RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019027

Ensembl transcript IDs: ENSMUST00000048603.8

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGGCCACTACCACCCACACCCAACAGGAGCGCATTGCCCAGAGCCTaGCGCAGCGTCCGGCTGATGCGGCAGATATGGCTCATGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RPLPPTPNRSALPRA*RSVRLMRQIWLMAS
Trigger: GGACGCCATGAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGCGCTCCTGTTGGGTGTGGGTGGTAGTGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CACCCAACAGGAGCGCATTGCCCAGAGCCTGGCGCAGCGTCCGGCTaGTGCGGCAGATATGGCTCATGGCGTCCACGAAGAGGACCAGCC +
Preference number: 5 (lower is better)
Translates to: HPTGAHCPEPGAASG*CGRYGSWRPRRGPA
Trigger: GGCTGGTCCTCTTCGTGGACGCCATGAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGCGCTCCTGTTGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GCATTGCCCAGAGCCTGGCGCAGCGTCCGGCTGATGCGGCAGATATaGCTCATGGCGTCCACGAAGAGGACCAGCCTCAGCTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ALPRAWRSVRLMRQI*LMASTKRTSLSLAV
Trigger: CACAGCCAAGCTGAGGCTGGTCCTCTTCGTGGACGCCATGAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GGCAAGCCAAAGATGCGCTCGCGGTTGTTGTACAGCATCGCCAGCTaGTGGCAGTCCTTCAGCTGCTTCTTGACCCGCCGCACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: GKPKMRSRLLYSIAS*WQSFSCFLTRRTSL
Trigger: CAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACAACCGCGAGCGCATCTTTGGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TTGGCGTGGACCTCAATGACAATGAGTGCCGAAAGCACCATCCGCTaGATGCGGGACAGCTTCCCCCTCACCAGGGCCACCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: LAWTSMTMSAESTIR*MRDSFPLTRATRSL
Trigger: CAGTGACCTGGTGGCCCTGGTGAGGGGGAAGCTGTCCCGCATGCAGCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CTTGCGCAGAGCGTTGGCCTGGACCACGCGCTGTGTGAACACACGTaGATCCTCAGCACAGAAGAGGAGCTGGATCCTCGGGACCCAGTA +
Preference number: 5 (lower is better)
Translates to: LAQSVGLDHALCEHT*ILSTEEELDPRDPV
Trigger: TACTGGGTCCCGAGGATCCAGCTCCTCTTCTGTGCTGAGGATCCACGTGTGTTCACACAGCGCGTGGTCCAGGCCAACGCTCTGCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TTCCTGTGCCTGTCGGCCCGATACACAGCACAGGCTTGTGGTTGGTaGGCAGCATGCCCAGCAGGTAGGACATCTGCACGGTGTCCATGG +
Preference number: 5 (lower is better)
Translates to: FLCLSARYTAQACGW*AACPAGRTSARCPW
Trigger: CCATGGACACCGTGCAGATGTCCTACCTGCTGGGCATGCTGCTCACCAACCACAAGCCTGTGCTGTGTATCGGGCCGACAGGCACAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TCGCGGTTGTTGTACAGCATCGCCAGCTGCTGGCAGTCCTTCAGCTaGTTCTTGACCCGCCGCACCTCGTTGGCAATCTCGTGTGCTCGT +
Preference number: 5 (lower is better)
Translates to: SRLLYSIASCWQSFS*FLTRRTSLAISCAR
Trigger: ACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACAACCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp AGTACCTCCCAGTGCCGGTTCCGCATACCAGGGTTGCGCAGGCCTTaGATCAGCGGGATGTACGGCTTGAACTCCTCTATGCGTGTTCGG +
Preference number: 5 (lower is better)
Translates to: STSQCRFRIPGLRRP*ISGMYGLNSSMRVR
Trigger: CCGAACACGCATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TTCCCCCTCACCAGGGCCACCAGGTCACTGAGCTGTTTGGAGAGCTaGGGGAACAGCTTGCTACTGATGTTGCCAGCCTCAAGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: FPLTRATRSLSCLES*GNSLLLMLPASSAS
Trigger: CGAGGCACTTGAGGCTGGCAACATCAGTAGCAAGCTGTTCCCCCAGCTCTCCAAACAGCTCAGTGACCTGGTGGCCCTGGTGAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GAGGCTTTCAAGGAAGCGGCCTGGGTCTTGCAGCAACCCCTTGCCTaGCTCCCAGTAGTCATCCACTTTGGAGCCTGGCTTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EAFKEAAWVLQQPLA*LPVVIHFGAWLLSW
Trigger: CCAGGAGAGAAGCCAGGCTCCAAAGTGGATGACTACTGGGAGCCAGGCAAGGGGTTGCTGCAAGACCCAGGCCGCTTCCTTGAAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CATCCTGGGCTTCTCGCAAGGCTTGCCGTTTGGGCTCCACCGCCTTaGCTACAAAATGGTACTTGTGCATGGCGCGCACCCACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: HPGLLARLAVWAPPP*LQNGTCAWRAPTGR
Trigger: TCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGAAGCCCAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GTGAAGCTGCCCAGGGAGTCCTGCACCAGGAAGCGCAGCGTGTCCTaGAGCATGTACTTGATGAGCTCCATCAGCTTGCGCAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: VKLPRESCTRKRSVS*SMYLMSSISLRSFD
Trigger: GTCAAAGCTGCGCAAGCTGATGGAGCTCATCAAGTACATGCTGCAGGACACGCTGCGCTTCCTGGTGCAGGACTCCCTGGGCAGCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CAGCTTGCTCACCACATCCTTGGCGTGGACCTCAATGACAATGAGTaGCGAAAGCACCATCCGCTGCATGCGGGACAGCTTCCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: QLAHHILGVDLNDNE*RKHHPLHAGQLPPH
Trigger: GTGAGGGGGAAGCTGTCCCGCATGCAGCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp AGTGGCAGTTCTGAAAGAAGACCCACTTGCCCCTCTCTATGGAGTTaGGCATCATGGCTTCTGCCCGAGGGCCCTGACCCTGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: SGSSERRPTCPSLWS*ASWLLPEGPDPVPR
Trigger: CCTTGGGACAGGGTCAGGGCCCTCGGGCAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAGTGGGTCTTCTTTCAGAACTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CCTCCAGGCGGCTGTACTTGGAGAGGCTTGAGTGGAACAGGGACATaGAGGTCACCTTGTTGCATTCAGCCCGCACCTTGCTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PPGGCTWRGLSGTGT*RSPCCIQPAPCSEL
Trigger: CAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GCTACCTCCATTGTCCAGTATGTCTGGCAGCCAGCGATGGTCACCTaGCCCGGCCAGTTCAGAACCCACTCAGTTCTGAGCATCGTTGGG +
Preference number: 5 (lower is better)
Translates to: ATSIVQYVWQPAMVT*PGQFRTHSVLSIVG
Trigger: CCCAACGATGCTCAGAACTGAGTGGGTTCTGAACTGGCCGGGCCAGGTGACCATCGCTGGCTGCCAGACATACTGGACAATGGAGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TCTGAAAGAAGACCCACTTGCCCCTCTCTATGGAGTTGCGCATCATaGCTTCTGCCCGAGGGCCCTGACCCTGTCCCAAGGAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SERRPTCPSLWSCAS*LLPEGPDPVPRRWQ
Trigger: CTGCCATCTCCTTGGGACAGGGTCAGGGCCCTCGGGCAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAGTGGGTCTTCTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TGTTGTACAGCATCGCCAGCTGCTGGCAGTCCTTCAGCTGCTTCTTaGCCCGCCGCACCTCGTTGGCAATCTCGTGTGCTCGTGCAATCT +
Preference number: 5 (lower is better)
Translates to: CCTASPAAGSPSAAS*PAAPRWQSRVLVQS
Trigger: AGATTGCACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GCATACCAGGGTTGCGCAGGCCTTGGATCAGCGGGATGTACGGCTTaGACTCCTCTATGCGTGTTCGGATATCCAAAGCCACCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AYQGCAGLGSAGCTA*TPLCVFGYPKPPPG
Trigger: GCCAGGAGGTGGCTTTGGATATCCGAACACGCATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp AGTAGAATCTGGGGAAGGCGGTCCGCTTGGTCTCCAGGTACTCGCTaGGGCCCTTCTGTACCAGGTCCAGCAACTTGTTGCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: SRIWGRRSAWSPGTR*GPSVPGPATCCSPS
Trigger: TGAGGGACTGCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGAGTACCTGGAGACCAAGCGGACCGCCTTCCCCAGATTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GTGGGTCCAGCGCTGCGAGAACTGATTGATGACCCCGTTCTCCACTaGCAGAGTGTCATTGGGGAGGCCAGCAATCTGCCAAGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: VGPALRELIDDPVLH*QSVIGEASNLPRAD
Trigger: ATCCGCTCTTGGCAGATTGCTGGCCTCCCCAATGACACTCTGTCAGTGGAGAACGGGGTCATCAATCAGTTCTCGCAGCGCTGGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ATGCGCGGTGTGCTCAAAGCCCACTGCTTTATCTTGCTCAAGCTCTaGTCATTGATGACCCGCCGGCCCTCGGTGGGCATGCAATCCACA +
Preference number: 5 (lower is better)
Translates to: MRGVLKAHCFILLKL*SLMTRRPSVGMQST
Trigger: TGTGGATTGCATGCCCACCGAGGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCACACCGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TTGGGCCTGACATTGATGTTGATCTCATTGGACAGTACCTCCCAGTaGCGGTTCCGCATACCAGGGTTGCGCAGGCCTTGGATCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LGLTLMLISLDSTSQ*RFRIPGLRRPWISG
Trigger: CCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GGAGAGCTGGGGGAACAGCTTGCTACTGATGTTGCCAGCCTCAAGTaGCTCGGCTACCTCCATTGTCCAGTATGTCTGGCAGCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: GELGEQLATDVASLK*LGYLHCPVCLAASD
Trigger: ATCGCTGGCTGCCAGACATACTGGACAATGGAGGTAGCCGAGGCACTTGAGGCTGGCAACATCAGTAGCAAGCTGTTCCCCCAGCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GCTTGCCGTTTGGGCTCCACCGCCTTGGCTACAAAATGGTACTTGTaGATGGCGCGCACCCACTGGCAGATAGATGTGCAGGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: ACRLGSTALATKWYL*MARTHWQIDVQALD
Trigger: GTCCAAAGCCTGCACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GTGTCTCCCAGCTTCAGGACTATGTTCCCTTGCTGCTTGTACGTCTaGTTAAGCAGCACAGGCTCCAGTGCCGGATCCAGCTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: VSPSFRTMFPCCLYV*LSSTGSSAGSSSSP
Trigger: GGGTGAGGAGCTGGATCCGGCACTGGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GAGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTGCTGCAGGTCTaGATGTCTGGGCATGAGCTTGTTAGAGTCGATGCCCTCGCTGGT +
Preference number: 5 (lower is better)
Translates to: EWITALFDGLWVLQV*MSGHELVRVDALAG
Trigger: ACCAGCGAGGGCATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CCCTTTCGCCTCTTGTCCAGCTTGCTGTCGATGAGGTCCTGGGTCTaGTTGGCTGAAGTGCGGGCTGAGAAGGTGAGGAAGTGGCTGATA +
Preference number: 5 (lower is better)
Translates to: PFRLLSSLLSMRSWV*LAEVRAEKVRKWLI
Trigger: TATCAGCCACTTCCTCACCTTCTCAGCCCGCACTTCAGCCAACCAGACCCAGGACCTCATCGACAGCAAGCTGGACAAGAGGCGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp AACACACCCTTTCGCCTCTTGTCCAGCTTGCTGTCGATGAGGTCCTaGGTCTGGTTGGCTGAAGTGCGGGCTGAGAAGGTGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: NTPFRLLSSLLSMRS*VWLAEVRAEKVRKW
Trigger: CCACTTCCTCACCTTCTCAGCCCGCACTTCAGCCAACCAGACCCAGGACCTCATCGACAGCAAGCTGGACAAGAGGCGAAAGGGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TCTCGCAAGGCTTGCCGTTTGGGCTCCACCGCCTTGGCTACAAAATaGTACTTGTGCATGGCGCGCACCCACTGGCAGATAGATGTGCAG +
Preference number: 5 (lower is better)
Translates to: SRKACRLGSTALATK*YLCMARTHWQIDVQ
Trigger: CTGCACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ATGGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTGCTaGAGGTCTGGATGTCTGGGCATGAGCTTGTTAGAGTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: MGKSGSRPCSMVCGC*RSGCLGMSLLESMP
Trigger: GGGCATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CAGCAAGCATCACCAATGAACTGTGTGAAGCTGCCCAGGGAGTCCTaGACCAGGAAGCGCAGCGTGTCCTGCAGCATGTACTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: QQASPMNCVKLPRES*TRKRSVSCSMYLMS
Trigger: GCTCATCAAGTACATGCTGCAGGACACGCTGCGCTTCCTGGTGCAGGACTCCCTGGGCAGCTTCACACAGTTCATTGGTGATGCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TGGCCTTCATGCTACGCTCCACCTCCAGCAGCCAGTCCTCCACATTaGTTGAGGGGTAGATGGAGAAGGAGAGCTTTACCTCTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: WPSCYAPPPAASPPH*LRGRWRRRALPLPP
Trigger: AGGGGGAAGAGGTAAAGCTCTCCTTCTCCATCTACCCCTCAAGCAATGTGGAGGACTGGCTGCTGGAGGTGGAGCGTAGCATGAAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GCCACCACTGATGGATGGCTTCCCTTTCAGCAATGTCATGGCGGCTaGCAGGACTCTGTAACAATTACTCTTGCCAGAGCCTGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ATTDGWLPFQQCHGG*QDSVTITLARACGP
Trigger: GGGCCCACAGGCTCTGGCAAGAGTAATTGTTACAGAGTCCTGGCAGCCGCCATGACATTGCTGAAAGGGAAGCCATCCATCAGTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GCTTGGGCCTTGTTGGCCTTCTCGTTGGCCTTAATCTCCTCTGCCTaGACTGATTTCCGGGTCTCCTCAGCTATGGCTGTGTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: AWALLAFSLALISSA*TDFRVSSAMAVSTL
Trigger: CAAGGTGGACACAGCCATAGCTGAGGAGACCCGGAAATCAGTGCAGGCAGAGGAGATTAAGGCCAACGAGAAGGCCAACAAGGCCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CTCTGTCACATCATTCTTGTTGAGGTTTCGAAGGCTGGCCAGGGCTaGATCCAGGGCTGGGAGGGCCTCATCGAGATCCTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: LCHIILVEVSKAGQG*IQGWEGLIEILLSI
Trigger: GATGCTCAGAAGGATCTCGATGAGGCCCTCCCAGCCCTGGATGCAGCCCTGGCCAGCCTTCGAAACCTCAACAAGAATGATGTGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TTGGCCTGCATTGTGGCGATGCCATCTTCCACTTCGTGCAGGTGGTaGTTCGCCTCTTCTAGTATCCGCTGGGTCACTTCCAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LACIVAMPSSTSCRW*FASSSIRWVTSRSS
Trigger: GGATGACCTGGAAGTGACCCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp AGCCCGTTGATGAGCTTGTCAGCTCTGCCCAGGCGCTGTTCACACTaGTCACACTTCATCTCCAGCTCCTCCTTCTTGGCCACACACTCT +
Preference number: 5 (lower is better)
Translates to: SPLMSLSALPRRCSH*SHFISSSSFLATHS
Trigger: AGAGTGTGTGGCCAAGAAGGAGGAGCTGGAGATGAAGTGTGAGCAGTGTGAACAGCGCCTGGGCAGAGCTGACAAGCTCATCAACGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CCACTGATCCAGAAGACAGGCGGGATGCCATCGTTGATCCAGGAATaGATGAAGTCCAGGCGCAGCAGCAGGTCCATGATCCATGAAGCC +
Preference number: 5 (lower is better)
Translates to: PLIQKTGGMPSLIQE*MKSRRSSRSMIHEA
Trigger: GGCTTCATGGATCATGGACCTGCTGCTGCGCCTGGACTTCATGCATTCCTGGATCAACGATGGCATCCCGCCTGTCTTCTGGATCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CTGGATCTGCTCAAATTCCTCCAGGCGGCTGTACTTGGAGAGGCTTaGGTGGAACAGGGACATGGAGGTCACCTTGTTGCATTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LDLLKFLQAAVLGEA*VEQGHGGHLVAFSP
Trigger: CGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGGAATTTGAGCAGATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TTATTATGGCAGGGAGACGTTTTAGCCAGCACTCAACGAATGGCATaGGCCCTAGGATGCTGGGCTCCAGGTACACCATGCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: LLWQGDVLASTQRMA*ALGCWAPGTPCHSG
Trigger: CCCGCTGTGGCATGGTGTACCTGGAGCCCAGCATCCTAGGGCTCATGCCATTCGTTGAGTGCTGGCTAAAACGTCTCCCTGCCATAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GGCTCATGGCGTCCACGAAGAGGACCAGCCTCAGCTTGGCTGTGTTaGTCTGGTTGTAGTCCTCCATGTACTCCTCGATCACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: GSWRPRRGPASAWLC*SGCSPPCTPRSPAS
Trigger: TGATGCAGGTGATCGAGGAGTACATGGAGGACTACAACCAGATCAACACAGCCAAGCTGAGGCTGGTCCTCTTCGTGGACGCCATGAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GGCCTTGTTGGCCTTCTCGTTGGCCTTAATCTCCTCTGCCTGCACTaGTTTCCGGGTCTCCTCAGCTATGGCTGTGTCCACCTTGATCTG +
Preference number: 5 (lower is better)
Translates to: GLVGLLVGLNLLCLH*FPGLLSYGCVHLDL
Trigger: CAGATCAAGGTGGACACAGCCATAGCTGAGGAGACCCGGAAATCAGTGCAGGCAGAGGAGATTAAGGCCAACGAGAAGGCCAACAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CTGGGCATGAGCTTGTTAGAGTCGATGCCCTCGCTGGTCAACAGCTaGTCAATGTCCAGGCGCAAGTATTGCTGCTTCCTCCTCTCGATC +
Preference number: 5 (lower is better)
Translates to: LGMSLLESMPSLVNS*SMSRRKYCCFLLSI
Trigger: GATCGAGAGGAGGAAGCAGCAATACTTGCGCCTGGACATTGAGCAGCTGTTGACCAGCGAGGGCATCGACTCTAACAAGCTCATGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CAATTACTCTTGCCAGAGCCTGTGGGCCCAACAAGCATGAGGCCGTaGCGTACCACTGTGGTCTCATACAGCTGGATGCACTTGATCAGG +
Preference number: 5 (lower is better)
Translates to: QLLLPEPVGPTSMRP*RTTVVSYSWMHLIR
Trigger: CCTGATCAAGTGCATCCAGCTGTATGAGACCACAGTGGTACGGCACGGCCTCATGCTTGTTGGGCCCACAGGCTCTGGCAAGAGTAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ATCCACCGGCCCGTCGAACATGTACCATTTCTTGTTGGTGTCAGATaGGATGGCCCCGGCCCGGATGAGGGAGGAGAAAATTCCATCTGT +
Preference number: 5 (lower is better)
Translates to: IHRPVEHVPFLVGVR*DGPGPDEGGENSIC
Trigger: ACAGATGGAATTTTCTCCTCCCTCATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGGCCGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CCCCAAACTCTTCCATCTGGGCTTCAAGGAGTTCATCAAACCAGCTaGGGTCTTCCTCATTCACCAGGCGGTCACGGAACACACGGCAGT +
Preference number: 5 (lower is better)
Translates to: PQTLPSGLQGVHQTS*GLPHSPGGHGTHGS
Trigger: ACTGCCGTGTGTTCCGTGACCGCCTGGTGAATGAGGAAGACCGCAGCTGGTTTGATGAACTCCTTGAAGCCCAGATGGAAGAGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TCTCGATACTTGGCCTGCATTGTGGCGATGCCATCTTCCACTTCGTaGAGGTGGTGCTTCGCCTCTTCTAGTATCCGCTGGGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SRYLACIVAMPSSTS*RWCFASSSIRWVTS
Trigger: GGAAGTGACCCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ACGCAGGCAACGGAGAATAAGCAGTTTCTGGAACTCGTCCAGGTATaGGTTCCAGATGCCAGGCAAGAGCTCCCTGTGAGGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: TQATENKQFLELVQV*VPDARQELPVRLST
Trigger: AGTGCTGAGCCTCACAGGGAGCTCTTGCCTGGCATCTGGAACGCATACCTGGACGAGTTCCAGAAACTGCTTATTCTCCGTTGCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp ATCTGCTCAAATTCCTCCAGGCGGCTGTACTTGGAGAGGCTTGAGTaGAACAGGGACATGGAGGTCACCTTGTTGCATTCAGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: ICSNSSRRLYLERLE*NRDMEVTLLHSART
Trigger: GGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGGAATTTGAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GCCACCACCAGCTGCAGCCCTTCCAGCTTCTCCTGGAAGTTGTTCTaGTCCATGAGCTGGATTTTGCGGAACTTCTCCTCATCCTCAACG +
Preference number: 5 (lower is better)
Translates to: ATTSCSPSSFSWKLF*SMSWILRNFSSSST
Trigger: CGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGAAGGGCTGCAGCTGGTGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GATGCCCTTCATGATGCACACAGCTTCAATGACCAGCTTCACTCCTaGGGGTGGGCGCTGCATGGCACGCACCTCTGTCACATCATTCTT +
Preference number: 5 (lower is better)
Translates to: DALHDAHSFNDQLHS*GWALHGTHLCHIIL
Trigger: AAGAATGATGTGACAGAGGTGCGTGCCATGCAGCGCCCACCCCCAGGAGTGAAGCTGGTCATTGAAGCTGTGTGCATCATGAAGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp ACCGCCTTGGCTACAAAATGGTACTTGTGCATGGCGCGCACCCACTaGCAGATAGATGTGCAGGCTTTGGACACCTTGGCAATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TALATKWYLCMARTH*QIDVQALDTLAMAA
Trigger: AGCTGCCATTGCCAAGGTGTCCAAAGCCTGCACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TACTTGGCCTGCATTGTGGCGATGCCATCTTCCACTTCGTGCAGGTaGTGCTTCGCCTCTTCTAGTATCCGCTGGGTCACTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: YLACIVAMPSSTSCR*CFASSSIRWVTSRS
Trigger: TGACCTGGAAGTGACCCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TCATCGACAGGGTTGCCCTCGGAGGAACTGAGGCGGTACAGTATCTaGTCCTCAATGTCCTTCAGCTCCTGGCGCATCTTGGCATTACTG +
Preference number: 5 (lower is better)
Translates to: SSTGLPSEELRRYSI*SSMSFSSWRILALL
Trigger: CAGTAATGCCAAGATGCGCCAGGAGCTGAAGGACATTGAGGACCAGATACTGTACCGCCTCAGTTCCTCCGAGGGCAACCCTGTCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp AGGGGCCACAGCACACATTCCCAAGCTTGTCTAAGGTTCCAGGGCTaGGGATGTCAGAATAGAATCCGCGCTGCTTCATCAGGGGGTACT +
Preference number: 5 (lower is better)
Translates to: RGHSTHSQACLRFQG*GCQNRIRAASSGGT
Trigger: AGTACCCCCTGATGAAGCAGCGCGGATTCTATTCTGACATCCTCAGCCCTGGAACCTTAGACAAGCTTGGGAATGTGTGCTGTGGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GTTGGGGCACAGCATGGGTGGCCAGGATACCCTTGTCAAAGAGGTTaGGCAGAATCATCTCGAAGTGCTCTAGAGGCGTGCTGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: VGAQHGWPGYPCQRG*AESSRSALEACCSA
Trigger: TGCACTACAGCACGCCTCTAGAGCACTTCGAGATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGTGCCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CTCTGTAACAATTACTCTTGCCAGAGCCTGTGGGCCCAACAAGCATaGGGCCGTGCCGTACCACTGTGGTCTCATACAGCTGGATGCACT +
Preference number: 5 (lower is better)
Translates to: LCNNYSCQSLWAQQA*GRAVPLWSHTAGCT
Trigger: AGTGCATCCAGCTGTATGAGACCACAGTGGTACGGCACGGCCTCATGCTTGTTGGGCCCACAGGCTCTGGCAAGAGTAATTGTTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GTGGCGGGCCAGCTCTGCGAGGTACTCAACACATTTGCTGGCCACTaGCTGGTGGATAAATACGCAAACCTGAATCAGCCCCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: VAGQLCEVLNTFAGH*LVDKYANLNQPLNH
Trigger: GTGATTCAGGGGCTGATTCAGGTTTGCGTATTTATCCACCAGTCAGTGGCCAGCAAATGTGTTGAGTACCTCGCAGAGCTGGCCCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CAAGAGCCAGATAACAGCCATCTCGGTATACAGCTCTTTGGGCCGTaGCTCAGCCAGCTGGAAATTCATGGAGTCCCAGCGAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: QEPDNSHLGIQLFGP*LSQLEIHGVPASTF
Trigger: GAAGGTGCTCGCTGGGACTCCATGAATTTCCAGCTGGCTGAGTCACGGCCCAAAGAGCTGTATACCGAGATGGCTGTTATCTGGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp GGGAACAGGTCAGACACAATCCCTGAGAAGAGCTTGAGGTCTTCCTaGAGGAACTTCGGCACATTCACATCTCGAATGGCCCGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GNRSDTIPEKSLRSS*RNFGTFTSRMARRQ
Trigger: CTGCCTTCGGGCCATTCGAGATGTGAATGTGCCGAAGTTCCTGCAGGAAGACCTCAAGCTCTTCTCAGGGATTGTGTCTGACCTGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TCACGGAACACACGGCAGTTCTCATGGTACCATAGCCGCAGCAGCTaGACCTTGTCCTCAACCTTAGATGGTTCAGCCATGAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: SRNTRQFSWYHSRSS*TLSSTLDGSAMSIP
Trigger: GGGAATGCTCATGGCTGAACCATCTAAGGTTGAGGACAAGGTGCAGCTGCTGCGGCTATGGTACCATGAGAACTGCCGTGTGTTCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CAAGGACGCCAACTTCACACCATCTATAGTCCAGTTCCTGATTCTTaGGGTCCTCGTGCCCCAGATCGTCGTCTGTGGGAAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: QGRQLHTIYSPVPDS*GPRAPDRRLWEEGL
Trigger: AAGCCCTTCTTCCCACAGACGACGATCTGGGGCACGAGGACCCCAAGAATCAGGAACTGGACTATAGATGGTGTGAAGTTGGCGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TGCAGCCCTTCCAGCTTCTCCTGGAAGTTGTTCTGGTCCATGAGCTaGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: CSPSSFSWKLFWSMS*ILRNFSSSSTCCCR
Trigger: GCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGAAGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GCTCCACCTCCAGCAGCCAGTCCTCCACATTGCTTGAGGGGTAGATaGAGAAGGAGAGCTTTACCTCTTCCCCCTCTGCTGAATACATGT +
Preference number: 5 (lower is better)
Translates to: APPPAASPPHCLRGR*RRRALPLPPLLNTC
Trigger: ACATGTATTCAGCAGAGGGGGAAGAGGTAAAGCTCTCCTTCTCCATCTACCCCTCAAGCAATGTGGAGGACTGGCTGCTGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CCAACAAGCATGAGGCCGTGCCGTACCACTGTGGTCTCATACAGCTaGATGCACTTGATCAGGAAGCCCTCCACATCCTTGAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PTSMRPCRTTVVSYS*MHLIRKPSTSLRLF
Trigger: GAACAACCTCAAGGATGTGGAGGGCTTCCTGATCAAGTGCATCCAGCTGTATGAGACCACAGTGGTACGGCACGGCCTCATGCTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp ATGTCCTTCAGCTCCTGGCGCATCTTGGCATTACTGACAATCAGCTaGTTCTTGGCCTCTTCCAGGTCAGGTCGTTCCTCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: MSFSSWRILALLTIS*FLASSRSGRSSATT
Trigger: GGTAGTGGCTGAGGAACGACCTGACCTGGAAGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCTGAAGGACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp AGCAGAATATTCTCAGCCACATCTTCTACCAACTCCTCCCGGCTCTaGCCGCCCATAGAAGAGGATTTGGGCTGCAGCTGGAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: SRIFSATSSTNSSRL*PPIEEDLGCSWRMA
Trigger: TGCCATTCTCCAGCTGCAGCCCAAATCCTCTTCTATGGGCGGCCAGAGCCGGGAGGAGTTGGTAGAAGATGTGGCTGAGAATATTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp AGCAGCCGCGTGGTAGCACCAATGATCTGCTGCTCCACACGCTCCTaGAAGTCCTCAGGAATGACGAATGAGTCAACTTTTGGGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SSRVVAPMICCSTRS*KSSGMTNESTFGVN
Trigger: GTTCACCCCAAAAGTTGACTCATTCGTCATTCCTGAGGACTTTCAGGAGCGTGTGGAGCAGCAGATCATTGGTGCTACCACGCGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CAGGGACGGGCTTCCTGTTTTGTGAGCCTGGCTCCAAGCCCATGTTaGGCCACTCTGTGGGAGTCCGGCAATCAAACTCTTCATTATCAA +
Preference number: 5 (lower is better)
Translates to: QGRASCFVSLAPSPC*ATLWESGNQTLHYQ
Trigger: TTGATAATGAAGAGTTTGATTGCCGGACTCCCACAGAGTGGCTCAACATGGGCTTGGAGCCAGGCTCACAAAACAGGAAGCCCGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CCAGCTGCAGCCCTTCCAGCTTCTCCTGGAAGTTGTTCTGGTCCATaGGCTGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: PAAALPASPGSCSGP*AGFCGTSPHPQRVA
Trigger: AGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGAAGGGCTGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GGTCTCCCAGGAGTTGATGCGCTGCTCAAAGGGTTTCTTGTACGGTaGGAAGGACATACTCTGAGTCATGACGATGTGGTCGTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: GLPGVDALLKGFLVR*EGHTLSHDDVVVEQ
Trigger: CTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAACCCTTTGAGCAGCGCATCAACTCCTGGGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TATATGGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTaGTGCAGGTCTGGATGTCTGGGCATGAGCTTGTTAGAGTCGATG +
Preference number: 5 (lower is better)
Translates to: YMGKSGSRPCSMVCG*CRSGCLGMSLLESM
Trigger: CATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ACGGGTATGTACTCCATGCGTGTGAGGTCAATGTCCTTCTCTGTCTaGTCGGCAATCCTGACCTTAGCCTGGATCTCAGCAGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: TGMYSMRVRSMSFSV*SAILTLAWISAAFI
Trigger: GATGAAGGCTGCTGAGATCCAGGCTAAGGTCAGGATTGCCGAGCAGACAGAGAAGGACATTGACCTCACACGCATGGAGTACATACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ACCAACTCCTCCCGGCTCTGGCCGCCCATAGAAGAGGATTTGGGCTaGAGCTGGAGAATGGCATTAAATAAGGCAAACGTCTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: TNSSRLWPPIEEDLG*SWRMALNKANVSFW
Trigger: CCAGAATGAGACGTTTGCCTTATTTAATGCCATTCTCCAGCTGCAGCCCAAATCCTCTTCTATGGGCGGCCAGAGCCGGGAGGAGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GAGATATATGGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTTGTaGGTGCTGCAGGTCTGGATGTCTGGGCATGAGCTTGTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: EIYGEEWITALFDGL*VLQVWMSGHELVRV
Trigger: GACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GATCATTCATCCAGCTCTCAGACCACCGCAGCCAGTCTGAGGCTGTaGTCCAGAGGTCCAGGTATGGTTGGAATTCCTTCACCATTCTTG +
Preference number: 5 (lower is better)
Translates to: DHSSSSQTTAASLRL*SRGPGMVGIPSPFL
Trigger: CAAGAATGGTGAAGGAATTCCAACCATACCTGGACCTCTGGACCACAGCCTCAGACTGGCTGCGGTGGTCTGAGAGCTGGATGAATGATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CACGGTGTCCATGGTGGGCACAATGATGTTGCAGTAGTTGGTGTCTaGCATCATGGTGAATGGGGCCGAGTAGTCCATCCACTTTACCCA +
Preference number: 5 (lower is better)
Translates to: HGVHGGHNDVAVVGV*HHGEWGRVVHPLYP
Trigger: TGGGTAAAGTGGATGGACTACTCGGCCCCATTCACCATGATGCCAGACACCAACTACTGCAACATCATTGTGCCCACCATGGACACCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp AACCTGAATCAGCCCCTGAATCACTTCCTCCGAACATTCCAGTTCTaGGATCTCACTCAGGAACGTGGTGGCCACAGATTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NLNQPLNHFLRTFQF*DLTQERGGHRFQGL
Trigger: GAGGCCCTGAAATCTGTGGCCACCACGTTCCTGAGTGAGATCCCAGAACTGGAATGTTCGGAGGAAGTGATTCAGGGGCTGATTCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp AATGTTGTCCTTGTCAAACTTGAAGAGGCTTTCAAGGAAGCGGCCTaGGTCTTGCAGCAACCCCTTGCCTGGCTCCCAGTAGTCATCCAC +
Preference number: 5 (lower is better)
Translates to: NVVLVKLEEAFKEAA*VLQQPLAWLPVVIH
Trigger: GTGGATGACTACTGGGAGCCAGGCAAGGGGTTGCTGCAAGACCCAGGCCGCTTCCTTGAAAGCCTCTTCAAGTTTGACAAGGACAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TCCTCCCGGCTCTGGCCGCCCATAGAAGAGGATTTGGGCTGCAGCTaGAGAATGGCATTAAATAAGGCAAACGTCTCATTCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SSRLWPPIEEDLGCS*RMALNKANVSFWAK
Trigger: CTTTGCCCAGAATGAGACGTTTGCCTTATTTAATGCCATTCTCCAGCTGCAGCCCAAATCCTCTTCTATGGGCGGCCAGAGCCGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GGGGCACAGGTAGAAGTCCTGGTTCTGGACCTTTCGGTTAGCTTCTaGCAAGAGCCAGATAACAGCCATCTCGGTATACAGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GAQVEVLVLDLSVSF*QEPDNSHLGIQLFG
Trigger: CCCAAAGAGCTGTATACCGAGATGGCTGTTATCTGGCTCTTGCCAGAAGCTAACCGAAAGGTCCAGAACCAGGACTTCTACCTGTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GCTCAAAGGGTTTCTTGTACGGTGAGAAGGACATACTCTGAGTCATaGCGATGTGGTCGTCGAGCAGTTGTGAGGCTTCGTCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: AQRVSCTVRRTYSES*RCGRRAVVRLRLGS
Trigger: AGAGCCCAGACGAAGCCTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAACCCTTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp TCCATGAGCTGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTaGTGCCGCACCATATCTATCTGCCCAAGGATCTTAGAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SMSWILRNFSSSSTC*CRTISICPRILEGQ
Trigger: CTGGCCCTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp AAGCGTTCCACCCTCTGTTGCTGTGCCTTCTGGATGGTAGTGATCTaGTGTGCCACCACCGATAGCACCTCAATGTCGATCCGATTAAAC +
Preference number: 5 (lower is better)
Translates to: KRSTLCCCAFWMVVI*CATTDSTSMSIRLN
Trigger: GTTTAATCGGATCGACATTGAGGTGCTATCGGTGGTGGCACAGCAGATCACTACCATCCAGAAGGCACAGCAACAGAGGGTGGAACGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CCAAAGATGTTGTCAAGCATGTTCTCCAGATTCTCCACGGTCTCCTaGCAGCGAACCTTTTCGTCGGCTAGCCCGTTGATGAGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PKMLSSMFSRFSTVS*QRTFSSASPLMSLS
Trigger: TGACAAGCTCATCAACGGGCTAGCCGACGAAAAGGTTCGCTGGCAGGAGACCGTGGAGAATCTGGAGAACATGCTTGACAACATCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CTTGTTGCATTCAGCCCGCACCTTGCTCAGAGCTGTGATGACTTCTaGTCGAGTGAGCAGGGACACAAAAGTGAAGTCCTCCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LVAFSPHLAQSCDDF*SSEQGHKSEVLLLL
Trigger: GAGCAAAAGGAGGACTTCACTTTTGTGTCCCTGCTCACTCGACCAGAAGTCATCACAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CTGACTACATTCTCATCGATCAGCTTGCTCACCACATCCTTGGCGTaGACCTCAATGACAATGAGTGCCGAAAGCACCATCCGCTGCATG +
Preference number: 5 (lower is better)
Translates to: LTTFSSISLLTTSLA*TSMTMSAESTIRCM
Trigger: CATGCAGCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAATGTAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GAACTGAGGCGGTACAGTATCTGGTCCTCAATGTCCTTCAGCTCCTaGCGCATCTTGGCATTACTGACAATCAGCTGGTTCTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ELRRYSIWSSMSFSS*RILALLTISWFLAS
Trigger: AGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCTGAAGGACATTGAGGACCAGATACTGTACCGCCTCAGTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TTAGTGACTTTATCCCCACGCAGGCAACGGAGAATAAGCAGTTTCTaGAACTCGTCCAGGTATGCGTTCCAGATGCCAGGCAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LVTLSPRRQRRISSF*NSSRYAFQMPGKSS
Trigger: GGAGCTCTTGCCTGGCATCTGGAACGCATACCTGGACGAGTTCCAGAAACTGCTTATTCTCCGTTGCCTGCGTGGGGATAAAGTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GTCCTGCAGCATGTACTTGATGAGCTCCATCAGCTTGCGCAGCTTTaGCATGAGGTACACCTCCCAGTTGGTCTCATACAGGTTGTACCA +
Preference number: 5 (lower is better)
Translates to: VLQHVLDELHQLAQL*HEVHLPVGLIQVVP
Trigger: TGGTACAACCTGTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCTGATGGAGCTCATCAAGTACATGCTGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GAAGGACATACTCTGAGTCATGACGATGTGGTCGTCGAGCAGTTGTaGGGCTTCGTCTGGGCTCTTGAGGATATAGGTGTCTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: EGHTLSHDDVVVEQL*GFVWALEDIGVCLL
Trigger: AAGGAGACAGACACCTATATCCTCAAGAGCCCAGACGAAGCCTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp ATGCGCTGCTCAAAGGGTTTCTTGTACGGTGAGAAGGACATACTCTaGGTCATGACGATGTGGTCGTCGAGCAGTTGTGAGGCTTCGTCT +
Preference number: 5 (lower is better)
Translates to: MRCSKGFLYGEKDIL*VMTMWSSSSCEASS
Trigger: AGACGAAGCCTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAACCCTTTGAGCAGCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp AGTCTCCTCTTCCTTGATGGTAGGGAACAGGTCAGACACAATCCCTaGGAAGAGCTTGAGGTCTTCCTGCAGGAACTTCGGCACATTCAC +
Preference number: 5 (lower is better)
Translates to: SLLFLDGREQVRHNP*EELEVFLQELRHIH
Trigger: GTGAATGTGCCGAAGTTCCTGCAGGAAGACCTCAAGCTCTTCTCAGGGATTGTGTCTGACCTGTTCCCTACCATCAAGGAAGAGGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CAGACCAGGGAGAAGATGAACCAGGGCTCTATCAGCTCTGGGATATaGCTCAACTTTTCAGAGGGTATCTTCTTGAGGCCCTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: QTREKMNQGSISSGI*LNFSEGIFLRPSLG
Trigger: ACCCAGAGAGGGCCTCAAGAAGATACCCTCTGAAAAGTTGAGTCATATCCCAGAGCTGATAGAGCCCTGGTTCATCTTCTCCCTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp AACTTCTCCTCATCCTCAACGTGTTGCTGCCGCACCATATCTATCTaGCCAAGGATCTTAGAGGGCCAGTTGTTGGCAGCCCATTTGTCA +
Preference number: 5 (lower is better)
Translates to: NFSSSSTCCCRTISI*PRILEGQLLAAHLS
Trigger: TGACAAATGGGCTGCCAACAACTGGCCCTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ATGAGCTGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTGCTaGCGCACCATATCTATCTGCCCAAGGATCTTAGAGGGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: MSWILRNFSSSSTCC*RTISICPRILEGQL
Trigger: CAACTGGCCCTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CTCTTCATTATCAAACACCTTCAGTGGGAGATATATGGGGAAGAGTaGATCACGGCCCTGTTCGATGGTTTGTGGGTGCTGCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LFIIKHLQWEIYGEE*ITALFDGLWVLQVW
Trigger: CCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTCCCACTGAAGGTGTTTGATAATGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp ATAAAGATGTCCTCCATCACCAGCTTCTCCAGTTGGGGCACAGCATaGGTGGCCAGGATACCCTTGTCAAAGAGGTTGAGCAGAATCATC +
Preference number: 5 (lower is better)
Translates to: IKMSSITSFSSWGTA*VARIPLSKRLSRII
Trigger: GATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGTGCCCCAACTGGAGAAGCTGGTGATGGAGGACATCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TGGAAGGGACAGACTTTGTTGAAGGCCACCCCAAACTCTTCCATCTaGGCTTCAAGGAGTTCATCAAACCAGCTGCGGTCTTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: WKGQTLLKATPNSSI*ASRSSSNQLRSSSF
Trigger: GAATGAGGAAGACCGCAGCTGGTTTGATGAACTCCTTGAAGCCCAGATGGAAGAGTTTGGGGTGGCCTTCAACAAAGTCTGTCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CACCTTGGCAATGGCAGCTGGCTGGAACTCCTCATTGTCGATATATaGCTGGATGGCTTTGATAACTGCCTCCCCAATGTTGTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: HLGNGSWLELLIVDI*LDGFDNCLPNVVLV
Trigger: GACAAGGACAACATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CTGGCAGATAGATGTGCAGGCTTTGGACACCTTGGCAATGGCAGCTaGCTGGAACTCCTCATTGTCGATATATGGCTGGATGGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LADRCAGFGHLGNGS*LELLIVDIWLDGFD
Trigger: ATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTGCACATCTATCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CTCCTCATTCATGGTAGGGTTTTCTCTCTTAAGGTTCCCGGCTGCTaGGATGACAGTCTTCACTGCTCTCATCCCGAAGTCATAGTGGTC +
Preference number: 5 (lower is better)
Translates to: LLIHGRVFSLKVPGC*DDSLHCSHPEVIVV
Trigger: GACCACTATGACTTCGGGATGAGAGCAGTGAAGACTGTCATCTCAGCAGCCGGGAACCTTAAGAGAGAAAACCCTACCATGAATGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GAGCTCCCTGTGAGGCTCAGCACTGTCAAAGATGGCCTGGAATTCTaGGAGGTACATCACGAAGTCATTAGAGAAGGTGGCAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: ELPVRLSTVKDGLEF*EVHHEVIREGGKSW
Trigger: CCAACTTTTGCCACCTTCTCTAATGACTTCGTGATGTACCTCTCAGAATTCCAGGCCATCTTTGACAGTGCTGAGCCTCACAGGGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp ACCTCCTGGCAGGCTGGGATGTCCTTGAACTGCTTCACACATTTGTaGATGGTCTTGAACGACTCAATGACATTCTTCTCCAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TSWQAGMSLNCFTHL*MVLNDSMTFFSSCS
Trigger: TGAGCAGCTGGAGAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATGTGTGAAGCAGTTCAAGGACATCCCAGCCTGCCAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TACACTCCAGACCAGGGAGAAGATGAACCAGGGCTCTATCAGCTCTaGGATATGACTCAACTTTTCAGAGGGTATCTTCTTGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: YTPDQGEDEPGLYQL*DMTQLFRGYLLEAL
Trigger: GAGGGCCTCAAGAAGATACCCTCTGAAAAGTTGAGTCATATCCCAGAGCTGATAGAGCCCTGGTTCATCTTCTCCCTGGTCTGGAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GGGCACAATGATGTTGCAGTAGTTGGTGTCTGGCATCATGGTGAATaGGGCCGAGTAGTCCATCCACTTTACCCAGGAAACCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GHNDVAVVGVWHHGE*GRVVHPLYPGNLFV
Trigger: AACAAACAGGTTTCCTGGGTAAAGTGGATGGACTACTCGGCCCCATTCACCATGATGCCAGACACCAACTACTGCAACATCATTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TTCTTCTGCAAATTTATAGAGGTCAGCAGCAGGGTCAGTACCAGGTaGCAGCACGAAGATGAGGGGCGTTGTGGAGTTGGACTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: FFCKFIEVSSRVSTR*QHEDEGRCGVGLFE
Trigger: TTCAAAGAGTCCAACTCCACAACGCCCCTCATCTTCGTGCTGTCACCTGGTACTGACCCTGCTGCTGACCTCTATAAATTTGCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp AAGGCAAACGTCTCATTCTGGGCAAAGGTGATGTTGGCGTTGTCATaGAGACCGAAAATCTCAGGCATGTCATTGAGAGGAAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KANVSFWAKVMLALS*RPKISGMSLRGRLL
Trigger: CAAGAGCCTTCCTCTCAATGACATGCCTGAGATTTTCGGTCTGCATGACAACGCCAACATCACCTTTGCCCAGAATGAGACGTTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp TTGGCAATGGCAGCTGGCTGGAACTCCTCATTGTCGATATATGGCTaGATGGCTTTGATAACTGCCTCCCCAATGTTGTCCTTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: LAMAAGWNSSLSIYG*MALITASPMLSLSN
Trigger: GTTTGACAAGGACAACATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp CAGATAGATGTGCAGGCTTTGGACACCTTGGCAATGGCAGCTGGCTaGAACTCCTCATTGTCGATATATGGCTGGATGGCTTTGATAACT +
Preference number: 5 (lower is better)
Translates to: QIDVQALDTLAMAAG*NSSLSIYGWMALIT
Trigger: AGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTGCACATCTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp GCAGTCAAGGAGCTTGAGGAGGCTCATTGTCAGGTTGCTGTTAGTTaGGGCAATCACTTCCTTCACTGTGTTCCGAACAAAGTTGATGGA +
Preference number: 5 (lower is better)
Translates to: AVKELEEAHCQVAVS*GNHFLHCVPNKVDG
Trigger: TCCATCAACTTTGTTCGGAACACAGTGAAGGAAGTGATTGCCTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTCCTTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TTGAAACCCAGGGGCCCAAATTTACGGCGTTCAAGTGCATTTCCATaGAACAAACACAGAGATAGCAGCAGGGACTTGAACTCCACTACC +
Preference number: 5 (lower is better)
Translates to: LKPRGPNLRRSSAFP*NKHRDSSRDLNSTT
Trigger: GGTAGTGGAGTTCAAGTCCCTGCTGCTATCTCTGTGTTTGTTTCATGGAAATGCACTTGAACGCCGTAAATTTGGGCCCCTGGGTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 90 bp GGCAATCAAACTCTTCATTATCAAACACCTTCAGTGGGAGATATATaGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GNQTLHYQTPSVGDI*GRVDHGPVRWFVGA
Trigger: AGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTCCCACTGAAGGTGTTTGATAATGAAGAGTTTGATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp CATCATCTTACTCTCACTGGTGATGAGCTCATAAGACTTTACATCTaGGCCTGGCGACATGAAGTCCCCATAAAGAATGGGTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HHLTLTGDELIRLYI*AWRHEVPIKNGLEG
Trigger: CCCTTCCAACCCATTCTTTATGGGGACTTCATGTCGCCAGGCTCAGATGTAAAGTCTTATGAGCTCATCACCAGTGAGAGTAAGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 90 bp CATTTGTGCATGGTCTTGAACGACTCAATGACATTCTTCTCCAGCTaGTCAGCATCAATGGCTGACAGAGGATCATTCATCCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: HLCMVLNDSMTFFSS*SASMADRGSFIQLS
Trigger: TGAGAGCTGGATGAATGATCCTCTGTCAGCCATTGATGCTGAGCAGCTGGAGAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 90 bp TATAGAGAAGATGCGTTTCTTGCTGACTTCATCCATCTCAATGAATaGCAGGTAGTTGAAGTGGCGTGTCAGCCTTGGAGTGATAGCGTT +
Preference number: 5 (lower is better)
Translates to: YREDAFLADFIHLNE*QVVEVACQPWSDSV
Trigger: AACGCTATCACTCCAAGGCTGACACGCCACTTCAACTACCTGTCATTCATTGAGATGGATGAAGTCAGCAAGAAACGCATCTTCTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CTGCGGCCACTACCACCCACACCCAACAGGAGCGCATaGCCCAGAGCCTGGCGCAGCGTCCGGCTGATGCGG +
Preference number: 6 (lower is better)
Translates to: LRPLPPTPNRSA*PRAWRSVRLMR
Trigger: CCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGCGCTCCTGTTGGGTGTGGGTGGTAGTGGCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GCACAGAAGAGGAGCTGGATCCTCGGGACCCAGTACTaGGTGGCCAGGAGTGGTGGCCTTCCCGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: AQKRSWILGTQY*VARSGGLPAGV
Trigger: CACCCCTGCGGGAAGGCCACCACTCCTGGCCACCCAGTACTGGGTCCCGAGGATCCAGCTCCTCTTCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CCACCCACACCCAACAGGAGCGCATTGCCCAGAGCCTaGCGCAGCGTCCGGCTGATGCGGCAGATATGGCTC +
Preference number: 6 (lower is better)
Translates to: PPTPNRSALPRA*RSVRLMRQIWL
Trigger: GAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGCGCTCCTGTTGGGTGTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGAGCGCATTGCCCAGAGCCTGGCGCAGCGTCCGGCTaGTGCGGCAGATATGGCTCATGGCGTCCACGAAGA +
Preference number: 6 (lower is better)
Translates to: GAHCPEPGAASG*CGRYGSWRPRR
Trigger: TCTTCGTGGACGCCATGAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCTGGGCAATGCGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CTGGATCCTCGGGACCCAGTACTGGGTGGCCAGGAGTaGTGGCCTTCCCGCAGGGGTGATCCCTCCATTCAG +
Preference number: 6 (lower is better)
Translates to: LDPRDPVLGGQE*WPSRRGDPSIQ
Trigger: CTGAATGGAGGGATCACCCCTGCGGGAAGGCCACCACTCCTGGCCACCCAGTACTGGGTCCCGAGGATCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AGAGCCTGGCGCAGCGTCCGGCTGATGCGGCAGATATaGCTCATGGCGTCCACGAAGAGGACCAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RAWRSVRLMRQI*LMASTKRTSLS
Trigger: GCTGAGGCTGGTCCTCTTCGTGGACGCCATGAGCCATATCTGCCGCATCAGCCGGACGCTGCGCCAGGCTCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCTCTGGCCAGGCAGCTAAGATGCTCCAGGACGCTCTaGCCCTTGCGCATGCGCGGTGTGCTCAAAGCCCAC +
Preference number: 6 (lower is better)
Translates to: SLARQLRCSRTL*PLRMRGVLKAH
Trigger: GTGGGCTTTGAGCACACCGCGCATGCGCAAGGGGCAGAGCGTCCTGGAGCATCTTAGCTGCCTGGCCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GATCCTCGGGACCCAGTACTGGGTGGCCAGGAGTGGTaGCCTTCCCGCAGGGGTGATCCCTCCATTCAGGAT +
Preference number: 6 (lower is better)
Translates to: DPRDPVLGGQEW*PSRRGDPSIQD
Trigger: ATCCTGAATGGAGGGATCACCCCTGCGGGAAGGCCACCACTCCTGGCCACCCAGTACTGGGTCCCGAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TGCCCCTTGCGCATGCGCGGTGTGCTCAAAGCCCACTGCTTTATCTaGCTCAAGCTCTGCTCATTGATGACCCGCCGGCCCTCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: CPLRMRGVLKAHCFI*LKLCSLMTRRPSVG
Trigger: GCCCACCGAGGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCACACCGCGCATGCGCAAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp ACTGGGTGGCCAGGAGTGGTGGCCTTCCCGCAGGGGTaGTCCCTCCATTCAGGATGGGCATCCCCATCTCAT +
Preference number: 6 (lower is better)
Translates to: TGWPGVVAFPQG*SLHSGWASPSH
Trigger: ATGAGATGGGGATGCCCATCCTGAATGGAGGGATCACCCCTGCGGGAAGGCCACCACTCCTGGCCACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCATCGCCAGCTGCTGGCAGTCCTTCAGCTGCTTCTTaGCCCGCCGCACCTCGTTGGCAATCTCGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: ASPAAGSPSAAS*PAAPRWQSRVL
Trigger: GAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CTGTGCCAGCTGGGCCAGCTGGCGCACCTCCAAACTTaGGGTGCAAGGCTCCAGTCAGGGTCAGATAGCACC +
Preference number: 6 (lower is better)
Translates to: LCQLGQLAHLQT*GARLQSGSDST
Trigger: GGTGCTATCTGACCCTGACTGGAGCCTTGCACCTCAAGTTTGGAGGTGCGCCAGCTGGCCCAGCTGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTTGCCCCTCTCTATGGAGTTGCGCATCATGGCTTCTaGCCGAGGGCCCTGACCCTGTCCCAAGGAGATGGC +
Preference number: 6 (lower is better)
Translates to: LAPLYGVAHHGF*PRALTLSQGDG
Trigger: GCCATCTCCTTGGGACAGGGTCAGGGCCCTCGGGCAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AGACCCACTTGCCCCTCTCTATGGAGTTGCGCATCATaGCTTCTGCCCGAGGGCCCTGACCCTGTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: RPTCPSLWSCAS*LLPEGPDPVPR
Trigger: CCTTGGGACAGGGTCAGGGCCCTCGGGCAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAGTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GCCAGGCAGCTAAGATGCTCCAGGACGCTCTGCCCCTaGCGCATGCGCGGTGTGCTCAAAGCCCACTGCTTT +
Preference number: 6 (lower is better)
Translates to: ARQLRCSRTLCP*RMRGVLKAHCF
Trigger: AAAGCAGTGGGCTTTGAGCACACCGCGCATGCGCAAGGGGCAGAGCGTCCTGGAGCATCTTAGCTGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GACAGTACCTCCCAGTGCCGGTTCCGCATACCAGGGTaGCGCAGGCCTTGGATCAGCGGGATGTACGGCTTG +
Preference number: 6 (lower is better)
Translates to: DSTSQCRFRIPG*RRPWISGMYGL
Trigger: CAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TGGGGAAGGCGGTCCGCTTGGTCTCCAGGTACTCGCTaGGGCCCTTCTGTACCAGGTCCAGCAACTTGTTGC +
Preference number: 6 (lower is better)
Translates to: WGRRSAWSPGTR*GPSVPGPATCC
Trigger: GCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGAGTACCTGGAGACCAAGCGGACCGCCTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CTGTCGGCCCGATACACAGCACAGGCTTGTGGTTGGTaGGCAGCATGCCCAGCAGGTAGGACATCTGCACGG +
Preference number: 6 (lower is better)
Translates to: LSARYTAQACGW*AACPAGRTSAR
Trigger: CCGTGCAGATGTCCTACCTGCTGGGCATGCTGCTCACCAACCACAAGCCTGTGCTGTGTATCGGGCCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CCCAGTACTCATAGAGTGTTGTACGGTACTGGCCCGTaGAGGGGCCCAGGTAGGCCACAAAGCCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PSTHRVLYGTGP*RGPGRPQSRQP
Trigger: TGGCTGCCGGCTTTGTGGCCTACCTGGGCCCCTTCACGGGCCAGTACCGTACAACACTCTATGAGTACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp AAGATGCGCTCGCGGTTGTTGTACAGCATCGCCAGCTaGTGGCAGTCCTTCAGCTGCTTCTTGACCCGCCGC +
Preference number: 6 (lower is better)
Translates to: KMRSRLLYSIAS*WQSFSCFLTRR
Trigger: GCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACAACCGCGAGCGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ACCTCAATGACAATGAGTGCCGAAAGCACCATCCGCTaGATGCGGGACAGCTTCCCCCTCACCAGGGCCACC +
Preference number: 6 (lower is better)
Translates to: TSMTMSAESTIR*MRDSFPLTRAT
Trigger: GGTGGCCCTGGTGAGGGGGAAGCTGTCCCGCATGCAGCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCAAGTGCCTCGGCTACCTCCATTGTCCAGTATGTCTaGCAGCCAGCGATGGTCACCTGGCCCGGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: SSASATSIVQYV*QPAMVTWPGQF
Trigger: GAACTGGCCGGGCCAGGTGACCATCGCTGGCTGCCAGACATACTGGACAATGGAGGTAGCCGAGGCACTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGCATCGCCAGCTGCTGGCAGTCCTTCAGCTGCTTCTaGACCCGCCGCACCTCGTTGGCAATCTCGTGTGCT +
Preference number: 6 (lower is better)
Translates to: SIASCWQSFSCF*TRRTSLAISCA
Trigger: AGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GCATCCACCGGCCCGTCGAACATGTACCATTTCTTGTaGGTGTCAGATGCGATGGCCCCGGCCCGGATGAGG +
Preference number: 6 (lower is better)
Translates to: ASTGPSNMYHFL*VSDAMAPARMR
Trigger: CCTCATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGGCCGGTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACGGCATCCACCGGCCCGTCGAACATGTACCATTTCTaGTTGGTGTCAGATGCGATGGCCCCGGCCCGGATG +
Preference number: 6 (lower is better)
Translates to: TASTGPSNMYHF*LVSDAMAPARM
Trigger: CATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGGCCGGTGGATGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CAGTACCTCCCAGTGCCGGTTCCGCATACCAGGGTTGCGCAGGCCTaGGATCAGCGGGATGTACGGCTTGAACTCCTCTATGCGTGTTCG +
Preference number: 6 (lower is better)
Translates to: QYLPVPVPHTRVAQA*DQRDVRLELLYACS
Trigger: CGAACACGCATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCTATCCAGACGGCATCCACCGGCCCGTCGAACATGTACCATTTCTaGTTGGTGTCAGATGCGATGGCCCCGGCCCGGATGAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SIQTASTGPSNMYHF*LVSDAMAPARMREE
Trigger: CTCCTCCCTCATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGGCCGGTGGATGCCGTCTGGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCATCCTGGGCTTCTCGCAAGGCTTGCCGTTTGGGCTCCACCGCCTaGGCTACAAAATGGTACTTGTGCATGGCGCGCACCCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSWASRKACRLGSTA*ATKWYLCMARTHWQ
Trigger: CTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGAAGCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp ACACACCCTTTCGCCTCTTGTCCAGCTTGCTGTCGATaGGGTCCTGGGTCTGGTTGGCTGAAGTGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: THPFASCPACCR*GPGSGWLKCGL
Trigger: CAGCCCGCACTTCAGCCAACCAGACCCAGGACCTCATCGACAGCAAGCTGGACAAGAGGCGAAAGGGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GCTCCAGGACGCTCTGCCCCTTGCGCATGCGCGGTGTaGTCAAAGCCCACTGCTTTATCTTGCTCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: APGRSAPCACAV*SKPTALSCSSS
Trigger: AGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCACACCGCGCATGCGCAAGGGGCAGAGCGTCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGTACAGCATCGCCAGCTGCTGGCAGTCCTTCAGCTaGTTCTTGACCCGCCGCACCTCGTTGGCAATCTCG +
Preference number: 6 (lower is better)
Translates to: LYSIASCWQSFS*FLTRRTSLAIS
Trigger: CGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGCCAGAGCCTGTGGGCCCAACAAGCATGAGGCCGTaGCGTACCACTGTGGTCTCATACAGCTGGATGCAC +
Preference number: 6 (lower is better)
Translates to: LPEPVGPTSMRP*RTTVVSYSWMH
Trigger: GTGCATCCAGCTGTATGAGACCACAGTGGTACGGCACGGCCTCATGCTTGTTGGGCCCACAGGCTCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GTGAACACACGTGGATCCTCAGCACAGAAGAGGAGCTaGATCCTCGGGACCCAGTACTGGGTGGCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: VNTRGSSAQKRS*ILGTQYWVARS
Trigger: ACTCCTGGCCACCCAGTACTGGGTCCCGAGGATCCAGCTCCTCTTCTGTGCTGAGGATCCACGTGTGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAGTGCCGGTTCCGCATACCAGGGTTGCGCAGGCCTTaGATCAGCGGGATGTACGGCTTGAACTCCTCTATG +
Preference number: 6 (lower is better)
Translates to: QCRFRIPGLRRP*ISGMYGLNSSM
Trigger: CATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CTACCTCCATTGTCCAGTATGTCTGGCAGCCAGCGATaGTCACCTGGCCCGGCCAGTTCAGAACCCACTCAG +
Preference number: 6 (lower is better)
Translates to: LPPLSSMSGSQR*SPGPASSEPTQ
Trigger: CTGAGTGGGTTCTGAACTGGCCGGGCCAGGTGACCATCGCTGGCTGCCAGACATACTGGACAATGGAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CATGATGCACACAGCTTCAATGACCAGCTTCACTCCTaGGGGTGGGCGCTGCATGGCACGCACCTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: HDAHSFNDQLHS*GWALHGTHLCH
Trigger: GTGACAGAGGTGCGTGCCATGCAGCGCCCACCCCCAGGAGTGAAGCTGGTCATTGAAGCTGTGTGCATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AAGGAAGCGGCCTGGGTCTTGCAGCAACCCCTTGCCTaGCTCCCAGTAGTCATCCACTTTGGAGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: KEAAWVLQQPLA*LPVVIHFGAWL
Trigger: AAGCCAGGCTCCAAAGTGGATGACTACTGGGAGCCAGGCAAGGGGTTGCTGCAAGACCCAGGCCGCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CTTCTCGCAAGGCTTGCCGTTTGGGCTCCACCGCCTTaGCTACAAAATGGTACTTGTGCATGGCGCGCACCC +
Preference number: 6 (lower is better)
Translates to: LLARLAVWAPPP*LQNGTCAWRAP
Trigger: GGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CGCATGCGCGGTGTGCTCAAAGCCCACTGCTTTATCTaGCTCAAGCTCTGCTCATTGATGACCCGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: RMRGVLKAHCFI*LKLCSLMTRRP
Trigger: GGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCACACCGCGCATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CCAGTGCCGGTTCCGCATACCAGGGTTGCGCAGGCCTaGGATCAGCGGGATGTACGGCTTGAACTCCTCTAT +
Preference number: 6 (lower is better)
Translates to: PVPVPHTRVAQA*DQRDVRLELLY
Trigger: ATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCGCTGAGGCCCTTCTGTACCAGGTCCAGCAACTTGTaGCAGTCCCTCAGGCTGTCCAGCAGCCTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SLRPFCTRSSNL*QSLRLSSSLWS
Trigger: TGACCAGAGGCTGCTGGACAGCCTGAGGGACTGCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TACTCGCTGAGGCCCTTCTGTACCAGGTCCAGCAACTaGTTGCAGTCCCTCAGGCTGTCCAGCAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: YSLRPFCTRSSN*LQSLRLSSSLW
Trigger: CCAGAGGCTGCTGGACAGCCTGAGGGACTGCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GGGCGCTGCATGGCACGCACCTCTGTCACATCATTCTaGTTGAGGTTTCGAAGGCTGGCCAGGGCTGCATCC +
Preference number: 6 (lower is better)
Translates to: GRCMARTSVTSF*LRFRRLARAAS
Trigger: GGATGCAGCCCTGGCCAGCCTTCGAAACCTCAACAAGAATGATGTGACAGAGGTGCGTGCCATGCAGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GCTTCTCGCAAGGCTTGCCGTTTGGGCTCCACCGCCTaGGCTACAAAATGGTACTTGTGCATGGCGCGCACC +
Preference number: 6 (lower is better)
Translates to: ASRKACRLGSTA*ATKWYLCMART
Trigger: GGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTCTCCTGCCAGCGAACCTTTTCGTCGGCTAGCCCGTaGATGAGCTTGTCAGCTCTGCCCAGGCGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: VSCQRTFSSASP*MSLSALPRRCS
Trigger: TGAACAGCGCCTGGGCAGAGCTGACAAGCTCATCAACGGGCTAGCCGACGAAAAGGTTCGCTGGCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ACTTCTCTGGCCAGGCAGCTAAGATGCTCCAGGACGCTCTGCCCCTaGCGCATGCGCGGTGTGCTCAAAGCCCACTGCTTTATCTTGCTC +
Preference number: 6 (lower is better)
Translates to: TSLARQLRCSRTLCP*RMRGVLKAHCFILL
Trigger: GAGCAAGATAAAGCAGTGGGCTTTGAGCACACCGCGCATGCGCAAGGGGCAGAGCGTCCTGGAGCATCTTAGCTGCCTGGCCAGAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTCTCCAGGTACTCGCTGAGGCCCTTCTGTACCAGGTCCAGCAACTaGTTGCAGTCCCTCAGGCTGTCCAGCAGCCTCTGGTCAGAACAC +
Preference number: 6 (lower is better)
Translates to: VSRYSLRPFCTRSSN*LQSLRLSSSLWSEH
Trigger: GTGTTCTGACCAGAGGCTGCTGGACAGCCTGAGGGACTGCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGAGTACCTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATCCAGACGGCATCCACCGGCCCGTCGAACATGTACCATTTCTTGTaGGTGTCAGATGCGATGGCCCCGGCCCGGATGAGGGAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: IQTASTGPSNMYHFL*VSDAMAPARMREEK
Trigger: TTTCTCCTCCCTCATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGGCCGGTGGATGCCGTCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGCTGCTGGCAGTCCTTCAGCTGCTTCTTGACCCGCCGCACCTCGTaGGCAATCTCGTGTGCTCGTGCAATCTCCACATGGATGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SCWQSFSCFLTRRTS*AISCARAISTWMEK
Trigger: CTTCTCCATCCATGTGGAGATTGCACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TTGTTGTACAGCATCGCCAGCTGCTGGCAGTCCTTCAGCTGCTTCTaGACCCGCCGCACCTCGTTGGCAATCTCGTGTGCTCGTGCAATC +
Preference number: 6 (lower is better)
Translates to: LLYSIASCWQSFSCF*TRRTSLAISCARAI
Trigger: GATTGCACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CGCATACCAGGGTTGCGCAGGCCTTGGATCAGCGGGATGTACGGCTaGAACTCCTCTATGCGTGTTCGGATATCCAAAGCCACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RIPGLRRPWISGMYG*NSSMRVRISKATSW
Trigger: CCAGGAGGTGGCTTTGGATATCCGAACACGCATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATCTCATTGGACAGTACCTCCCAGTGCCGGTTCCGCATACCAGGGTaGCGCAGGCCTTGGATCAGCGGGATGTACGGCTTGAACTCCTCT +
Preference number: 6 (lower is better)
Translates to: ISLDSTSQCRFRIPG*RRPWISGMYGLNSS
Trigger: AGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCCAGGTACTCGCTGAGGCCCTTCTGTACCAGGTCCAGCAACTTGTaGCAGTCCCTCAGGCTGTCCAGCAGCCTCTGGTCAGAACACACA +
Preference number: 6 (lower is better)
Translates to: SRYSLRPFCTRSSNL*QSLRLSSSLWSEHT
Trigger: TGTGTGTTCTGACCAGAGGCTGCTGGACAGCCTGAGGGACTGCAACAAGTTGCTGGACCTGGTACAGAAGGGCCTCAGCGAGTACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CCCGGGGGACCCATGGCACAGACAAAGTTGATATCCACCAGGTTCTaGAAGGCTCCGATGACCTTTCGGTCATACCAGCCACCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PGGPMAQTKLISTRF*KAPMTFRSYQPPWS
Trigger: GGACCACGGTGGCTGGTATGACCGAAAGGTCATCGGAGCCTTCAAGAACCTGGTGGATATCAACTTTGTCTGTGCCATGGGTCCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GCTTCTTCCAGCAGGGGGCGCATAATCTCCAGCTCCTCCTGCATCTaGGCCACATCCTCAGAAGTGCGCAACAGCTTGTCAAGGCCACTC +
Preference number: 6 (lower is better)
Translates to: ASSSRGRIISSSSCI*ATSSEVRNSLSRPL
Trigger: GAGTGGCCTTGACAAGCTGTTGCGCACTTCTGAGGATGTGGCCAAGATGCAGGAGGAGCTGGAGATTATGCGCCCCCTGCTGGAAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCTGCATGGCACGCACCTCTGTCACATCATTCTTGTTaGGGTTTCGAAGGCTGGCCAGGGCTGCATCCAGGG +
Preference number: 6 (lower is better)
Translates to: AAWHAPLSHHSC*GFEGWPGLHPG
Trigger: CCCTGGATGCAGCCCTGGCCAGCCTTCGAAACCTCAACAAGAATGATGTGACAGAGGTGCGTGCCATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGGTGCGGACAGCCACGGGTATGTACTCCATGCGTGTaGGGTCAATGTCCTTCTCTGTCTGCTCGGCAATCC +
Preference number: 6 (lower is better)
Translates to: GCGQPRVCTPCV*GQCPSLSARQS
Trigger: GGATTGCCGAGCAGACAGAGAAGGACATTGACCTCACACGCATGGAGTACATACCCGTGGCTGTCCGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GTGCTCAAAGCCCACTGCTTTATCTTGCTCAAGCTCTaGTCATTGATGACCCGCCGGCCCTCGGTGGGCATG +
Preference number: 6 (lower is better)
Translates to: VLKAHCFILLKL*SLMTRRPSVGM
Trigger: CATGCCCACCGAGGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCACCAATGAACTGTGTGAAGCTGCCCAGGGAGTCCTaGACCAGGAAGCGCAGCGTGTCCTGCAGCATGTAC +
Preference number: 6 (lower is better)
Translates to: SPMNCVKLPRES*TRKRSVSCSMY
Trigger: GTACATGCTGCAGGACACGCTGCGCTTCCTGGTGCAGGACTCCCTGGGCAGCTTCACACAGTTCATTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTTCTTGACCCGCCGCACCTCGTTGGCAATCTCGTGTaGTCGTGCAATCTCCACATGGATGGAGAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLDPPHLVGNLV*SCNLHMDGEAS
Trigger: GCTGGCTTCTCCATCCATGTGGAGATTGCACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCTGAAAGAAGACCCACTTGCCCCTCTCTATGGAGTTaGGCATCATGGCTTCTGCCCGAGGGCCCTGACCCT +
Preference number: 6 (lower is better)
Translates to: SERRPTCPSLWS*ASWLLPEGPDP
Trigger: AGGGTCAGGGCCCTCGGGCAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAGTGGGTCTTCTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTTGTaGGTGCTGCAGGTCTGGATGTCTGGGCATGAGCTT +
Preference number: 6 (lower is better)
Translates to: GEEWITALFDGL*VLQVWMSGHEL
Trigger: AAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ATTGTCCAGTATGTCTGGCAGCCAGCGATGGTCACCTaGCCCGGCCAGTTCAGAACCCACTCAGTTCTGAGC +
Preference number: 6 (lower is better)
Translates to: IVQYVWQPAMVT*PGQFRTHSVLS
Trigger: GCTCAGAACTGAGTGGGTTCTGAACTGGCCGGGCCAGGTGACCATCGCTGGCTGCCAGACATACTGGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ACCAGGGCCACCAGGTCACTGAGCTGTTTGGAGAGCTaGGGGAACAGCTTGCTACTGATGTTGCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: TRATRSLSCLES*GNSLLLMLPAS
Trigger: TGAGGCTGGCAACATCAGTAGCAAGCTGTTCCCCCAGCTCTCCAAACAGCTCAGTGACCTGGTGGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CTCTTGTCCAGCTTGCTGTCGATGAGGTCCTGGGTCTaGTTGGCTGAAGTGCGGGCTGAGAAGGTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LLSSLLSMRSWV*LAEVRAEKVRK
Trigger: CTTCCTCACCTTCTCAGCCCGCACTTCAGCCAACCAGACCCAGGACCTCATCGACAGCAAGCTGGACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTTCGCCTCTTGTCCAGCTTGCTGTCGATGAGGTCCTaGGTCTGGTTGGCTGAAGTGCGGGCTGAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: FRLLSSLLSMRS*VWLAEVRAEKV
Trigger: CACCTTCTCAGCCCGCACTTCAGCCAACCAGACCCAGGACCTCATCGACAGCAAGCTGGACAAGAGGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTCACCAGGCGGTCACGGAACACACGGCAGTTCTCATaGTACCATAGCCGCAGCAGCTGCACCTTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: FTRRSRNTRQFS*YHSRSSCTLSS
Trigger: TGAGGACAAGGTGCAGCTGCTGCGGCTATGGTACCATGAGAACTGCCGTGTGTTCCGTGACCGCCTGGTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GCTTGCCGTTTGGGCTCCACCGCCTTGGCTACAAAATaGTACTTGTGCATGGCGCGCACCCACTGGCAGATA +
Preference number: 6 (lower is better)
Translates to: ACRLGSTALATK*YLCMARTHWQI
Trigger: TATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GGGTTGCCCTCGGAGGAACTGAGGCGGTACAGTATCTaGTCCTCAATGTCCTTCAGCTCCTGGCGCATCTTG +
Preference number: 6 (lower is better)
Translates to: GLPSEELRRYSI*SSMSFSSWRIL
Trigger: CAAGATGCGCCAGGAGCTGAAGGACATTGAGGACCAGATACTGTACCGCCTCAGTTCCTCCGAGGGCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTCTCAGCCACATCTTCTACCAACTCCTCCCGGCTCTaGCCGCCCATAGAAGAGGATTTGGGCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: FSATSSTNSSRL*PPIEEDLGCSW
Trigger: CCAGCTGCAGCCCAAATCCTCTTCTATGGGCGGCCAGAGCCGGGAGGAGTTGGTAGAAGATGTGGCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TGTGGGTGCTGCAGGTCTGGATGTCTGGGCATGAGCTaGTTAGAGTCGATGCCCTCGCTGGTCAACAGCTGC +
Preference number: 6 (lower is better)
Translates to: CGCCRSGCLGMS*LESMPSLVNSC
Trigger: GCAGCTGTTGACCAGCGAGGGCATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TACATCAACAGCGCCTCTGTGTACTTGCGCAGAGCGTaGGCCTGGACCACGCGCTGTGTGAACACACGTGGA +
Preference number: 6 (lower is better)
Translates to: YINSASVYLRRA*AWTTRCVNTRG
Trigger: TCCACGTGTGTTCACACAGCGCGTGGTCCAGGCCAACGCTCTGCGCAAGTACACAGAGGCGCTGTTGATGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CGCCGGCCCTCGGTGGGCATGCAATCCACATACAGGTaGTACATCAACAGCGCCTCTGTGTACTTGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RRPSVGMQSTYR*YINSASVYLRR
Trigger: TCTGCGCAAGTACACAGAGGCGCTGTTGATGTACAACCTGTATGTGGATTGCATGCCCACCGAGGGCCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CAGTCCTTCAGCTGCTTCTTGACCCGCCGCACCTCGTaGGCAATCTCGTGTGCTCGTGCAATCTCCACATGG +
Preference number: 6 (lower is better)
Translates to: QSFSCFLTRRTS*AISCARAISTW
Trigger: CCATGTGGAGATTGCACGAGCACACGAGATTGCCAACGAGGTGCGGCGGGTCAAGAAGCAGCTGAAGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CGCTGCATGGCACGCACCTCTGTCACATCATTCTTGTaGAGGTTTCGAAGGCTGGCCAGGGCTGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: RCMARTSVTSFL*RFRRLARAASR
Trigger: CCTGGATGCAGCCCTGGCCAGCCTTCGAAACCTCAACAAGAATGATGTGACAGAGGTGCGTGCCATGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TACAGGTTGTACATCAACAGCGCCTCTGTGTACTTGCGCAGAGCGTaGGCCTGGACCACGCGCTGTGTGAACACACGTGGATCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: YRLYINSASVYLRRA*AWTTRCVNTRGSSA
Trigger: TGCTGAGGATCCACGTGTGTTCACACAGCGCGTGGTCCAGGCCAACGCTCTGCGCAAGTACACAGAGGCGCTGTTGATGTACAACCTGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGTGTGCTCAAAGCCCACTGCTTTATCTTGCTCAAGCTCTGCTCATaGATGACCCGCCGGCCCTCGGTGGGCATGCAATCCACATACAGG +
Preference number: 6 (lower is better)
Translates to: GVLKAHCFILLKLCS*MTRRPSVGMQSTYR
Trigger: CCTGTATGTGGATTGCATGCCCACCGAGGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTTGAGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATCTCCAGGCAGCGGGCAAAGGTCAAGTTGGCCTTGGGCCTGACATaGATGTTGATCTCATTGGACAGTACCTCCCAGTGCCGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: ISRQRAKVKLALGLT*MLISLDSTSQCRFR
Trigger: GCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGCCCGCTGCCTGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CTCATAGGCGTTCTTCATGATCTTCCTCCAGATGCGCTCCATGGTTaGGTAGCGCTTGCTCTCCACAGGCAGCTGCCGGGTGATGTCCTC +
Preference number: 6 (lower is better)
Translates to: LIGVLHDLPPDALHG*VALALHRQLPGDVL
Trigger: GAGGACATCACCCGGCAGCTGCCTGTGGAGAGCAAGCGCTACCAAACCATGGAGCGCATCTGGAGGAAGATCATGAAGAACGCCTATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TACAGCTGGATGCACTTGATCAGGAAGCCCTCCACATCCTTGAGGTaGTTCTTCTCACAGGACCTGCGGATGGCCTGGTCCAGGATGCCG +
Preference number: 6 (lower is better)
Translates to: YSWMHLIRKPSTSLR*FFSQDLRMAWSRMP
Trigger: CGGCATCCTGGACCAGGCCATCCGCAGGTCCTGTGAGAAGAACAACCTCAAGGATGTGGAGGGCTTCCTGATCAAGTGCATCCAGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGGCTGTGTCCACCTTGATCTGTTCCATGGTGAGCATGGTGTCCTaGGCAGCTTCTTCCAGCAGGGGGCGCATAATCTCCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MAVSTLICSMVSMVS*AASSSRGRIISSSS
Trigger: GGAGGAGCTGGAGATTATGCGCCCCCTGCTGGAAGAAGCTGCCAAGGACACCATGCTCACCATGGAACAGATCAAGGTGGACACAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AAGGCTTGCCGTTTGGGCTCCACCGCCTTGGCTACAAAATGGTACTaGTGCATGGCGCGCACCCACTGGCAGATAGATGTGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: KACRLGSTALATKWY*CMARTHWQIDVQAL
Trigger: CAAAGCCTGCACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGGATCACTGTGTCTCCCAGCTTCAGGACTATGTTCCCTTGCTGCTaGTACGTCTGCTTAAGCAGCACAGGCTCCAGTGCCGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: GITVSPSFRTMFPCC*YVCLSSTGSSAGSS
Trigger: GCTGGATCCGGCACTGGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACACAGTGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TTCAGCTCCTGGCGCATCTTGGCATTACTGACAATCAGCTGGTTCTaGGCCTCTTCCAGGTCAGGTCGTTCCTCAGCCACTACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: FSSWRILALLTISWF*ASSRSGRSSATTWP
Trigger: GGGCCAGGTAGTGGCTGAGGAACGACCTGACCTGGAAGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGGAAGAAGAAGCCACTGATCCAGAAGACAGGCGGGATGCCATCGTaGATCCAGGAATGCATGAAGTCCAGGCGCAGCAGCAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: GKKKPLIQKTGGMPS*IQECMKSRRSSRSM
Trigger: CATGGACCTGCTGCTGCGCCTGGACTTCATGCATTCCTGGATCAACGATGGCATCCCGCCTGTCTTCTGGATCAGTGGCTTCTTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGCCTTCTCGTTGGCCTTAATCTCCTCTGCCTGCACTaGTTTCCGGGTCTCCTCAGCTATGGCTGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: GLLVGLNLLCLH*FPGLLSYGCVH
Trigger: GTGGACACAGCCATAGCTGAGGAGACCCGGAAATCAGTGCAGGCAGAGGAGATTAAGGCCAACGAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCGCTGCGAGAACTGATTGATGACCCCGTTCTCCACTaGCAGAGTGTCATTGGGGAGGCCAGCAATCTGCCA +
Preference number: 6 (lower is better)
Translates to: ALRELIDDPVLH*QSVIGEASNLP
Trigger: TGGCAGATTGCTGGCCTCCCCAATGACACTCTGTCAGTGGAGAACGGGGTCATCAATCAGTTCTCGCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CACCACATCCTTGGCGTGGACCTCAATGACAATGAGTaGCGAAAGCACCATCCGCTGCATGCGGGACAGCTT +
Preference number: 6 (lower is better)
Translates to: HHILGVDLNDNE*RKHHPLHAGQL
Trigger: AAGCTGTCCCGCATGCAGCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGGGCTCCACCGCCTTGGCTACAAAATGGTACTTGTaGATGGCGCGCACCCACTGGCAGATAGATGTGCAG +
Preference number: 6 (lower is better)
Translates to: LGSTALATKWYL*MARTHWQIDVQ
Trigger: CTGCACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGGCCTGCATTGTGGCGATGCCATCTTCCACTTCGTaGAGGTGGTGCTTCGCCTCTTCTAGTATCCGCTGG +
Preference number: 6 (lower is better)
Translates to: LACIVAMPSSTS*RWCFASSSIRW
Trigger: CCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CCACACACTCTCGATACTTGGCCTGCATTGTGGCGATaGCATCTTCCACTTCGTGCAGGTGGTGCTTCGCCT +
Preference number: 6 (lower is better)
Translates to: PHTLDTWPALWR*HLPLRAGGASP
Trigger: AGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTATCGAGAGTGTGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATGAGCTTGTCAGCTCTGCCCAGGCGCTGTTCACACTaGTCACACTTCATCTCCAGCTCCTCCTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MSLSALPRRCSH*SHFISSSSFLA
Trigger: GGCCAAGAAGGAGGAGCTGGAGATGAAGTGTGAGCAGTGTGAACAGCGCCTGGGCAGAGCTGACAAGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GCAGTTTCTGGAACTCGTCCAGGTATGCGTTCCAGATaGCAGGCAAGAGCTCCCTGTGAGGCTCAGCACTGT +
Preference number: 6 (lower is better)
Translates to: AVSGTRPGMRSR*QARAPCEAQHC
Trigger: ACAGTGCTGAGCCTCACAGGGAGCTCTTGCCTGGCATCTGGAACGCATACCTGGACGAGTTCCAGAAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CAGAAGACAGGCGGGATGCCATCGTTGATCCAGGAATaGATGAAGTCCAGGCGCAGCAGCAGGTCCATGATC +
Preference number: 6 (lower is better)
Translates to: QKTGGMPSLIQE*MKSRRSSRSMI
Trigger: GATCATGGACCTGCTGCTGCGCCTGGACTTCATGCATTCCTGGATCAACGATGGCATCCCGCCTGTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ACGGCCCTGTTCGATGGTTTGTGGGTGCTGCAGGTCTaGATGTCTGGGCATGAGCTTGTTAGAGTCGATGCC +
Preference number: 6 (lower is better)
Translates to: TALFDGLWVLQV*MSGHELVRVDA
Trigger: GGCATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCCTCCATCACCAGCTTCTCCAGTTGGGGCACAGCATaGGTGGCCAGGATACCCTTGTCAAAGAGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSITSFSSWGTA*VARIPLSKRLS
Trigger: GCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGTGCCCCAACTGGAGAAGCTGGTGATGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCCAGCTCTCAGACCACCGCAGCCAGTCTGAGGCTGTaGTCCAGAGGTCCAGGTATGGTTGGAATTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SSSQTTAASLRL*SRGPGMVGIPS
Trigger: TGAAGGAATTCCAACCATACCTGGACCTCTGGACCACAGCCTCAGACTGGCTGCGGTGGTCTGAGAGCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CCAGCAGCCAGTCCTCCACATTGCTTGAGGGGTAGATaGAGAAGGAGAGCTTTACCTCTTCCCCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: PAASPPHCLRGR*RRRALPLPPLL
Trigger: CAGCAGAGGGGGAAGAGGTAAAGCTCTCCTTCTCCATCTACCCCTCAAGCAATGTGGAGGACTGGCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCGGTATACAGCTCTTTGGGCCGTGACTCAGCCAGCTaGAAATTCATGGAGTCCCAGCGAGCACCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVYSSLGRDSAS*KFMESQRAPSR
Trigger: CCTGGAAGGTGCTCGCTGGGACTCCATGAATTTCCAGCTGGCTGAGTCACGGCCCAAAGAGCTGTATACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TATGGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTaGTGGGTGCTGCAGGTCTGGATGTCTGGGCATGAG +
Preference number: 6 (lower is better)
Translates to: YGEEWITALFDG*WVLQVWMSGHE
Trigger: CTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACATACAGGTTGTACATCAACAGCGCCTCTGTGTACTaGCGCAGAGCGTTGGCCTGGACCACGCGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: TYRLYINSASVY*RRALAWTTRCV
Trigger: CACACAGCGCGTGGTCCAGGCCAACGCTCTGCGCAAGTACACAGAGGCGCTGTTGATGTACAACCTGTATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAAGCCCACTGCTTTATCTTGCTCAAGCTCTGCTCATaGATGACCCGCCGGCCCTCGGTGGGCATGCAATCC +
Preference number: 6 (lower is better)
Translates to: KAHCFILLKLCS*MTRRPSVGMQS
Trigger: GGATTGCATGCCCACCGAGGGCCGGCGGGTCATCAATGAGCAGAGCTTGAGCAAGATAAAGCAGTGGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GAGAGGCTTGAGTGGAACAGGGACATGGAGGTCACCTaGTTGCATTCAGCCCGCACCTTGCTCAGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ERLEWNRDMEVT*LHSARTLLRAV
Trigger: CACAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTGGTGATAGGCAAGCCAAAGATGCGCTCGCGGTTGTaGTACAGCATCGCCAGCTGCTGGCAGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LVIGKPKMRSRL*YSIASCWQSFS
Trigger: GCTGAAGGACTGCCAGCAGCTGGCGATGCTGTACAACAACCGCGAGCGCATCTTTGGCTTGCCTATCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GGGTTGCGCAGGCCTTGGATCAGCGGGATGTACGGCTaGAACTCCTCTATGCGTGTTCGGATATCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: GLRRPWISGMYG*NSSMRVRISKA
Trigger: GGCTTTGGATATCCGAACACGCATAGAGGAGTTCAAGCCGTACATCCCGCTGATCCAAGGCCTGCGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTTCTTCATGATCTTCCTCCAGATGCGCTCCATGGTTaGGTAGCGCTTGCTCTCCACAGGCAGCTGCCGGGT +
Preference number: 6 (lower is better)
Translates to: VLHDLPPDALHG*VALALHRQLPG
Trigger: ACCCGGCAGCTGCCTGTGGAGAGCAAGCGCTACCAAACCATGGAGCGCATCTGGAGGAAGATCATGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGCAGGGGGCGCATAATCTCCAGCTCCTCCTGCATCTaGGCCACATCCTCAGAAGTGCGCAACAGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SRGRIISSSSCI*ATSSEVRNSLS
Trigger: TGACAAGCTGTTGCGCACTTCTGAGGATGTGGCCAAGATGCAGGAGGAGCTGGAGATTATGCGCCCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CGTTTGGGCTCCACCGCCTTGGCTACAAAATGGTACTaGTGCATGGCGCGCACCCACTGGCAGATAGATGTG +
Preference number: 6 (lower is better)
Translates to: RLGSTALATKWY*CMARTHWQIDV
Trigger: CACATCTATCTGCCAGTGGGTGCGCGCCATGCACAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCCAGGTCATCCTGGGCTTCTCGCAAGGCTTGCCGTTaGGGCTCCACCGCCTTGGCTACAAAATGGTACTTG +
Preference number: 6 (lower is better)
Translates to: SRSSWASRKACR*GSTALATKWYL
Trigger: CAAGTACCATTTTGTAGCCAAGGCGGTGGAGCCCAAACGGCAAGCCTTGCGAGAAGCCCAGGATGACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAGCCACTGATCCAGAAGACAGGCGGGATGCCATCGTaGATCCAGGAATGCATGAAGTCCAGGCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: KPLIQKTGGMPS*IQECMKSRRSS
Trigger: GCTGCTGCGCCTGGACTTCATGCATTCCTGGATCAACGATGGCATCCCGCCTGTCTTCTGGATCAGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCGATGGTTTGTGGGTGCTGCAGGTCTGGATGTCTGGGCATGAGCTaGTTAGAGTCGATGCCCTCGCTGGTCAACAGCTGCTCAATGTCC +
Preference number: 6 (lower is better)
Translates to: SMVCGCCRSGCLGMS*LESMPSLVNSCSMS
Trigger: GGACATTGAGCAGCTGTTGACCAGCGAGGGCATCGACTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CGCAGCTTTGACATGAGGTACACCTCCCAGTTGGTCTCATACAGGTaGTACCAGCCCTTGCTCATGTCTCGAAGGCTGCCGCGCATAGCT +
Preference number: 6 (lower is better)
Translates to: RSFDMRYTSQLVSYR*YQPLLMSRRLPRIA
Trigger: AGCTATGCGCGGCAGCCTTCGAGACATGAGCAAGGGCTGGTACAACCTGTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GCAAAGGTCAAGTTGGCCTTGGGCCTGACATTGATGTTGATCTCATaGGACAGTACCTCCCAGTGCCGGTTCCGCATACCAGGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: AKVKLALGLTLMLIS*DSTSQCRFRIPGLR
Trigger: GCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGGCAGCGGGCAAAGGTCAAGTTGGCCTTGGGCCTGACATTGATGTaGATCTCATTGGACAGTACCTCCCAGTGCCGGTTCCGCATACCA +
Preference number: 6 (lower is better)
Translates to: RQRAKVKLALGLTLM*ISLDSTSQCRFRIP
Trigger: TGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGCCCGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTCTCATACAGCTGGATGCACTTGATCAGGAAGCCCTCCACATCCTaGAGGTTGTTCTTCTCACAGGACCTGCGGATGGCCTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VSYSWMHLIRKPSTS*RLFFSQDLRMAWSR
Trigger: CCTGGACCAGGCCATCCGCAGGTCCTGTGAGAAGAACAACCTCAAGGATGTGGAGGGCTTCCTGATCAAGTGCATCCAGCTGTATGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTGTCTGAGAACAGGAAGGTGATGGGCAGGTTCTGCAGGCCAGCCTaGAGCAGAACCTTCTTGACATCTTCACGCCACTCAGACATGCCG +
Preference number: 6 (lower is better)
Translates to: VSENRKVMGRFCRPA*SRTFLTSSRHSDMP
Trigger: CGGCATGTCTGAGTGGCGTGAAGATGTCAAGAAGGTTCTGCTCAAGGCTGGCCTGCAGAACCTGCCCATCACCTTCCTGTTCTCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGGCGCGCACCCACTGGCAGATAGATGTGCAGGCTTTGGACACCTaGGCAATGGCAGCTGGCTGGAACTCCTCATTGTCGATATATGGC +
Preference number: 6 (lower is better)
Translates to: MARTHWQIDVQALDT*AMAAGWNSSLSIYG
Trigger: GCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTGCACATCTATCTGCCAGTGGGTGCGCGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CACTTCATCTCCAGCTCCTCCTTCTTGGCCACACACTCTCGATACTaGGCCTGCATTGTGGCGATGCCATCTTCCACTTCGTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: HFISSSSFLATHSRY*ACIVAMPSSTSCRW
Trigger: CCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTATCGAGAGTGTGTGGCCAAGAAGGAGGAGCTGGAGATGAAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGGCGCTGTTCACACTGCTCACACTTCATCTCCAGCTCCTCCTTCTaGGCCACACACTCTCGATACTTGGCCTGCATTGTGGCGATGCCA +
Preference number: 6 (lower is better)
Translates to: RRCSHCSHFISSSSF*ATHSRYLACIVAMP
Trigger: TGGCATCGCCACAATGCAGGCCAAGTATCGAGAGTGTGTGGCCAAGAAGGAGGAGCTGGAGATGAAGTGTGAGCAGTGTGAACAGCGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TTGGAAGCCTCGAGCACCTTGATGAGCTCCATGTCATCGACAGGGTaGCCCTCGGAGGAACTGAGGCGGTACAGTATCTGGTCCTCAATG +
Preference number: 6 (lower is better)
Translates to: LEASSTLMSSMSSTG*PSEELRRYSIWSSM
Trigger: CATTGAGGACCAGATACTGTACCGCCTCAGTTCCTCCGAGGGCAACCCTGTCGATGACATGGAGCTCATCAAGGTGCTCGAGGCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGGTCAGTACCAGGTGACAGCACGAAGATGAGGGGCGTTGTGGAGTaGGACTCTTTGAACACTGCAGACAGATTGGCTGTCTGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: GSVPGDSTKMRGVVE*DSLNTADRLAVWGS
Trigger: TGAGCCCCAGACAGCCAATCTGTCTGCAGTGTTCAAAGAGTCCAACTCCACAACGCCCCTCATCTTCGTGCTGTCACCTGGTACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp ATCATTCATCCAGCTCTCAGACCACCGCAGCCAGTCTaGGGCTGTGGTCCAGAGGTCCAGGTATGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: IIHPALRPPQPV*GCGPEVQVWLE
Trigger: TTCCAACCATACCTGGACCTCTGGACCACAGCCTCAGACTGGCTGCGGTGGTCTGAGAGCTGGATGAATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp AATTACTCTTGCCAGAGCCTGTGGGCCCAACAAGCATaGGGCCGTGCCGTACCACTGTGGTCTCATACAGCT +
Preference number: 6 (lower is better)
Translates to: NYSCQSLWAQQA*GRAVPLWSHTA
Trigger: AGCTGTATGAGACCACAGTGGTACGGCACGGCCTCATGCTTGTTGGGCCCACAGGCTCTGGCAAGAGTAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TGGGGGTCAATGAAGTGGGTCCAGCGCTGCGAGAACTaGTTGATGACCCCGTTCTCCACTGACAGAGTGTCA +
Preference number: 6 (lower is better)
Translates to: WGSMKWVQRCEN*LMTPFSTDRVS
Trigger: TGACACTCTGTCAGTGGAGAACGGGGTCATCAATCAGTTCTCGCAGCGCTGGACCCACTTCATTGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCTCCATGTCATCGACAGGGTTGCCCTCGGAGGAACTaGGGCGGTACAGTATCTGGTCCTCAATGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: APCHRQGCPRRN*GGTVSGPQCPS
Trigger: TGAAGGACATTGAGGACCAGATACTGTACCGCCTCAGTTCCTCCGAGGGCAACCCTGTCGATGACATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CAGATGAGAGCTACACCACGCTTTATCCAGTGTCGCTaGGGCTGGTTGCTGGGGATCTCCACAGCAATGACG +
Preference number: 6 (lower is better)
Translates to: QMRATPRFIQCR*GWLLGISTAMT
Trigger: CGTCATTGCTGTGGAGATCCCCAGCAACCAGCCTCAGCGACACTGGATAAAGCGTGGTGTAGCTCTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp AGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTGCTaGAGGTCTGGATGTCTGGGCATGAGCTTGTTAGAG +
Preference number: 6 (lower is better)
Translates to: SGSRPCSMVCGC*RSGCLGMSLLE
Trigger: CTCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ACATTGATGTTGATCTCATTGGACAGTACCTCCCAGTaGCGGTTCCGCATACCAGGGTTGCGCAGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: TLMLISLDSTSQ*RFRIPGLRRPW
Trigger: CCAAGGCCTGCGCAACCCTGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CCCGTCGAACATGTACCATTTCTTGTTGGTGTCAGATaGGATGGCCCCGGCCCGGATGAGGGAGGAGAAAAT +
Preference number: 6 (lower is better)
Translates to: PVEHVPFLVGVR*DGPGPDEGGEN
Trigger: ATTTTCTCCTCCCTCATCCGGGCCGGGGCCATCGCATCTGACACCAACAAGAAATGGTACATGTTCGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATTGTGGCGATGCCATCTTCCACTTCGTGCAGGTGGTaGTTCGCCTCTTCTAGTATCCGCTGGGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: IVAMPSSTSCRW*FASSSIRWVTS
Trigger: GGAAGTGACCCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCCACTGACAGAGTGTCATTGGGGAGGCCAGCAATCTaGCAAGAGCGGATCTTCACGGGGTTTCCCAGTGTT +
Preference number: 6 (lower is better)
Translates to: STDRVSLGRPAI*QERIFTGFPSV
Trigger: AACACTGGGAAACCCCGTGAAGATCCGCTCTTGGCAGATTGCTGGCCTCCCCAATGACACTCTGTCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp AGCTTCAGGACTATGTTCCCTTGCTGCTTGTACGTCTaGTTAAGCAGCACAGGCTCCAGTGCCGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: SFRTMFPCCLYV*LSSTGSSAGSS
Trigger: GCTGGATCCGGCACTGGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATGAAGCGGGGTTCCAGGTGGGTGGCCACAAAGTCCTaGATGGCATTAGTGACTTTATCCCCACGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: MKRGSRWVATKS*MALVTLSPRRQ
Trigger: TTGCCTGCGTGGGGATAAAGTCACTAATGCCATGCAGGACTTTGTGGCCACCCACCTGGAACCCCGCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ATGAGGCCGTGCCGTACCACTGTGGTCTCATACAGCTaGATGCACTTGATCAGGAAGCCCTCCACATCCTTG +
Preference number: 6 (lower is better)
Translates to: MRPCRTTVVSYS*MHLIRKPSTSL
Trigger: CAAGGATGTGGAGGGCTTCCTGATCAAGTGCATCCAGCTGTATGAGACCACAGTGGTACGGCACGGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TGCATTGTGGCGATGCCATCTTCCACTTCGTGCAGGTaGTGCTTCGCCTCTTCTAGTATCCGCTGGGTCACT +
Preference number: 6 (lower is better)
Translates to: CIVAMPSSTSCR*CFASSSIRWVT
Trigger: AGTGACCCAGCGGATACTAGAAGAGGCGAAGCACCACCTGCACGAAGTGGAAGATGGCATCGCCACAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CCAGCTCCTCCTTCTTGGCCACACACTCTCGATACTTaGCCTGCATTGTGGCGATGCCATCTTCCACTTCGT +
Preference number: 6 (lower is better)
Translates to: PAPPSWPHTLDT*PALWRCHLPLR
Trigger: ACGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTATCGAGAGTGTGTGGCCAAGAAGGAGGAGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GGTCTGATAGCCACTGTGGTGCAGGGTTCTCAAACATaGTCTGGATGGAGCCTCCAGACAAGAGATAGCGCC +
Preference number: 6 (lower is better)
Translates to: GLIATVVQGSQT*SGWSLQTRDSA
Trigger: GGCGCTATCTCTTGTCTGGAGGCTCCATCCAGACCATGTTTGAGAACCCTGCACCACAGTGGCTATCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GGCTTCCTGTTTTGTGAGCCTGGCTCCAAGCCCATGTaGAGCCACTCTGTGGGAGTCCGGCAATCAAACTCT +
Preference number: 6 (lower is better)
Translates to: GFLFCEPGSKPM*SHSVGVRQSNS
Trigger: AGAGTTTGATTGCCGGACTCCCACAGAGTGGCTCAACATGGGCTTGGAGCCAGGCTCACAAAACAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGGCTTGAGTGGAACAGGGACATGGAGGTCACCTTGTaGCATTCAGCCCGCACCTTGCTCAGAGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: RLEWNRDMEVTL*HSARTLLRAVM
Trigger: CATCACAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GACTGGATCTGCTCAAATTCCTCCAGGCGGCTGTACTaGGAGAGGCTTGAGTGGAACAGGGACATGGAGGTC +
Preference number: 6 (lower is better)
Translates to: DWICSNSSRRLY*ERLEWNRDMEV
Trigger: GACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGGAATTTGAGCAGATCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACCTCCCAGTTGGTCTCATACAGGTTGTACCAGCCCTaGCTCATGTCTCGAAGGCTGCCGCGCATAGCTACT +
Preference number: 6 (lower is better)
Translates to: TSQLVSYRLYQP*LMSRRLPRIAT
Trigger: AGTAGCTATGCGCGGCAGCCTTCGAGACATGAGCAAGGGCTGGTACAACCTGTATGAGACCAACTGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATGCACTTGATCAGGAAGCCCTCCACATCCTTGAGGTaGTTCTTCTCACAGGACCTGCGGATGGCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: MHLIRKPSTSLR*FFSQDLRMAWS
Trigger: GGACCAGGCCATCCGCAGGTCCTGTGAGAAGAACAACCTCAAGGATGTGGAGGGCTTCCTGATCAAGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGCTGGATGCACTTGATCAGGAAGCCCTCCACATCCTaGAGGTTGTTCTTCTCACAGGACCTGCGGATGGCC +
Preference number: 6 (lower is better)
Translates to: SWMHLIRKPSTS*RLFFSQDLRMA
Trigger: GGCCATCCGCAGGTCCTGTGAGAAGAACAACCTCAAGGATGTGGAGGGCTTCCTGATCAAGTGCATCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAACTTGAAGAGGCTTTCAAGGAAGCGGCCTGGGTCTaGCAGCAACCCCTTGCCTGGCTCCCAGTAGTCATC +
Preference number: 6 (lower is better)
Translates to: KLEEAFKEAAWV*QQPLAWLPVVI
Trigger: GATGACTACTGGGAGCCAGGCAAGGGGTTGCTGCAAGACCCAGGCCGCTTCCTTGAAAGCCTCTTCAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCCAGCTCCTCCTTCTTGGCCACACACTCTCGATACTaGGCCTGCATTGTGGCGATGCCATCTTCCACTTCG +
Preference number: 6 (lower is better)
Translates to: SSSSFLATHSRY*ACIVAMPSSTS
Trigger: CGAAGTGGAAGATGGCATCGCCACAATGCAGGCCAAGTATCGAGAGTGTGTGGCCAAGAAGGAGGAGCTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTGTCTCCCAGCTTCAGGACTATGTTCCCTTGCTGCTaGTACGTCTGCTTAAGCAGCACAGGCTCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: VSPSFRTMFPCC*YVCLSSTGSSA
Trigger: GGCACTGGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CCAGGGACGGGCTTCCTGTTTTGTGAGCCTGGCTCCAAGCCCATGTaGAGCCACTCTGTGGGAGTCCGGCAATCAAACTCTTCATTATCA +
Preference number: 6 (lower is better)
Translates to: PGTGFLFCEPGSKPM*SHSVGVRQSNSSLS
Trigger: TGATAATGAAGAGTTTGATTGCCGGACTCCCACAGAGTGGCTCAACATGGGCTTGGAGCCAGGCTCACAAAACAGGAAGCCCGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGCAATCCACATACAGGTTGTACATCAACAGCGCCTCTGTGTACTaGCGCAGAGCGTTGGCCTGGACCACGCGCTGTGTGAACACACGT +
Preference number: 6 (lower is better)
Translates to: MQSTYRLYINSASVY*RRALAWTTRCVNTR
Trigger: ACGTGTGTTCACACAGCGCGTGGTCCAGGCCAACGCTCTGCGCAAGTACACAGAGGCGCTGTTGATGTACAACCTGTATGTGGATTGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ACTGGATCTGCTCAAATTCCTCCAGGCGGCTGTACTTGGAGAGGCTaGAGTGGAACAGGGACATGGAGGTCACCTTGTTGCATTCAGCCC +
Preference number: 6 (lower is better)
Translates to: TGSAQIPPGGCTWRG*SGTGTWRSPCCIQP
Trigger: GGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGGAATTTGAGCAGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ACCAGCTTCTCCAGTTGGGGCACAGCATGGGTGGCCAGGATACCCTaGTCAAAGAGGTTGAGCAGAATCATCTCGAAGTGCTCTAGAGGC +
Preference number: 6 (lower is better)
Translates to: TSFSSWGTAWVARIP*SKRLSRIISKCSRG
Trigger: GCCTCTAGAGCACTTCGAGATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGTGCCCCAACTGGAGAAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTCCTTGTCAAACTTGAAGAGGCTTTCAAGGAAGCGGCCTGGGTCTaGCAGCAACCCCTTGCCTGGCTCCCAGTAGTCATCCACTTTGGA +
Preference number: 6 (lower is better)
Translates to: VLVKLEEAFKEAAWV*QQPLAWLPVVIHFG
Trigger: TCCAAAGTGGATGACTACTGGGAGCCAGGCAAGGGGTTGCTGCAAGACCCAGGCCGCTTCCTTGAAAGCCTCTTCAAGTTTGACAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGTGCCGGATCCAGCTCCTCACCCACATTTTCTAGAAGGCATGGCTaGCCAAAGCGGATAGCATTTTCCATGCTGCGCAGGAAGTCACGG +
Preference number: 6 (lower is better)
Translates to: SAGSSSSPTFSRRHG*PKRIAFSMLRRKSR
Trigger: CCGTGACTTCCTGCGCAGCATGGAAAATGCTATCCGCTTTGGCAAGCCATGCCTTCTAGAAAATGTGGGTGAGGAGCTGGATCCGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGGTAAGGGATCACTGTGTCTCCCAGCTTCAGGACTATGTTCCCTaGCTGCTTGTACGTCTGCTTAAGCAGCACAGGCTCCAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: MVRDHCVSQLQDYVP*LLVRLLKQHRLQCR
Trigger: CCGGCACTGGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACACAGTGATCCCTTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GCTTCTGGCAAGAGCCAGATAACAGCCATCTCGGTATACAGCTCTTaGGGCCGTGACTCAGCCAGCTGGAAATTCATGGAGTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: ASGKSQITAISVYSS*GRDSASWKFMESQR
Trigger: TCGCTGGGACTCCATGAATTTCCAGCTGGCTGAGTCACGGCCCAAAGAGCTGTATACCGAGATGGCTGTTATCTGGCTCTTGCCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCTTCCTGTTTTGTGAGCCTGGCTCCAAGCCCATGTTaGGCCACTCTGTGGGAGTCCGGCAATCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: ASCFVSLAPSPC*ATLWESGNQTL
Trigger: AAGAGTTTGATTGCCGGACTCCCACAGAGTGGCTCAACATGGGCTTGGAGCCAGGCTCACAAAACAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CTCAAATTCCTCCAGGCGGCTGTACTTGGAGAGGCTTaGGTGGAACAGGGACATGGAGGTCACCTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: LKFLQAAVLGEA*VEQGHGGHLVA
Trigger: TGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAGCCGCCTGGAGGAATTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CAGCATGGGTGGCCAGGATACCCTTGTCAAAGAGGTTaGGCAGAATCATCTCGAAGTGCTCTAGAGGCGTGC +
Preference number: 6 (lower is better)
Translates to: QHGWPGYPCQRG*AESSRSALEAC
Trigger: GCACGCCTCTAGAGCACTTCGAGATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGTCGTCGAGCAGTTGTGAGGCTTCGTCTGGGCTCTTaGGGATATAGGTGTCTGTCTCCTTGTAGGGCAACA +
Preference number: 6 (lower is better)
Translates to: GRRAVVRLRLGS*GYRCLSPCRAT
Trigger: TGTTGCCCTACAAGGAGACAGACACCTATATCCTCAAGAGCCCAGACGAAGCCTCACAACTGCTCGACGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CGTCCACGAAGAGGACCAGCCTCAGCTTGGCTGTGTTaGTCTGGTTGTAGTCCTCCATGTACTCCTCGATCA +
Preference number: 6 (lower is better)
Translates to: RPRRGPASAWLC*SGCSPPCTPRS
Trigger: TGATCGAGGAGTACATGGAGGACTACAACCAGATCAACACAGCCAAGCTGAGGCTGGTCCTCTTCGTGGACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp AGGTATGCGTTCCAGATGCCAGGCAAGAGCTCCCTGTaGGGCTCAGCACTGTCAAAGATGGCCTGGAATTCT +
Preference number: 6 (lower is better)
Translates to: RYAFQMPGKSSL*GSALSKMAWNS
Trigger: AGAATTCCAGGCCATCTTTGACAGTGCTGAGCCTCACAGGGAGCTCTTGCCTGGCATCTGGAACGCATACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GATAACAGCCATCTCGGTATACAGCTCTTTGGGCCGTaGCTCAGCCAGCTGGAAATTCATGGAGTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: DNSHLGIQLFGP*LSQLEIHGVPA
Trigger: CGCTGGGACTCCATGAATTTCCAGCTGGCTGAGTCACGGCCCAAAGAGCTGTATACCGAGATGGCTGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATCCGCGCTGCTTCATCAGGGGGTACTTCTTATCAGTaGCTGTCAAAGGCGACTTCCTGGGCTGTCTTAGGT +
Preference number: 6 (lower is better)
Translates to: IRAASSGGTSYQ*LSKATSWAVLG
Trigger: ACCTAAGACAGCCCAGGAAGTCGCCTTTGACAGGCACTGATAAGAAGTACCCCCTGATGAAGCAGCGCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GTCAACAGCTGCTCAATGTCCAGGCGCAAGTATTGCTaGTTCCTCCTCTCGATCTCAATCTTCCGAGGGCAC +
Preference number: 6 (lower is better)
Translates to: VNSCSMSRRKYC*FLLSISIFRGH
Trigger: GTGCCCTCGGAAGATTGAGATCGAGAGGAGGAAGCAGCAATACTTGCGCCTGGACATTGAGCAGCTGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTGGTCAACAGCTGCTCAATGTCCAGGCGCAAGTATTaGTGCTTCCTCCTCTCGATCTCAATCTTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: LVNSCSMSRRKY*CFLLSISIFRG
Trigger: CCCTCGGAAGATTGAGATCGAGAGGAGGAAGCAGCAATACTTGCGCCTGGACATTGAGCAGCTGTTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp AGCTTGTTAGAGTCGATGCCCTCGCTGGTCAACAGCTaGTCAATGTCCAGGCGCAAGTATTGCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SLLESMPSLVNS*SMSRRKYCCFL
Trigger: GAGGAAGCAGCAATACTTGCGCCTGGACATTGAGCAGCTGTTGACCAGCGAGGGCATCGACTCTAACAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp AAGAGTGGATCACGGCCCTGTTCGATGGTTTGTGGGTaGTGCAGGTCTGGATGTCTGGGCATGAGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: KSGSRPCSMVCG*CRSGCLGMSLL
Trigger: TAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCATCCTCAACGTGTTGCTGCCGCACCATATCTATCTaGCCAAGGATCTTAGAGGGCCAGTTGTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SSSTCCCRTISI*PRILEGQLLAA
Trigger: GGCTGCCAACAACTGGCCCTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ACACGGCAGTTCTCATGGTACCATAGCCGCAGCAGCTaGACCTTGTCCTCAACCTTAGATGGTTCAGCCATG +
Preference number: 6 (lower is better)
Translates to: TRQFSWYHSRSS*TLSSTLDGSAM
Trigger: CATGGCTGAACCATCTAAGGTTGAGGACAAGGTGCAGCTGCTGCGGCTATGGTACCATGAGAACTGCCGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTTCCATCTGGGCTTCAAGGAGTTCATCAAACCAGCTaGGGTCTTCCTCATTCACCAGGCGGTCACGGAACA +
Preference number: 6 (lower is better)
Translates to: LPSGLQGVHQTS*GLPHSPGGHGT
Trigger: TGTTCCGTGACCGCCTGGTGAATGAGGAAGACCGCAGCTGGTTTGATGAACTCCTTGAAGCCCAGATGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ACTCAGGAACGTGGTGGCCACAGATTTCAGGGCCTCTaGTGGCCACTCGTTAAACCAGTCAATGGTACAGCA +
Preference number: 6 (lower is better)
Translates to: TQERGGHRFQGL*WPLVKPVNGTA
Trigger: TGCTGTACCATTGACTGGTTTAACGAGTGGCCAGCAGAGGCCCTGAAATCTGTGGCCACCACGTTCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGTCAAGCATGTTCTCCAGATTCTCCACGGTCTCCTaGCAGCGAACCTTTTCGTCGGCTAGCCCGTTGATG +
Preference number: 6 (lower is better)
Translates to: LSSMFSRFSTVS*QRTFSSASPLM
Trigger: CATCAACGGGCTAGCCGACGAAAAGGTTCGCTGGCAGGAGACCGTGGAGAATCTGGAGAACATGCTTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GATGAGGGGCGTTGTGGAGTTGGACTCTTTGAACACTaGAGACAGATTGGCTGTCTGGGGCTCAATGAAGCG +
Preference number: 6 (lower is better)
Translates to: DEGRCGVGLFEH*RQIGCLGLNEA
Trigger: CGCTTCATTGAGCCCCAGACAGCCAATCTGTCTGCAGTGTTCAAAGAGTCCAACTCCACAACGCCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TCCCGGCTCTGGCCGCCCATAGAAGAGGATTTGGGCTaGAGCTGGAGAATGGCATTAAATAAGGCAAACGTC +
Preference number: 6 (lower is better)
Translates to: SRLWPPIEEDLG*SWRMALNKANV
Trigger: GACGTTTGCCTTATTTAATGCCATTCTCCAGCTGCAGCCCAAATCCTCTTCTATGGGCGGCCAGAGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTCAGCCCGCACCTTGCTCAGAGCTGTGATGACTTCTaGTCGAGTGAGCAGGGACACAAAAGTGAAGTCCTC +
Preference number: 6 (lower is better)
Translates to: FSPHLAQSCDDF*SSEQGHKSEVL
Trigger: GAGGACTTCACTTTTGTGTCCCTGCTCACTCGACCAGAAGTCATCACAGCTCTGAGCAAGGTGCGGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AACATGAAGCGTTCCACCCTCTGTTGCTGTGCCTTCTaGATGGTAGTGATCTGCTGTGCCACCACCGATAGC +
Preference number: 6 (lower is better)
Translates to: NMKRSTLCCCAF*MVVICCATTDS
Trigger: GCTATCGGTGGTGGCACAGCAGATCACTACCATCCAGAAGGCACAGCAACAGAGGGTGGAACGCTTCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAGGAACGTGGTGGCCACAGATTTCAGGGCCTCTGCTaGCCACTCGTTAAACCAGTCAATGGTACAGCAGTT +
Preference number: 6 (lower is better)
Translates to: QERGGHRFQGLC*PLVKPVNGTAV
Trigger: AACTGCTGTACCATTGACTGGTTTAACGAGTGGCCAGCAGAGGCCCTGAAATCTGTGGCCACCACGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GTGCAGGCTTTGGACACCTTGGCAATGGCAGCTGGCTaGAACTCCTCATTGTCGATATATGGCTGGATGGCT +
Preference number: 6 (lower is better)
Translates to: VQALDTLAMAAG*NSSLSIYGWMA
Trigger: AGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AGCTCCTGGCGCATCTTGGCATTACTGACAATCAGCTaGTTCTTGGCCTCTTCCAGGTCAGGTCGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSWRILALLTIS*FLASSRSGRSS
Trigger: TGAGGAACGACCTGACCTGGAAGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTATCCCCACGCAGGCAACGGAGAATAAGCAGTTTCTaGAACTCGTCCAGGTATGCGTTCCAGATGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LSPRRQRRISSF*NSSRYAFQMPG
Trigger: GCCTGGCATCTGGAACGCATACCTGGACGAGTTCCAGAAACTGCTTATTCTCCGTTGCCTGCGTGGGGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GCTGGTCAACAGCTGCTCAATGTCCAGGCGCAAGTATaGCTGCTTCCTCCTCTCGATCTCAATCTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: AGQQLLNVQAQV*LLPPLDLNLPR
Trigger: CCTCGGAAGATTGAGATCGAGAGGAGGAAGCAGCAATACTTGCGCCTGGACATTGAGCAGCTGTTGACCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCGAGTGAGCAGGGACACAAAAGTGAAGTCCTCCTTTaGCTCCCGGAAGGGGTATTCAGGGACACTCACCAG +
Preference number: 6 (lower is better)
Translates to: SSEQGHKSEVLL*LPEGVFRDTHQ
Trigger: CTGGTGAGTGTCCCTGAATACCCCTTCCGGGAGCAAAAGGAGGACTTCACTTTTGTGTCCCTGCTCACTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCCAGTTGGGGCACAGCATGGGTGGCCAGGATACCCTaGTCAAAGAGGTTGAGCAGAATCATCTCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: SSWGTAWVARIP*SKRLSRIISKC
Trigger: GCACTTCGAGATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGTGCCCCAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CAGCGGGCAAAGGTCAAGTTGGCCTTGGGCCTGACATaGATGTTGATCTCATTGGACAGTACCTCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: QRAKVKLALGLT*MLISLDSTSQC
Trigger: GCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGCCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AACAGGAAGGTGATGGGCAGGTTCTGCAGGCCAGCCTaGAGCAGAACCTTCTTGACATCTTCACGCCACTCA +
Preference number: 6 (lower is better)
Translates to: NRKVMGRFCRPA*SRTFLTSSRHS
Trigger: TGAGTGGCGTGAAGATGTCAAGAAGGTTCTGCTCAAGGCTGGCCTGCAGAACCTGCCCATCACCTTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTGTGGCGGGCCAGCTCTGCGAGGTACTCAACACATTaGCTGGCCACTGACTGGTGGATAAATACGCAAACC +
Preference number: 6 (lower is better)
Translates to: LWRASSARYSTH*LATDWWINTQT
Trigger: GGTTTGCGTATTTATCCACCAGTCAGTGGCCAGCAAATGTGTTGAGTACCTCGCAGAGCTGGCCCGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACAAAGCCGGCAGCCACCAGCACATCGCCAAAGATGTaGTCAAGCATGTTCTCCAGATTCTCCACGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TKPAATSTSPKM*SSMFSRFSTVS
Trigger: GGAGACCGTGGAGAATCTGGAGAACATGCTTGACAACATCTTTGGCGATGTGCTGGTGGCTGCCGGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TGGCGCATCTTGGCATTACTGACAATCAGCTGGTTCTaGGCCTCTTCCAGGTCAGGTCGTTCCTCAGCCACT +
Preference number: 6 (lower is better)
Translates to: WRILALLTISWF*ASSRSGRSSAT
Trigger: AGTGGCTGAGGAACGACCTGACCTGGAAGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CCAGGTGACAGCACGAAGATGAGGGGCGTTGTGGAGTaGGACTCTTTGAACACTGCAGACAGATTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: PGDSTKMRGVVE*DSLNTADRLAV
Trigger: GACAGCCAATCTGTCTGCAGTGTTCAAAGAGTCCAACTCCACAACGCCCCTCATCTTCGTGCTGTCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TGGGAGATATATGGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTaGTGGGTGCTGCAGGTCTGGATGTCTGGGCATGAGCTTGTTAGA +
Preference number: 6 (lower is better)
Translates to: WEIYGEEWITALFDG*WVLQVWMSGHELVR
Trigger: TCTAACAAGCTCATGCCCAGACATCCAGACCTGCAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GACTTCTGGTCGAGTGAGCAGGGACACAAAAGTGAAGTCCTCCTTTaGCTCCCGGAAGGGGTATTCAGGGACACTCACCAGCCCTTGATT +
Preference number: 6 (lower is better)
Translates to: DFWSSEQGHKSEVLL*LPEGVFRDTHQPLI
Trigger: AATCAAGGGCTGGTGAGTGTCCCTGAATACCCCTTCCGGGAGCAAAAGGAGGACTTCACTTTTGTGTCCCTGCTCACTCGACCAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TACTTGGAGAGGCTTGAGTGGAACAGGGACATGGAGGTCACCTTGTaGCATTCAGCCCGCACCTTGCTCAGAGCTGTGATGACTTCTGGT +
Preference number: 6 (lower is better)
Translates to: YLERLEWNRDMEVTL*HSARTLLRAVMTSG
Trigger: ACCAGAAGTCATCACAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CTGTACTTGGAGAGGCTTGAGTGGAACAGGGACATGGAGGTCACCTaGTTGCATTCAGCCCGCACCTTGCTCAGAGCTGTGATGACTTCT +
Preference number: 6 (lower is better)
Translates to: LYLERLEWNRDMEVT*LHSARTLLRAVMTS
Trigger: AGAAGTCATCACAGCTCTGAGCAAGGTGCGGGCTGAATGCAACAAGGTGACCTCCATGTCCCTGTTCCACTCAAGCCTCTCCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGCTCCATCAGCTTGCGCAGCTTTGACATGAGGTACACCTCCCAGTaGGTCTCATACAGGTTGTACCAGCCCTTGCTCATGTCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: SSISLRSFDMRYTSQ*VSYRLYQPLLMSRR
Trigger: CCTTCGAGACATGAGCAAGGGCTGGTACAACCTGTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCTGATGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AAGCGCAGCGTGTCCTGCAGCATGTACTTGATGAGCTCCATCAGCTaGCGCAGCTTTGACATGAGGTACACCTCCCAGTTGGTCTCATAC +
Preference number: 6 (lower is better)
Translates to: KRSVSCSMYLMSSIS*RSFDMRYTSQLVSY
Trigger: GTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCTGATGGAGCTCATCAAGTACATGCTGCAGGACACGCTGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CTTTCAGGAACCTTCACCGGACAGTATCCTGGGCCCTaGGAGCTGCTGCTTGGTCCTTCTTTATTACACTCC +
Preference number: 6 (lower is better)
Translates to: LSGTFTGQYPGP*ELLLGPSLLHS
Trigger: GGAGTGTAATAAAGAAGGACCAAGCAGCAGCTCTCAGGGCCCAGGATACTGTCCGGTGAAGGTTCCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp ACTCTGAGTCATGACGATGTGGTCGTCGAGCAGTTGTaGGGCTTCGTCTGGGCTCTTGAGGATATAGGTGTC +
Preference number: 6 (lower is better)
Translates to: TLSHDDVVVEQL*GFVWALEDIGV
Trigger: GACACCTATATCCTCAAGAGCCCAGACGAAGCCTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCCTCCCACTGTTGCCAAGGTACTCGTAGCCATAGATaGACTCGGCATTCACAGCACGGATGTATAGGTCGT +
Preference number: 6 (lower is better)
Translates to: ASHCCQGTRSHR*TRHSQHGCIGR
Trigger: ACGACCTATACATCCGTGCTGTGAATGCCGAGTTCATCTATGGCTACGAGTACCTTGGCAACAGTGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CAATGTCCTTCAGCTCCTGGCGCATCTTGGCATTACTaGCAATCAGCTGGTTCTTGGCCTCTTCCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: QCPSAPGASWHY*QSAGSWPLPGQ
Trigger: CTGACCTGGAAGAGGCCAAGAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCTGAAGGACATTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CAATCCGCTCCTCCAGAAATACCAGCTTTTCAGGAATaGCCTTCATCCAGTCTCGAAGCTCCGCAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: QSAPPEIPAFQE*PSSSLEAPQAP
Trigger: AGGAGCTTGCGGAGCTTCGAGACTGGATGAAGGGCATTCCTGAAAAGCTGGTATTTCTGGAGGAGCGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GATGGATGGCTTCCCTTTCAGCAATGTCATGGCGGCTaGCAGGACTCTGTAACAATTACTCTTGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: DGWLPFQQCHGG*QDSVTITLARA
Trigger: GGCTCTGGCAAGAGTAATTGTTACAGAGTCCTGGCAGCCGCCATGACATTGCTGAAAGGGAAGCCATCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATCACTGTGTCTCCCAGCTTCAGGACTATGTTCCCTTaGTGCTTGTACGTCTGCTTAAGCAGCACAGGCTCC +
Preference number: 6 (lower is better)
Translates to: ITVSPSFRTMFP*CLYVCLSSTGS
Trigger: GGAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACACAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TACTCCATGCGTGTGAGGTCAATGTCCTTCTCTGTCTaGTCGGCAATCCTGACCTTAGCCTGGATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: YSMRVRSMSFSV*SAILTLAWISA
Trigger: TGCTGAGATCCAGGCTAAGGTCAGGATTGCCGAGCAGACAGAGAAGGACATTGACCTCACACGCATGGAGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TTGGTGCCAAGTGGCAGTTCTGAAAGAAGACCCACTTaGCCCTCTCTATGGAGTTGCGCATCATGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LVPSGSSERRPT*PSLWSCASWLL
Trigger: CAGAAGCCATGATGCGCAACTCCATAGAGAGGGGCAAGTGGGTCTTCTTTCAGAACTGCCACTTGGCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAACTTCACACCATCTATAGTCCAGTTCCTGATTCTTaGGGTCCTCGTGCCCCAGATCGTCGTCTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: QLHTIYSPVPDS*GPRAPDRRLWE
Trigger: TTCCCACAGACGACGATCTGGGGCACGAGGACCCCAAGAATCAGGAACTGGACTATAGATGGTGTGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCCTCTATGCGTGTTCGGATATCCAAAGCCACCTCCTaGCAGGCTGGGATGTCCTTGAACTGCTTCACACAT +
Preference number: 6 (lower is better)
Translates to: SSMRVRISKATS*QAGMSLNCFTH
Trigger: ATGTGTGAAGCAGTTCAAGGACATCCCAGCCTGCCAGGAGGTGGCTTTGGATATCCGAACACGCATAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CATGGTGGGCACAATGATGTTGCAGTAGTTGGTGTCTaGCATCATGGTGAATGGGGCCGAGTAGTCCATCCA +
Preference number: 6 (lower is better)
Translates to: HGGHNDVAVVGV*HHGEWGRVVHP
Trigger: TGGATGGACTACTCGGCCCCATTCACCATGATGCCAGACACCAACTACTGCAACATCATTGTGCCCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAGCCCCTGAATCACTTCCTCCGAACATTCCAGTTCTaGGATCTCACTCAGGAACGTGGTGGCCACAGATTT +
Preference number: 6 (lower is better)
Translates to: QPLNHFLRTFQF*DLTQERGGHRF
Trigger: AAATCTGTGGCCACCACGTTCCTGAGTGAGATCCCAGAACTGGAATGTTCGGAGGAAGTGATTCAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGCTTGCGCAGCTTTGACATGAGGTACACCTCCCAGTaGGTCTCATACAGGTTGTACCAGCCCTTGCTCATG +
Preference number: 6 (lower is better)
Translates to: SLRSFDMRYTSQ*VSYRLYQPLLM
Trigger: CATGAGCAAGGGCTGGTACAACCTGTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTGTCCTGCAGCATGTACTTGATGAGCTCCATCAGCTaGCGCAGCTTTGACATGAGGTACACCTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: VSCSMYLMSSIS*RSFDMRYTSQL
Trigger: CAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCTGATGGAGCTCATCAAGTACATGCTGCAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACAGCATGGGTGGCCAGGATACCCTTGTCAAAGAGGTaGAGCAGAATCATCTCGAAGTGCTCTAGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: TAWVARIPLSKR*SRIISKCSRGV
Trigger: CACGCCTCTAGAGCACTTCGAGATGATTCTGCTCAACCTCTTTGACAAGGGTATCCTGGCCACCCATGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAGTTGGCCTTGGGCCTGACATTGATGTTGATCTCATaGGACAGTACCTCCCAGTGCCGGTTCCGCATACCA +
Preference number: 6 (lower is better)
Translates to: KLALGLTLMLIS*DSTSQCRFRIP
Trigger: TGGTATGCGGAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GCAAAGGTCAAGTTGGCCTTGGGCCTGACATTGATGTaGATCTCATTGGACAGTACCTCCCAGTGCCGGTTC +
Preference number: 6 (lower is better)
Translates to: AKVKLALGLTLM*ISLDSTSQCRF
Trigger: GAACCGGCACTGGGAGGTACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCCAGCTCCTCACCCACATTTTCTAGAAGGCATGGCTaGCCAAAGCGGATAGCATTTTCCATGCTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSSSPTFSRRHG*PKRIAFSMLRR
Trigger: CCTGCGCAGCATGGAAAATGCTATCCGCTTTGGCAAGCCATGCCTTCTAGAAAATGTGGGTGAGGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GATCACTGTGTCTCCCAGCTTCAGGACTATGTTCCCTaGCTGCTTGTACGTCTGCTTAAGCAGCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: DHCVSQLQDYVP*LLVRLLKQHRL
Trigger: GAGCCTGTGCTGCTTAAGCAGACGTACAAGCAGCAAGGGAACATAGTCCTGAAGCTGGGAGACACAGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGAGGTACACCTCCCAGTTGGTCTCATACAGGTTGTACCAGCCCTaGCTCATGTCTCGAAGGCTGCCGCGCATAGCTACTTTCAATGTG +
Preference number: 6 (lower is better)
Translates to: MRYTSQLVSYRLYQP*LMSRRLPRIATFNV
Trigger: CACATTGAAAGTAGCTATGCGCGGCAGCCTTCGAGACATGAGCAAGGGCTGGTACAACCTGTATGAGACCAACTGGGAGGTGTACCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTCCATGAGCTGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTaGCTGCCGCACCATATCTATCTGCCCAAGGATCTTAGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: VHELDFAELLLILNV*LPHHIYLPKDLRGP
Trigger: TGGCCCTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CCTTCCAGCTTCTCCTGGAAGTTGTTCTGGTCCATGAGCTGGATTTaGCGGAACTTCTCCTCATCCTCAACGTGTTGCTGCCGCACCATA +
Preference number: 6 (lower is better)
Translates to: PSSFSWKLFWSMSWI*RNFSSSSTCCCRTI
Trigger: TATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GCCACCTCCTGGCAGGCTGGGATGTCCTTGAACTGCTTCACACATTaGTGCATGGTCTTGAACGACTCAATGACATTCTTCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: ATSWQAGMSLNCFTH*CMVLNDSMTFFSSC
Trigger: GCAGCTGGAGAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATGTGTGAAGCAGTTCAAGGACATCCCAGCCTGCCAGGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TGTACGCTGACTACATTCTCATCGATCAGCTTGCTCACCACATCCTaGGCGTGGACCTCAATGACAATGAGTGCCGAAAGCACCATCCGC +
Preference number: 6 (lower is better)
Translates to: CTLTTFSSISLLTTS*AWTSMTMSAESTIR
Trigger: GCGGATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAATGTAGTCAGCGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CAGGCTTTGGACACCTTGGCAATGGCAGCTGGCTGGAACTCCTCATaGTCGATATATGGCTGGATGGCTTTGATAACTGCCTCCCCAATG +
Preference number: 6 (lower is better)
Translates to: QALDTLAMAAGWNSS*SIYGWMALITASPM
Trigger: CATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGGCCCTCTCTGGGTAGGAAAGGTCTGAAGAAGCAGTCAAGGAGCTaGAGGAGGCTCATTGTCAGGTTGCTGTTAGTTGAGGCAATCACT +
Preference number: 6 (lower is better)
Translates to: RPSLGRKGLKKQSRS*RRLIVRLLLVEAIT
Trigger: AGTGATTGCCTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTCCTTGACTGCTTCTTCAGACCTTTCCTACCCAGAGAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GCCCTTCCAGCTTCTCCTGGAAGTTGTTCTGGTCCATaGGCTGGATTTTGCGGAACTTCTCCTCATCCTCAA +
Preference number: 6 (lower is better)
Translates to: ALPASPGSCSGP*AGFCGTSPHPQ
Trigger: TTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp AGGATGGTACAAGGGGGATTTCAACACCCTCAAACATaGAGCGTTCCACCCTCTGTTGCTGTGCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: RMVQGGFQHPQT*SVPPSVAVPSG
Trigger: TCCAGAAGGCACAGCAACAGAGGGTGGAACGCTTCATGTTTGAGGGTGTTGAAATCCCCCTTGTACCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TTCCTTGATGGTAGGGAACAGGTCAGACACAATCCCTaGGAAGAGCTTGAGGTCTTCCTGCAGGAACTTCGG +
Preference number: 6 (lower is better)
Translates to: FLDGREQVRHNP*EELEVFLQELR
Trigger: CCGAAGTTCCTGCAGGAAGACCTCAAGCTCTTCTCAGGGATTGTGTCTGACCTGTTCCCTACCATCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ATCAAACACCTTCAGTGGGAGATATATGGGGAAGAGTaGATCACGGCCCTGTTCGATGGTTTGTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: IKHLQWEIYGEE*ITALFDGLWVL
Trigger: CAGCACCCACAAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTCCCACTGAAGGTGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTCTCATCGATCAGCTTGCTCACCACATCCTTGGCGTaGACCTCAATGACAATGAGTGCCGAAAGCACCATC +
Preference number: 6 (lower is better)
Translates to: FSSISLLTTSLA*TSMTMSAESTI
Trigger: GATGGTGCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GATGTTGCAGTAGTTGGTGTCTGGCATCATGGTGAATaGGGCCGAGTAGTCCATCCACTTTACCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: DVAVVGVWHHGE*GRVVHPLYPGN
Trigger: GTTTCCTGGGTAAAGTGGATGGACTACTCGGCCCCATTCACCATGATGCCAGACACCAACTACTGCAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAGACTTTGTTGAAGGCCACCCCAAACTCTTCCATCTaGGCTTCAAGGAGTTCATCAAACCAGCTGCGGTCT +
Preference number: 6 (lower is better)
Translates to: QTLLKATPNSSI*ASRSSSNQLRS
Trigger: AGACCGCAGCTGGTTTGATGAACTCCTTGAAGCCCAGATGGAAGAGTTTGGGGTGGCCTTCAACAAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GCAGCTGGCTGGAACTCCTCATTGTCGATATATGGCTaGATGGCTTTGATAACTGCCTCCCCAATGTTGTCC +
Preference number: 6 (lower is better)
Translates to: AAGWNSSLSIYG*MALITASPMLS
Trigger: GGACAACATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AGATGTGCAGGCTTTGGACACCTTGGCAATGGCAGCTaGCTGGAACTCCTCATTGTCGATATATGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: RCAGFGHLGNGS*LELLIVDIWLD
Trigger: ATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTCCAAAGCCTGCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CGGTACAGTATCTGGTCCTCAATGTCCTTCAGCTCCTaGCGCATCTTGGCATTACTGACAATCAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: RYSIWSSMSFSS*RILALLTISWF
Trigger: GAACCAGCTGATTGTCAGTAATGCCAAGATGCGCCAGGAGCTGAAGGACATTGAGGACCAGATACTGTACCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTCATCTCCAGGCAGCGGGCAAAGGTCAAGTTGGCCTaGGGCCTGACATTGATGTTGATCTCATTGGACAGT +
Preference number: 6 (lower is better)
Translates to: FISRQRAKVKLA*GLTLMLISLDS
Trigger: ACTGTCCAATGAGATCAACATCAATGTCAGGCCCAAGGCCAACTTGACCTTTGCCCGCTGCCTGGAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTTCCCATGGCCATGAAGTCGAGCTGGTCAGAACAGTaGAACACAACTGTCTGTATGGCTAAGGCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: FPMAMKSSWSEQ*NTTVCMAKAFP
Trigger: GGGGAAGGCCTTAGCCATACAGACAGTTGTGTTCAACTGTTCTGACCAGCTCGACTTCATGGCCATGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTAGGGAACAGGTCAGACACAATCCCTGAGAAGAGCTaGAGGTCTTCCTGCAGGAACTTCGGCACATTCACA +
Preference number: 6 (lower is better)
Translates to: VGNRSDTIPEKS*RSSCRNFGTFT
Trigger: TGTGAATGTGCCGAAGTTCCTGCAGGAAGACCTCAAGCTCTTCTCAGGGATTGTGTCTGACCTGTTCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CAGTTCTCATGGTACCATAGCCGCAGCAGCTGCACCTaGTCCTCAACCTTAGATGGTTCAGCCATGAGCATT +
Preference number: 6 (lower is better)
Translates to: QFSWYHSRSSCT*SSTLDGSAMSI
Trigger: AATGCTCATGGCTGAACCATCTAAGGTTGAGGACAAGGTGCAGCTGCTGCGGCTATGGTACCATGAGAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GACACCTTGGCAATGGCAGCTGGCTGGAACTCCTCATaGTCGATATATGGCTGGATGGCTTTGATAACTGCC +
Preference number: 6 (lower is better)
Translates to: DTLAMAAGWNSS*SIYGWMALITA
Trigger: GGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATTGCCAAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATAATACGGACACACAGCAGGAAGGCGAACATCAGCTaGTGCTTCTCAAAGAGGCTGCGGCAGACGTTGCTA +
Preference number: 6 (lower is better)
Translates to: IIRTHSRKANIS*CFSKRLRQTLL
Trigger: TAGCAACGTCTGCCGCAGCCTCTTTGAGAAGCACAAGCTGATGTTCGCCTTCCTGCTGTGTGTCCGTATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAGAGCCAGATAACAGCCATCTCGGTATACAGCTCTTaGGGCCGTGACTCAGCCAGCTGGAAATTCATGGAG +
Preference number: 6 (lower is better)
Translates to: KSQITAISVYSS*GRDSASWKFME
Trigger: CTCCATGAATTTCCAGCTGGCTGAGTCACGGCCCAAAGAGCTGTATACCGAGATGGCTGTTATCTGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CTGCGGAACTCCTCACAGATACTGTCTACCTCCTTGTGTAAGTTCTaGGCTAGGATATCCAGCATAGAAGTGGCCAGGGCCTTGCGTTTT +
Preference number: 6 (lower is better)
Translates to: LRNSSQILSTSLCKF*ARISSIEVARALRF
Trigger: AAAACGCAAGGCCCTGGCCACTTCTATGCTGGATATCCTAGCCAAGAACTTACACAAGGAGGTAGACAGTATCTGTGAGGAGTTCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCCTTGATGGTAGGGAACAGGTCAGACACAATCCCTGAGAAGAGCTaGAGGTCTTCCTGCAGGAACTTCGGCACATTCACATCTCGAATG +
Preference number: 6 (lower is better)
Translates to: SLMVGNRSDTIPEKS*RSSCRNFGTFTSRM
Trigger: CATTCGAGATGTGAATGTGCCGAAGTTCCTGCAGGAAGACCTCAAGCTCTTCTCAGGGATTGTGTCTGACCTGTTCCCTACCATCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATCAGCTCGAGCTCCAAGGACATTACCACTAGCCCCTTAATTGCCTaGAGCATGTCACTAAGGGTCTGTGTGATCACCTCTAGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: ISSSSKDITTSPLIA*SMSLRVCVITSRSL
Trigger: CAAGCTCCTAGAGGTGATCACACAGACCCTTAGTGACATGCTCAAGGCAATTAAGGGGCTAGTGGTAATGTCCTTGGAGCTCGAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp AGCACACATTCCCAAGCTTGTCTAAGGTTCCAGGGCTaGGGATGTCAGAATAGAATCCGCGCTGCTTCATCA +
Preference number: 6 (lower is better)
Translates to: STHSQACLRFQG*GCQNRIRAASS
Trigger: TGATGAAGCAGCGCGGATTCTATTCTGACATCCTCAGCCCTGGAACCTTAGACAAGCTTGGGAATGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp CATGTACTTGATGAGCTCCATCAGCTTGCGCAGCTTTaGCATGAGGTACACCTCCCAGTTGGTCTCATACAG +
Preference number: 6 (lower is better)
Translates to: HVLDELHQLAQL*HEVHLPVGLIQ
Trigger: CTGTATGAGACCAACTGGGAGGTGTACCTCATGTCAAAGCTGCGCAAGCTGATGGAGCTCATCAAGTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GTTTCTTGTACGGTGAGAAGGACATACTCTGAGTCATaGCGATGTGGTCGTCGAGCAGTTGTGAGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: VSCTVRRTYSES*RCGRRAVVRLR
Trigger: ACGAAGCCTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGAGTTGATGCGCTGCTCAAAGGGTTTCTTGTACGGTaGGAAGGACATACTCTGAGTCATGACGATGTGGTC +
Preference number: 6 (lower is better)
Translates to: GVDALLKGFLVR*EGHTLSHDDVV
Trigger: GACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAACCCTTTGAGCAGCGCATCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TTTCCATGCTGCGCAGGAAGTCACGGTCACTCAACTTaGATACATCCAGCCCACTTTCCCTCTCCATGTTCT +
Preference number: 6 (lower is better)
Translates to: FPCCAGSHGHST*IHPAHFPSPCS
Trigger: AGAACATGGAGAGGGAAAGTGGGCTGGATGTATTCAAGTTGAGTGACCGTGACTTCCTGCGCAGCATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GTGAGGCTCAGCACTGTCAAAGATGGCCTGGAATTCTaGGAGGTACATCACGAAGTCATTAGAGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: VRLSTVKDGLEF*EVHHEVIREGG
Trigger: GCCACCTTCTCTAATGACTTCGTGATGTACCTCTCAGAATTCCAGGCCATCTTTGACAGTGCTGAGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TTTTCCAGAGCTCAGGCACAGTGTTGTTGTACAGGCTaGTGGACATCAGCTCGAGCTCCAAGGACATTACCA +
Preference number: 6 (lower is better)
Translates to: FSRAQAQCCCTG*WTSARAPRTLP
Trigger: TGGTAATGTCCTTGGAGCTCGAGCTGATGTCCATCAGCCTGTACAACAACACTGTGCCTGAGCTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GTCAGCTTCAGTTTGGTCTCCCAGGAGTTGATGCGCTaGTCAAAGGGTTTCTTGTACGGTGAGAAGGACATA +
Preference number: 6 (lower is better)
Translates to: VSFSLVSQELMR*SKGFLYGEKDI
Trigger: TATGTCCTTCTCACCGTACAAGAAACCCTTTGAGCAGCGCATCAACTCCTGGGAGACCAAACTGAAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTCTTCTTCATCATCATCCTCAGTGCTACTGATTCCTaGGTCATCCAGTCTGTAATCGTACACCAGCCCGTC +
Preference number: 6 (lower is better)
Translates to: LFFIIILSATDS*VIQSVIVHQPV
Trigger: GACGGGCTGGTGTACGATTACAGACTGGATGACGCAGGAATCAGTAGCACTGAGGATGATGATGAAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCCAGCTTCTCCTGGAAGTTGTTCTGGTCCATGAGCTaGATTTTGCGGAACTTCTCCTCATCCTCAACGTGT +
Preference number: 6 (lower is better)
Translates to: SSFSWKLFWSMS*ILRNFSSSSTC
Trigger: ACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCCTCAACCTTAGATGGTTCAGCCATGAGCATTCCCTaGAAGACTTTGGACAGGTCCCTCAGGTTAAAGGTG +
Preference number: 6 (lower is better)
Translates to: SSTLDGSAMSIP*KTLDRSLRLKV
Trigger: CACCTTTAACCTGAGGGACCTGTCCAAAGTCTTCCAGGGAATGCTCATGGCTGAACCATCTAAGGTTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GATGTAGGAGAGGTATCCATTGAGGTCATAGGTGGGTaGGATCTGGTGGTAGATGCCAGAGTTACTGTAGCT +
Preference number: 6 (lower is better)
Translates to: DVGEVSIEVIGG*DLVVDARVTVA
Trigger: AGCTACAGTAACTCTGGCATCTACCACCAGATCCCACCCACCTATGACCTCAATGGATACCTCTCCTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GTAGAAGTCCTGGTTCTGGACCTTTCGGTTAGCTTCTaGCAAGAGCCAGATAACAGCCATCTCGGTATACAG +
Preference number: 6 (lower is better)
Translates to: VEVLVLDLSVSF*QEPDNSHLGIQ
Trigger: CTGTATACCGAGATGGCTGTTATCTGGCTCTTGCCAGAAGCTAACCGAAAGGTCCAGAACCAGGACTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CTGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTaGCTGCCGCACCATATCTATCTGCCCAAGGATCTT +
Preference number: 6 (lower is better)
Translates to: LDFAELLLILNV*LPHHIYLPKDL
Trigger: AAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTCTCCTGGAAGTTGTTCTGGTCCATGAGCTGGATTTaGCGGAACTTCTCCTCATCCTCAACGTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSWKLFWSMSWI*RNFSSSSTCCC
Trigger: GCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCAGCTCATGGACCAGAACAACTTCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ACTACATTCTCATCGATCAGCTTGCTCACCACATCCTaGGCGTGGACCTCAATGACAATGAGTGCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: TTFSSISLLTTS*AWTSMTMSAES
Trigger: GCTTTCGGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAATGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTGGTGGTGATCTTCTTAGCCAGCACATTGGCCTCGTaGAAGCCGAAGGAATACAGTGAGATCTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: VVVIFLASTLAS*KPKEYSEISAI
Trigger: GATTGCTGAGATCTCACTGTATTCCTTCGGCTTCAACGAGGCCAATGTGCTGGCTAAGAAGATCACCACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AGCTTGAAGGTGGTGGTGATCTTCTTAGCCAGCACATaGGCCTCGTTGAAGCCGAAGGAATACAGTGAGATC +
Preference number: 6 (lower is better)
Translates to: SLKVVVIFLAST*ASLKPKEYSEI
Trigger: GATCTCACTGTATTCCTTCGGCTTCAACGAGGCCAATGTGCTGGCTAAGAAGATCACCACCACCTTCAAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CTGGGTAGGAAAGGTCTGAAGAAGCAGTCAAGGAGCTaGAGGAGGCTCATTGTCAGGTTGCTGTTAGTTGAG +
Preference number: 6 (lower is better)
Translates to: LGRKGLKKQSRS*RRLIVRLLLVE
Trigger: CTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTCCTTGACTGCTTCTTCAGACCTTTCCTACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTGATAACTGCCTCCCCAATGTTGTCCTTGTCAAACTaGAAGAGGCTTTCAAGGAAGCGGCCTGGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: LITASPMLSLSN*KRLSRKRPGSC
Trigger: GCAAGACCCAGGCCGCTTCCTTGAAAGCCTCTTCAAGTTTGACAAGGACAACATTGGGGAGGCAGTTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TTTTCCATGCTGCGCAGGAAGTCACGGTCACTCAACTaGAATACATCCAGCCCACTTTCCCTCTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: FSMLRRKSRSLN*NTSSPLSLSMF
Trigger: GAACATGGAGAGGGAAAGTGGGCTGGATGTATTCAAGTTGAGTGACCGTGACTTCCTGCGCAGCATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATCCACTCAAAGTCATGTACGCTGACTACATTCTCATCGATCAGCTaGCTCACCACATCCTTGGCGTGGACCTCAATGACAATGAGTGCC +
Preference number: 6 (lower is better)
Translates to: IHSKSCTLTTFSSIS*LTTSLAWTSMTMSA
Trigger: GGCACTCATTGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAATGTAGTCAGCGTACATGACTTTGAGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCAGAAGACAGCTTGAAGGTGGTGGTGATCTTCTTAGCCAGCACATaGGCCTCGTTGAAGCCGAAGGAATACAGTGAGATCTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: SEDSLKVVVIFLAST*ASLKPKEYSEISAI
Trigger: GATTGCTGAGATCTCACTGTATTCCTTCGGCTTCAACGAGGCCAATGTGCTGGCTAAGAAGATCACCACCACCTTCAAGCTGTCTTCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGTCTGAAGAAGCAGTCAAGGAGCTTGAGGAGGCTCATTGTCAGGTaGCTGTTAGTTGAGGCAATCACTTCCTTCACTGTGTTCCGAACA +
Preference number: 6 (lower is better)
Translates to: GLKKQSRSLRRLIVR*LLVEAITSFTVFRT
Trigger: TGTTCGGAACACAGTGAAGGAAGTGATTGCCTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTCCTTGACTGCTTCTTCAGACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TCAGAAGTGCGCAACAGCTTGTCAAGGCCACTCTTCATGCGGTTTTaGGCTGTCTTCAGTTCCATTTTCTTCTGCCCAATGAGGATGGAG +
Preference number: 6 (lower is better)
Translates to: SEVRNSLSRPLFMRF*AVFSSIFFCPMRME
Trigger: CTCCATCCTCATTGGGCAGAAGAAAATGGAACTGAAGACAGCCAAAAACCGCATGAAGAGTGGCCTTGACAAGCTGTTGCGCACTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CGGATAGCATTTTCCATGCTGCGCAGGAAGTCACGGTCACTCAACTaGAATACATCCAGCCCACTTTCCCTCTCCATGTTCTTGATCCAT +
Preference number: 6 (lower is better)
Translates to: RIAFSMLRRKSRSLN*NTSSPLSLSMFLIH
Trigger: ATGGATCAAGAACATGGAGAGGGAAAGTGGGCTGGATGTATTCAAGTTGAGTGACCGTGACTTCCTGCGCAGCATGGAAAATGCTATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GTCTGGGGCCTTTCCTTAATTTCTGATGACGCCTCGGGCAACACCTaGAAATCAAAGGTGATGGTGTCGATAGAGATGACGAACTTTCGG +
Preference number: 6 (lower is better)
Translates to: VWGLSLISDDASGNT*KSKVMVSIEMTNFR
Trigger: CCGAAAGTTCGTCATCTCTATCGACACCATCACCTTTGATTTCAAGGTGTTGCCCGAGGCGTCATCAGAAATTAAGGAAAGGCCCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GTGGTAGCACCAATGATCTGCTGCTCCACACGCTCCTaGAAGTCCTCAGGAATGACGAATGAGTCAACTTTT +
Preference number: 6 (lower is better)
Translates to: VVAPMICCSTRS*KSSGMTNESTF
Trigger: AAAAGTTGACTCATTCGTCATTCCTGAGGACTTTCAGGAGCGTGTGGAGCAGCAGATCATTGGTGCTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GGATATAGGTGTCTGTCTCCTTGTAGGGCAACACGTTaGACAGGATGGATGACCACTCCTTCTCCATCTTGT +
Preference number: 6 (lower is better)
Translates to: GYRCLSPCRATR*TGWMTTPSPSC
Trigger: ACAAGATGGAGAAGGAGTGGTCATCCATCCTGTTCAACGTGTTGCCCTACAAGGAGACAGACACCTATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TCAAAGGGTTTCTTGTACGGTGAGAAGGACATACTCTaGGTCATGACGATGTGGTCGTCGAGCAGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: SKGFLYGEKDIL*VMTMWSSSSCE
Trigger: CTCACAACTGCTCGACGACCACATCGTCATGACTCAGAGTATGTCCTTCTCACCGTACAAGAAACCCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GAGAAGATGAACCAGGGCTCTATCAGCTCTGGGATATaGCTCAACTTTTCAGAGGGTATCTTCTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: EKMNQGSISSGI*LNFSEGIFLRP
Trigger: GGGCCTCAAGAAGATACCCTCTGAAAAGTTGAGTCATATCCCAGAGCTGATAGAGCCCTGGTTCATCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTGCTaGCGCACCATATCTATCTGCCCAAGGATCTTAGAG +
Preference number: 6 (lower is better)
Translates to: ILRNFSSSSTCC*RTISICPRILE
Trigger: CTCTAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp TGGATTTTGCGGAACTTCTCCTCATCCTCAACGTGTTaGTGCCGCACCATATCTATCTGCCCAAGGATCTTA +
Preference number: 6 (lower is better)
Translates to: WILRNFSSSSTC*CRTISICPRIL
Trigger: TAAGATCCTTGGGCAGATAGATATGGTGCGGCAGCAACACGTTGAGGATGAGGAGAAGTTCCGCAAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp GTCTCATTCTGGGCAAAGGTGATGTTGGCGTTGTCATaGAGACCGAAAATCTCAGGCATGTCATTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: VSFWAKVMLALS*RPKISGMSLRG
Trigger: TCCTCTCAATGACATGCCTGAGATTTTCGGTCTGCATGACAACGCCAACATCACCTTTGCCCAGAATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CCGGCAATCAAACTCTTCATTATCAAACACCTTCAGTaGGAGATATATGGGGAAGAGTGGATCACGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PAIKLFIIKHLQ*EIYGEEWITAL
Trigger: CAGGGCCGTGATCCACTCTTCCCCATATATCTCCCACTGAAGGTGTTTGATAATGAAGAGTTTGATTGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp CAGATACTTTCTGTACTCCTTAGCGTAGGCCTGCAGTaGCATCATGGCCTTGTGCATAGCATTCGTGATGTT +
Preference number: 6 (lower is better)
Translates to: QILSVLLSVGLQ*HHGLVHSIRDV
Trigger: AACATCACGAATGCTATGCACAAGGCCATGATGCCACTGCAGGCCTACGCTAAGGAGTACAGAAAGTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp GGCAGAGAGTTGTCTAGGATCTCCTTCTCTTTCAGGTaGGTAATTACCACTTCTCGAACCTCCTCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: GRELSRISFSFR*VITTSRTSSAD
Trigger: ATCAGCAGAGGAGGTTCGAGAAGTGGTAATTACCCACCTGAAAGAGAAGGAGATCCTAGACAACTCTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TCTGCTGAATACATGTGTGTGATCTCCAGATCCTCCTaGAACAGCAACCGGGCAATGTTTTCGAAGCACTTG +
Preference number: 6 (lower is better)
Translates to: SAEYMCVISRSS*NSNRAMFSKHL
Trigger: CAAGTGCTTCGAAAACATTGCCCGGTTGCTGTTCCAGGAGGATCTGGAGATCACACACATGTATTCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp AATGGCAGCTGGCTGGAACTCCTCATTGTCGATATATaGCTGGATGGCTTTGATAACTGCCTCCCCAATGTT +
Preference number: 6 (lower is better)
Translates to: NGSWLELLIVDI*LDGFDNCLPNV
Trigger: AACATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAGGAGTTCCAGCCAGCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATATCTATCTGCCCAAGGATCTTAGAGGGCCAGTTGTaGGCAGCCCATTTGTCATTGAAGTCGTCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: ISICPRILEGQL*AAHLSLKSSVV
Trigger: CACCACAGACGACTTCAATGACAAATGGGCTGCCAACAACTGGCCCTCTAAGATCCTTGGGCAGATAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAGTCATGTACGCTGACTACATTCTCATCGATCAGCTaGCTCACCACATCCTTGGCGTGGACCTCAATGACA +
Preference number: 6 (lower is better)
Translates to: KSCTLTTFSSIS*LTTSLAWTSMT
Trigger: TGTCATTGAGGTCCACGCCAAGGATGTGGTGAGCAAGCTGATCGATGAGAATGTAGTCAGCGTACATGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp AAGCAGTCAAGGAGCTTGAGGAGGCTCATTGTCAGGTaGCTGTTAGTTGAGGCAATCACTTCCTTCACTGTG +
Preference number: 6 (lower is better)
Translates to: KQSRSLRRLIVR*LLVEAITSFTV
Trigger: CACAGTGAAGGAAGTGATTGCCTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTCCTTGACTGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CTGTATGTAGGGCCGCATGGTATTGATGATCTGGTCTaGCTCATCTGCACTATAGATGTTGGGGATGTCACC +
Preference number: 6 (lower is better)
Translates to: LYVGPHGIDDLV*LICTIDVGDVT
Trigger: GGTGACATCCCCAACATCTATAGTGCAGATGAGCAAGACCAGATCATCAATACCATGCGGCCCTACATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CGCAACAGCTTGTCAAGGCCACTCTTCATGCGGTTTTaGGCTGTCTTCAGTTCCATTTTCTTCTGCCCAATG +
Preference number: 6 (lower is better)
Translates to: RNSLSRPLFMRF*AVFSSIFFCPM
Trigger: CATTGGGCAGAAGAAAATGGAACTGAAGACAGCCAAAAACCGCATGAAGAGTGGCCTTGACAAGCTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TTGAGCATGTCACTAAGGGTCTGTGTGATCACCTCTAGGAGCTTGTaGTACCTAATGACCTCTTGTACCAGCACTGTGTTCATTGACTCC +
Preference number: 6 (lower is better)
Translates to: LSMSLRVCVITSRSL*YLMTSCTSTVFIDS
Trigger: GGAGTCAATGAACACAGTGCTGGTACAAGAGGTCATTAGGTACAACAAGCTCCTAGAGGTGATCACACAGACCCTTAGTGACATGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GAGCTTGAGGAGGCTCATTGTCAGGTTGCTGTTAGTTaGGGCAATCACTTCCTTCACTGTGTTCCGAACAAA +
Preference number: 6 (lower is better)
Translates to: ELEEAHCQVAVS*GNHFLHCVPNK
Trigger: TTTGTTCGGAACACAGTGAAGGAAGTGATTGCCTCAACTAACAGCAACCTGACAATGAGCCTCCTCAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GATGCGTTTCTTGCTGACTTCATCCATCTCAATGAATaGCAGGTAGTTGAAGTGGCGTGTCAGCCTTGGAGT +
Preference number: 6 (lower is better)
Translates to: DAFLADFIHLNE*QVVEVACQPWS
Trigger: ACTCCAAGGCTGACACGCCACTTCAACTACCTGTCATTCATTGAGATGGATGAAGTCAGCAAGAAACGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp ACTCTCACTGGTGATGAGCTCATAAGACTTTACATCTaGGCCTGGCGACATGAAGTCCCCATAAAGAATGGG +
Preference number: 6 (lower is better)
Translates to: TLTGDELIRLYI*AWRHEVPIKNG
Trigger: CCCATTCTTTATGGGGACTTCATGTCGCCAGGCTCAGATGTAAAGTCTTATGAGCTCATCACCAGTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp AGGGGCCCAAATTTACGGCGTTCAAGTGCATTTCCATaGAACAAACACAGAGATAGCAGCAGGGACTTGAAC +
Preference number: 6 (lower is better)
Translates to: RGPNLRRSSAFP*NKHRDSSRDLN
Trigger: GTTCAAGTCCCTGCTGCTATCTCTGTGTTTGTTTCATGGAAATGCACTTGAACGCCGTAAATTTGGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CAGGCTGGGATGTCCTTGAACTGCTTCACACATTTGTaGATGGTCTTGAACGACTCAATGACATTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QAGMSLNCFTHL*MVLNDSMTFFS
Trigger: GGAGAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATGTGTGAAGCAGTTCAAGGACATCCCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TGGAGAATGGCATTAAATAAGGCAAACGTCTCATTCTaGGCAAAGGTGATGTTGGCGTTGTCATGCAGACCG +
Preference number: 6 (lower is better)
Translates to: WRMALNKANVSF*AKVMLALSCRP
Trigger: CGGTCTGCATGACAACGCCAACATCACCTTTGCCCAGAATGAGACGTTTGCCTTATTTAATGCCATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp TTTGTCACCTCTTGCAATTCAATAGGCCCGGGAACCTaGAGCAGAATATTCTCAGCCACATCTTCTACCAAC +
Preference number: 6 (lower is better)
Translates to: FVTSCNSIGPGT*SRIFSATSSTN
Trigger: GTTGGTAGAAGATGTGGCTGAGAATATTCTGCTCCAGGTTCCCGGGCCTATTGAATTGCAAGAGGTGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCAGGAATGACGAATGAGTCAACTTTTGGGGTGAACTaGTCGAGGTCAGCTTGGCGAATCAAATTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: SGMTNESTFGVN*SRSAWRIKFWD
Trigger: GTCCCAGAATTTGATTCGCCAAGCTGACCTCGACAAGTTCACCCCAAAAGTTGACTCATTCGTCATTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATATCCAGCATAGAAGTGGCCAGGGCCTTGCGTTTTTaGGACAGGCTCTGCTTAACATTGTCGACATTGATG +
Preference number: 6 (lower is better)
Translates to: ISSIEVARALRF*DRLCLTLSTLM
Trigger: CATCAATGTCGACAATGTTAAGCAGAGCCTGTCCAAAAAACGCAAGGCCCTGGCCACTTCTATGCTGGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TGGCAGGCTGGGATGTCCTTGAACTGCTTCACACATTaGTGCATGGTCTTGAACGACTCAATGACATTCTTC +
Preference number: 6 (lower is better)
Translates to: WQAGMSLNCFTH*CMVLNDSMTFF
Trigger: GAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATGTGTGAAGCAGTTCAAGGACATCCCAGCCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GTGAGGAAGTGGCTGATATATTCCAGTGGCAGGTACTaGAGAAGCTTGTTAGAGACTGTGAGCGTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: VRKWLIYSSGRY*RSLLETVSVFP
Trigger: AGGAAAGACGCTCACAGTCTCTAACAAGCTTCTCAAGTACCTGCCACTGGAATATATCAGCCACTTCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp TCACTAAGGGTCTGTGTGATCACCTCTAGGAGCTTGTaGTACCTAATGACCTCTTGTACCAGCACTGTGTTC +
Preference number: 6 (lower is better)
Translates to: SLRVCVITSRSL*YLMTSCTSTVF
Trigger: GAACACAGTGCTGGTACAAGAGGTCATTAGGTACAACAAGCTCCTAGAGGTGATCACACAGACCCTTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp TTAAATAAGGCAAACGTCTCATTCTGGGCAAAGGTGATGTTGGCGTaGTCATGCAGACCGAAAATCTCAGGCATGTCATTGAGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: LNKANVSFWAKVMLA*SCRPKISGMSLRGR
Trigger: CCTTCCTCTCAATGACATGCCTGAGATTTTCGGTCTGCATGACAACGCCAACATCACCTTTGCCCAGAATGAGACGTTTGCCTTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TCTCATCCTCTTCTTCATCATCATCCTCAGTGCTACTaGTTCCTGCGTCATCCAGTCTGTAATCGTACACCA +
Preference number: 6 (lower is better)
Translates to: SHPLLHHHPQCY*FLRHPVCNRTP
Trigger: TGGTGTACGATTACAGACTGGATGACGCAGGAATCAGTAGCACTGAGGATGATGATGAAGAAGAGGATGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp TTCCATGAAACAAACACAGAGATAGCAGCAGGGACTTaGACTCCACTACCTTTTGACAGGAGTGGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: FHETNTEIAAGT*TPLPFDRSGGS
Trigger: ACTTCCTCCACTCCTGTCAAAAGGTAGTGGAGTTCAAGTCCCTGCTGCTATCTCTGTGTTTGTTTCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp ATGGTCTTGAACGACTCAATGACATTCTTCTCCAGCTaGTCAGCATCAATGGCTGACAGAGGATCATTCATC +
Preference number: 6 (lower is better)
Translates to: MVLNDSMTFFSS*SASMADRGSFI
Trigger: GATGAATGATCCTCTGTCAGCCATTGATGCTGAGCAGCTGGAGAAGAATGTCATTGAGTCGTTCAAGACCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CCA 72 bp ACTCTTCATTATCAAACACCTTCAGTGGGAGATATATaGGGAAGAGTGGATCACGGCCCTGTTCGATGGTTT +
Preference number: 6 (lower is better)
Translates to: TLHYQTPSVGDI*GRVDHGPVRWF
Trigger: AAACCATCGAACAGGGCCGTGATCCACTCTTCCCCATATATCTCCCACTGAAGGTGTTTGATAATGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATGCTGCGGAACTCCTCACAGATACTGTCTACCTCCTaGTGTAAGTTCTTGGCTAGGATATCCAGCATAGAA +
Preference number: 6 (lower is better)
Translates to: MLRNSSQILSTS*CKFLARISSIE
Trigger: TTCTATGCTGGATATCCTAGCCAAGAACTTACACAAGGAGGTAGACAGTATCTGTGAGGAGTTCCGCAGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp CTTTCCTTAATTTCTGATGACGCCTCGGGCAACACCTaGAAATCAAAGGTGATGGTGTCGATAGAGATGACG +
Preference number: 6 (lower is better)
Translates to: LSLISDDASGNT*KSKVMVSIEMT
Trigger: CGTCATCTCTATCGACACCATCACCTTTGATTTCAAGGTGTTGCCCGAGGCGTCATCAGAAATTAAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp ATGGCATTAAATAAGGCAAACGTCTCATTCTGGGCAAAGGTGATGTaGGCGTTGTCATGCAGACCGAAAATCTCAGGCATGTCATTGAGA +
Preference number: 6 (lower is better)
Translates to: MALNKANVSFWAKVM*ALSCRPKISGMSLR
Trigger: TCTCAATGACATGCCTGAGATTTTCGGTCTGCATGACAACGCCAACATCACCTTTGCCCAGAATGAGACGTTTGCCTTATTTAATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS TCA 72 bp GAGGTCCAGGTATGGTTGGAATTCCTTCACCATTCTTaGGAGCTTGTCATAATTGGTGATAGGCAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: EVQVWLEFLHHS*ELVIIGDRQAK
Trigger: TTTGGCTTGCCTATCACCAATTATGACAAGCTCTCAAGAATGGTGAAGGAATTCCAACCATACCTGGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS GCA 72 bp CTCATTGTCGATATATGGCTGGATGGCTTTGATAACTaGCTCCCCAATGTTGTCCTTGTCAAACTTGAAGAG +
Preference number: 6 (lower is better)
Translates to: LIVDIWLDGFDN*LPNVVLVKLEE
Trigger: CTCTTCAAGTTTGACAAGGACAACATTGGGGAGGCAGTTATCAAAGCCATCCAGCCATATATCGACAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp ATGTCCTTGAACTGCTTCACACATTTGTGCATGGTCTaGAACGACTCAATGACATTCTTCTCCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: MSLNCFTHLCMV*NDSMTFFSSCS
Trigger: TGAGCAGCTGGAGAAGAATGTCATTGAGTCGTTCAAGACCATGCACAAATGTGTGAAGCAGTTCAAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp GGGTCTTGGGGTCAGGATTTAGGGGATTTCTTTCTGGATGATAATTaGATTCTTGTAATATCTTCTCCAGGTCATGGCTTTCAGGAACCT +
Preference number: 6 (lower is better)
Translates to: GSWGQDLGDFFLDDN*ILVISSPGHGFQEP
Trigger: AGGTTCCTGAAAGCCATGACCTGGAGAAGATATTACAAGAATCAAATTATCATCCAGAAAGAAATCCCCTAAATCCTGACCCCAAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp AGGAAGAGTCACATAGGAGAATGTCTCTGGGTTAGAAGAGACAATTaGGTCAAAGTTGATCTTGTTCATGCTACGTTCGTAGTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: RKSHIGECLWVRRDN*VKVDLVHATFVVQV
Trigger: AACCTGGACTACGAACGTAGCATGAACAAGATCAACTTTGACCAAATTGTCTCTTCTAACCCAGAGACATTCTCCTATGTGACTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 90 bp CTGTTAGTTGAGGCAATCACTTCCTTCACTGTGTTCCGAACAAAGTaGATGGAATTCTCCAGGTACTTGGTAAAGAGACTCTTGAACTGT +
Preference number: 6 (lower is better)
Translates to: LLVEAITSFTVFRTK*MEFSRYLVKRLLNC
Trigger: ACAGTTCAAGAGTCTCTTTACCAAGTACCTGGAGAATTCCATCAACTTTGTTCGGAACACAGTGAAGGAAGTGATTGCCTCAACTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8
CDS CAA 72 bp GGTCAGGATTTAGGGGATTTCTTTCTGGATGATAATTaGATTCTTGTAATATCTTCTCCAGGTCATGGCTTT +
Preference number: 6 (lower is better)
Translates to: GQDLGDFFLDDN*ILVISSPGHGF
Trigger: AAAGCCATGACCTGGAGAAGATATTACAAGAATCAAATTATCATCCAGAAAGAAATCCCCTAAATCCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048603.8