTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCVRRHL*SQVSVT
Trigger: AGTGACAGACACCTGGGATCAGAGATGCCTTCGAAC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCACTTCAGGAGATTGTTaGACCGGTCCACTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCTSGDC*TGPLPG
Trigger: GCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCACATCAGGCTCCTCCTaGTTCAGGGCTTCTAGATCC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCTSGSS*FRASRS
Trigger: GGATCTAGAAGCCCTGAAGCAGGAGGAGCCTGATGT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTATAAGCCACGCAAGCTaGTGCTATGAACACGTTTCC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPISHAS*CYEHVS
Trigger: GGAAACGTGTTCATAGCAGCAGCTTGCGTGGCTTAT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTCCTTCTCCATCCCTaGAGAACCTCGGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLLLHP*RTSEEE
Trigger: TTCTTCCTCCGAGGTTCTGCAGGGATGGAGAAGGAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGCTCGCCTGATATTTaGACGCAAGCCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGSPDI*TQAFWR
Trigger: CCTCCAAAAGGCTTGCGTGCAAATATCAGGCGAGCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCATCTGTCCTGGCAATaGGTCTTCTATGACCATGTC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPHLSWQ*VFYDHV
Trigger: GACATGGTCATAGAAGACGCATTGCCAGGACAGATG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCAGAGCTGGGAAGCCTaGCATCAGGATTATCATCAA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPQSWEA*HQDYHQ
Trigger: TTGATGATAATCCTGATGCCAGGCTTCCCAGCTCTG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGTATCAGGCGCGCTTTaGTCAGGGCCATGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCVSGAL*SGPCSL
Trigger: CAAAGAACATGGCCCTGACCAAAGCGCGCCTGATAC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTTTGAAAGGCGCCCATaGGATCAGAGCCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCFERRP*DQSLCS
Trigger: TGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCAGTCACCACAAAGTTaGTTGAATGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPQSPQS*LNGLWL
Trigger: CAACCACAGGCCATTCAACCAACTTTGTGGTGACTG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTTCTGGTCCTCTCTTaGGCTTTTGTGGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPFLVLS*AFVVCL
Trigger: TAGGCATACCACAAAAGCTCAAGAGAGGACCAGAAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAATTCCAGAGCTCATaGGCTTCTGTCGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPEFQSS*ASVDSV
Trigger: AACAGAATCGACAGAAGCTCATGAGCTCTGGAATTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCTGTGCCAGCAGCTTaGCTTCATTCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPVPAA*LHSPHC
Trigger: ACAATGAGGTGAATGAAGTCAAGCTGCTGGCACAGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGCAAACTCGAGCTTTaGAATGGAGTCGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGKLEL*NGVEAF
Trigger: AAATGCTTCGACTCCATTTCAAAGCTCGAGTTTGCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCCAGTTTTGACTCAATaGTCTCCTGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPPVLTQ*SPVSLK
Trigger: CTTCAAGGACACAGGAGATCATTGAGTCAAAACTGG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCATCAGCGATCGCTTaGGTCTCTTCAGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSSAIA*VSSAFT
Trigger: GGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAATGCCATTCTCAGTTaGTATCAAGTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPNAILS*YQVSGQ
Trigger: CTGCCCAGAGACTTGATATCAACTGAGAATGGCATT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGCCATCTTCTCCCCTaGGTAACCAAAATGCCATTC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGHLLP*VTKMPF
Trigger: GAATGGCATTTTGGTTACTCAGGGGAGAAGATGGCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGTCCCAGAGAAATTaGCTGCACTCGTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLSQRN*LHSFCI
Trigger: TATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCTCATTGGTTACCTTaGCAGAATTCTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPAHWLP*QNSEGL
Trigger: CAGTCCTTCAGAATTCTGTCAAGGTAACCAATGAGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAATCTGGAGAGCTTTaGGGCTTTGGCATTCCTAAT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPESGEL*GFGIPN
Trigger: ATTAGGAATGCCAAAGCCGCAAAGCTCTCCAGATTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCACCAAGAAGTTGCTTTaGTGTTGGCCAGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCTKKLL*CWPVGL
Trigger: AAGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGGGGCAAAATAGATaGCTGAGTCAGAGTATGTGT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRGQNR*LSQSMC
Trigger: ACACATACTCTGACTCAGGCATCTATTTTGCCCCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGACAATTTCATCATTaGTTTTGCCCTGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGQFHH*FCPGRQ
Trigger: CTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGAAGCACCCTCCATCTaGAGAGATTCTGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCEAPSI*RDSGTL
Trigger: CAGAGTTCCAGAATCTCTGCAGATGGAGGGTGCTTC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTGCCTCTGAATGTCTaGGGCATTAAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLPLNV*GIKDAF
Trigger: GAAAGCATCTTTAATGCCCCAGACATTCAGAGGCAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGGGTCCAGGCGTTTaGTGTCAAAGTCTATATGAA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRGPGV*CQSLYE
Trigger: TTCATATAGACTTTGACACCAAACGCCTGGACCCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAAGTTGCTTTGCTGTTaGCCAGTCGGGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCKLLCC*PVGLGI
Trigger: AATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGGATTTGCAGGCCTTaGACACCTTCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCWICRP*TPSPPS
Trigger: AGAAGGTGGAGAAGGTGTCCAAGGCCTGCAAATCCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGATATCAAGTCTCTaGGCAGTCCATCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLISSL*AVHLCS
Trigger: GGAACACAGATGGACTGCCCAGAGACTTGATATCAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTGTCACAGGAAATGTaGAACAAGGCATGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLSQEM*NKAWSL
Trigger: TAAGCTCCATGCCTTGTTCCACATTTCCTGTGACAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGGGTTCATCTGTCCTaGCAATGCGTCTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGVHLS*QCVFYD
Trigger: GTCATAGAAGACGCATTGCCAGGACAGATGAACCCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGCATCTTGTGCCTCTaGGATGATAGCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCILCL*DDSIHL
Trigger: AAGGTGGATGCTATCATCTCAGAGGCACAAGATGCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCAGACAAAACTGTTTaGTGCTTGTTTCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPADKTV*CLFLDH
Trigger: GTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGGACACTTCCACCTTaGAATTCTTCTGGTAGGATT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPWTLPP*NSSGRI
Trigger: AATCCTACCAGAAGAATTTCAAGGTGGAAGTGTCCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTATGTCAATCCGGTTaGATTCGTCAAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLCQSG*IRQSST
Trigger: GGTGCTGCTTTGACGAATTCAACCGGATTGACATAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGGACATAGCCAGCTaGTTCTTGAATTCTATTCAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRDIAS*FLNSIQ
Trigger: CTGAATAGAATTCAAGAATCAGCTGGCTATGTCCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAATCCACCAAAATCTTaGTACTGCCGAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPNPPKS*YCRSSS
Trigger: TGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGTTTGTCTTCATTATTaGTCAGGCGGTCATGGAACA +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPVCLHY*SGGHGT
Trigger: TGTTCCATGACCGCCTGATCAATAATGAAGACAAAC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTGTGTCATCTTCCTTaGGAGTATTTTACTCGACTC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLCHLP*EYFTRL
Trigger: GAGTCGAGTAAAATACTCGCAAGGAAGATGACACAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCTGCTTTAAAAGGATaGGTTCCAGGGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSALKG*VPGLDP
Trigger: TGGATCCAGCCCTGGAACCCATCCTTTTAAAGCAGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATCCTCACGATTAGCTaGATCCTCTGTTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCILTIS*ILCSSN
Trigger: GTTGGAGGAACAGAGGATCCAGCTAATCGTGAGGAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCTAAGCCCCAAACATaGTCCTTCTCCTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSKPQT*SFSSSC
Trigger: ACACGAAGAGGAGAAGGACCATGTTTGGGGCTTAGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGCACGCAAGCCTTTTaGAGGCTCATTGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCTQAF*RLIGYL
Trigger: AAGGTAACCAATGAGCCTCCAAAAGGCTTGCGTGCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAAGCCACAAGCTCCTaGACAATTTCATCATTGCTT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPEATSS*TISSLL
Trigger: AAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGTAGAGTGTGTGGACTaGCTCATAGTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPVECVD*LIVLFW
Trigger: CCAAAACAAAACTATGAGCCAGTCCACACACTCTAC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTACCGTGTTTTCAAAGTaGTTAATTGCCCCAGAAATG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPTVFSK*LIAPEM
Trigger: CATTTCTGGGGCAATTAATCACTTTGAAAACACGGT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAAGGATTGTCTGTGTTaGGCTTTTCGAGGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCKDCLC*AFRGSL
Trigger: TAGGGAACCTCGAAAAGCTCAACACAGACAATCCTT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCATTTATGGTCTTCTaGAGTATCGTTCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPFMVF*SIVHSC
Trigger: GCAGCTGTGAACGATACTTCAGAAGACCATAAATGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAATGCCATTCTCAGTTaGTATCAAGTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCNAILS*YQVSGQ
Trigger: CTGCCCAGAGACTTGATATCAACTGAGAATGGCATT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCATTGGAGAATACCTTaGACACACTTGGATAAGTCT +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPHWRIP*THLDKS
Trigger: AGACTTATCCAAGTGTGTGCAAGGTATTCTCCAATG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTATTGCAATTCCAAAGTaGTTGTTGGCCATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPIAIPK*LLAISV
Trigger: GACAGAAATGGCCAACAAGCACTTTGGAATTGCAAT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCGTGCTGAAACTAACTaGTTCCTTTTCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCRAETN*FLFSVS
Trigger: GCTCACTGAGAAAAGGAAGCAGTTAGTTTCAGCACG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCACTCATGAACGTCTaGTTTAAAAGGATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPLMNV*FKRMGS
Trigger: GGAACCCATCCTTTTAAAGCAGACGTTCATGAGTGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGAAGCCATTCAAGATaGCCTGGAATATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGSHSR*PGISAS
Trigger: TGAAGCAGATATTCCAGGCCATCTTGAATGGCTTCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGGCATTTAAGAGGATaGAGATGGCTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCWHLRG*RWLPSQ
Trigger: CTGTGATGGAAGCCATCTCCATCCTCTTAAATGCCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGAGATTCTGGAACTCTaGTCTGGATTGAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCEILEL*SGLKPQ
Trigger: TTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCAAATTGAATGTCCTTaGCTGATTCTATCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPQIECP*LILSLQ
Trigger: CTGCAGTGATAGAATCAGCCAAGGACATTCAATTTG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCAACTCCTTGTCCATaGGCAGTTCTGTTCCAAATT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCATPCP*AVLFQI
Trigger: AATTTGGAACAGAACTGCCCATGGACAAGGAGTTGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGTGTCAAAGTCTATATaGATGCTCCACAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCVSKSI*MLHRSP
Trigger: TGGAGATCTGTGGAGCATTCATATAGACTTTGACAC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTGTGTCATCTTCCTTaGGAGTATTTTACTCGACTC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLCHLP*EYFTRL
Trigger: GAGTCGAGTAAAATACTCGCAAGGAAGATGACACAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGTTTCTAGAGAGATGTaGATTAACTTCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPVSREM*INFRRL
Trigger: CAATCTCCTGAAGTTAATCCACATCTCTCTAGAAAC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGCAAAGTCTTTATTTaGTCTTCCACTTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCKVFI*SSTCFS
Trigger: GCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCCTTTAACCCACTCTTaGTTTCCTTGTTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCPLTHS*FPCFLS
Trigger: GGATAAGAAACAAGGAAAGCAAGAGTGGGTTAAAGG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCATGTTCTGGGATTTaGACTCCAGGAAAAAGATCA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSCSGI*TPGKRS
Trigger: TGATCTTTTTCCTGGAGTCCAAATCCCAGAACATGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTCATAGTTTTGTTTTaGTTCAAAGTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLIVLF*FKVNYR
Trigger: CCTGTAGTTCACTTTGAACCAAAACAAAACTATGAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAATGCGTTATTGTTTTaGAAAGTCTCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCNALLF*KVSRSP
Trigger: AGGACTTCTGGAGACTTTTCAAAACAATAACGCATT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR TCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAACTTCTTTCTCTCCTaGATAATTGCGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCNFFLS*IIAWKK
Trigger: TTTCTTCCACGCAATTATTCAGGAGAGAAAGAAGTT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATATTTGATGACGTTTaGTTTACTGCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCIFDDV*FTASGK
Trigger: CTTCCCAGAAGCAGTAAAGCAAACGTCATCAAATAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR GCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATCAATGGTAATCAATaGAGTGATGATGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCINGNQ*SDDVSV
Trigger: CACAGAAACATCATCACTGCATTGATTACCATTGAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CCA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCACAAGAATTAGCTTATaGAAAGAGCTGAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCTRISL*KELKSK
Trigger: CTTAGACTTCAGCTCTTTCCATAAGCTAATTCTTGT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCAGGGGGCTTCTGGCTaGGGAGGGCGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHQGASG*GGRSFS
Trigger: GGAGAAGGAGCGCCCTCCCAAGCCAGAAGCCCCCTG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAACACGGCTGACAGGTaGGGCCCGGGCCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGENTADR*GPGPQV
Trigger: GACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGTT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAGGGGGCTTCTGGCTaGGGAGGGCGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARQGASG*GGRSFS
Trigger: GGAGAAGGAGCGCCCTCCCAAGCCAGAAGCCCCCTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp CCGGGCCAGCTGGTGCGCCTCCGAGGTCAAGCTGCAAAGCCCCCATaGGGCAAAGGTAGCAGCGATCCTTGGCTTGAACCAGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: PGQLVRLRGQAAKPP*GKGSSDPWLEPAQK
Trigger: TTTCTGAGCTGGTTCAAGCCAAGGATCGCTGCTACCTTTGCCTCATGGGGGCTTTGCAGCTTGACCTCGGAGGCGCACCAGCTGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114040.8
CDS CCA 90 bp AGCACGAGAACCACATCTGAATGGGCAGCCAGGGGGCTTCTGGCTTaGGAGGGCGCTCCTTCTCCATCCCTGCAGAACCTCGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: STRTTSEWAARGLLA*EGAPSPSLQNLGGR
Trigger: TCTTCCTCCGAGGTTCTGCAGGGATGGAGAAGGAGCGCCCTCCCAAGCCAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGTGAGGCTGCACGGCTaGCGGATTGCGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARVRLHG*RIACLG
Trigger: GCCCAGACACGCAATCCGCAAGCCGTGCAGCCTCAC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTGAGGCTGCACGGCTaGCGGATTGCGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSVRLHG*RIACLG
Trigger: GCCCAGACACGCAATCCGCAAGCCGTGCAGCCTCAC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTCAGCGATGGCAGCTTaGCACAGGCGGCGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSAMAA*HRRRRD
Trigger: GTCTCTCCGCCGCCTGTGCAAAGCTGCCATCGCTGA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS CCA 90 bp GCGGGATTTCAGTGTCCACTAGGAGGGCGTCGACGGTTTGCTCAATaGCTGCCCAGTGCCGGGCTTTCAGGGTTGGGTTCCTCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: AGFQCPLGGRRRFAQ*LPSAGLSGLGSSSQ
Trigger: TTGACTTGAGGAACCCAACCCTGAAAGCCCGGCACTGGGCAGCCATTGAGCAAACCGTCGACGCCCTCCTAGTGGACACTGAAATCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp TCAGGATCACTTGAGAAGGGTGGCCAGCGATCACCCACTCTGTCCTaGGTTTCCCCTGGTAATCAGCGATGGCAGCTTTGCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SGSLEKGGQRSPTLS*VSPGNQRWQLCTGG
Trigger: GCCGCCTGTGCAAAGCTGCCATCGCTGATTACCAGGGGAAACCCAGGACAGAGTGGGTGATCGCTGGCCACCCTTCTCAAGTGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGCACGGCTTGCGGATaGCGTGTCTGGGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHCTACG*RVWAKI
Trigger: GATTTTGGCCCAGACACGCAATCCGCAAGCCGTGCA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp CTTCCTCCACCTTACCAAGCCATTCTTCCACATTGCCTCTTGCCTTaGGGCCTTTCCCCAGGCCAACCCGTTCCCCCTCAGGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: LPPPYQAILPHCLLP*GLSPGQPVPPQVTA
Trigger: TGCTGTCACCTGAGGGGGAACGGGTTGGCCTGGGGAAAGGCCTCAAGGCAAGAGGCAATGTGGAAGAATGGCTTGGTAAGGTGGAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TCCACTTCCTGGCCAAGGACGGTGGTCAGAGAGTTCAGGCGTCCTTaGGGGTCCTTGACAAAAAGGCTCTCGGAAGCACCCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: STSWPRTVVREFRRP*GSLTKRLSEAPSIC
Trigger: GCAGATGGAGGGTGCTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCTCTGACCACCGTCCTTGGCCAGGAAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GTGTCCACTAGGAGGGCGTCGACGGTTTGCTCAATGGCTGCCCAGTaGCGGGCTTTCAGGGTTGGGTTCCTCAAGTCAATGATCACAGGA +
Preference number: 5 (lower is better)
Translates to: VSTRRASTVCSMAAQ*RAFRVGFLKSMITG
Trigger: TCCTGTGATCATTGACTTGAGGAACCCAACCCTGAAAGCCCGGCACTGGGCAGCCATTGAGCAAACCGTCGACGCCCTCCTAGTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCCAGTAATAGCGCAGTaGCCGCTGCCAGTCGAAGGA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARPVIAQ*PLPVEG
Trigger: TCCTTCGACTGGCAGCGGCAACTGCGCTATTACTGG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064948.13
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGGATGGCGAGGGCTTTaGCTAGGTCTTTGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHGWRGL*LGLWWS
Trigger: AGACCACCAAAGACCTAGCAAAAGCCCTCGCCATCC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCACAGTGTGGTCACTTaGCTGATGTCCACCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHHSVVT*LMSTCG
Trigger: CCCACAGGTGGACATCAGCAAAGTGACCACACTGTG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGCCGAAGCAGTTCAATaGGTGGTTGGGAGCCATAGC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHAEAVQ*VVGSHS
Trigger: GCTATGGCTCCCAACCACCAATTGAACTGCTTCGGC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGACTTGGCTGGGGTaGGCAGGAGATCGACACTCA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGTWLG*AGDRHS
Trigger: TGAGTGTCGATCTCCTGCCAACCCCAGCCAAGTCCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGAAGTTGCTTTGCTGTaGGCCAGTCGGGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHEVALL*ASRAWH
Trigger: ATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTTC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp TCAGTGAATACTGATACATGGGGTCGATTTCCGAGAGGCTGGCTATaGCGAAGTACATCACGGAGCCCTGAGTGGCCACCGGGCGGTACC +
Preference number: 5 (lower is better)
Translates to: SVNTDTWGRFPRGWL*RSTSRSPEWPPGGT
Trigger: GGTACCGCCCGGTGGCCACTCAGGGCTCCGTGATGTACTTCGTCATAGCCAGCCTCTCGGAAATCGACCCCATGTATCAGTATTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp GGCCAAGGACGGTGGTCAGAGAGTTCAGGCGTCCTTGAGGGTCCTTaGCAAAAAGGCTCTCGGAAGCACCCTCCATCTGCAGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GQGRWSESSGVLEGP*QKGSRKHPPSAEIL
Trigger: CAGAATCTCTGCAGATGGAGGGTGCTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCTCTGACCACCGTCCTTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTCTCCACCTTCTGTTaGAGCTGGGGCACCACACTG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARFSTFC*SWGTTL
Trigger: CAGTGTGGTGCCCCAGCTCAAACAGAAGGTGGAGAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGCGTTAGGCAGCCGGTaGACCTTCCTCATGATTTCC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSALGSR*TFLMIS
Trigger: GGAAATCATGAGGAAGGTCAACCGGCTGCCTAACGC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAATGGTCAGGATCACTaGAGAAGGGTGGCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHNGQDH*RRVASD
Trigger: ATCGCTGGCCACCCTTCTCAAGTGATCCTGACCATT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAAGTTGCTTTGCTGTaGGCCAGTCGGGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSAREVALL*ASRAWH
Trigger: ATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACCAAGAAGTTGCTTaGCTGTTGGCCAGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLHQEVA*LLASRA
Trigger: AGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGTG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATGGATTTGCAGGCCTaGGACACCTTCTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHMDLQA*DTFSTF
Trigger: GAAGGTGGAGAAGGTGTCCAAGGCCTGCAAATCCAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCTCCCTGGCAAACCTTaGAAAGGCGCCCATGGGATC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELPGKP*KGAHGI
Trigger: GATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTAGGCTGTCCTCGTTaGAGCCACAGGTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLGCPR*SHRSTN
Trigger: GTTCGTGGACCTGTGGCTCAAACGAGGACAGCCTAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTGAATGGCCTGTGGTaGAAAGTGTTCCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLNGLW*KVFLPG
Trigger: CCCGGGCAGGAACACTTTCAACCACAGGCCATTCAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp GTTTGTGCTGCTCGAAGAGTCCCCGAGACACATTGGTGTAGGCAGTaGGGAGGGTCTGCTGCAGGAGGATTTTCAGGCGTTCATGCAGGT +
Preference number: 5 (lower is better)
Translates to: VCAARRVPETHWCRQ*GGSAAGGFSGVHAG
Trigger: ACCTGCATGAACGCCTGAAAATCCTCCTGCAGCAGACCCTCCTCACTGCCTACACCAATGTGTCTCGGGGACTCTTCGAGCAGCACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TCTGGGAAGTCAGCCAGGAAGCCATTCAAGATGGCCTGGAATATCTaGTTCAGACTGTGCTCCGAGGGCATCGGGAGACACAGCATGCTG +
Preference number: 5 (lower is better)
Translates to: SGKSARKPFKMAWNI*FRLCSEGIGRHSML
Trigger: CAGCATGCTGTGTCTCCCGATGCCCTCGGAGCACAGTCTGAAGCAGATATTCCAGGCCATCTTGAATGGCTTCCTGGCTGACTTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GCGTTGCCCCTTTCCTGGCGGATCATCCGTGCAATTCTGGACACGTaGTCTATGGCATCCTGGAAGAACACCAGCTTGACTTCCTTAGGG +
Preference number: 5 (lower is better)
Translates to: ALPLSWRIIRAILDT*SMASWKNTSLTSLG
Trigger: CCCTAAGGAAGTCAAGCTGGTGTTCTTCCAGGATGCCATAGAGCACGTGTCCAGAATTGCACGGATGATCCGCCAGGAAAGGGGCAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GTCCCAGAGAAATTGACTGCACTCGTTCTGCATACCCGCTCTCCCTaGCAAACCTTTGAAAGGCGCCCATGGGATCAGAGCCTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: VPEKLTALVLHTRSP*QTFERRPWDQSLCS
Trigger: TGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAGAGCGGGTATGCAGAACGAGTGCAGTCAATTTCTCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGGGAACTGAAGAATaGGACATCAGGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPLGTEE*DIRLLL
Trigger: CAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACGATTGCCTCGAACTATaGCGGCCAGGGCATTTAATC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHDCLEL*RPGHLI
Trigger: GATTAAATGCCCTGGCCGCAATAGTTCGAGGCAATC...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATGACCAGTACAGACTaGACGGCCCTCATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPMTSTD*TALMPK
Trigger: CTTTGGCATGAGGGCCGTCAAGTCTGTACTGGTCAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGATGACCAGTACAGACTaGACGGCCCTCATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARMTSTD*TALMPK
Trigger: CTTTGGCATGAGGGCCGTCAAGTCTGTACTGGTCAT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACATCCCTGCTGTACTaGAAGGTGGGTATAATGCGC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHTSLLY*KVGIMR
Trigger: GCGCATTATACCCACCTTCAAGTACAGCAGGGATGT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCACCAAGAAGTTGCTTaGCTGTTGGCCAGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEHQEVA*LLASRA
Trigger: AGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGTG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGAGTCACCAAGAAGTaGCTTTGCTGTTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHRVTKK*LCCWPV
Trigger: GACTGGCCAACAGCAAAGCAACTTCTTGGTGACTCT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACATGCACATGGATTaGCAGGCCTTGGACACCTTC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHMHMD*QALDTF
Trigger: GAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTACTCCTTAAAGTCTaGGAGGCTGTCAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSVLLKV*EAVSQG
Trigger: CCCTTGGCTGACAGCCTCCAAGACTTTAAGGAGTAC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGTACTCCTTAAAGTCTaGGAGGCTGTCAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLVLLKV*EAVSQG
Trigger: CCCTTGGCTGACAGCCTCCAAGACTTTAAGGAGTAC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATTTCATCATTGCTTTaGCCCTGGCCGCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLISSLL*PWPPEE
Trigger: CTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGAGTTCAGGCGTCCTaGAGGGTCCTTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHRVQAS*RVLDKK
Trigger: CTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCTCAGAATAAGGTCTTaGACCCATGATCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHLRIRS*THDPSG
Trigger: GCCACTGGGATCATGGGTCAAAGACCTTATTCTGAG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp AAAATGGGAAATGACTCTTCTAGATCACAGCACGAGAACCACATCTaGATGGGCAGCCAGGGGGCTTCTGGCTTGGGAGGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KMGNDSSRSQHENHI*MGSQGASGLGGRSF
Trigger: GAAGGAGCGCCCTCCCAAGCCAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTGCTGTGATCTAGAAGAGTCATTTCCCATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TCTGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATTGCTTTTaGCCTGGCCGCCAGAGGAGGACCTTGGCTGGACCTCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: SGLKPQAPGQFHHCF*PGRQRRTLAGPQGW
Trigger: CCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp CTCTGGTCTGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATTaGTTTTGCCCTGGCCGCCAGAGGAGGACCTTGGCTGGACCTCAA +
Preference number: 5 (lower is better)
Translates to: LWSGLKPQAPGQFHH*FCPGRQRRTLAGPQ
Trigger: TTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp AGCGCAGTTGCCGCTGCCAGTCGAAGGAGTCGGCTGAGTCGACCTTaGCTTGAACCAGCTCAGAAACTATATCTCTTGCGTGCACATCAA +
Preference number: 5 (lower is better)
Translates to: SAVAAASRRSRLSRP*LEPAQKLYLLRAHQ
Trigger: TTGATGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGTCGACTCAGCCGACTCCTTCGACTGGCAGCGGCAACTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCAGCCAGTGATTTTCTaGGAGCGCACGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEQPVIF*ERTFFL
Trigger: GAGGAAGAACGTGCGCTCCAAGAAAATCACTGGCTG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCGATCACCCACAGATTaGTCAATGGCATTCCGGACG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGERSPTD*SMAFRT
Trigger: CGTCCGGAATGCCATTGACAAATCTGTGGGTGATCG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTCCCAGAGCAGTTGTTaGAGCCTGAGTTCAGCACTA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSQSSC*SLSSAL
Trigger: TAGTGCTGAACTCAGGCTCAAACAACTGCTCTGGGA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAATCCCAGAGCAGTaGTTTGAGCCTGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGIPEQ*FEPEFS
Trigger: GCTGAACTCAGGCTCAAACAACTGCTCTGGGATTCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGATTGCCTCGAACTATaGCGGCCAGGGCATTTAATC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPDCLEL*RPGHLI
Trigger: GATTAAATGCCCTGGCCGCAATAGTTCGAGGCAATC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGAGAGCTTTGCGGCTTaGGCATTCCTAATGGTGATG +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSESFAA*AFLMVM
Trigger: CATCACCATTAGGAATGCCAAAGCCGCAAAGCTCTC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACCTGTGGGATAGCTaGGGTGCACTTTTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHLWDS*GALFVH
Trigger: GTGAACAAAAAGTGCACCCAAGCTATCCCACAGGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACATCCCTGCTGTACTaGAAGGTGGGTATAATGCGC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSTSLLY*KVGIMR
Trigger: GCGCATTATACCCACCTTCAAGTACAGCAGGGATGT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGGATCCGTGAAGGTTTaGATCAGCTCTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPGSVKV*ISSSIA
Trigger: GGCAATGGAAGAGCTGATCAAAACCTTCACGGATCC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAACTCTGGTCTGGATaGAAGCCACAAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEELWSG*KPQAPG
Trigger: TCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTTC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAGAGTTCAGGCGTCCTaGAGGGTCCTTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPRVQAS*RVLDKK
Trigger: CTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCAGAATAAGGTCTTaGACCCATGATCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLRIRS*THDPSG
Trigger: GCCACTGGGATCATGGGTCAAAGACCTTATTCTGAG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCCCTGTGAGAAATCCTaGTGGGAAGAAGAACCCCGA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEPCEKS*WEEEPR
Trigger: TCGGGGTTCTTCTTCCCACAAGGATTTCTCACAGGG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp TTGCATGATGATGGTGAGAAAGTTCCTGTCATCCTCAAACACGGCTaGCAGGTTGGGCCCGGGCCCGCAGGTCTTTTCCTCAACCTTCTT +
Preference number: 5 (lower is better)
Translates to: LHDDGEKVPVILKHG*QVGPGPAGLFLNLL
Trigger: AAGAAGGTTGAGGAAAAGACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGTTTGAGGATGACAGGAACTTTCTCACCATCATCATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp GAGCGCGTTAGGCAGCCGGTTGACCTTCCTCATGATTTCCTTCCATaGCTTATCCACCTGAAGGAACATCTTGGCTTCTGCAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ERVRQPVDLPHDFLP*LIHLKEHLGFCRQL
Trigger: CAGCTGCCTGCAGAAGCCAAGATGTTCCTTCAGGTGGATAAGTCATGGAAGGAAATCATGAGGAAGGTCAACCGGCTGCCTAACGCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp AGGGCAAACTCGAGCTTTGAAATGGAGTCGAAGCATTTCCTTAGGTaGGGCTGCACGGCTTGCGGATTGCGTGTCTGGGCCAAAATCTCC +
Preference number: 5 (lower is better)
Translates to: RANSSFEMESKHFLR*GCTACGLRVWAKIS
Trigger: GGAGATTTTGGCCCAGACACGCAATCCGCAAGCCGTGCAGCCTCACCTAAGGAAATGCTTCGACTCCATTTCAAAGCTCGAGTTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp ATAATGCGCTCCCAGGGGTCCAGGCGTTTGGTGTCAAAGTCTATATaGATGCTCCACAGATCTCCAGAGCTGGGAAGCCTGGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: IMRSQGSRRLVSKSI*MLHRSPELGSLASG
Trigger: TCCTGATGCCAGGCTTCCCAGCTCTGGAGATCTGTGGAGCATTCATATAGACTTTGACACCAAACGCCTGGACCCCTGGGAGCGCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp ATTGACTGCACTCGTTCTGCATACCCGCTCTCCCTGGCAAACCTTTaGAAGGCGCCCATGGGATCAGAGCCTGTGCTCAAGATAAAGACC +
Preference number: 5 (lower is better)
Translates to: IDCTRSAYPLSLANL*KAPMGSEPVLKIKT
Trigger: GGTCTTTATCTTGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAGAGCGGGTATGCAGAACGAGTGCAGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TGCGCTCCCAGGGGTCCAGGCGTTTGGTGTCAAAGTCTATATGAATaGTCCACAGATCTCCAGAGCTGGGAAGCCTGGCATCAGGATTAT +
Preference number: 5 (lower is better)
Translates to: CAPRGPGVWCQSLYE*STDLQSWEAWHQDY
Trigger: ATAATCCTGATGCCAGGCTTCCCAGCTCTGGAGATCTGTGGAGCATTCATATAGACTTTGACACCAAACGCCTGGACCCCTGGGAGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CACTTCCGGAAGAGAGCGAAGATGGGGATCTTCGTGAGCTCTCTGTaGTACAGGTACTCCTGTTCCCATCGCTCAATCTCGATGTACTCG +
Preference number: 5 (lower is better)
Translates to: HFRKRAKMGIFVSSL*YRYSCSHRSISMYS
Trigger: CGAGTACATCGAGATTGAGCGATGGGAACAGGAGTACCTGTACCACAGAGAGCTCACGAAGATCCCCATCTTCGCTCTCTTCCGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTTCTGGTCCTCTCTaGAGCTTTTGTGGTATGCCT +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLSGPL*SFCGMP
Trigger: AGGCATACCACAAAAGCTCAAGAGAGGACCAGAAAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTCATTCACCTCATTGTaGAGATCTTCAAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSFTSL*RSSRSR
Trigger: TCGGGACCTTGAAGATCTCAACAATGAGGTGAATGA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGGGCAAACTCGAGCTTaGAAATGGAGTCGAAGCATT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLGQTRA*KWSRSI
Trigger: AATGCTTCGACTCCATTTCAAAGCTCGAGTTTGCCC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGAGCTTTGCGGCTTaGGCATTCCTAATGGTGATG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEESFAA*AFLMVM
Trigger: CATCACCATTAGGAATGCCAAAGCCGCAAAGCTCTC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCAACTTCCTTTGCTTTaGGTCGGGTGGCTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARQLPLL*VGWLLK
Trigger: TTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGTTG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATCATCAGCGATCGCTaGAGTCTCTTCAGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLIISDR*SLFSFH
Trigger: GTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAATCATCAGCGATCGCTaGAGTCTCTTCAGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPIISDR*SLFSFH
Trigger: GTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGAT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAGGCGTTCATGCAGGTaGTCACTCTTCTCAGATGTT +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPRRSCR*SLFSDV
Trigger: AACATCTGAGAAGAGTGACAACCTGCATGAACGCCT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGATCCGTGAAGGTTTaGATCAGCTCTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGSVKV*ISSSIA
Trigger: GGCAATGGAAGAGCTGATCAAAACCTTCACGGATCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTGCACGCAAGCCTTTaGGAGGCTCATTGGTTACCT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELHASL*EAHWLP
Trigger: AGGTAACCAATGAGCCTCCAAAAGGCTTGCGTGCAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAACTTCAGGAGATTGTaGAACCGGTCCACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGENFRRL*NRSTSW
Trigger: CCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAGCCCAGCAATGGCTTaGTTGAGTGTTTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSPAMA*LSVSRE
Trigger: CTCTCTAGAAACACTCAACAAAGCCATTGCTGGGCT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp AAACGGCGAAGTCTTCGGGAGGTGTGGGCACCTGATACTGTTCAATaGGCTTGTACATCTGAACCACTACATTCGCTTCCTCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KRRSLREVWAPDTVQ*ACTSEPLHSLPPPG
Trigger: CCCTGGAGGAGGAAGCGAATGTAGTGGTTCAGATGTACAAGCTCATTGAACAGTATCAGGTGCCCACACCTCCCGAAGACTTCGCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp AGTTGCCGCTGCCAGTCGAAGGAGTCGGCTGAGTCGACCTTGGCTTaGACCAGCTCAGAAACTATATCTCTTGCGTGCACATCAATGGTA +
Preference number: 5 (lower is better)
Translates to: SCRCQSKESAESTLA*TSSETISLACTSMV
Trigger: TACCATTGATGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGTCGACTCAGCCGACTCCTTCGACTGGCAGCGGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS TCA 90 bp TCAGCTGGCAGAGCAACGCTGACCCCTTGGAGATCCAGTAATCACTaGTCCTCTTGGAGGGTAAGAGGACAGTCACCACAAAGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SAGRATLTPWRSSNH*SSWRVRGQSPQSWL
Trigger: CAACCAACTTTGTGGTGACTGTCCTCTTACCCTCCAAGAGGATCAGTGATTACTGGATCTCCAAGGGGTCAGCGTTGCTCTGCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GCTAGCTCCTCCTGGAATTTCTCAATGCTTTCTTCCCACCGAACCTaGTCGTCTCCTAATGCAGCCGTTAGCTTTCCAGCACGTATCAGG +
Preference number: 5 (lower is better)
Translates to: ASSSWNFSMLSSHRT*SSPNAAVSFPARIR
Trigger: CCTGATACGTGCTGGAAAGCTAACGGCTGCATTAGGAGACGAGCAGGTTCGGTGGGAAGAAAGCATTGAGAAATTCCAGGAGGAGCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GAATCTCCGAGGTGGATGAGCAGTCTTCCGCCACTCATGAACGTCTaGTTTAAAAGGATGGGTTCCAGGGCTGGATCCAAGACTTCTCTG +
Preference number: 5 (lower is better)
Translates to: ESPRWMSSLPPLMNV*FKRMGSRAGSKTSL
Trigger: CAGAGAAGTCTTGGATCCAGCCCTGGAACCCATCCTTTTAAAGCAGACGTTCATGAGTGGCGGAAGACTGCTCATCCACCTCGGAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp CCGGTTTTCATTGCATCCTTGATCATCTTCTCAGCAATGGGGCCCTaGCCTTGTCCCAGAGAAATTGACTGCACTCGTTCTGCATACCCG +
Preference number: 5 (lower is better)
Translates to: PVFIASLIIFSAMGP*PCPREIDCTRSAYP
Trigger: CGGGTATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAAGGGCAGGGCCCCATTGCTGAGAAGATGATCAAGGATGCAATGAAAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GCCATAGCGCACTGTGTCTGTTGTGGGGACAAGCATCTCAAAGAATaGGACATCCCTGCTGTACTTGAAGGTGGGTATAATGCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: AIAHCVCCGDKHLKE*DIPAVLEGGYNALP
Trigger: TGGGAGCGCATTATACCCACCTTCAAGTACAGCAGGGATGTCCCATTCTTTGAGATGCTTGTCCCCACAACAGACACAGTGCGCTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp TTTGCTTTACTGCTTCTGGGAAGTCAGCCAGGAAGCCATTCAAGATaGCCTGGAATATCTGCTTCAGACTGTGCTCCGAGGGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: FALLLLGSQPGSHSR*PGISASDCAPRASG
Trigger: TCCCGATGCCCTCGGAGCACAGTCTGAAGCAGATATTCCAGGCCATCTTGAATGGCTTCCTGGCTGACTTCCCAGAAGCAGTAAAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GACAATTTCATCATTGCTTTTGCCCTGGCCGCCAGAGGAGGACCTTaGCTGGACCTCAAGGATGGTGGTGATCAGAGTGTTGGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DNFIIAFALAARGGP*LDLKDGGDQSVGLF
Trigger: AAAGAGACCAACACTCTGATCACCACCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp TGCAGAGATTCTGGAACTCTGGTCTGGATTGAAGCCACAAGCTCCTaGACAATTTCATCATTGCTTTTGCCCTGGCCGCCAGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: CRDSGTLVWIEATSS*TISSLLLPWPPEED
Trigger: GTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTGTACGTCGGATAAGTaGAAGACCTCATTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHCTSDK*KTSFQR
Trigger: TCTTTGGAATGAGGTCTTCAACTTATCCGACGTACA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAACACGGCTGACAGGTaGGGCCCGGGCCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCNTADR*GPGPQV
Trigger: GACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGTT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTGTAATTTAGGAAGATaGCCTCGAACTATTGCGGCC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSCNLGR*PRTIAA
Trigger: GGCCGCAATAGTTCGAGGCAATCTTCCTAAATTACA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCTATGTCAATCCGGTaGAATTCGTCAAAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSMSIR*NSSKQH
Trigger: GTGCTGCTTTGACGAATTCAACCGGATTGACATAGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCTATGTCAATCCGGTaGAATTCGTCAAAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSMSIR*NSSKQH
Trigger: GTGCTGCTTTGACGAATTCAACCGGATTGACATAGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCGTCATGTTCTGGGATTaGGACTCCAGGAAAAAGATC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSVMFWD*DSRKKI
Trigger: GATCTTTTTCCTGGAGTCCAAATCCCAGAACATGAC...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGTCATGTTCTGGGATTaGGACTCCAGGAAAAAGATC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLVMFWD*DSRKKI
Trigger: GATCTTTTTCCTGGAGTCCAAATCCCAGAACATGAC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAAAGGATTGTCTGTGTaGAGCTTTTCGAGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSKGLSV*SFSRFP
Trigger: AGGGAACCTCGAAAAGCTCAACACAGACAATCCTTT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAAAAGGATTGTCTGTGTaGAGCTTTTCGAGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPKGLSV*SFSRFP
Trigger: AGGGAACCTCGAAAAGCTCAACACAGACAATCCTTT...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTCCAAGGTCACGTTATaGACTTCCCCATATAACTCT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSKVTL*TSPYNS
Trigger: AGAGTTATATGGGGAAGTCAATAACGTGACCTTGGA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCTTGGGTGCACTTTTaGTTCACAAAATGCAACCCA +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPAWVHF*FTKCNP
Trigger: TGGGTTGCATTTTGTGAACAAAAAGTGCACCCAAGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATACCTTGCACACACTaGGATAAGTCTCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHIPCTH*DKSLRL
Trigger: TAACCTGAGAGACTTATCCAAGTGTGTGCAAGGTAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGTTCCTGGATCACATaGGAGAATACCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARCSWIT*ENTLHT
Trigger: TGTGTGCAAGGTATTCTCCAATGTGATCCAGGAACA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATGAGAAGAATGACTTaGATACAGACAGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHMRRMT*IQTGAL
Trigger: AAGCGCTCCTGTCTGTATCAAAGTCATTCTTCTCAT...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTCAGAGATATCTGCTTaGTCTAAGGAATCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHSEISA*SKESSA
Trigger: AGCACTGGATTCCTTAGACAAAGCAGATATCTCTGA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTGCTTCAGCAATGCTaGCTTTTCTTTCAGGGTAGC +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLLQQC*LFFQGS
Trigger: GCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCAGGGCCATGTTCTTaGCCAGACTTTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSGPCS*PDFLSH
Trigger: ATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTCAGGGCCATGTTCTTaGCCAGACTTTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLSGPCS*PDFLSH
Trigger: ATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTCGATTGGCCTGATCTaGAGGATCAATCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSIGLI*RINHQR
Trigger: CCTTTGATGATTGATCCTCAAGATCAGGCCAATCGA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCCACTCTTGCTTTCCTaGTTTCTTATCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHPLLLS*FLIHRL
Trigger: CAATCGATGGATAAGAAACAAGGAAAGCAAGAGTGG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCTTGTCCCAGAGAAATaGACTGCACTCGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELVPEK*TALVLH
Trigger: ATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAAG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCAATGGCTTTGTaGAGTGTTTCTAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLPAMAL*SVSREM
Trigger: CATCTCTCTAGAAACACTCAACAAAGCCATTGCTGG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCAGCAATGGCTTTGTaGAGTGTTTCTAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPPAMAL*SVSREM
Trigger: CATCTCTCTAGAAACACTCAACAAAGCCATTGCTGG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAGCCCAGCAATGGCTTaGTTGAGTGTTTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESPAMA*LSVSRE
Trigger: CTCTCTAGAAACACTCAACAAAGCCATTGCTGGGCT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp CCAGGCGCTCTGTCACCTCCTGCAGTCGCACTATTTGTGCAGCCTTaGACTCCTGCAGGGTGTAGGTGTGGAATTTTTCAATGTAACAGA +
Preference number: 5 (lower is better)
Translates to: PGALSPPAVALFVQP*TPAGCRCGIFQCNR
Trigger: TCTGTTACATTGAAAAATTCCACACCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTGCAGGAGGTGACAGAGCGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp GGAGAGGCCACCCTGAGGTCTTGTACCTCAAAAAGCATGTGGATCTaGGGTGTGAGTTTAATCCTTTCGCTGTTAGCCAGGCACAGCATC +
Preference number: 5 (lower is better)
Translates to: GEATLRSCTSKSMWI*GVSLILSLLARHSI
Trigger: GATGCTGTGCCTGGCTAACAGCGAAAGGATTAAACTCACACCTCAGATCCACATGCTTTTTGAGGTACAAGACCTCAGGGTGGCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp AGCAGGCCTACGTTTCGGGTGGGTCTCAGGGCTACCGAGTCCTTGTaGTGTTTATGGTATTTTTCCAGCTGGGAACTGAAGAATTGGACA +
Preference number: 5 (lower is better)
Translates to: SRPTFRVGLRATESL*CLWYFSSWELKNWT
Trigger: TGTCCAATTCTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGGACTCGGTAGCCCTGAGACCCACCCGAAACGTAGGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ACATCTGCAGAGGGTCGATGGACCTGTTTCCTTTTCACAGCTTCTTaGGCCTCGAGACTAATGATTGAAGCTCTGTCAGCCGTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: TSAEGRWTCFLFTAS*ASRLMIEALSAVLG
Trigger: ACCAAGCACGGCTGACAGAGCTTCAATCATTAGTCTCGAGGCCCAAGAAGCTGTGAAAAGGAAACAGGTCCATCGACCCTCTGCAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GGCAGTTTAGTCGGAGAAGGAGAGAACACATCTGCAGAGGGTCGATaGACCTGTTTCCTTTTCACAGCTTCTTGGGCCTCGAGACTAATG +
Preference number: 5 (lower is better)
Translates to: GSLVGEGENTSAEGR*TCFLFTASWASRLM
Trigger: CATTAGTCTCGAGGCCCAAGAAGCTGTGAAAAGGAAACAGGTCCATCGACCCTCTGCAGATGTGTTCTCTCCTTCTCCGACTAAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CTCAGGGCTACCGAGTCCTTGTGCTGTTTATGGTATTTTTCCAGCTaGGAACTGAAGAATTGGACATCAGGCTCCTCCTGCTTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRATESLCCLWYFSS*ELKNWTSGSSCFRA
Trigger: AGCCCTGAAGCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGGACTCGGTAGCCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ACGTTTCGGGTGGGTCTCAGGGCTACCGAGTCCTTGTGCTGTTTATaGTATTTTTCCAGCTGGGAACTGAAGAATTGGACATCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TFRVGLRATESLCCL*YFSSWELKNWTSGS
Trigger: GGAGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGGACTCGGTAGCCCTGAGACCCACCCGAAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CTCCAGCAGGCAGCACAGTGTGGTCACTTTGCTGATGTCCACCTGTaGGATAGCTTGGGTGCACTTTTTGTTCACAAAATGCAACCCATC +
Preference number: 5 (lower is better)
Translates to: LQQAAQCGHFADVHL*DSLGALFVHKMQPI
Trigger: GATGGGTTGCATTTTGTGAACAAAAAGTGCACCCAAGCTATCCCACAGGTGGACATCAGCAAAGTGACCACACTGTGCTGCCTGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GCTTGCTTTTCTTTCAGGGTAGCCATTGTAGCGTCAAGTTCAGCCTaGGCAGCACGGAGCTTCTGTCTCTTTGGTTCAACTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: ACFSFRVAIVASSSA*AARSFCLFGSTSLT
Trigger: GGTCAAGGAAGTTGAACCAAAGAGACAGAAGCTCCGTGCTGCCCAGGCTGAACTTGACGCTACAATGGCTACCCTGAAAGAAAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CTCCTAATGCAGCCGTTAGCTTTCCAGCACGTATCAGGCGCGCTTTaGTCAGGGCCATGTTCTTTGCCAGACTTTCTTTCTCATTCACTC +
Preference number: 5 (lower is better)
Translates to: LLMQPLAFQHVSGAL*SGPCSLPDFLSHSL
Trigger: GAGTGAATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGACCAAAGCGCGCCTGATACGTGCTGGAAAGCTAACGGCTGCATTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTGTACGTCGGATAAGTaGAAGACCTCATTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARCTSDK*KTSFQR
Trigger: TCTTTGGAATGAGGTCTTCAACTTATCCGACGTACA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTCATTCACCTCATTGTaGAGATCTTCAAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESFTSL*RSSRSR
Trigger: TCGGGACCTTGAAGATCTCAACAATGAGGTGAATGA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTCAGCGATGGCAGCTTaGCACAGGCGGCGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSAMAA*HRRRRD
Trigger: GTCTCTCCGCCGCCTGTGCAAAGCTGCCATCGCTGA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTGTAATTTAGGAAGATaGCCTCGAACTATTGCGGCC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGECNLGR*PRTIAA
Trigger: GGCCGCAATAGTTCGAGGCAATCTTCCTAAATTACA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGAGCTGTATCACCTTTTaGACCATACATAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARSCITF*TIHNSG
Trigger: GCCTGAGTTATGTATGGTCAAAAAGGTGATACAGCT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCAGCTGTATCACCTTTTaGACCATACATAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSCITF*TIHNSG
Trigger: GCCTGAGTTATGTATGGTCAAAAAGGTGATACAGCT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCCAAGGTCACGTTATaGACTTCCCCATATAACTCT +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSKVTL*TSPYNS
Trigger: AGAGTTATATGGGGAAGTCAATAACGTGACCTTGGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTTGGGTGCACTTTTaGTTCACAAAATGCAACCCA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEAWVHF*FTKCNP
Trigger: TGGGTTGCATTTTGTGAACAAAAAGTGCACCCAAGC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGAAGATATTTCCATCTTaGCTGAGCAGCAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEKIFPS*LSSRDS
Trigger: GGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCATACCTTGCACACACTaGGATAAGTCTCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSIPCTH*DKSLRL
Trigger: TAACCTGAGAGACTTATCCAAGTGTGTGCAAGGTAT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCAGCAATTCCAAAGTGCTaGTTGGCCATTTCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPAIPKC*LAISVK
Trigger: TTTGACAGAAATGGCCAACAAGCACTTTGGAATTGC...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATGAGAAGAATGACTTaGATACAGACAGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLMRRMT*IQTGAL
Trigger: AAGCGCTCCTGTCTGTATCAAAGTCATTCTTCTCAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTTGCTTCAGCAATGCTaGCTTTTCTTTCAGGGTAGC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELLQQC*LFFQGS
Trigger: GCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACTATTTGATCTTCCACTaGCTTCAGCAATGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHYLIFH*LQQCLL
Trigger: AAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATA...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCCACTCTTGCTTTCCTaGTTTCTTATCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSPLLLS*FLIHRL
Trigger: CAATCGATGGATAAGAAACAAGGAAAGCAAGAGTGG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTGGTTTTTATCGCTGTaGATCCTCACGATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEWFLSL*ILTISW
Trigger: CCAGCTAATCGTGAGGATCAACAGCGATAAAAACCA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGATTAACTTCAGGAGATaGTTGAACCGGTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEINFRR*LNRSTS
Trigger: GGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAAT...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp AAGGCAGCTTCCCCAGAAGCCTGCCCAGATATGTCTTGGATTTCTTaGGCAAAATTAAAGACGTGCAGTTCGGACAGCCTCTCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: KAASPEACPDMSWIS*AKLKTCSSDSLSKV
Trigger: GACCTTGGAGAGGCTGTCCGAACTGCACGTCTTTAATTTTGCTCAAGAAATCCAAGACATATCTGGGCAGGCTTCTGGGGAAGCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp ACTTCAGGGGACCCACATACCGGGATGAGGCAATGGTTGCAATGTTaGTGGTGCTATCATCAAGTAGGACCTGTATGTCATCTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: TSGDPHTGMRQWLQC*WCYHQVGPVCHLCH
Trigger: GTGGCACAGATGACATACAGGTCCTACTTGATGATAGCACCATCAACATTGCAACCATTGCCTCATCCCGGTATGTGGGTCCCCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp GGAAGCACCCTCCATCTGCAGAGATTCTGGAACTCTGGTCTGGATTaGAGCCACAAGCTCCTGGACAATTTCATCATTGCTTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSTLHLQRFWNSGLD*SHKLLDNFIIAFAL
Trigger: CAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTCTGCAGATGGAGGGTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GAAAACTTCCAGGCGCTCTGTCACCTCCTGCAGTCGCACTATTTGTaGAGCCTTGAACTCCTGCAGGGTGTAGGTGTGGAATTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: ENFQALCHLLQSHYL*SLELLQGVGVEFFN
Trigger: ATTGAAAAATTCCACACCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTGCAGGAGGTGACAGAGCGCCTGGAAGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TCGGCTAAGTTCGATCTGCATACACTTGTAACCACATATATGAGCTaGAAGTCTCGTGAGGGACTGCTTTCCCGTGCCTCCTACACCAAC +
Preference number: 5 (lower is better)
Translates to: SAKFDLHTLVTTYMS*KSREGLLSRASYTN
Trigger: GTTGGTGTAGGAGGCACGGGAAAGCAGTCCCTCACGAGACTTGCAGCTCATATATGTGGTTACAAGTGTATGCAGATCGAACTTAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CTGGAGAGCTTTGCGGCTTTGGCATTCCTAATGGTGATGAGTTGCTaGGCAATGACCGACAGGACTTCTATGTCAATCCGGTTGAATTCG +
Preference number: 5 (lower is better)
Translates to: LESFAALAFLMVMSC*AMTDRTSMSIRLNS
Trigger: CGAATTCAACCGGATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAAGCTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp GCTGCTGCTATGAACACGTTTCCAACGATGTTTGCTAGCTCCTCCTaGAATTTCTCAATGCTTTCTTCCCACCGAACCTGCTCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: AAAMNTFPTMFASSS*NFSMLSSHRTCSSP
Trigger: AGGAGACGAGCAGGTTCGGTGGGAAGAAAGCATTGAGAAATTCCAGGAGGAGCTAGCAAACATCGTTGGAAACGTGTTCATAGCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp AAAGGCTCTCGGAAGCACCCTCCATCTGCAGAGATTCTGGAACTCTaGTCTGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: KGSRKHPPSAEILEL*SGLKPQAPGQFHHC
Trigger: GCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTCTGCAGATGGAGGGTGCTTCCGAGAGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTGCCCAGATATGTCTaGGATTTCTTGAGCAAAATT +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLPRYV*DFLSKI
Trigger: AATTTTGCTCAAGAAATCCAAGACATATCTGGGCAG...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACCAGCTTCTACAATATTaGATGACGTTTGCTTTACTG +
Preference number: 5 (lower is better)
Translates to: QRSLPPHQGRLLDRRGSHQLLQY*MTFALL
Trigger: CAGTAAAGCAAACGTCATCAAATATTGTAGAAGCTG...GTGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGAAGTTCTTCTCTTATaGTTCCTGGATCACATTGGA +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSAREVLLL*FLDHIG
Trigger: TCCAATGTGATCCAGGAACAATAAGAGAAGAACTTC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCATTCCAAAGTGCTTGTaGGCCATTTCTGTCAAAATG +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLIPKCL*AISVKM
Trigger: CATTTTGACAGAAATGGCCAACAAGCACTTTGGAAT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGATTCCAAAGTGCTTGTaGGCCATTTCTGTCAAAATG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARIPKCL*AISVKM
Trigger: CATTTTGACAGAAATGGCCAACAAGCACTTTGGAAT...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTATTGCTTCATCTTCTaGCACAACATTACGGACCTG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEYCFIF*HNITDL
Trigger: CAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTTCACCTTTGCTATaGCTTCATCTTCTTGCACAA +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLSPLL*LHLLAQ
Trigger: TTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTTCAGCTTTCACCTTaGCTATTGCTTCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLLQLSP*LLLHLL
Trigger: AAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAG...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGTCAGAGATATCTGCTTaGTCTAAGGAATCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGESEISA*SKESSA
Trigger: AGCACTGGATTCCTTAGACAAAGCAGATATCTCTGA...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTATTTGATCTTCCACTaGCTTCAGCAATGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLYLIFH*LQQCLL
Trigger: AAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCACCTTTAACCCACTCTaGCTTTCCTTGTTTCTTATC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSTFNPL*LSLFLI
Trigger: GATAAGAAACAAGGAAAGCAAGAGTGGGTTAAAGGT...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCACCTTTAACCCACTCTaGCTTTCCTTGTTTCTTATC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLTFNPL*LSLFLI
Trigger: GATAAGAAACAAGGAAAGCAAGAGTGGGTTAAAGGT...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGTTTTCATTGCATCCTaGATCATCTTCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARVFIAS*IIFSAM
Trigger: CATTGCTGAGAAGATGATCAAGGATGCAATGAAAAC...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGGGATCATGTTATACTaGAAACTCAGCTCGTCTATA +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLGIMLY*KLSSSI
Trigger: TATAGACGAGCTGAGTTTCAAGTATAACATGATCCC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGACTGGCTCATAGTTTaGTTTTGGTTCAAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLDWLIV*FWFKVN
Trigger: GTTCACTTTGAACCAAAACAAAACTATGAGCCAGTC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp CAAAGGCCATCTTCTCCCCTGAGTAACCAAAATGCCATTCTCAGTTaGTATCAAGTCTCTGGGCAGTCCATCTGTGTTCCACTGCCGGAT +
Preference number: 5 (lower is better)
Translates to: QRPSSPLSNQNAILS*YQVSGQSICVPLPD
Trigger: ATCCGGCAGTGGAACACAGATGGACTGCCCAGAGACTTGATATCAACTGAGAATGGCATTTTGGTTACTCAGGGGAGAAGATGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp CTTTCCAGCACGTATCAGGCGCGCTTTGGTCAGGGCCATGTTCTTTaGCAGACTTTCTTTCTCATTCACTCCTTTCTCGTACTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LSSTYQARFGQGHVL*QTFFLIHSFLVLVL
Trigger: CAAGACAAGTACGAGAAAGGAGTGAATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGACCAAAGCGCGCCTGATACGTGCTGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp ACACGTTTCCAACGATGTTTGCTAGCTCCTCCTGGAATTTCTCAATaGTTTCTTCCCACCGAACCTGCTCGTCTCCTAATGCAGCCGTTA +
Preference number: 5 (lower is better)
Translates to: TRFQRCLLAPPGISQ*FLPTEPARLLMQPL
Trigger: TAACGGCTGCATTAGGAGACGAGCAGGTTCGGTGGGAAGAAAGCATTGAGAAATTCCAGGAGGAGCTAGCAAACATCGTTGGAAACGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ATAGAATCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATTGGTaGTTGGGAGCCATAGCGGTCCAGCCGGGGCATATTCAGATCATC +
Preference number: 5 (lower is better)
Translates to: IESTKILILPKQFNW*LGAIAVQPGHIQII
Trigger: GATGATCTGAATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ATCATAGAATCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATTaGTGGTTGGGAGCCATAGCGGTCCAGCCGGGGCATATTCAGATC +
Preference number: 5 (lower is better)
Translates to: IIESTKILILPKQFN*WLGAIAVQPGHIQI
Trigger: GATCTGAATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATTCTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ATATTTTCTAGCGTGGTTCTGGAGGGTCCCTGTGAGAAATCCTTGTaGGAAGAAGAACCCCGAAATCCAGAAGGATTTAGGCTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: IFSSVVLEGPCEKSL*EEEPRNPEGFRLSS
Trigger: CGAGGACAGCCTAAATCCTTCTGGATTTCGGGGTTCTTCTTCCCACAAGGATTTCTCACAGGGACCCTCCAGAACCACGCTAGAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTCTCATGTACTATTTaGATGATTTGCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLFSCTI*MICKGS
Trigger: AGACCCCTTGCAAATCATCAAAATAGTACATGAGAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCTGCCCAGATATGTCTaGGATTTCTTGAGCAAAATT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELPRYV*DFLSKI
Trigger: AATTTTGCTCAAGAAATCCAAGACATATCTGGGCAG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGCACGGCTTGCGGATaGCGTGTCTGGGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPCTACG*RVWAKI
Trigger: GATTTTGGCCCAGACACGCAATCCGCAAGCCGTGCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTACATTGCCTCTTGCCTaGAGGCCTTTCCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPTLPLA*RPFPRP
Trigger: TGGCCTGGGGAAAGGCCTCAAGGCAAGAGGCAATGT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCATCTCTCAAAATTTACTaGTTCAAAATCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPSLKIY*FKIFQG
Trigger: GCCCTGGAAGATTTTGAACAAGTAAATTTTGAGAGA...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCTCTCTCAAAATTTACTaGTTCAAAATCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSSLKIY*FKIFQG
Trigger: GCCCTGGAAGATTTTGAACAAGTAAATTTTGAGAGA...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACATGCTGACACAATaGTTACATCCTGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: TQRSLPPHQGRLLDRRGSHMLTQ*LHPVFL
Trigger: AAGAAATACAGGATGTAACAATTGTGTCAGCATGTG...GGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACACATGCTGACACAATaGTTACATCCTGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPHMLTQ*LHPVFL
Trigger: AAGAAATACAGGATGTAACAATTGTGTCAGCATGTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp TCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCCCACAGCTTCTACAATATTaGATGACGTTTGCTTTACTG +
Preference number: 5 (lower is better)
Translates to: SEVTSSSSGKTSGSARLPQLLQY*MTFALL
Trigger: CAGTAAAGCAAACGTCATCAAATATTGTAGAAGCTG...TGGGAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCTTTGTTTCTAGTAGCTaGGTGAGACCATTCTTTACA +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLFVSSS*VRPFFT
Trigger: TGTAAAGAATGGTCTCACCAAGCTACTAGAAACAAA...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGCTTCAGCTTTCACCTTaGCTATTGCTTCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGELQLSP*LLLHLL
Trigger: AAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAG...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAATCCAGTGCTTTATaGGCAGCTTCGAGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPESSAL*AASRAG
Trigger: CCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTGCAAAGTCTTTATTaGATCTTCCACTTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VDSEVTSSSSGKTSGSARLQSLY*IFHLLQ
Trigger: CTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAA...CCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTCCCTGGCAAACCTTaGAAAGGCGCCCATGGGATC +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLPGKP*KGAHGI
Trigger: GATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGTTTTCATTGCATCCTaGATCATCTTCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEVFIAS*IIFSAM
Trigger: CATTGCTGAGAAGATGATCAAGGATGCAATGAAAAC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp AGTCGACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGGGATCATGTTATACTaGAAACTCAGCTCGTCTATA +
Preference number: 5 (lower is better)
Translates to: SRLRGHFLLIREDFWIGEGIMLY*KLSSSI
Trigger: TATAGACGAGCTGAGTTTCAAGTATAACATGATCCC...CTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp GACTCAGAGGTCACTTCCTCCTCATCAGGGAAGACTTCTGGATCGGCGAGGCTCGCTCATAGTTTTGTTTaGGTTCAAAGTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: DSEVTSSSSGKTSGSARLAHSFV*VQSELQ
Trigger: CTGTAGTTCACTTTGAACCAAAACAAAACTATGAGC...GAGCCTCGCCGATCCAGAAGTCTTCCCTGATGAGGAGGAAGTGACCTCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp CTACCGAGTCCTTGTGCTGTTTATGGTATTTTTCCAGCTGGGAACTaGAGAATTGGACATCAGGCTCCTCCTGCTTCAGGGCTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LPSPCAVYGIFPAGN*RIGHQAPPASGLLD
Trigger: ATCTAGAAGCCCTGAAGCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGGACTCGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp CCTTGGACACCTTCTCCACCTTCTCAGGCACGAAGTCAGGATTGTTaGTGTACTTCTGAAGCTTCAACAGGATCTGCGGCTTTATGTTCT +
Preference number: 5 (lower is better)
Translates to: PWTPSPPSQARSQDC*CTSEASTGSAALCS
Trigger: AGAACATAAAGCCGCAGATCCTGTTGAAGCTTCAGAAGTACATCAACAATCCTGACTTCGTGCCTGAGAAGGTGGAGAAGGTGTCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp CTCCTTGTCCATGGGCAGTTCTGTTCCAAATTGAATGTCCTTGGCTaGTTCTATCACTGCAGCTTGGTCTCGGTAGACTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: LLVHGQFCSKLNVLG*FYHCSLVSVDWDHV
Trigger: AACATGATCCCAGTCTACCGAGACCAAGCTGCAGTGATAGAATCAGCCAAGGACATTCAATTTGGAACAGAACTGCCCATGGACAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp ACCATGTCTTTATCATCCCACCGAGAAGCATCCATGAACATTCCATaGACAAGAACCCCATCTTCAGGAGAGGGCAACTCCTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: TMSLSSHREASMNIP*TRTPSSGEGNSLSM
Trigger: CATGGACAAGGAGTTGCCCTCTCCTGAAGATGGGGTTCTTGTTCATGGAATGTTCATGGATGCTTCTCGGTGGGATGATAAAGACATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp ATGCCATCCAGAAAGTCTTCCAAAGAAGGCTCGAAGAGTAGTGATTaGACTGTCAGAATCAGTTCTGTGAGGAACATGGGGACGAGAGAC +
Preference number: 5 (lower is better)
Translates to: MPSRKSSKEGSKSSD*TVRISSVRNMGTRD
Trigger: GTCTCTCGTCCCCATGTTCCTCACAGAACTGATTCTGACAGTGCAATCACTACTCTTCGAGCCTTCTTTGGAAGACTTTCTGGATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp AATCTGGAGAGCTTTGCGGCTTTGGCATTCCTAATGGTGATGAGTTaGTGGGCAATGACCGACAGGACTTCTATGTCAATCCGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: NLESFAALAFLMVMS*WAMTDRTSMSIRLN
Trigger: ATTCAACCGGATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAAGCTCTCCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp CTGGGCATCATCAGCGATCGCTTGAGTCTCTTCAGCTTTCACCTTTaGTATTGCTTCATCTTCTTGCACAACATTACGGACCTGATCAGC +
Preference number: 5 (lower is better)
Translates to: LGIISDRLSLFSFHL*YCFIFLHNITDLIS
Trigger: GCTGATCAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TTCAAAGTGAACTACAGGCAGCATGGGGTTCATCTGTCCTGGCAATaGGTCTTCTATGACCATGTCTTTATCATCCCACCGAGAAGCATC +
Preference number: 5 (lower is better)
Translates to: FKVNYRQHGVHLSWQ*VFYDHVFIIPPRSI
Trigger: GATGCTTCTCGGTGGGATGATAAAGACATGGTCATAGAAGACGCATTGCCAGGACAGATGAACCCCATGCTGCCTGTAGTTCACTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGATGGCGAGGGCTTTaGCTAGGTCTTTGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGWRGL*LGLWWS
Trigger: AGACCACCAAAGACCTAGCAAAAGCCCTCGCCATCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCACAGTGTGGTCACTTaGCTGATGTCCACCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPHSVVT*LMSTCG
Trigger: CCCACAGGTGGACATCAGCAAAGTGACCACACTGTG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGGGACTTGGCTGGGGTaGGCAGGAGATCGACACTCA +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCGTWLG*AGDRHS
Trigger: TGAGTGTCGATCTCCTGCCAACCCCAGCCAAGTCCC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGAATGGCCTGTGGTaGAAAGTGTTCCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLNGLW*KVFLPG
Trigger: CCCGGGCAGGAACACTTTCAACCACAGGCCATTCAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp GCTGGTGAAAGCGTCAAAGTACGAGTCAGGCACCAGATTAGGAACTaGCAACACCGTGTTTTCAAAGTGATTAATTGCCCCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: AGESVKVRVRHQIRN*QHRVFKVINCPRNA
Trigger: GGCATTTCTGGGGCAATTAATCACTTTGAAAACACGGTGTTGTCAGTTCCTAATCTGGTGCCTGACTCGTACTTTGACGCTTTCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp AGCATCGTCTTTATTTTCTCCTGGTCAGCACTGATATCCAAGATCTaGGGGTCCTGTGCCAGCAGCTTGACTTCATTCACCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: SIVFIFSWSALISKI*GSCASSLTSFTSLL
Trigger: CAACAATGAGGTGAATGAAGTCAAGCTGCTGGCACAGGACCCTCAGATCTTGGATATCAGTGCTGACCAGGAGAAAATAAAGACGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TGTTCAGCTTCATTTGTTCCATTGACAAGATATTTCCATCTTTGCTaGGCAGCAGAGACTCCAGCAGGCAGCACAGTGTGGTCACTTTGC +
Preference number: 5 (lower is better)
Translates to: CSASFVPLTRYFHLC*AAETPAGSTVWSLC
Trigger: GCAAAGTGACCACACTGTGCTGCCTGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGAAGCTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CCCTTTTTCTCAGTGACTTCCGGCTTCTCTTCAGTAATCCACTTCTaGATGACGTCTGCTGAGGGAGTTCGCTTTAGTTTATCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PFFSVTSGFSSVIHF*MTSAEGVRFSLSEK
Trigger: CTTCTCAGATAAACTAAAGCGAACTCCCTCAGCAGACGTCATCCAGAAGTGGATTACTGAAGAGAAGCCGGAAGTCACTGAGAAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp TTTTGGTTCAAAGTGAACTACAGGCAGCATGGGGTTCATCTGTCCTaGCAATGCGTCTTCTATGACCATGTCTTTATCATCCCACCGAGA +
Preference number: 5 (lower is better)
Translates to: FWFKVNYRQHGVHLS*QCVFYDHVFIIPPR
Trigger: TCTCGGTGGGATGATAAAGACATGGTCATAGAAGACGCATTGCCAGGACAGATGAACCCCATGCTGCCTGTAGTTCACTTTGAACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAATGGTCAGGATCACTaGAGAAGGGTGGCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPNGQDH*RRVASD
Trigger: ATCGCTGGCCACCCTTCTCAAGTGATCCTGACCATT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCCCTGTGAGAAATCCTaGTGGGAAGAAGAACCCCGA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPPCEKS*WEEEPR
Trigger: TCGGGGTTCTTCTTCCCACAAGGATTTCTCACAGGG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp TCCTCCAACTCAGGCTTTTCAAGTCGCACAACGTCACTTAGCAACTaGTCCTCCAGACCCGATTTAGTTACAGTGAAATTGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSNSGFSSRTTSLSN*SSRPDLVTVKLMMV
Trigger: CACCATCATCAATTTCACTGTAACTAAATCGGGTCTGGAGGATCAGTTGCTAAGTGACGTTGTGCGACTTGAAAAGCCTGAGTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TATTTTTCCAGCTGGGAACTGAAGAATTGGACATCAGGCTCCTCCTaGTTCAGGGCTTCTAGATCCAGACTCTCGTTTTCCTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: YFSSWELKNWTSGSS*FRASRSRLSFSLKN
Trigger: ATTCTTCAAGGAAAACGAGAGTCTGGATCTAGAAGCCCTGAAGCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp TATTTTCTCCTGGTCAGCACTGATATCCAAGATCTGAGGGTCCTGTaGCAGCAGCTTGACTTCATTCACCTCATTGTTGAGATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: YFLLVSTDIQDLRVL*QQLDFIHLIVEIFK
Trigger: CTTGAAGATCTCAACAATGAGGTGAATGAAGTCAAGCTGCTGGCACAGGACCCTCAGATCTTGGATATCAGTGCTGACCAGGAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GAGATTCCAACTTCCTTTGCTTTTGGTCGGGTGGCTGCTAAAACGTaGTCCAACTCGTCCTTCTCAAATAAATTAGGCACTTCACCAGAA +
Preference number: 5 (lower is better)
Translates to: EIPTSFAFGRVAAKT*SNSSFSNKLGTSPE
Trigger: TTCTGGTGAAGTGCCTAATTTATTTGAGAAGGACGAGTTGGAGCACGTTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGTTGGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp ATAGATTTCAGCTGGTTTTTATCGCTGTTGATCCTCACGATTAGCTaGATCCTCTGTTCCTCCAACTCAGGCTTTTCAAGTCGCACAACG +
Preference number: 5 (lower is better)
Translates to: IDFSWFLSLLILTIS*ILCSSNSGFSSRTT
Trigger: CGTTGTGCGACTTGAAAAGCCTGAGTTGGAGGAACAGAGGATCCAGCTAATCGTGAGGATCAACAGCGATAAAAACCAGCTGAAATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTCCTGTGCCAGCAGCTaGACTTCATTCACCTCATTG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSCASS*TSFTSL
Trigger: CAATGAGGTGAATGAAGTCAAGCTGCTGGCACAGGA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTTCTCCACCTTCTGTTaGAGCTGGGGCACCACACTG +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCFSTFC*SWGTTL
Trigger: CAGTGTGGTGCCCCAGCTCAAACAGAAGGTGGAGAA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCGTTAGGCAGCCGGTaGACCTTCCTCATGATTTCC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCALGSR*TFLMIS
Trigger: GGAAATCATGAGGAAGGTCAACCGGCTGCCTAACGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCCGAAGCAGTTCAATaGGTGGTTGGGAGCCATAGC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCAEAVQ*VVGSHS
Trigger: GCTATGGCTCCCAACCACCAATTGAACTGCTTCGGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGCACGCAAGCCTTTaGGAGGCTCATTGGTTACCT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLHASL*EAHWLP
Trigger: AGGTAACCAATGAGCCTCCAAAAGGCTTGCGTGCAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAACTTCAGGAGATTGTaGAACCGGTCCACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPNFRRL*NRSTSW
Trigger: CCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp TTTAATGACTTCTTCTCGGTCATGGAAGGTGTACGTCGGATAAGTTaGAGACCTCATTCCAAAGAGCCCTCTTCTTCCAATACTTGTGCG +
Preference number: 5 (lower is better)
Translates to: FNDFFSVMEGVRRIS*RPHSKEPSSSNTCA
Trigger: CGCACAAGTATTGGAAGAAGAGGGCTCTTTGGAATGAGGTCTTCAACTTATCCGACGTACACCTTCCATGACCGAGAAGAAGTCATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TTTTCAAATGTCGCTGCGTACAAGCGTGCAGAGTCGAACGCTGCGTaGATTGTTTCCTTTATTTGCATGATGATGGTGAGAAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FSNVAAYKRAESNAA*IVSFICMMMVRKFL
Trigger: CAGGAACTTTCTCACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCACGCTTGTACGCAGCGACATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TTCAGGGCTTCTAGATCCAGACTCTCGTTTTCCTTGAAGAATAACTaGAACTTTTCAAATGTCGCTGCGTACAAGCGTGCAGAGTCGAAC +
Preference number: 5 (lower is better)
Translates to: FRASRSRLSFSLKNN*NFSNVAAYKRAESN
Trigger: GTTCGACTCTGCACGCTTGTACGCAGCGACATTTGAAAAGTTTCAGTTATTCTTCAAGGAAAACGAGAGTCTGGATCTAGAAGCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp CACAAAAGTCTGGCACAGTACAGTGTTCAGCTTCATTTGTTCCATTaGCAAGATATTTCCATCTTTGCTGAGCAGCAGAGACTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HKSLAQYSVQLHLFH*QDISIFAEQQRLQQ
Trigger: CTGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGAAGCTGAACACTGTACTGTGCCAGACTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TTCTCCACCTTCTCAGGCACGAAGTCAGGATTGTTGATGTACTTCTaGAGCTTCAACAGGATCTGCGGCTTTATGTTCTCCTTATCGTAT +
Preference number: 5 (lower is better)
Translates to: FSTFSGTKSGLLMYF*SFNRICGFMFSLSY
Trigger: ATACGATAAGGAGAACATAAAGCCGCAGATCCTGTTGAAGCTTCAGAAGTACATCAACAATCCTGACTTCGTGCCTGAGAAGGTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp ACTTCATTCACCTCATTGTTGAGATCTTCAAGGTCCCGACCCAAGTaGAGACAAAACTGTTTGATGCTTGTTTCTCGATCACCCACAGAT +
Preference number: 5 (lower is better)
Translates to: TSFTSLLRSSRSRPK*RQNCLMLVSRSPTD
Trigger: ATCTGTGGGTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCACTTGGGTCGGGACCTTGAAGATCTCAACAATGAGGTGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp CCAGAGCAGTTGTTTGAGCCTGAGTTCAGCACTAACTTCTTCCAATaGATCAAACTTGGACACTTCCACCTTGAAATTCTTCTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: PEQLFEPEFSTNFFQ*IKLGHFHLEILLVG
Trigger: TCCTACCAGAAGAATTTCAAGGTGGAAGTGTCCAAGTTTGATGCATTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAACTGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp ATCATCAGCGATCGCTTGAGTCTCTTCAGCTTTCACCTTTGCTATTaGTTCATCTTCTTGCACAACATTACGGACCTGATCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: IISDRLSLFSFHLCY*FIFLHNITDLISTF
Trigger: GAAAGTGCTGATCAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp GTAGCAGCGATCCTTGGCTTGAACCAGCTCAGAAACTATATCTCTTaGGTGCACATCAATGGTAATCAATGCAGTGATGATGTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: VAAILGLNQLRNYIS*VHINGNQCSDDVSV
Trigger: CACAGAAACATCATCACTGCATTGATTACCATTGATGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGATCGCTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCTGGGAACTGAAGAATaGGACATCAGGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCLGTEE*DIRLLL
Trigger: CAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCATCCACCTTTTTCTaGCTCAAACAGGGAAGCATG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPASTFF*LKQGSM
Trigger: CATGCTTCCCTGTTTGAGCAAGAAAAAGGTGGATGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGGGCAAACTCGAGCTTaGAAATGGAGTCGAAGCATT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPGQTRA*KWSRSI
Trigger: AATGCTTCGACTCCATTTCAAAGCTCGAGTTTGCCC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGGAAGAACACCAGCTaGACTTCCTTAGGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPWKNTS*TSLGFV
Trigger: CACAAACCCTAAGGAAGTCAAGCTGGTGTTCTTCCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTCCACACCAGCCATCTaGTACAATTTCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPSTPAI*YNFLRS
Trigger: AGACCTGAGGAAATTGTACAAGATGGCTGGTGTGGA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATGGATTTGCAGGCCTaGGACACCTTCTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCMDLQA*DTFSTF
Trigger: GAAGGTGGAGAAGGTGTCCAAGGCCTGCAAATCCAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCACATGCACATGGATTaGCAGGCCTTGGACACCTTC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCHMHMD*QALDTF
Trigger: GAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGTG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGCGTTCATGCAGGTaGTCACTCTTCTCAGATGTT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRRSCR*SLFSDV
Trigger: AACATCTGAGAAGAGTGACAACCTGCATGAACGCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTCTTGTCCCAGAGAAATaGACTGCACTCGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLVPEK*TALVLH
Trigger: ATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAAG...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp GAGTCAGGCACCAGATTAGGAACTGACAACACCGTGTTTTCAAAGTaGTTAATTGCCCCAGAAATGCCATCCAGAAAGTCTTCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: ESGTRLGTDNTVFSK*LIAPEMPSRKSSKE
Trigger: TTCTTTGGAAGACTTTCTGGATGGCATTTCTGGGGCAATTAATCACTTTGAAAACACGGTGTTGTCAGTTCCTAATCTGGTGCCTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 90 bp TGTTTATGTCTTCAAGGAACTCTTCGACGACGATCTGGGTGTCTGTaGAAAGGAAAACCATATCTTTGTCTTCCACACCAGCCATCTTGT +
Preference number: 5 (lower is better)
Translates to: CLCLQGTLRRRSGCL*KGKPYLCLPHQPSC
Trigger: ACAAGATGGCTGGTGTGGAAGACAAAGATATGGTTTTCCTTTTCACAGACACCCAGATCGTCGTCGAAGAGTTCCTTGAAGACATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAGGGCTACCGAGTCCTaGTGCTGTTTATGGTATTTT +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPRATES*CCLWYF
Trigger: AAAATACCATAAACAGCACAAGGACTCGGTAGCCCT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCACCTGTGGGATAGCTaGGGTGCACTTTTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCHLWDS*GALFVH
Trigger: GTGAACAAAAAGTGCACCCAAGCTATCCCACAGGTG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGTTCCTGGATCACATaGGAGAATACCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPCSWIT*ENTLHT
Trigger: TGTGTGCAAGGTATTCTCCAATGTGATCCAGGAACA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp AAGCCCTTTTCCAGCTGGGTCACAAATTTAGCGTATTTAGTAACTTaGCTGTTTAGGACTTCTGGATCCAGGCAGTCAAATTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: KPFSSWVTNLAYLVT*LFRTSGSRQSNLDF
Trigger: GAAGTCCAAATTTGACTGCCTGGATCCAGAAGTCCTAAACAGTCAAGTTACTAAATACGCTAAATTTGTGACCCAGCTGGAAAAGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 90 bp AAACTTTTCAAATGTCGCTGCGTACAAGCGTGCAGAGTCGAACGCTaGGTGAATTGTTTCCTTTATTTGCATGATGATGGTGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: KLFKCRCVQACRVER*VNCFLYLHDDGEKV
Trigger: AACTTTCTCACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCACGCTTGTACGCAGCGACATTTGAAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 90 bp CATGACCTCCACAATTGTCGACTGCAAAATACCATAGTCATGTTCTaGGATTTGGACTCCAGGAAAAAGATCAGATATGATCCCACTGAA +
Preference number: 5 (lower is better)
Translates to: HDLHNCRLQNTIVMF*DLDSRKKIRYDPTE
Trigger: TTCAGTGGGATCATATCTGATCTTTTTCCTGGAGTCCAAATCCCAGAACATGACTATGGTATTTTGCAGTCGACAATTGTGGAGGTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTCCACACCAGCCATCTaGTACAATTTCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSTPAI*YNFLRS
Trigger: AGACCTGAGGAAATTGTACAAGATGGCTGGTGTGGA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCAACTTCCTTTGCTTTaGGTCGGGTGGCTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCQLPLL*VGWLLK
Trigger: TTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGTTG...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTATTGCTTCATCTTCTaGCACAACATTACGGACCTG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPYCFIF*HNITDL
Trigger: CAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTAAATGCCATTCTCAGTaGATATCAAGTCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPKCHSQ*ISSLWA
Trigger: TGCCCAGAGACTTGATATCAACTGAGAATGGCATTT...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp GTTTCATACAGCTGTATCACCTTTTTGACCATACATAACTCAGGCTaGAGGTTCTGGTTAATCATGACCTCCACAATTGTCGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: VSYSCITFLTIHNSG*RFWLIMTSTIVDCK
Trigger: TTTGCAGTCGACAATTGTGGAGGTCATGATTAACCAGAACCTTCAGCCTGAGTTATGTATGGTCAAAAAGGTGATACAGCTGTATGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAGGGCTACCGAGTCCTaGTGCTGTTTATGGTATTTT +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCRATES*CCLWYF
Trigger: AAAATACCATAAACAGCACAAGGACTCGGTAGCCCT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTGCAGACAAAACTGTTaGATGCTTGTTTCTCGATCA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPCRQNC*MLVSRS
Trigger: TGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGAAGTTCTTCTCTTATaGTTCCTGGATCACATTGGA +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPEVLLL*FLDHIG
Trigger: TCCAATGTGATCCAGGAACAATAAGAGAAGAACTTC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGGTTTTTATCGCTGTaGATCCTCACGATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCWFLSL*ILTISW
Trigger: CCAGCTAATCGTGAGGATCAACAGCGATAAAAACCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCATTAACTTCAGGAGATaGTTGAACCGGTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCINFRR*LNRSTS
Trigger: GGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAAT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp TCGATTGTTGTGTTGAACAACTGTTTAAAATATTTCAGTGAATACTaGTACATGGGGTCGATTTCCGAGAGGCTGGCTATGACGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SIVVLNNCLKYFSEY*YMGSISERLAMTKY
Trigger: GTACTTCGTCATAGCCAGCCTCTCGGAAATCGACCCCATGTATCAGTATTCACTGAAATATTTTAAACAGTTGTTCAACACAACAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGCAATTCCAAAGTGCTaGTTGGCCATTTCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCAIPKC*LAISVK
Trigger: TTTGACAGAAATGGCCAACAAGCACTTTGGAATTGC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTTTGCAAAGTCTTTATTaGATCTTCCACTTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPLQSLY*IFHLLQ
Trigger: CTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAA...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp CAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCCATCCTGCTCATAGTTTTGTTTaGGTTCAAAGTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: QNDFILGHGRNNSHSCHPAHSFV*VQSELQ
Trigger: CTGTAGTTCACTTTGAACCAAAACAAAACTATGAGC...AGGATGGCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS TCA 90 bp AGATGTTTCGATTGTTGTGTTGAACAACTGTTTAAAATATTTCAGTaGATACTGATACATGGGGTCGATTTCCGAGAGGCTGGCTATGAC +
Preference number: 5 (lower is better)
Translates to: RCFDCCVEQLFKIFQ*ILIHGVDFREAGYD
Trigger: GTCATAGCCAGCCTCTCGGAAATCGACCCCATGTATCAGTATTCACTGAAATATTTTAAACAGTTGTTCAACACAACAATCGAAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTGCAGACAAAACTGTTaGATGCTTGTTTCTCGATCA +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCCRQNC*MLVSRS
Trigger: TGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCAGCAGTTTCAGGATTTaGTCTTCGATAGATTTCAGC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCSSFRI*SSIDFS
Trigger: GCTGAAATCTATCGAAGACAAAATCCTGAAACTGCT...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCGACTGGCTCATAGTTTaGTTTTGGTTCAAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCDWLIV*FWFKVN
Trigger: GTTCACTTTGAACCAAAACAAAACTATGAGCCAGTC...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS CCA 90 bp TGTTCTCATAACTTACGACCTTTAGATTATATGTATCGTATTCTATaGAAGACTTGGGTACGGCAGAGATCATGTAAAGGAATCCGAGAT +
Preference number: 5 (lower is better)
Translates to: CSHNLRPLDYMYRIL*KTWVRQRSCKGIRD
Trigger: ATCTCGGATTCCTTTACATGATCTCTGCCGTACCCAAGTCTTCCATAGAATACGATACATATAATCTAAAGGTCGTAAGTTATGAGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS-3UTR CAA 90 bp ATAACTCAAAACGACTTTATTTTAGGTCATGGGAGAAATAACAGCCACAGCTGCTTTGTTTCTAGTAGCTaGGTGAGACCATTCTTTACA +
Preference number: 5 (lower is better)
Translates to: ITQNDFILGHGRNNSHSCFVSSS*VRPFFT
Trigger: TGTAAAGAATGGTCTCACCAAGCTACTAGAAACAAA...GCAGCTGTGGCTGTTATTTCTCCCATGACCTAAAATAAAGTCGTTTTGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
CDS GCA 72 bp GCTCCAGGTAGGAGGTGGGCGTGGTGTAGTAGCGCCTaGGCAGTTCGTTGTAGTAACGCTCCGCCATGTGGG +
Preference number: 6 (lower is better)
Translates to: APGRRWAWCSSA*AVRCSNAPPCG
Trigger: CCCACATGGCGGAGCGTTACTACAACGAACTGCGCAGGCGCTACTACACCACGCCCACCTCCTACCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CAGTGTCCACTAGGAGGGCGTCGACGGTTTGCTCAATaGCTGCCCAGTGCCGGGCTTTCAGGGTTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: QCPLGGRRRFAQ*LPSAGLSGLGS
Trigger: GGAACCCAACCCTGAAAGCCCGGCACTGGGCAGCCATTGAGCAAACCGTCGACGCCCTCCTAGTGGACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CGAGAACCACATCTGAATGGGCAGCCAGGGGGCTTCTaGCTTGGGAGGGCGCTCCTTCTCCATCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: REPHLNGQPGGF*LGRALLLHPCR
Trigger: TCTGCAGGGATGGAGAAGGAGCGCCCTCCCAAGCCAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GAGAGGCTGGCTATGACGAAGTACATCACGGAGCCCTaGGTGGCCACCGGGCGGTACCTCTCTCGAGCTATG +
Preference number: 6 (lower is better)
Translates to: ERLAMTKYITEP*VATGRYLSRAM
Trigger: CATAGCTCGAGAGAGGTACCGCCCGGTGGCCACTCAGGGCTCCGTGATGTACTTCGTCATAGCCAGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GCTTTCCCGTGCCTCCTACACCAACCAGCAGCGCGTTaGCCCTTTCCTGGCGGATCATCCGTGCAATTCTGG +
Preference number: 6 (lower is better)
Translates to: AFPCLLHQPAAR*PFPGGSSVQFW
Trigger: CCAGAATTGCACGGATGATCCGCCAGGAAAGGGGCAACGCGCTGCTGGTTGGTGTAGGAGGCACGGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GGCTTCTGGCTTGGGAGGGCGCTCCTTCTCCATCCCTaGAGAACCTCGGAGGAAGAAATTCCACTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: GFWLGRALLLHP*RTSEEEIPLGL
Trigger: GAGGCCGAGTGGAATTTCTTCCTCCGAGGTTCTGCAGGGATGGAGAAGGAGCGCCCTCCCAAGCCAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CTGGTGCGCCTCCGAGGTCAAGCTGCAAAGCCCCCATaGGGCAAAGGTAGCAGCGATCCTTGGCTTGAACCA +
Preference number: 6 (lower is better)
Translates to: LVRLRGQAAKPP*GKGSSDPWLEP
Trigger: TGGTTCAAGCCAAGGATCGCTGCTACCTTTGCCTCATGGGGGCTTTGCAGCTTGACCTCGGAGGCGCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114040.8
CDS GCA 72 bp AGGAGGGCGTCGACGGTTTGCTCAATGGCTGCCCAGTaGCGGGCTTTCAGGGTTGGGTTCCTCAAGTCAATG +
Preference number: 6 (lower is better)
Translates to: RRASTVCSMAAQ*RAFRVGFLKSM
Trigger: CATTGACTTGAGGAACCCAACCCTGAAAGCCCGGCACTGGGCAGCCATTGAGCAAACCGTCGACGCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CCTCCTACACCAACCAGCAGCGCGTTGCCCCTTTCCTaGCGGATCATCCGTGCAATTCTGGACACGTGCTCT +
Preference number: 6 (lower is better)
Translates to: PPTPTSSALPLS*RIIRAILDTCS
Trigger: AGAGCACGTGTCCAGAATTGCACGGATGATCCGCCAGGAAAGGGGCAACGCGCTGCTGGTTGGTGTAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTCCACTTCCTGGCCAAGGACGGTGGTCAGAGAGTTCAGGCGTCCTaGAGGGTCCTTGACAAAAAGGCTCTCGGAAGCACCCTCCATCTG +
Preference number: 6 (lower is better)
Translates to: VHFLAKDGGQRVQAS*RVLDKKALGSTLHL
Trigger: CAGATGGAGGGTGCTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCTCTGACCACCGTCCTTGGCCAGGAAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GATGGTGAGAAAGTTCCTGTCATCCTCAAACACGGCTaGCAGGTTGGGCCCGGGCCCGCAGGTCTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: DGEKVPVILKHG*QVGPGPAGLFL
Trigger: GAGGAAAAGACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGTTTGAGGATGACAGGAACTTTCTCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GAGGCCTTTCCCCAGGCCAACCCGTTCCCCCTCAGGTaGCAGCATTGCCAAGATGTCGTTGGTGAAGACCTT +
Preference number: 6 (lower is better)
Translates to: EAFPQANPFPLR*QHCQDVVGEDL
Trigger: AAGGTCTTCACCAACGACATCTTGGCAATGCTGTCACCTGAGGGGGAACGGGTTGGCCTGGGGAAAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp AGTTTACCAGGGAGGGAAACATCCGGCATCGGGACCTaGAGGCCTCGCCAACCGGGCTCATGCAGAGAACTA +
Preference number: 6 (lower is better)
Translates to: SLPGRETSGIGT*RPRQPGSCREL
Trigger: TAGTTCTCTGCATGAGCCCGGTTGGCGAGGCCTTCAGGTCCCGATGCCGGATGTTTCCCTCCCTGGTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GAGTGGCCACCGGGCGGTACCTCTCTCGAGCTATGTTaGTCATCAGCTCTGTGGACTCTGCTTCCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: EWPPGGTSLELC*SSALWTLLPSA
Trigger: GGCTGAAGGAAGCAGAGTCCACAGAGCTGATGATCAACATAGCTCGAGAGAGGTACCGCCCGGTGGCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TGGCCAAGGACGGTGGTCAGAGAGTTCAGGCGTCCTTaGGGGTCCTTGACAAAAAGGCTCTCGGAAGCACCC +
Preference number: 6 (lower is better)
Translates to: WPRTVVREFRRP*GSLTKRLSEAP
Trigger: GGGTGCTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCTCTGACCACCGTCCTTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp CACCGCAGCGGTGATGGGATCAGCTTCTCCTTCAGCTaGTTGGTGTCGATAAGCAGCAGGCCTACGTTTCGG +
Preference number: 6 (lower is better)
Translates to: HRSGDGISFSFS*LVSISSRPTFR
Trigger: CCGAAACGTAGGCCTGCTGCTTATCGACACCAAGCAGCTGAAGGAGAAGCTGATCCCATCACCGCTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ATCCAGTGCTTTATTGGCAGCTTCGAGGGCGGGGAGTaGCTCCTCCAGGTCTCTCTGGGCATCATCAGCGAT +
Preference number: 6 (lower is better)
Translates to: IQCFIGSFEGGE*LLQVSLGIISD
Trigger: ATCGCTGATGATGCCCAGAGAGACCTGGAGGAGGCACTCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GCAATGGGGCCCTGCCCTTGTCCCAGAGAAATTGACTaGACTCGTTCTGCATACCCGCTCTCCCTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: AMGPCPCPREID*TRSAYPLSLAN
Trigger: GTTTGCCAGGGAGAGCGGGTATGCAGAACGAGTGCAGTCAATTTCTCTGGGACAAGGGCAGGGCCCCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CTTGAGAAGGGTGGCCAGCGATCACCCACTCTGTCCTaGGTTTCCCCTGGTAATCAGCGATGGCAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: LEKGGQRSPTLS*VSPGNQRWQLC
Trigger: GCAAAGCTGCCATCGCTGATTACCAGGGGAAACCCAGGACAGAGTGGGTGATCGCTGGCCACCCTTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp ACTCTTCTAGATCACAGCACGAGAACCACATCTGAATaGGCAGCCAGGGGGCTTCTGGCTTGGGAGGGCGCT +
Preference number: 6 (lower is better)
Translates to: TLLDHSTRTTSE*AARGLLAWEGA
Trigger: AGCGCCCTCCCAAGCCAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTGCTGTGATCTAGAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TTGCTTTTGCCCTGGCCGCCAGAGGAGGACCTTGGCTaGACCTCAAGGATGGTGGTGATCAGAGTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: LLLPWPPEEDLG*TSRMVVIRVLV
Trigger: GACCAACACTCTGATCACCACCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CGCAGCGGTGATGGGATCAGCTTCTCCTTCAGCTGCTaGGTGTCGATAAGCAGCAGGCCTACGTTTCGGGTG +
Preference number: 6 (lower is better)
Translates to: RSGDGISFSFSC*VSISSRPTFRV
Trigger: CACCCGAAACGTAGGCCTGCTGCTTATCGACACCAAGCAGCTGAAGGAGAAGCTGATCCCATCACCGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp ATGCTGAAGTGTCGGATGAAGCGGGGTGTCACAGGATaGCGTCCCCCTCCTGGAGGTGCACATGCTGACACA +
Preference number: 6 (lower is better)
Translates to: MLKCRMKRGVTG*RPPPGGAHADT
Trigger: TGTGTCAGCATGTGCACCTCCAGGAGGGGGACGCAATCCTGTGACACCCCGCTTCATCCGACACTTCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GCTGACAGGTTGGGCCCGGGCCCGCAGGTCTTTTCCTCAACCTTCTaGTTAATGAACGGGCTGGTGAAAGCGTCAAAGTACGAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: ADRLGPGPQVFSSTF*LMNGLVKASKYESG
Trigger: GCCTGACTCGTACTTTGACGCTTTCACCAGCCCGTTCATTAACAAGAAGGTTGAGGAAAAGACCTGCGGGCCCGGGCCCAACCTGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CAAAGCAGCACCAGGCCCCTGACTGTGCCAAGCCACTaGAGAAGCGCCCCATCATCTTGTAGTCCAAACCGT +
Preference number: 6 (lower is better)
Translates to: QSSTRPLTVPSH*RSAPSSCSPNR
Trigger: ACGGTTTGGACTACAAGATGATGGGGCGCTTCTTCAGTGGCTTGGCACAGTCAGGGGCCTGGTGCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp ACTGATACATGGGGTCGATTTCCGAGAGGCTGGCTATaGCGAAGTACATCACGGAGCCCTGAGTGGCCACCG +
Preference number: 6 (lower is better)
Translates to: TDTWGRFPRGWL*RSTSRSPEWPP
Trigger: CGGTGGCCACTCAGGGCTCCGTGATGTACTTCGTCATAGCCAGCCTCTCGGAAATCGACCCCATGTATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GCTCGAAGAGTCCCCGAGACACATTGGTGTAGGCAGTaGGGAGGGTCTGCTGCAGGAGGATTTTCAGGCGTT +
Preference number: 6 (lower is better)
Translates to: ARRVPETHWCRQ*GGSAAGGFSGV
Trigger: AACGCCTGAAAATCCTCCTGCAGCAGACCCTCCTCACTGCCTACACCAATGTGTCTCGGGGACTCTTCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GCCTGTGCTCAAGATAAAGACCAGGGGCGTGCTGTTTaGCATGTCCTGGTACAGAGTGGCCAGGTCCACTGG +
Preference number: 6 (lower is better)
Translates to: ACAQDKDQGRAV*HVLVQSGQVHW
Trigger: CCAGTGGACCTGGCCACTCTGTACCAGGACATGTCAAACAGCACGCCCCTGGTCTTTATCTTGAGCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp ACTCGTTCTGCATACCCGCTCTCCCTGGCAAACCTTTaGAAGGCGCCCATGGGATCAGAGCCTGTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: TRSAYPLSLANL*KAPMGSEPVLK
Trigger: CTTGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAGAGCGGGTATGCAGAACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CGGTGGTCAGAGAGTTCAGGCGTCCTTGAGGGTCCTTaGCAAAAAGGCTCTCGGAAGCACCCTCCATCTGCA +
Preference number: 6 (lower is better)
Translates to: RWSESSGVLEGP*QKGSRKHPPSA
Trigger: TGCAGATGGAGGGTGCTTCCGAGAGCCTTTTTGTCAAGGACCCTCAAGGACGCCTGAACTCTCTGACCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TTCCAGGCGCTCTGTCACCTCCTGCAGTCGCACTATTaGTGCAGCCTTGAACTCCTGCAGGGTGTAGGTGTG +
Preference number: 6 (lower is better)
Translates to: FQALCHLLQSHY*CSLELLQGVGV
Trigger: CACACCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTGCAGGAGGTGACAGAGCGCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGAAAGTTCCTGTCATCCTCAAACACGGCTGACAGGTaGGGCCCGGGCCCGCAGGTCTTTTCCTCAACCTTC +
Preference number: 6 (lower is better)
Translates to: RKFLSSSNTADR*GPGPQVFSSTF
Trigger: GAAGGTTGAGGAAAAGACCTGCGGGCCCGGGCCCAACCTGTCAGCCGTGTTTGAGGATGACAGGAACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TCGGCTGACCGTGGCAGGAGAGGCCACCCTGAGGTCTaGTACCTCAAAAAGCATGTGGATCTGAGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: SADRGRRGHPEV*YLKKHVDLRCE
Trigger: CTCACACCTCAGATCCACATGCTTTTTGAGGTACAAGACCTCAGGGTGGCCTCTCCTGCCACGGTCAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CACTCGTTCTGCATACCCGCTCTCCCTGGCAAACCTTaGAAAGGCGCCCATGGGATCAGAGCCTGTGCTCAA +
Preference number: 6 (lower is better)
Translates to: HSFCIPALPGKP*KGAHGIRACAQ
Trigger: TTGAGCACAGGCTCTGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAGAGCGGGTATGCAGAACGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GAAGCCACAAGCTCCTGGACAATTTCATCATTGCTTTaGCCCTGGCCGCCAGAGGAGGACCTTGGCTGGACC +
Preference number: 6 (lower is better)
Translates to: EATSSWTISSLL*PWPPEEDLGWT
Trigger: GGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCGAGCTTTGAAATGGAGTCGAAGCATTTCCTTAGGTaGGGCTGCACGGCTTGCGGATTGCGTGTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SSFEMESKHFLR*GCTACGLRVWA
Trigger: GGCCCAGACACGCAATCCGCAAGCCGTGCAGCCTCACCTAAGGAAATGCTTCGACTCCATTTCAAAGCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp ATAGCGCAGTTGCCGCTGCCAGTCGAAGGAGTCGGCTaGGTCGACCTTGGCTTGAACCAGCTCAGAAACTAT +
Preference number: 6 (lower is better)
Translates to: IAQLPLPVEGVG*VDLGLNQLRNY
Trigger: ATAGTTTCTGAGCTGGTTCAAGCCAAGGTCGACTCAGCCGACTCCTTCGACTGGCAGCGGCAACTGCGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS TCA 72 bp AATGACTCTTCTAGATCACAGCACGAGAACCACATCTaGATGGGCAGCCAGGGGGCTTCTGGCTTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: NDSSRSQHENHI*MGSQGASGLGG
Trigger: CCCTCCCAAGCCAGAAGCCCCCTGGCTGCCCATTCAGATGTGGTTCTCGTGCTGTGATCTAGAAGAGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp TCAGCCAGGAAGCCATTCAAGATGGCCTGGAATATCTaGTTCAGACTGTGCTCCGAGGGCATCGGGAGACAC +
Preference number: 6 (lower is better)
Translates to: SARKPFKMAWNI*FRLCSEGIGRH
Trigger: GTGTCTCCCGATGCCCTCGGAGCACAGTCTGAAGCAGATATTCCAGGCCATCTTGAATGGCTTCCTGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp CCACCCGAGAGTACAGATCCATGGCTCTCACCCACATaGACATGGATTTGCAGGCCTTGGACACCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PPESTDPWLSPT*TWICRPWTPSP
Trigger: TGGAGAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGTGGGTGAGAGCCATGGATCTGTACTCTCGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp CCTCGGAGGAAGAAATTCCACTCGGCCTCCGTTAGCTaGTCATGCTCGCGCATGATGTCAACACAGAGCATG +
Preference number: 6 (lower is better)
Translates to: PRRKKFHSASVS*SCSRMMSTQSM
Trigger: CATGCTCTGTGTTGACATCATGCGCGAGCATGAGCAGCTAACGGAGGCCGAGTGGAATTTCTTCCTCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AAGCCACAAGCTCCTGGACAATTTCATCATTGCTTTTaGCCTGGCCGCCAGAGGAGGACCTTGGCTGGACCT +
Preference number: 6 (lower is better)
Translates to: KPQAPGQFHHCF*PGRQRRTLAGP
Trigger: AGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp GCCGCTGCCAGTCGAAGGAGTCGGCTGAGTCGACCTTaGCTTGAACCAGCTCAGAAACTATATCTCTTGCGT +
Preference number: 6 (lower is better)
Translates to: AAASRRSRLSRP*LEPAQKLYLLR
Trigger: ACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGTCGACTCAGCCGACTCCTTCGACTGGCAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS CCA 72 bp TGGCTCTCACCCACATGCACATGGATTTGCAGGCCTTaGACACCTTCTCCACCTTCTCAGGCACGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: WLSPTCTWICRP*TPSPPSQARSQ
Trigger: CTGACTTCGTGCCTGAGAAGGTGGAGAAGGTGTCCAAGGCCTGCAAATCCATGTGCATGTGGGTGAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp ATCATTGCTTTTGCCCTGGCCGCCAGAGGAGGACCTTaGCTGGACCTCAAGGATGGTGGTGATCAGAGTGTT +
Preference number: 6 (lower is better)
Translates to: IIAFALAARGGP*LDLKDGGDQSV
Trigger: AACACTCTGATCACCACCATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTTGTGGGGACAAGCATCTCAAAGAATGGGACATCCCTGCTGTACTaGAAGGTGGGTATAATGCGCTCCCAGGGGTCCAGGCGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: VVGTSISKNGTSLLY*KVGIMRSQGSRRLV
Trigger: CACCAAACGCCTGGACCCCTGGGAGCGCATTATACCCACCTTCAAGTACAGCAGGGATGTCCCATTCTTTGAGATGCTTGTCCCCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp AGACACAGCATGCTGAAGTGTCGGATGAAGCGGGGTGTCACAGGATaGCGTCCCCCTCCTGGAGGTGCACATGCTGACACAATTGTTACA +
Preference number: 6 (lower is better)
Translates to: RHSMLKCRMKRGVTG*RPPPGGAHADTIVT
Trigger: TGTAACAATTGTGTCAGCATGTGCACCTCCAGGAGGGGGACGCAATCCTGTGACACCCCGCTTCATCCGACACTTCAGCATGCTGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTCTGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATTGCTTTaGCCCTGGCCGCCAGAGGAGGACCTTGGCTGGACCTCAAGGATG +
Preference number: 6 (lower is better)
Translates to: VWIEATSSWTISSLL*PWPPEEDLGWTSRM
Trigger: CATCCTTGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACTCTGGTCTGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATaGCTTTTGCCCTGGCCGCCAGAGGAGGACCTTGGCTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: TLVWIEATSSWTISS*LLPWPPEEDLGWTS
Trigger: TGAGGTCCAGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCCACTTCCGGAAGAGAGCGAAGATGGGGATCTTCGTaGGCTCTCTGTGGTACAGGTACTCCTGTTCCCATC +
Preference number: 6 (lower is better)
Translates to: STSGRERRWGSS*ALCGTGTPVPI
Trigger: GATGGGAACAGGAGTACCTGTACCACAGAGAGCTCACGAAGATCCCCATCTTCGCTCTCTTCCGGAAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CCCCCTCAGGTGACAGCATTGCCAAGATGTCGTTGGTaGAGACCTTTTCTGGCTCAGTATCCATGCCGGGTA +
Preference number: 6 (lower is better)
Translates to: PPQVTALPRCRW*RPFLAQYPCRV
Trigger: TACCCGGCATGGATACTGAGCCAGAAAAGGTCTTCACCAACGACATCTTGGCAATGCTGTCACCTGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCCCAGGGGTCCAGGCGTTTGGTGTCAAAGTCTATATaGATGCTCCACAGATCTCCAGAGCTGGGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: SQGSRRLVSKSI*MLHRSPELGSL
Trigger: CAGGCTTCCCAGCTCTGGAGATCTGTGGAGCATTCATATAGACTTTGACACCAAACGCCTGGACCCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GGATTGAAGCCACAAGCTCCTGGACAATTTCATCATTaGTTTTGCCCTGGCCGCCAGAGGAGGACCTTGGCT +
Preference number: 6 (lower is better)
Translates to: GLKPQAPGQFHH*FCPGRQRRTLA
Trigger: AGCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp GTCGGAGAAGGAGAGAACACATCTGCAGAGGGTCGATaGACCTGTTTCCTTTTCACAGCTTCTTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: VGEGENTSAEGR*TCFLFTASWAS
Trigger: CGAGGCCCAAGAAGCTGTGAAAAGGAAACAGGTCCATCGACCCTCTGCAGATGTGTTCTCTCCTTCTCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATTaGTGGTTGGGAGCCATAGCGGTCCAGCCGGGGCAT +
Preference number: 6 (lower is better)
Translates to: STKILILPKQFN*WLGAIAVQPGH
Trigger: ATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AAATTGACTGCACTCGTTCTGCATACCCGCTCTCCCTaGCAAACCTTTGAAAGGCGCCCATGGGATCAGAGC +
Preference number: 6 (lower is better)
Translates to: KLTALVLHTRSP*QTFERRPWDQS
Trigger: GCTCTGATCCCATGGGCGCCTTTCAAAGGTTTGCCAGGGAGAGCGGGTATGCAGAACGAGTGCAGTCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TTGGGCCCGGGCCCGCAGGTCTTTTCCTCAACCTTCTaGTTAATGAACGGGCTGGTGAAAGCGTCAAAGTAC +
Preference number: 6 (lower is better)
Translates to: LGPGPQVFSSTF*LMNGLVKASKY
Trigger: GTACTTTGACGCTTTCACCAGCCCGTTCATTAACAAGAAGGTTGAGGAAAAGACCTGCGGGCCCGGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CGTTCCCCCTCAGGTGACAGCATTGCCAAGATGTCGTaGGTGAAGACCTTTTCTGGCTCAGTATCCATGCCG +
Preference number: 6 (lower is better)
Translates to: RSPSGDSIAKMS*VKTFSGSVSMP
Trigger: CGGCATGGATACTGAGCCAGAAAAGGTCTTCACCAACGACATCTTGGCAATGCTGTCACCTGAGGGGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp ATCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATaGGTGGTTGGGAGCCATAGCGGTCCAGCCGGGGCA +
Preference number: 6 (lower is better)
Translates to: IHQNLDTAEAVQ*VVGSHSGPAGA
Trigger: TGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GAGATATCTGCTTTGTCTAAGGAATCCAGTGCTTTATaGGCAGCTTCGAGGGCGGGGAGTGCCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: EISALSKESSAL*AASRAGSASSR
Trigger: CCTGGAGGAGGCACTCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATTCCTTAGACAAAGCAGATATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TGGATTGAAGCCACAAGCTCCTGGACAATTTCATCATaGCTTTTGCCCTGGCCGCCAGAGGAGGACCTTGGC +
Preference number: 6 (lower is better)
Translates to: WIEATSSWTISS*LLPWPPEEDLG
Trigger: GCCAAGGTCCTCCTCTGGCGGCCAGGGCAAAAGCAATGATGAAATTGTCCAGGAGCTTGTGGCTTCAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TGCCAGTCGAAGGAGTCGGCTGAGTCGACCTTGGCTTaGACCAGCTCAGAAACTATATCTCTTGCGTGCACA +
Preference number: 6 (lower is better)
Translates to: CQSKESAESTLA*TSSETISLACT
Trigger: TGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGTCGACTCAGCCGACTCCTTCGACTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS GCA 72 bp CTTTCCTGGCGGATCATCCGTGCAATTCTGGACACGTaGTCTATGGCATCCTGGAAGAACACCAGCTTGACT +
Preference number: 6 (lower is better)
Translates to: LSWRIIRAILDT*SMASWKNTSLT
Trigger: AGTCAAGCTGGTGTTCTTCCAGGATGCCATAGAGCACGTGTCCAGAATTGCACGGATGATCCGCCAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AGGAAGAAATTCCACTCGGCCTCCGTTAGCTGCTCATaGTCGCGCATGATGTCAACACAGAGCATGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RKKFHSASVSCS*SRMMSTQSMKL
Trigger: CAGCTTCATGCTCTGTGTTGACATCATGCGCGAGCATGAGCAGCTAACGGAGGCCGAGTGGAATTTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AAGAGAGCGAAGATGGGGATCTTCGTGAGCTCTCTGTaGTACAGGTACTCCTGTTCCCATCGCTCAATCTCG +
Preference number: 6 (lower is better)
Translates to: KRAKMGIFVSSL*YRYSCSHRSIS
Trigger: CGAGATTGAGCGATGGGAACAGGAGTACCTGTACCACAGAGAGCTCACGAAGATCCCCATCTTCGCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CACCTTCTGTTTGAGCTGGGGCACCACACTGTTAGGTaGCAAGCCCTTTTCCAGCTGGGTCACAAATTTAGC +
Preference number: 6 (lower is better)
Translates to: HLLFELGHHTVR*QALFQLGHKFS
Trigger: GCTAAATTTGTGACCCAGCTGGAAAAGGGCTTGCCACCTAACAGTGTGGTGCCCCAGCTCAAACAGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AGATATCTGCTTTGTCTAAGGAATCCAGTGCTTTATTaGCAGCTTCGAGGGCGGGGAGTGCCTCCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RYLLCLRNPVLY*QLRGRGVPPPG
Trigger: ACCTGGAGGAGGCACTCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATTCCTTAGACAAAGCAGATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AAGTTCAGCCTGGGCAGCACGGAGCTTCTGTCTCTTTaGTTCAACTTCCTTGACCACCCGAGAGTACAGATC +
Preference number: 6 (lower is better)
Translates to: KFSLGSTELLSL*FNFLDHPRVQI
Trigger: GATCTGTACTCTCGGGTGGTCAAGGAAGTTGAACCAAAGAGACAGAAGCTCCGTGCTGCCCAGGCTGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CAGCCGTTAGCTTTCCAGCACGTATCAGGCGCGCTTTaGTCAGGGCCATGTTCTTTGCCAGACTTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: QPLAFQHVSGAL*SGPCSLPDFLS
Trigger: AGAAAGAAAGTCTGGCAAAGAACATGGCCCTGACCAAAGCGCGCCTGATACGTGCTGGAAAGCTAACGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TCGGAAAACTTCCAGGCGCTCTGTCACCTCCTGCAGTCGCACTATTaGTGCAGCCTTGAACTCCTGCAGGGTGTAGGTGTGGAATTTTTC +
Preference number: 6 (lower is better)
Translates to: SENFQALCHLLQSHY*CSLELLQGVGVEFF
Trigger: GAAAAATTCCACACCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTGCAGGAGGTGACAGAGCGCCTGGAAGTTTTCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp CTGATTTCAGAGATATCTGCTTTGTCTAAGGAATCCAGTGCTTTATaGGCAGCTTCGAGGGCGGGGAGTGCCTCCTCCAGGTCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: LISEISALSKESSAL*AASRAGSASSRSLW
Trigger: CCAGAGAGACCTGGAGGAGGCACTCCCCGCCCTCGAAGCTGCCAATAAAGCACTGGATTCCTTAGACAAAGCAGATATCTCTGAAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp CGGCCAGCAGCTTTTCCATTAGATAGCCATAGCGCACTGTGTCTGTaGTGGGGACAAGCATCTCAAAGAATGGGACATCCCTGCTGTACT +
Preference number: 6 (lower is better)
Translates to: RPAAFPLDSHSALCL*WGQASQRMGHPCCT
Trigger: AGTACAGCAGGGATGTCCCATTCTTTGAGATGCTTGTCCCCACAACAGACACAGTGCGCTATGGCTATCTAATGGAAAAGCTGCTGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp AGAGCAACGCTGACCCCTTGGAGATCCAGTAATCACTaGTCCTCTTGGAGGGTAAGAGGACAGTCACCACAA +
Preference number: 6 (lower is better)
Translates to: RATLTPWRSSNH*SSWRVRGQSPQ
Trigger: TTGTGGTGACTGTCCTCTTACCCTCCAAGAGGATCAGTGATTACTGGATCTCCAAGGGGTCAGCGTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ACGTTTCGGGTGGGTCTCAGGGCTACCGAGTCCTTGTaGTGTTTATGGTATTTTTCCAGCTGGGAACTGAAG +
Preference number: 6 (lower is better)
Translates to: TFRVGLRATESL*CLWYFSSWELK
Trigger: CTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGGACTCGGTAGCCCTGAGACCCACCCGAAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp GAGGGTCGATGGACCTGTTTCCTTTTCACAGCTTCTTaGGCCTCGAGACTAATGATTGAAGCTCTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: EGRWTCFLFTAS*ASRLMIEALSA
Trigger: GGCTGACAGAGCTTCAATCATTAGTCTCGAGGCCCAAGAAGCTGTGAAAAGGAAACAGGTCCATCGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AGCGCGTCCACTGGCCCATCGCTGATTATCCATTTATaGTCTTCTGAAGTATCGTTCACAGCTGCTCGGACA +
Preference number: 6 (lower is better)
Translates to: SASTGPSLIIHL*SSEVSFTAART
Trigger: TGTCCGAGCAGCTGTGAACGATACTTCAGAAGACCATAAATGGATAATCAGCGATGGGCCAGTGGACGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp ACCAAAATCTTGATACTGCCGAAGCAGTTCAATTGGTaGTTGGGAGCCATAGCGGTCCAGCCGGGGCATATT +
Preference number: 6 (lower is better)
Translates to: TKILILPKQFNW*LGAIAVQPGHI
Trigger: AATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CGGAAGCACCCTCCATCTGCAGAGATTCTGGAACTCTaGTCTGGATTGAAGCCACAAGCTCCTGGACAATTT +
Preference number: 6 (lower is better)
Translates to: RKHPPSAEILEL*SGLKPQAPGQF
Trigger: AAATTGTCCAGGAGCTTGTGGCTTCAATCCAGACCAGAGTTCCAGAATCTCTGCAGATGGAGGGTGCTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AGCGTGGTTCTGGAGGGTCCCTGTGAGAAATCCTTGTaGGAAGAAGAACCCCGAAATCCAGAAGGATTTAGG +
Preference number: 6 (lower is better)
Translates to: SVVLEGPCEKSL*EEEPRNPEGFR
Trigger: CCTAAATCCTTCTGGATTTCGGGGTTCTTCTTCCCACAAGGATTTCTCACAGGGACCCTCCAGAACCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AAAATCTTGATACTGCCGAAGCAGTTCAATTGGTGGTaGGGAGCCATAGCGGTCCAGCCGGGGCATATTCAG +
Preference number: 6 (lower is better)
Translates to: KILILPKQFNWW*GAIAVQPGHIQ
Trigger: CTGAATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CTCTGTTCCCCTCAGAGATTCCAACTTCCTTTGCTTTaGGTCGGGTGGCTGCTAAAACGTGCTCCAACTCGT +
Preference number: 6 (lower is better)
Translates to: LCSPQRFQLPLL*VGWLLKRAPTR
Trigger: ACGAGTTGGAGCACGTTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGTTGGAATCTCTGAGGGGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GACTTCAGGGGACCCACATACCGGGATGAGGCAATGGTTGCAATGTaGATGGTGCTATCATCAAGTAGGACCTGTATGTCATCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: DFRGPTYRDEAMVAM*MVLSSSRTCMSSVP
Trigger: TGGCACAGATGACATACAGGTCCTACTTGATGATAGCACCATCAACATTGCAACCATTGCCTCATCCCGGTATGTGGGTCCCCTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ATCCCACTGAACAGGAGAGCATCGTCTGTTAAGAATTTCGGCAAGTaGGAGTCTCGCAACGCTCTGATCAGGACCACATCTTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: IPLNRRASSVKNFGK*ESRNALIRTTSSLR
Trigger: CCTCAGTGAAGATGTGGTCCTGATCAGAGCGTTGCGAGACTCCAACTTGCCGAAATTCTTAACAGACGATGCTCTCCTGTTCAGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GAATCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATTGGTGGTaGGGAGCCATAGCGGTCCAGCCGGGGCATATTCAGATCATCAAC +
Preference number: 6 (lower is better)
Translates to: ESTKILILPKQFNWW*GAIAVQPGHIQIIN
Trigger: GTTGATGATCTGAATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACACCTCATCTCTGTTCCCCTCAGAGATTCCAACTTCCTTTGCTTTaGGTCGGGTGGCTGCTAAAACGTGCTCCAACTCGTCCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: TPHLCSPQRFQLPLL*VGWLLKRAPTRPSQ
Trigger: TTGAGAAGGACGAGTTGGAGCACGTTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGTTGGAATCTCTGAGGGGAACAGAGATGAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TCTCCTAATGCAGCCGTTAGCTTTCCAGCACGTATCAGGCGCGCTTaGGTCAGGGCCATGTTCTTTGCCAGACTTTCTTTCTCATTCACT +
Preference number: 6 (lower is better)
Translates to: SPNAAVSFPARIRRA*VRAMFFARLSFSFT
Trigger: AGTGAATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGACCAAAGCGCGCCTGATACGTGCTGGAAAGCTAACGGCTGCATTAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GGGAAGAAGAACCCCGAAATCCAGAAGGATTTAGGCTGTCCTCGTTaGAGCCACAGGTCCACGAACTCAGTCCTCAGAATAAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: GKKNPEIQKDLGCPR*SHRSTNSVLRIRSL
Trigger: CAAAGACCTTATTCTGAGGACTGAGTTCGTGGACCTGTGGCTCAAACGAGGACAGCCTAAATCCTTCTGGATTTCGGGGTTCTTCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CTGTCACCTCCTGCAGTCGCACTATTTGTGCAGCCTTaGACTCCTGCAGGGTGTAGGTGTGGAATTTTTCAA +
Preference number: 6 (lower is better)
Translates to: LSPPAVALFVQP*TPAGCRCGIFQ
Trigger: TTGAAAAATTCCACACCTACACCCTGCAGGAGTTCAAGGCTGCACAAATAGTGCGACTGCAGGAGGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCCTCCAGGTCTCTCTGGGCATCATCAGCGATCGCTTaGGTCTCTTCAGCTTTCACCTTTGCTATTGCTTCA +
Preference number: 6 (lower is better)
Translates to: SSRSLWASSAIA*VSSAFTFAIAS
Trigger: TGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGATGCCCAGAGAGACCTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GCATGGGGTTCATCTGTCCTGGCAATGCGTCTTCTATaGCCATGTCTTTATCATCCCACCGAGAAGCATCCA +
Preference number: 6 (lower is better)
Translates to: AWGSSVLAMRLL*PCLYHPTEKHP
Trigger: TGGATGCTTCTCGGTGGGATGATAAAGACATGGTCATAGAAGACGCATTGCCAGGACAGATGAACCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GGATCCAGGCAGTCAAATTTGGACTTCAGCCATTCCTaGTGGAGATTATCCCATTCCGACAAGGAATCCCAG +
Preference number: 6 (lower is better)
Translates to: GSRQSNLDFSHS*WRLSHSDKESQ
Trigger: CTGGGATTCCTTGTCGGAATGGGATAATCTCCAGCAGGAATGGCTGAAGTCCAAATTTGACTGCCTGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp TTCGATCTGCATACACTTGTAACCACATATATGAGCTaGAAGTCTCGTGAGGGACTGCTTTCCCGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: FDLHTLVTTYMS*KSREGLLSRAS
Trigger: GGAGGCACGGGAAAGCAGTCCCTCACGAGACTTGCAGCTCATATATGTGGTTACAAGTGTATGCAGATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp TCCTGGAATTTCTCAATGCTTTCTTCCCACCGAACCTaGTCGTCTCCTAATGCAGCCGTTAGCTTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SWNFSMLSSHRT*SSPNAAVSFPA
Trigger: TGCTGGAAAGCTAACGGCTGCATTAGGAGACGAGCAGGTTCGGTGGGAAGAAAGCATTGAGAAATTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ATTGCATCCTTGATCATCTTCTCAGCAATGGGGCCCTaGCCTTGTCCCAGAGAAATTGACTGCACTCGTTCT +
Preference number: 6 (lower is better)
Translates to: IASLIIFSAMGP*PCPREIDCTRS
Trigger: AGAACGAGTGCAGTCAATTTCTCTGGGACAAGGGCAGGGCCCCATTGCTGAGAAGATGATCAAGGATGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TTTGCGGCTTTGGCATTCCTAATGGTGATGAGTTGCTaGGCAATGACCGACAGGACTTCTATGTCAATCCGG +
Preference number: 6 (lower is better)
Translates to: FAALAFLMVMSC*AMTDRTSMSIR
Trigger: CCGGATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TTCATGGTGATGAAAGCCGCGCAGGTCATAACGAGCTaGATTTCCCGTCCCTCAAACATGAATCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: FMVMKAAQVITS*ISRPSNMNLES
Trigger: GCTCTCCAGATTCATGTTTGAGGGACGGGAAATCAAGCTCGTTATGACCTGCGCGGCTTTCATCACCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TCACCAAGAAGTTGCTTTGCTGTTGGCCAGTCGGGCTaGGCATTTAAGAGGATGGAGATGGCTTCCATCACA +
Preference number: 6 (lower is better)
Translates to: SPRSCFAVGQSG*AFKRMEMASIT
Trigger: TGTGATGGAAGCCATCTCCATCCTCTTAAATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GTTTCTAGAGAGATGTGGATTAACTTCAGGAGATTGTaGAACCGGTCCACTTCCTGGCCAAGGACGGTGGTC +
Preference number: 6 (lower is better)
Translates to: VSREMWINFRRL*NRSTSWPRTVV
Trigger: GACCACCGTCCTTGGCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAATCCACATCTCTCTAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TCTAGCGTGGTTCTGGAGGGTCCCTGTGAGAAATCCTaGTGGGAAGAAGAACCCCGAAATCCAGAAGGATTT +
Preference number: 6 (lower is better)
Translates to: SSVVLEGPCEKS*WEEEPRNPEGF
Trigger: AAATCCTTCTGGATTTCGGGGTTCTTCTTCCCACAAGGATTTCTCACAGGGACCCTCCAGAACCACGCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GAATCTGGAGAGCTTTGCGGCTTTGGCATTCCTAATGGTGATGAGTaGCTGGGCAATGACCGACAGGACTTCTATGTCAATCCGGTTGAA +
Preference number: 6 (lower is better)
Translates to: ESGELCGFGIPNGDE*LGNDRQDFYVNPVE
Trigger: TTCAACCGGATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAAGCTCTCCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp CTCTTAGATCATCGTTTCCAGTGTCGACAGATGAGAAGAATGACTTaGATACAGACAGGAGCGCTTCCCTGGGCCACTGGACAAACCAGT +
Preference number: 6 (lower is better)
Translates to: LLDHRFQCRQMRRMT*IQTGALPWATGQTS
Trigger: ACTGGTTTGTCCAGTGGCCCAGGGAAGCGCTCCTGTCTGTATCAAAGTCATTCTTCTCATCTGTCGACACTGGAAACGATGATCTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp AAGTTAGAGTCACCAAGAAGTTGCTTTGCTGTTGGCCAGTCGGGCTaGGCATTTAAGAGGATGGAGATGGCTTCCATCACAGTCATGACC +
Preference number: 6 (lower is better)
Translates to: KLESPRSCFAVGQSG*AFKRMEMASITVMT
Trigger: GGTCATGACTGTGATGGAAGCCATCTCCATCCTCTTAAATGCCAAGCCCGACTGGCCAACAGCAAAGCAACTTCTTGGTGACTCTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GCTTTGTTGAGTGTTTCTAGAGAGATGTGGATTAACTTCAGGAGATaGTTGAACCGGTCCACTTCCTGGCCAAGGACGGTGGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: ALLSVSREMWINFRR*LNRSTSWPRTVVRE
Trigger: CTCTCTGACCACCGTCCTTGGCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAATCCACATCTCTCTAGAAACACTCAACAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GTCGCTGCGTACAAGCGTGCAGAGTCGAACGCTGCGTaGATTGTTTCCTTTATTTGCATGATGATGGTGAGA +
Preference number: 6 (lower is better)
Translates to: VAAYKRAESNAA*IVSFICMMMVR
Trigger: TCTCACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCACGCTTGTACGCAGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CCTTGTGCTGTTTATGGTATTTTTCCAGCTGGGAACTaGAGAATTGGACATCAGGCTCCTCCTGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PCAVYGIFPAGN*RIGHQAPPASG
Trigger: CCCTGAAGCAGGAGGAGCCTGATGTCCAATTCTTCAGTTCCCAGCTGGAAAAATACCATAAACAGCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp AGTCTTCGGGAGGTGTGGGCACCTGATACTGTTCAATaGGCTTGTACATCTGAACCACTACATTCGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SLREVWAPDTVQ*ACTSEPLHSLP
Trigger: AGGAAGCGAATGTAGTGGTTCAGATGTACAAGCTCATTGAACAGTATCAGGTGCCCACACCTCCCGAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCCCCAGAAGCCTGCCCAGATATGTCTTGGATTTCTTaGGCAAAATTAAAGACGTGCAGTTCGGACAGCCTC +
Preference number: 6 (lower is better)
Translates to: SPEACPDMSWIS*AKLKTCSSDSL
Trigger: GAGGCTGTCCGAACTGCACGTCTTTAATTTTGCTCAAGAAATCCAAGACATATCTGGGCAGGCTTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TTTCTAGAGAGATGTGGATTAACTTCAGGAGATTGTTaGACCGGTCCACTTCCTGGCCAAGGACGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: FLERCGLTSGDC*TGPLPGQGRWS
Trigger: TGACCACCGTCCTTGGCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAATCCACATCTCTCTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CATGGGCAGTTCTGTTCCAAATTGAATGTCCTTGGCTaGTTCTATCACTGCAGCTTGGTCTCGGTAGACTGG +
Preference number: 6 (lower is better)
Translates to: HGQFCSKLNVLG*FYHCSLVSVDW
Trigger: CCAGTCTACCGAGACCAAGCTGCAGTGATAGAATCAGCCAAGGACATTCAATTTGGAACAGAACTGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TTATCATCCCACCGAGAAGCATCCATGAACATTCCATaGACAAGAACCCCATCTTCAGGAGAGGGCAACTCC +
Preference number: 6 (lower is better)
Translates to: LSSHREASMNIP*TRTPSSGEGNS
Trigger: GGAGTTGCCCTCTCCTGAAGATGGGGTTCTTGTTCATGGAATGTTCATGGATGCTTCTCGGTGGGATGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AGCTTTGCGGCTTTGGCATTCCTAATGGTGATGAGTTaGTGGGCAATGACCGACAGGACTTCTATGTCAATC +
Preference number: 6 (lower is better)
Translates to: SFAALAFLMVMS*WAMTDRTSMSI
Trigger: GATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ACGTATCAGGCGCGCTTTGGTCAGGGCCATGTTCTTTaGCAGACTTTCTTTCTCATTCACTCCTTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: TYQARFGQGHVL*QTFFLIHSFLV
Trigger: TACGAGAAAGGAGTGAATGAGAAAGAAAGTCTGGCAAAGAACATGGCCCTGACCAAAGCGCGCCTGATACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AGGAGGGTCTGCTGCAGGAGGATTTTCAGGCGTTCATaGAGGTTGTCACTCTTCTCAGATGTTTCGATTGTT +
Preference number: 6 (lower is better)
Translates to: RRVCCRRIFRRS*RLSLFSDVSIV
Trigger: AACAATCGAAACATCTGAGAAGAGTGACAACCTGCATGAACGCCTGAAAATCCTCCTGCAGCAGACCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GAGCTTTGCGGCTTTGGCATTCCTAATGGTGATGAGTaGCTGGGCAATGACCGACAGGACTTCTATGTCAAT +
Preference number: 6 (lower is better)
Translates to: ELCGFGIPNGDE*LGNDRQDFYVN
Trigger: ATTGACATAGAAGTCCTGTCGGTCATTGCCCAGCAACTCATCACCATTAGGAATGCCAAAGCCGCAAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TGCAGAAATACCCAGTTTCCGGTTTTCATTGCATCCTaGATCATCTTCTCAGCAATGGGGCCCTGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: CRNTQFPVFIAS*IIFSAMGPCPC
Trigger: ACAAGGGCAGGGCCCCATTGCTGAGAAGATGATCAAGGATGCAATGAAAACCGGAAACTGGGTATTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGTGTTTCTAGAGAGATGTGGATTAACTTCAGGAGATaGTTGAACCGGTCCACTTCCTGGCCAAGGACGGTG +
Preference number: 6 (lower is better)
Translates to: SVSREMWINFRR*LNRSTSWPRTV
Trigger: CACCGTCCTTGGCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAATCCACATCTCTCTAGAAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TGGGGAGTGGTAGAGTGTGTGGACTGGCTCATAGTTTaGTTTTGGTTCAAAGTGAACTACAGGCAGCATGGG +
Preference number: 6 (lower is better)
Translates to: WGVVECVDWLIV*FWFKVNYRQHG
Trigger: CCCATGCTGCCTGTAGTTCACTTTGAACCAAAACAAAACTATGAGCCAGTCCACACACTCTACCACTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TATCATAGAATCCACCAAAATCTTGATACTGCCGAAGCAGTTCAATaGGTGGTTGGGAGCCATAGCGGTCCAGCCGGGGCATATTCAGAT +
Preference number: 6 (lower is better)
Translates to: YHRIHQNLDTAEAVQ*VVGSHSGPAGAYSD
Trigger: ATCTGAATATGCCCCGGCTGGACCGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATTCTATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTGAGGAGGGTCTGCTGCAGGAGGATTTTCAGGCGTTCATGCAGGTaGTCACTCTTCTCAGATGTTTCGATTGTTGTGTTGAACAACTGT +
Preference number: 6 (lower is better)
Translates to: VRRVCCRRIFRRSCR*SLFSDVSIVVLNNC
Trigger: ACAGTTGTTCAACACAACAATCGAAACATCTGAGAAGAGTGACAACCTGCATGAACGCCTGAAAATCCTCCTGCAGCAGACCCTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTGTTGAGTGTTTCTAGAGAGATGTGGATTAACTTCAGGAGATTGTaGAACCGGTCCACTTCCTGGCCAAGGACGGTGGTCAGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: LLSVSREMWINFRRL*NRSTSWPRTVVREF
Trigger: GAACTCTCTGACCACCGTCCTTGGCCAGGAAGTGGACCGGTTCAACAATCTCCTGAAGTTAATCCACATCTCTCTAGAAACACTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTACAAGCGTGCAGAGTCGAACGCTGCGTGAATTGTTTCCTTTATTaGCATGATGATGGTGAGAAAGTTCCTGTCATCCTCAAACACGGC +
Preference number: 6 (lower is better)
Translates to: VQACRVERCVNCFLY*HDDGEKVPVILKHG
Trigger: GCCGTGTTTGAGGATGACAGGAACTTTCTCACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCACGCTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GCAGCACAGTGTGGTCACTTTGCTGATGTCCACCTGTGGGATAGCTaGGGTGCACTTTTTGTTCACAAAATGCAACCCATCATCAACATA +
Preference number: 6 (lower is better)
Translates to: AAQCGHFADVHLWDS*GALFVHKMQPIINI
Trigger: TATGTTGATGATGGGTTGCATTTTGTGAACAAAAAGTGCACCCAAGCTATCCCACAGGTGGACATCAGCAAAGTGACCACACTGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACAGTGTTCAGCTTCATTTGTTCCATTGACAAGATATTTCCATCTTaGCTGAGCAGCAGAGACTCCAGCAGGCAGCACAGTGTGGTCACT +
Preference number: 6 (lower is better)
Translates to: TVFSFICSIDKIFPS*LSSRDSSRQHSVVT
Trigger: AGTGACCACACTGTGCTGCCTGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGAAGCTGAACACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TGGTACAGAGTGGCCAGGTCCACTGGAGGCGTCTCAATAAACTGTTaGCCAAGATTCTCTATCACAAAGTCTGTAAGAGCAAAAACCACC +
Preference number: 6 (lower is better)
Translates to: WYRVARSTGGVSINC*PRFSITKSVRAKTT
Trigger: GGTGGTTTTTGCTCTTACAGACTTTGTGATAGAGAATCTTGGCAAACAGTTTATTGAGACGCCTCCAGTGGACCTGGCCACTCTGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GACCCACATACCGGGATGAGGCAATGGTTGCAATGTTaGTGGTGCTATCATCAAGTAGGACCTGTATGTCAT +
Preference number: 6 (lower is better)
Translates to: DPHTGMRQWLQC*WCYHQVGPVCH
Trigger: ATGACATACAGGTCCTACTTGATGATAGCACCATCAACATTGCAACCATTGCCTCATCCCGGTATGTGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp ACCCTGAGGTCTTGTACCTCAAAAAGCATGTGGATCTaGGGTGTGAGTTTAATCCTTTCGCTGTTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TLRSCTSKSMWI*GVSLILSLLAR
Trigger: CCTGGCTAACAGCGAAAGGATTAAACTCACACCTCAGATCCACATGCTTTTTGAGGTACAAGACCTCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCATTTGTTCCATTGACAAGATATTTCCATCTTTGCTaGGCAGCAGAGACTCCAGCAGGCAGCACAGTGTGG +
Preference number: 6 (lower is better)
Translates to: SFVPLTRYFHLC*AAETPAGSTVW
Trigger: CCACACTGTGCTGCCTGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CACAGGATTGCGTCCCCCTCCTGGAGGTGCACATGCTaGCACAATTGTTACATCCTGTATTTCTTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: HRIASPSWRCTC*HNCYILYFFPK
Trigger: TTTTGGAAAGAAATACAGGATGTAACAATTGTGTCAGCATGTGCACCTCCAGGAGGGGGACGCAATCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AGTCTTGGAGGCTGTCAGCCAAGGGGGCAAAATAGATaGCTGAGTCAGAGTATGTGTAATCATCATCCAATG +
Preference number: 6 (lower is better)
Translates to: SLGGCQPRGQNR*LSQSMCNHHPM
Trigger: CATTGGATGATGATTACACATACTCTGACTCAGGCATCTATTTTGCCCCCTTGGCTGACAGCCTCCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TCAGTGACTTCCGGCTTCTCTTCAGTAATCCACTTCTaGATGACGTCTGCTGAGGGAGTTCGCTTTAGTTTA +
Preference number: 6 (lower is better)
Translates to: SVTSGFSSVIHF*MTSAEGVRFSL
Trigger: TAAACTAAAGCGAACTCCCTCAGCAGACGTCATCCAGAAGTGGATTACTGAAGAGAAGCCGGAAGTCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CACTGTGTCTGTTGTGGGGACAAGCATCTCAAAGAATaGGACATCCCTGCTGTACTTGAAGGTGGGTATAAT +
Preference number: 6 (lower is better)
Translates to: HCVCCGDKHLKE*DIPAVLEGGYN
Trigger: ATTATACCCACCTTCAAGTACAGCAGGGATGTCCCATTCTTTGAGATGCTTGTCCCCACAACAGACACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp ATGAACACGTTTCCAACGATGTTTGCTAGCTCCTCCTaGAATTTCTCAATGCTTTCTTCCCACCGAACCTGC +
Preference number: 6 (lower is better)
Translates to: MNTFPTMFASSS*NFSMLSSHRTC
Trigger: GCAGGTTCGGTGGGAAGAAAGCATTGAGAAATTCCAGGAGGAGCTAGCAAACATCGTTGGAAACGTGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TGTCCATGGGCAGTTCTGTTCCAAATTGAATGTCCTTaGCTGATTCTATCACTGCAGCTTGGTCTCGGTAGA +
Preference number: 6 (lower is better)
Translates to: CPWAVLFQIECP*LILSLQLGLGR
Trigger: TCTACCGAGACCAAGCTGCAGTGATAGAATCAGCCAAGGACATTCAATTTGGAACAGAACTGCCCATGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AACTGTTTGATGCTTGTTTCTCGATCACCCACAGATTaGTCAATGGCATTCCGGACGGCAGTTATAGACGGC +
Preference number: 6 (lower is better)
Translates to: NCLMLVSRSPTD*SMAFRTAVIDG
Trigger: GCCGTCTATAACTGCCGTCCGGAATGCCATTGACAAATCTGTGGGTGATCGAGAAACAAGCATCAAACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TGTGGTCACTTTGCTGATGTCCACCTGTGGGATAGCTaGGGTGCACTTTTTGTTCACAAAATGCAACCCATC +
Preference number: 6 (lower is better)
Translates to: CGHFADVHLWDS*GALFVHKMQPI
Trigger: GATGGGTTGCATTTTGTGAACAAAAAGTGCACCCAAGCTATCCCACAGGTGGACATCAGCAAAGTGACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GTCTGCTGCAGGAGGATTTTCAGGCGTTCATGCAGGTaGTCACTCTTCTCAGATGTTTCGATTGTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: VCCRRIFRRSCR*SLFSDVSIVVL
Trigger: CAACACAACAATCGAAACATCTGAGAAGAGTGACAACCTGCATGAACGCCTGAAAATCCTCCTGCAGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GTGGCCAGGTCCACTGGAGGCGTCTCAATAAACTGTTaGCCAAGATTCTCTATCACAAAGTCTGTAAGAGCA +
Preference number: 6 (lower is better)
Translates to: VARSTGGVSINC*PRFSITKSVRA
Trigger: TGCTCTTACAGACTTTGTGATAGAGAATCTTGGCAAACAGTTTATTGAGACGCCTCCAGTGGACCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TGCAGACAAAACTGTTTGATGCTTGTTTCTCGATCACCCACAGATTaGTCAATGGCATTCCGGACGGCAGTTATAGACGGCTTCATAGTG +
Preference number: 6 (lower is better)
Translates to: CRQNCLMLVSRSPTD*SMAFRTAVIDGFIV
Trigger: CACTATGAAGCCGTCTATAACTGCCGTCCGGAATGCCATTGACAAATCTGTGGGTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TGCTGGAGATTATCCCATTCCGACAAGGAATCCCAGAGCAGTTGTTaGAGCCTGAGTTCAGCACTAACTTCTTCCAATGCATCAAACTTG +
Preference number: 6 (lower is better)
Translates to: CWRLSHSDKESQSSC*SLSSALTSSNASNL
Trigger: CAAGTTTGATGCATTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAACTGCTCTGGGATTCCTTGTCGGAATGGGATAATCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTCCTGCTGGAGATTATCCCATTCCGACAAGGAATCCCAGAGCAGTaGTTTGAGCCTGAGTTCAGCACTAACTTCTTCCAATGCATCAAA +
Preference number: 6 (lower is better)
Translates to: FLLEIIPFRQGIPEQ*FEPEFSTNFFQCIK
Trigger: TTTGATGCATTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAACTGCTCTGGGATTCCTTGTCGGAATGGGATAATCTCCAGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp AGCGTCAAAGTACGAGTCAGGCACCAGATTAGGAACTaGCAACACCGTGTTTTCAAAGTGATTAATTGCCCC +
Preference number: 6 (lower is better)
Translates to: SVKVRVRHQIRN*QHRVFKVINCP
Trigger: GGGGCAATTAATCACTTTGAAAACACGGTGTTGTCAGTTCCTAATCTGGTGCCTGACTCGTACTTTGACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CTTCAAGGTCCCGACCCAAGTGCAGACAAAACTGTTTaGTGCTTGTTTCTCGATCACCCACAGATTTGTCAA +
Preference number: 6 (lower is better)
Translates to: LQGPDPSADKTV*CLFLDHPQICQ
Trigger: TTGACAAATCTGTGGGTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCACTTGGGTCGGGACCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TTCTCAGGCACGAAGTCAGGATTGTTGATGTACTTCTaGAGCTTCAACAGGATCTGCGGCTTTATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: FSGTKSGLLMYF*SFNRICGFMFS
Trigger: GGAGAACATAAAGCCGCAGATCCTGTTGAAGCTTCAGAAGTACATCAACAATCCTGACTTCGTGCCTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCTTCTCCCCTGAGTAACCAAAATGCCATTCTCAGTTaGTATCAAGTCTCTGGGCAGTCCATCTGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: SSPLSNQNAILS*YQVSGQSICVP
Trigger: TGGAACACAGATGGACTGCCCAGAGACTTGATATCAACTGAGAATGGCATTTTGGTTACTCAGGGGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TTGGAGGCTGTCAGCCAAGGGGGCAAAATAGATGCCTaGGTCAGAGTATGTGTAATCATCATCCAATGTTTC +
Preference number: 6 (lower is better)
Translates to: LEAVSQGGKIDA*VRVCVIIIQCF
Trigger: GAAACATTGGATGATGATTACACATACTCTGACTCAGGCATCTATTTTGCCCCCTTGGCTGACAGCCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AGAAAGTCTTCCAAAGAAGGCTCGAAGAGTAGTGATTaGACTGTCAGAATCAGTTCTGTGAGGAACATGGGG +
Preference number: 6 (lower is better)
Translates to: RKSSKEGSKSSD*TVRISSVRNMG
Trigger: CCCCATGTTCCTCACAGAACTGATTCTGACAGTGCAATCACTACTCTTCGAGCCTTCTTTGGAAGACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp AAATGTCGCTGCGTACAAGCGTGCAGAGTCGAACGCTaGGTGAATTGTTTCCTTTATTTGCATGATGATGGT +
Preference number: 6 (lower is better)
Translates to: KCRCVQACRVER*VNCFLYLHDDG
Trigger: ACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCACGCTTGTACGCAGCGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ACTTCCTTTGCTTTTGGTCGGGTGGCTGCTAAAACGTaGTCCAACTCGTCCTTCTCAAATAAATTAGGCACT +
Preference number: 6 (lower is better)
Translates to: TSFAFGRVAAKT*SNSSFSNKLGT
Trigger: AGTGCCTAATTTATTTGAGAAGGACGAGTTGGAGCACGTTTTAGCAGCCACCCGACCAAAAGCAAAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AGCTGGTTTTTATCGCTGTTGATCCTCACGATTAGCTaGATCCTCTGTTCCTCCAACTCAGGCTTTTCAAGT +
Preference number: 6 (lower is better)
Translates to: SWFLSLLILTIS*ILCSSNSGFSS
Trigger: ACTTGAAAAGCCTGAGTTGGAGGAACAGAGGATCCAGCTAATCGTGAGGATCAACAGCGATAAAAACCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AGTAAAGGCTCGCCTGATATTTGCACGCAAGCCTTTTaGAGGCTCATTGGTTACCTTGACAGAATTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SKGSPDICTQAF*RLIGYLDRILK
Trigger: CTTCAGAATTCTGTCAAGGTAACCAATGAGCCTCCAAAAGGCTTGCGTGCAAATATCAGGCGAGCCTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AAAGTGAACTACAGGCAGCATGGGGTTCATCTGTCCTaGCAATGCGTCTTCTATGACCATGTCTTTATCATC +
Preference number: 6 (lower is better)
Translates to: KVNYRQHGVHLS*QCVFYDHVFII
Trigger: GATGATAAAGACATGGTCATAGAAGACGCATTGCCAGGACAGATGAACCCCATGCTGCCTGTAGTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TTATCCCATTCCGACAAGGAATCCCAGAGCAGTTGTTaGAGCCTGAGTTCAGCACTAACTTCTTCCAATGCA +
Preference number: 6 (lower is better)
Translates to: LSHSDKESQSSC*SLSSALTSSNA
Trigger: TGCATTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAACTGCTCTGGGATTCCTTGTCGGAATGGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GAGATTATCCCATTCCGACAAGGAATCCCAGAGCAGTaGTTTGAGCCTGAGTTCAGCACTAACTTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: EIIPFRQGIPEQ*FEPEFSTNFFQ
Trigger: TTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAACTGCTCTGGGATTCCTTGTCGGAATGGGATAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGCTTCATTTGTTCCATTGACAAGATATTTCCATCTTaGCTGAGCAGCAGAGACTCCAGCAGGCAGCACAGT +
Preference number: 6 (lower is better)
Translates to: SFICSIDKIFPS*LSSRDSSRQHS
Trigger: ACTGTGCTGCCTGCTGGAGTCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGTGGTAGAGTGTGTGGACTGGCTCATAGTTTTGTTTaGGTTCAAAGTGAACTACAGGCAGCATGGGGTTCA +
Preference number: 6 (lower is better)
Translates to: SGRVCGLAHSFV*VQSELQAAWGS
Trigger: TGAACCCCATGCTGCCTGTAGTTCACTTTGAACCAAAACAAAACTATGAGCCAGTCCACACACTCTACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTGTTGAGATCTTCAAGGTCCCGACCCAAGTGCAGACAAAACTGTTaGATGCTTGTTTCTCGATCACCCACAGATTTGTCAATGGCATTC +
Preference number: 6 (lower is better)
Translates to: LLRSSRSRPKCRQNC*MLVSRSPTDLSMAF
Trigger: GAATGCCATTGACAAATCTGTGGGTGATCGAGAAACAAGCATCAAACAGTTTTGTCTGCACTTGGGTCGGGACCTTGAAGATCTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACACTTAGTGCCATCAAACCGTCCTTCCATTCCAAGGTCACGTTATaGACTTCCCCATATAACTCTCCCATTGTGATCGATTTGGGGTTA +
Preference number: 6 (lower is better)
Translates to: TLSAIKPSFHSKVTL*TSPYNSPIVIDLGL
Trigger: TAACCCCAAATCGATCACAATGGGAGAGTTATATGGGGAAGTCAATAACGTGACCTTGGAATGGAAGGACGGTTTGATGGCACTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp CATCATCAGCGATCGCTTGAGTCTCTTCAGCTTTCACCTTTGCTATaGCTTCATCTTCTTGCACAACATTACGGACCTGATCAGCACTTT +
Preference number: 6 (lower is better)
Translates to: HHQRSLESLQLSPLL*LHLLAQHYGPDQHF
Trigger: AAAGTGCTGATCAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATCGCTGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTCAGGATTTTGTCTTCGATAGATTTCAGCTGGTTTTTATCGCTGTaGATCCTCACGATTAGCTGGATCCTCTGTTCCTCCAACTCAGGC +
Preference number: 6 (lower is better)
Translates to: FRILSSIDFSWFLSL*ILTISWILCSSNSG
Trigger: GCCTGAGTTGGAGGAACAGAGGATCCAGCTAATCGTGAGGATCAACAGCGATAAAAACCAGCTGAAATCTATCGAAGACAAAATCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp ACATTCGCTTCCTCCTCCAGGGTTTCGATCCGCTCCTaGATTTCATCAAGGAAAACTAAGCTGTTGACATAT +
Preference number: 6 (lower is better)
Translates to: TFASSSRVSIRS*ISSRKTKLLTY
Trigger: ATATGTCAACAGCTTAGTTTTCCTTGATGAAATTCAGGAGCGGATCGAAACCCTGGAGGAGGAAGCGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp TCAGGCTTTTCAAGTCGCACAACGTCACTTAGCAACTaGTCCTCCAGACCCGATTTAGTTACAGTGAAATTG +
Preference number: 6 (lower is better)
Translates to: SGFSSRTTSLSN*SSRPDLVTVKL
Trigger: CAATTTCACTGTAACTAAATCGGGTCTGGAGGATCAGTTGCTAAGTGACGTTGTGCGACTTGAAAAGCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ATCTCAACTGCAGCTTCTACAATATTTGATGACGTTTaGTTTACTGCTTCTGGGAAGTCAGCCAGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ISTAASTIFDDV*FTASGKSARKP
Trigger: TGGCTTCCTGGCTGACTTCCCAGAAGCAGTAAAGCAAACGTCATCAAATATTGTAGAAGCTGCAGTTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GATCGCTTGAGTCTCTTCAGCTTTCACCTTTGCTATTaGTTCATCTTCTTGCACAACATTACGGACCTGATC +
Preference number: 6 (lower is better)
Translates to: DRLSLFSFHLCY*FIFLHNITDLI
Trigger: GATCAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TGCAGAGTCGAACGCTGCGTGAATTGTTTCCTTTATTaGCATGATGATGGTGAGAAAGTTCCTGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: CRVERCVNCFLY*HDDGEKVPVIL
Trigger: GAGGATGACAGGAACTTTCTCACCATCATCATGCAAATAAAGGAAACAATTCACGCAGCGTTCGACTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CGATCGCTTGAGTCTCTTCAGCTTTCACCTTTGCTATaGCTTCATCTTCTTGCACAACATTACGGACCTGAT +
Preference number: 6 (lower is better)
Translates to: RSLESLQLSPLL*LHLLAQHYGPD
Trigger: ATCAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGAAGAGACTCAAGCGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TTGTCTTCGATAGATTTCAGCTGGTTTTTATCGCTGTaGATCCTCACGATTAGCTGGATCCTCTGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LSSIDFSWFLSL*ILTISWILCSS
Trigger: GGAGGAACAGAGGATCCAGCTAATCGTGAGGATCAACAGCGATAAAAACCAGCTGAAATCTATCGAAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTCTTGCAAAGTCTTTATTTGATCTTCCACTTGCTTCAGCAATGCTaGCTTTTCTTTCAGGGTAGCCATTGTAGCGTCAAGTTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: VLQSLYLIFHLLQQC*LFFQGSHCSVKFSL
Trigger: CAGGCTGAACTTGACGCTACAATGGCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CTTCTTCCAATGCATCAAACTTGGACACTTCCACCTTaGAATTCTTCTGGTAGGATTTGTACTGAAAGGCGC +
Preference number: 6 (lower is better)
Translates to: LLPMHQTWTLPP*NSSGRICTERR
Trigger: GCGCCTTTCAGTACAAATCCTACCAGAAGAATTTCAAGGTGGAAGTGTCCAAGTTTGATGCATTGGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp CTGGCACAGTACAGTGTTCAGCTTCATTTGTTCCATTaGCAAGATATTTCCATCTTTGCTGAGCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: LAQYSVQLHLFH*QDISIFAEQQR
Trigger: TCTCTGCTGCTCAGCAAAGATGGAAATATCTTGTCAATGGAACAAATGAAGCTGAACACTGTACTGTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GACCAAAGAGAGGGAACCTGGTTGTTCAGGAAACTCTaGTACACTTTTTCCATTTCTTCAGACATCACCACA +
Preference number: 6 (lower is better)
Translates to: DQREGTWLFRKL*YTFSISSDITT
Trigger: TGTGGTGATGTCTGAAGAAATGGAAAAAGTGTATCAGAGTTTCCTGAACAACCAGGTTCCCTCTCTTTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp GACCTTGGCTTGAACCAGCTCAGAAACTATATCTCTTaGGTGCACATCAATGGTAATCAATGCAGTGATGAT +
Preference number: 6 (lower is better)
Translates to: DLGLNQLRNYIS*VHINGNQCSDD
Trigger: ATCATCACTGCATTGATTACCATTGATGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064948.13
ENSMUST00000204053.2
CDS CAA 90 bp AATCTCTCAAAATTTACTTGTTCAAAATCTTCCAGGGCGTCTACGTaGTCACCTTCACATTCTAGACTCTCAGTTAAATCCCGGCACCAC +
Preference number: 6 (lower is better)
Translates to: NLSKFTCSKSSRAST*SPSHSRLSVKSRHH
Trigger: GTGGTGCCGGGATTTAACTGAGAGTCTAGAATGTGAAGGTGACAACGTAGACGCCCTGGAAGATTTTGAACAAGTAAATTTTGAGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp AGCTGTATCACCTTTTTGACCATACATAACTCAGGCTaGAGGTTCTGGTTAATCATGACCTCCACAATTGTC +
Preference number: 6 (lower is better)
Translates to: SCITFLTIHNSG*RFWLIMTSTIV
Trigger: GACAATTGTGGAGGTCATGATTAACCAGAACCTTCAGCCTGAGTTATGTATGGTCAAAAAGGTGATACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp ATCCTTGGCTTGAACCAGCTCAGAAACTATATCTCTTaGGTGCACATCAATGGTAATCAATGCAGTGATGAT +
Preference number: 6 (lower is better)
Translates to: ILGLNQLRNYIS*VHINGNQCSDD
Trigger: ATCATCACTGCATTGATTACCATTGATGTGCACGCAAGAGATATAGTTTCTGAGCTGGTTCAAGCCAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114040.8
CDS CAA 72 bp TGTCGACTGCAAAATACCATAGTCATGTTCTGGGATTaGGACTCCAGGAAAAAGATCAGATATGATCCCACT +
Preference number: 6 (lower is better)
Translates to: CRLQNTIVMFWD*DSRKKIRYDPT
Trigger: AGTGGGATCATATCTGATCTTTTTCCTGGAGTCCAAATCCCAGAACATGACTATGGTATTTTGCAGTCGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGGAAAACCATATCTTTGTCTTCCACACCAGCCATCTaGTACAATTTCCTCAGGTCTTCGTGGAAATTGTCA +
Preference number: 6 (lower is better)
Translates to: RKTISLSSTPAI*YNFLRSSWKLS
Trigger: TGACAATTTCCACGAAGACCTGAGGAAATTGTACAAGATGGCTGGTGTGGAAGACAAAGATATGGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp AGTCTTTATTTGATCTTCCACTTGCTTCAGCAATGCTaGCTTTTCTTTCAGGGTAGCCATTGTAGCGTCAAG +
Preference number: 6 (lower is better)
Translates to: SLYLIFHLLQQC*LFFQGSHCSVK
Trigger: CTTGACGCTACAATGGCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp CCCAGTCGGATGGAATTTTCCAGTATTCGTAAGAAATaGGTGTCTGTAAGCTTAATGACCTTTAACCCACTC +
Preference number: 6 (lower is better)
Translates to: PSRMEFSSIRKK*VSVSLMTFNPL
Trigger: GAGTGGGTTAAAGGTCATTAAGCTTACAGACACCAATTTCTTACGAATACTGGAAAATTCCATCCGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp ATTTCTTCAGACATCACCACAAGCCCAGCAATGGCTTaGTTGAGTGTTTCTAGAGAGATGTGGATTAACTTC +
Preference number: 6 (lower is better)
Translates to: ISSDITTSPAMA*LSVSREMWINF
Trigger: GAAGTTAATCCACATCTCTCTAGAAACACTCAACAAAGCCATTGCTGGGCTTGTGGTGATGTCTGAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TCATTCTCATGTACTATTTTGATGATTTGCAAGGGGTCTCTAATGTaGGCTTTAATGACTTCTTCTCGGTCATGGAAGGTGTACGTCGGA +
Preference number: 6 (lower is better)
Translates to: SFSCTILMICKGSLM*ALMTSSRSWKVYVG
Trigger: TCCGACGTACACCTTCCATGACCGAGAAGAAGTCATTAAAGCCAACATTAGAGACCCCTTGCAAATCATCAAAATAGTACATGAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTCTTTCCAAAAGAGTTTGTTTCTATCATAGAATCCACCAAAATCTaGATACTGCCGAAGCAGTTCAATTGGTGGTTGGGAGCCATAGCG +
Preference number: 6 (lower is better)
Translates to: FFPKEFVSIIESTKI*ILPKQFNWWLGAIA
Trigger: CGCTATGGCTCCCAACCACCAATTGAACTGCTTCGGCAGTATCAAGATTTTGGTGGATTCTATGATAGAAACAAACTCTTTTGGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TCCTTTCTCGTACTTGTCTTGCAAAGTCTTTATTTGATCTTCCACTaGCTTCAGCAATGCTTGCTTTTCTTTCAGGGTAGCCATTGTAGC +
Preference number: 6 (lower is better)
Translates to: SFLVLVLQSLYLIFH*LQQCLLFFQGSHCS
Trigger: GCTACAATGGCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGACAAGTACGAGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACAGGTAAACCCAGTCGGATGGAATTTTCCAGTATTCGTAAGAAATaGGTGTCTGTAAGCTTAATGACCTTTAACCCACTCTTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: TGKPSRMEFSSIRKK*VSVSLMTFNPLLLS
Trigger: GGAAAGCAAGAGTGGGTTAAAGGTCATTAAGCTTACAGACACCAATTTCTTACGAATACTGGAAAATTCCATCCGACTGGGTTTACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ACTTTTTCCATTTCTTCAGACATCACCACAAGCCCAGCAATGGCTTaGTTGAGTGTTTCTAGAGAGATGTGGATTAACTTCAGGAGATTG +
Preference number: 6 (lower is better)
Translates to: TFSISSDITTSPAMA*LSVSREMWINFRRL
Trigger: CAATCTCCTGAAGTTAATCCACATCTCTCTAGAAACACTCAACAAAGCCATTGCTGGGCTTGTGGTGATGTCTGAAGAAATGGAAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp CTTTGCCAGACTTTCTTTCTCATTCACTCCTTTCTCGTACTTGTCTaGCAAAGTCTTTATTTGATCTTCCACTTGCTTCAGCAATGCTTG +
Preference number: 6 (lower is better)
Translates to: LCQTFFLIHSFLVLV*QSLYLIFHLLQQCL
Trigger: CAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGACAAGTACGAGAAAGGAGTGAATGAGAAAGAAAGTCTGGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS GCA 72 bp TTGTTTGAGCCTGAGTTCAGCACTAACTTCTTCCAATaGATCAAACTTGGACACTTCCACCTTGAAATTCTT +
Preference number: 6 (lower is better)
Translates to: LFEPEFSTNFFQ*IKLGHFHLEIL
Trigger: AAGAATTTCAAGGTGGAAGTGTCCAAGTTTGATGCATTGGAAGAAGTTAGTGCTGAACTCAGGCTCAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GTACTTGTCTTGCAAAGTCTTTATTTGATCTTCCACTaGCTTCAGCAATGCTTGCTTTTCTTTCAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: VLVLQSLYLIFH*LQQCLLFFQGS
Trigger: GCTACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGACAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GTAAAGGAATCCGAGATGTTCATTCTCATGTACTATTTTGATGATTaGCAAGGGGTCTCTAATGTTGGCTTTAATGACTTCTTCTCGGTC +
Preference number: 6 (lower is better)
Translates to: VKESEMFILMYYFDD*QGVSNVGFNDFFSV
Trigger: GACCGAGAAGAAGTCATTAAAGCCAACATTAGAGACCCCTTGCAAATCATCAAAATAGTACATGAGAATGAACATCTCGGATTCCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp GACTTCTCTGCTCCAAACTTAATGAAATCCCCAAATATGATGGGCTaGCTTAAAAAGTATTCCAGGTCAATTGCAATTCCAAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: DFSAPNLMKSPNMMG*LKKYSRSIAIPKCL
Trigger: CAAGCACTTTGGAATTGCAATTGACCTGGAATACTTTTTAAGCAAGCCCATCATATTTGGGGATTTCATTAAGTTTGGAGCAGAGAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp TTTCTCATTCACTCCTTTCTCGTACTTGTCTTGCAAAGTCTTTATTaGATCTTCCACTTGCTTCAGCAATGCTTGCTTTTCTTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: FLIHSFLVLVLQSLY*IFHLLQQCLLFFQG
Trigger: ACCCTGAAAGAAAAGCAAGCATTGCTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGACAAGTACGAGAAAGGAGTGAATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp CACAATTGTCGACTGCAAAATACCATAGTCATGTTCTaGGATTTGGACTCCAGGAAAAAGATCAGATATGAT +
Preference number: 6 (lower is better)
Translates to: HNCRLQNTIVMF*DLDSRKKIRYD
Trigger: ATCATATCTGATCTTTTTCCTGGAGTCCAAATCCCAGAACATGACTATGGTATTTTGCAGTCGACAATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 90 bp ATGGTAATCAATGCAGTGATGATGTTTCTGTGTAATTTAGGAAGATaGCCTCGAACTATTGCGGCCAGGGCATTTAATCTCTCAAAATTT +
Preference number: 6 (lower is better)
Translates to: MVINAVMMFLCNLGR*PRTIAARAFNLSKF
Trigger: AAATTTTGAGAGATTAAATGCCCTGGCCGCAATAGTTCGAGGCAATCTTCCTAAATTACACAGAAACATCATCACTGCATTGATTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS TCA 72 bp GATTGTTGTGTTGAACAACTGTTTAAAATATTTCAGTaGATACTGATACATGGGGTCGATTTCCGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: DCCVEQLFKIFQ*ILIHGVDFREA
Trigger: AGCCTCTCGGAAATCGACCCCATGTATCAGTATTCACTGAAATATTTTAAACAGTTGTTCAACACAACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp TTGTTTAGTCTGGCAAGTATAGGATTTTCTTCTGCCTaGTGTTCAATACTTTTCAGGTCAATTTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LFSLASIGFSSA*CSILFRSISSS
Trigger: AGAGGATGAAATTGACCTGAAAAGTATTGAACACCAGGCAGAAGAAAATCCTATACTTGCCAGACTAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CCA 72 bp AACTTACGACCTTTAGATTATATGTATCGTATTCTATaGAAGACTTGGGTACGGCAGAGATCATGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: NLRPLDYMYRIL*KTWVRQRSCKG
Trigger: TCCTTTACATGATCTCTGCCGTACCCAAGTCTTCCATAGAATACGATACATATAATCTAAAGGTCGTAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp TCCGAGATGTTCATTCTCATGTACTATTTTGATGATTaGCAAGGGGTCTCTAATGTTGGCTTTAATGACTTC +
Preference number: 6 (lower is better)
Translates to: SEMFILMYYFDD*QGVSNVGFNDF
Trigger: GAAGTCATTAAAGCCAACATTAGAGACCCCTTGCAAATCATCAAAATAGTACATGAGAATGAACATCTCGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp GCTCCAAACTTAATGAAATCCCCAAATATGATGGGCTaGCTTAAAAAGTATTCCAGGTCAATTGCAATTCCA +
Preference number: 6 (lower is better)
Translates to: APNLMKSPNMMG*LKKYSRSIAIP
Trigger: TGGAATTGCAATTGACCTGGAATACTTTTTAAGCAAGCCCATCATATTTGGGGATTTCATTAAGTTTGGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2
CDS CAA 72 bp ACTTTCTTTCTCATTCACTCCTTTCTCGTACTTGTCTaGCAAAGTCTTTATTTGATCTTCCACTTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: TFFLIHSFLVLV*QSLYLIFHLLQ
Trigger: CTGAAGCAAGTGGAAGATCAAATAAAGACTTTGCAAGACAAGTACGAGAAAGGAGTGAATGAGAAAGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064948.13
ENSMUST00000114040.8
ENSMUST00000204053.2