Pregenerated sensors for DLX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023391Ensembl transcript IDs: ENSMUST00000024159.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTaGCCCCGCTCAGGGCCTGAAGAGACCAAGGACCCTGAGGATCAC | + |
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Preference number: 1 (lower is better) Translates to: LRAGKPRGRGRRPSA*PRSGPEETKDPEDH Trigger: GTGATCCTCAGGGTCCTTGGTCTCTTCAGGCCCTGAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR CCA 90 bp | AAAACCCTCCACTGGCAATGGATGAAGGAGCTACGGGAGTGTTCCTaGGGAAAGTGGGAGGCGGGAAGAGTTGGGAGAGCTGGGAATTCT | + |
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Preference number: 1 (lower is better) Translates to: KTLHWQWMKELRECS*GKWEAGRVGRAGNS Trigger: AGAATTCCCAGCTCTCCCAACTCTTCCCGCCTCCCACTTTCCCCAGGAACACTCCCGTAGCTCCTTCATCCATTGCCAGTGGAGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAAGAAGCGGACTGGAGCTaGGGCCTGGAGCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKEADWS*GLEQER Trigger: TCTCTCCTGCTCCAGGCCTCAGCTCCAGTCCGCTTC...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGATGTTCCTGGGGAAAGTaGGAGGCGGGAAGAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CGEICTDTLIYKLCIEVRCSWGK*EAGRVG Trigger: CCCAACTCTTCCCGCCTCCCACTTTCCCCAGGAACA...TCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAAAAATGTGGGGAAATCTaGACAGACACCCTTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKKCGEI*TDTLIY Trigger: GTAAATAAGGGTGTCTGTGCAGATTTCCCCACATTT...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATAGTCCTTAATTCATCTGCTGCTCCGTGGCAGTaGGAGAAGTGGCTCCACGAC | + |
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Preference number: 2 (lower is better) Translates to: PLFTNSASKFELIVLNSSAAPWQ*EKWLHD Trigger: GTCGTGGAGCCACTTCTCGCACTGCCACGGAGCAGC...AGATGAATTAAGGACTATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAATGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAACTACGGGAGTGTTCCTaGGGAAAGTGGGAGGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: NKCGEICTDTLIYKLCIELRECS*GKWEAG Trigger: TCCCGCCTCCCACTTTCCCCAGGAACACTCCCGTAG...TTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACATTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGATTTTTAACATCAAAATaGGGTCATCCGCAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CGEICTDTLIYKLCIEVRFLTSK*GHPQRH Trigger: GTGCCTTTGCGGATGACCTCATTTTGATGTTAAAAA...TCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGGACCCTGAGGATCACGCTGAGGGGGCTGGGAAGGGGCGACAAGTCCGAGCCAGGGACGCCAGGCTaGGCACTAAAGGATCCCACG | + |
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Preference number: 3 (lower is better) Translates to: PRTLRITLRGLGRGDKSEPGTPG*ALKDPT Trigger: CGTGGGATCCTTTAGTGCCAAGCCTGGCGTCCCTGG...CTCGGACTTGTCGCCCCTTCCCAGCCCCCTCAGCGTGATCCTCAGGGTCCTTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR CCA 72 bp | CACTGGCAATGGATGAAGGAGCTACGGGAGTGTTCCTaGGGAAAGTGGGAGGCGGGAAGAGTTGGGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: HWQWMKELRECS*GKWEAGRVGRA Trigger: AGCTCTCCCAACTCTTCCCGCCTCCCACTTTCCCCAGGAACACTCCCGTAGCTCCTTCATCCATTGCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATGGGAGGCGGGAAGAGTaGGGAGAGCTGGGAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: EICTDTLIYKLCIEVRANGRREE*GELGIL Trigger: GAGAATTCCCAGCTCTCCCAACTCTTCCCGCCTCCC...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCAGGGTTGGCGACTCCTaGGGCTTGTGCAGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESREASRAGKASQCLTPLRVGDS*GLCRLL Trigger: CAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCT...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCCGAAGGATGCAGAAGTaGCGCTGTGGCCTGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ESREASRAGKASQCLTPLRRMQK*RCGLQV Trigger: CACCTGCAGGCCACAGCGCCACTTCTGCATCCTTCG...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCACGTGCTGGAGGCGGTaGTCTGGGTCGAGTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: ESREASRAGKASQCLTPLTCWRR*SGSSAY Trigger: ATATGCACTCGACCCAGATCACCGCCTCCAGCACGT...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCTTCTGGAAGCGTCGTTaGAGGGCCGCCAGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ESREASRAGKASQCLTPLFWKRR*RAASWK Trigger: TTTCCAGCTGGCGGCCCTTCAACGACGCTTCCAGAA...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTGAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCTGCGCCTGCGGAGTCTaGGAAGGATGCAGAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ASESREASRAGKASQCLTCACGV*EGCRSG Trigger: GCCACTTCTGCATCCTTCGCAGACTCCGCAGGCGCA...GGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTCAGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GCCTCTGAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGGGTGCTGCTGGTTaGTGTAGTAGCTGCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: ASESREASRAGKASQCLTPGAAG*CSSCCP Trigger: CGGACAGCAGCTACTACACCAACCAGCAGCACCCGG...GGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTCAGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCCCGCCAGCTGGAAACTaGAGTAGATGGTGCGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: ESREASRAGKASQCLTPLPPAGN*SRWCVV Trigger: AACCACGCACCATCTACTCCAGTTTCCAGCTGGCGG...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGACCAAGGACCCTGAGGATCACGCTGAGGGGGCTGGGAAGGGGCGACAAGACTCCTGGGGCTTGTaGAGGCTGCTGTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EETKDPEDHAEGAGKGRQDSWGL*RLLLLL Trigger: CAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTC...TTGTCGCCCCTTCCCAGCCCCCTCAGCGTGATCCTCAGGGTCCTTGGTCTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGACCAAGGACCCTGAGGATCACGCTGAGGGGGCTGGGAAGGGGCGACAACTGGAGGCGGTGATCTaGGTCGAGTGCATATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EETKDPEDHAEGAGKGRQLEAVI*VECISA Trigger: GGCTGATATGCACTCGACCCAGATCACCGCCTCCAG...TTGTCGCCCCTTCCCAGCCCCCTCAGCGTGATCCTCAGGGTCCTTGGTCTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAAGGACACCGGGAGGGTTaGCGACTCCTGGGGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKGHREG*RLLGLV Trigger: CACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCC...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGTCAATAACCGAAGCGGACTGGAGCTGAGGCCTGGAGCAGGAGAGAGCCCAGGTCGTAGCTaGTTTTGGCGGAGTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TQEVNNRSGLELRPGAGESPGRS*FWRSRR Trigger: TCTCCTACTCCGCCAAAAGCAGCTACGACCTGGGCT...CTCTCCTGCTCCAGGCCTCAGCTCCAGTCCGCTTCGGTTATTGACCTCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAACAGCTCGGCTCGCTCTaGCAGGGCCAGATACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKQLGSL*QGQILG Trigger: ACCCAGTATCTGGCCCTGCCAGAGCGAGCCGAGCTG...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAAAAGGAGGAGAAGCGCTaGCTCCAGGGTGCTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKKEEKR*LQGAAR Trigger: CCGAGCAGCACCCTGGAGCCAGCGCTTCTCCTCCTT...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR TCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAATGTCCGGCTCGTTGTTaGCCGGAGACGAACTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKCPARC*PETNWC Trigger: GCACCAGTTCGTCTCCGGTCAACAACGAGCCGGACA...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAATGCTGTTGCTGCTGCTaGTGTTGCTGTTGCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKCCCCC*CCCCRQ Trigger: CTGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCA...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATAGGCCGAGGCGGCGCTaGTCGGGCTGGAGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EICTDTLIYKLCIEVRANRPRRR*SGWSQS Trigger: GCTCTGGCTCCAGCCCGAGCAGCGCCGCCTCGGCCT...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGATGTGGCCTGCAGGTGTaGAGCGGAGCCCGAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CGEICTDTLIYKLCIEVRCGLQV*SGARSL Trigger: CAGGCTTCGGGCTCCGCTTCACACCTGCAGGCCACA...TCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGTCACTGCTACGTCGCAGCTTTCACAACTCGGGGGCGGTTTACAAAGGAAACTGGAGTAGATaGTGCGTGGTTTCCGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LLRSLLRRSFHNSGAVYKGNWSR*CVVSGL Trigger: AAGTCCGGAAACCACGCACCATCTACTCCAGTTTCC...TTTGTAAACCGCCCCCGAGTTGTGAAAGCTGCGACGTAGCAGTGACCTCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | CCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATAGTCCTTAATTCATCTCGGGGCGCCCCCGCCTaGGTGGTGGTGGTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: PLFTNSASKFELIVLNSSRGAPA*VVVVMV Trigger: CACCATCACCACCACCACGCAGGCGGGGGCGCCCCG...AGATGAATTAAGGACTATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATGAAGTCCCAGGATGCTaGCGCCGAGACCGGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EICTDTLIYKLCIEVRANEVPGC*RRDRRG Trigger: TCCCCGCCGGTCTCGGCGCCAGCATCCTGGGACTTC...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | TGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCAGAAGTGGCGCTGTaGCCTGCAGGTGTGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: CGEICTDTLIYKLCIEVRAEVAL*PAGVKR Trigger: CCGCTTCACACCTGCAGGCCACAGCGCCACTTCTGC...TCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATCCGGAGACGAACTGGTaGCGTAGGGCGCGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EICTDTLIYKLCIEVRANPETNW*RRARRR Trigger: CCTCCTACGCGCCCTACGGCACCAGTTCGTCTCCGG...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | AATAAATGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGGGGGCTGCTGGTGCTaGTGGTACGTGCTGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: NKCGEICTDTLIYKLCIEGGCWC*WYVLEA Trigger: CGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCC...TTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACATTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGTGATCTGGGTCGAGTaGATATCAGCCACCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: CGEICTDTLIYKLCIEVRVIWVE*ISATRL Trigger: CAGTCTGGTGGCTGATATGCACTCGACCCAGATCAC...TCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACCTCGGGGGCTGCTGGTaGTGGTGGTACGTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NPQIPCISRTKTLGQDKNLGGCW*WWYVLE Trigger: CTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAG...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACTGCTGCTGCTGCTGTTaGTGTTGCCGCCAGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: NPQIPCISRTKTLGQDKNCCCCC*CCRQGR Trigger: CCGGCCCTGGCGGCAACAGCAACAGCAGCAGCAGCA...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR GCA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACGGAGTCTGCGAAGGATaGAGAAGTGGCGCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NPQIPCISRTKTLGQDKNGVCEG*RSGAVA Trigger: GGCCACAGCGCCACTTCTGCATCCTTCGCAGACTCC...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACCAGGGTGCTGCTCGGTaGGTATCTCGCCGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NPQIPCISRTKTLGQDKNQGAAR*VSRRFS Trigger: GGAAAAGCGGCGAGATACCCACCGAGCAGCACCCTG...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CCA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATGGAGTAGATGGTGCGTaGTTTCCGGACTTTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: EICTDTLIYKLCIEVRANGVDGA*FPDFLW Trigger: CCAAAGAAAGTCCGGAAACCACGCACCATCTACTCC...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR TCA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACTTTTCCACATCTTCTTaGACTTGGATCGGCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NPQIPCISRTKTLGQDKNFSTSS*TWIGGS Trigger: AGAACCGCCGATCCAAGTTCAAGAAGATGTGGAAAA...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 90 bp | CGGGCCGCCGCCAGCCATCCGCTGCGGCGCGCCGAAGTCCCAGGATaGTGGCGCCGAGACCGGCGGGGAGGCACAAGGAGGAGAAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: RAAASHPLRRAEVPG*WRRDRRGGTRRRSA Trigger: AGCGCTTCTCCTCCTTGTGCCTCCCCGCCGGTCTCGGCGCCAGCATCCTGGGACTTCGGCGCGCCGCAGCGGATGGCTGGCGGCGGCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | GCCGCCGCCAGCCATCCGCTGCGGCGCGCCGAAGTCCCAGGATGCTaGCGCCGAGACCGGCGGGGAGGCACAAGGAGGAGAAGCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AAASHPLRRAEVPGC*RRDRRGGTRRRSAG Trigger: GCCAGCGCTTCTCCTCCTTGTGCCTCCCCGCCGGTCTCGGCGCCAGCATCCTGGGACTTCGGCGCGCCGCAGCGGATGGCTGGCGGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCCGGGAAGCCTCGAGGGCGGGGAAGGCGTCCCAGTGCCTGACCCCGCTCCTGCTGCTGTTGCTGTaGCCGCCAGGGCCGGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: ESREASRAGKASQCLTPLLLLLL*PPGPAP Trigger: GGGCGCCGGCCCTGGCGGCAACAGCAACAGCAGCAG...GAGCGGGGTCAGGCACTGGGACGCCTTCCCCGCCCTCGAGGCTTCCCGGCTCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | CCGCCAGGGCCGGCGCCCGCACCGCTCGGGGGCTGCTGGTGCTGGTaGTACGTGCTGGAGGCGGTGATCTGGGTCGAGTGCATATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PPGPAPAPLGGCWCW*YVLEAVIWVECISA Trigger: GGCTGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTGCGGGCGCCGGCCCTGGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | TTGCTGTTGCCGCCAGGGCCGGCGCCCGCACCGCTCGGGGGCTGCTaGTGCTGGTGGTACGTGCTGGAGGCGGTGATCTGGGTCGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LLLPPGPAPAPLGGC*CWWYVLEAVIWVEC Trigger: GCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTGCGGGCGCCGGCCCTGGCGGCAACAGCAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 90 bp | CTGTTGCCGCCAGGGCCGGCGCCCGCACCGCTCGGGGGCTGCTGGTaGTGGTGGTACGTGCTGGAGGCGGTGATCTGGGTCGAGTGCATA | + |
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Preference number: 5 (lower is better) Translates to: LLPPGPAPAPLGGCW*WWYVLEAVIWVECI Trigger: TATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTGCGGGCGCCGGCCCTGGCGGCAACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | TTGCCGCCAGGGCCGGCGCCCGCACCGCTCGGGGGCTGCTGGTGCTaGTGGTACGTGCTGGAGGCGGTGATCTGGGTCGAGTGCATATCA | + |
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Preference number: 5 (lower is better) Translates to: LPPGPAPAPLGGCWC*WYVLEAVIWVECIS Trigger: TGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTGCGGGCGCCGGCCCTGGCGGCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 90 bp | TCCGTAGCCGTGGACACCGGGAGGGTTGGCGACTCCTGGGGCTTGTaGAGGCTGCTGTTGCTGCTGCTGCTGTTGCTGTTGCCGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SVAVDTGRVGDSWGL*RLLLLLLLLLLPPG Trigger: CCCTGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGCTACGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | ATGCTGGCGCCGAGACCGGCGGGGAGGCACAAGGAGGAGAAGCGCTaGCTCCAGGGTGCTGCTCGGTGGGTATCTCGCCGCTTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: MLAPRPAGRHKEEKR*LQGAARWVSRRFST Trigger: TGTGGAAAAGCGGCGAGATACCCACCGAGCAGCACCCTGGAGCCAGCGCTTCTCCTCCTTGTGCCTCCCCGCCGGTCTCGGCGCCAGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | CCAAGGACCCTGAGGATCACGCTGAGGGGGCTGGGAAGGGGCGACAAGTCCGAGTGGACACCGGGAGGGTaGGCGACTCCTGGGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PRTLRITLRGLGRGDKSEWTPGG*ATPGAC Trigger: ACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCA...CTCGGACTTGTCGCCCCTTCCCAGCCCCCTCAGCGTGATCCTCAGGGTCCTTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | GATGGTGCGCCTGCGGAGTCTGCGAAGGATGCAGAAGTGGCGCTGTaGCCTGCAGGTGTGAAGCGGAGCCCGAAGCCTGGTGGTACCACG | + |
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Preference number: 5 (lower is better) Translates to: DGAPAESAKDAEVAL*PAGVKRSPKPGGTT Trigger: CGTGGTACCACCAGGCTTCGGGCTCCGCTTCACACCTGCAGGCCACAGCGCCACTTCTGCATCCTTCGCAGACTCCGCAGGCGCACCATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS TCA 90 bp | CGGAGTCTGCGAAGGATGCAGAAGTGGCGCTGTGGCCTGCAGGTGTaGAGCGGAGCCCGAAGCCTGGTGGTACCACGGGTAGTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSLRRMQKWRCGLQV*SGARSLVVPRVVSQ Trigger: CTGGGAAACTACCCGTGGTACCACCAGGCTTCGGGCTCCGCTTCACACCTGCAGGCCACAGCGCCACTTCTGCATCCTTCGCAGACTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | GTTGGTGTAGTAGCTGCTGTCCGTAGCCGTGGACACCGGGAGGGTTaGCGACTCCTGGGGCTTGTGCAGGCTGCTGTTGCTGCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VGVVAAVRSRGHREG*RLLGLVQAAVAAAA Trigger: AGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGCTACGGACAGCAGCTACTACACCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS TCA 90 bp | CACCGCTCGGGGGCTGCTGGTGCTGGTGGTACGTGCTGGAGGCGGTaGTCTGGGTCGAGTGCATATCAGCCACCAGACTGTCAAAGACTC | + |
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Preference number: 5 (lower is better) Translates to: HRSGAAGAGGTCWRR*SGSSAYQPPDCQRL Trigger: GAGTCTTTGACAGTCTGGTGGCTGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 90 bp | GAGACCGGCGGGGAGGCACAAGGAGGAGAAGCGCTGGCTCCAGGGTaGTGCTCGGTGGGTATCTCGCCGCTTTTCCACATCTTCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: ETGGEAQGGEALAPG*CSVGISPLFHIFLN Trigger: GTTCAAGAAGATGTGGAAAAGCGGCGAGATACCCACCGAGCAGCACCCTGGAGCCAGCGCTTCTCCTCCTTGTGCCTCCCCGCCGGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 90 bp | CTCGGGGGCTGCTGGTGCTGGTGGTACGTGCTGGAGGCGGTGATCTaGGTCGAGTGCATATCAGCCACCAGACTGTCAAAGACTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LGGCWCWWYVLEAVI*VECISATRLSKTPV Trigger: GACTGGAGTCTTTGACAGTCTGGTGGCTGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | CCAAGGACCCTGAGGATCACGCTGAGGGGGCTGGGAAGGGGCGACAAGTCCGAGCTTTTCCACATCTTCTaGAACTTGGATCGGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PRTLRITLRGLGRGDKSELFHIF*NLDRRF Trigger: GAACCGCCGATCCAAGTTCAAGAAGATGTGGAAAAG...CTCGGACTTGTCGCCCCTTCCCAGCCCCCTCAGCGTGATCCTCAGGGTCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAGGTCAATAACCGAAGCGGACTGGAGCTGAGGCCTGGAGCAGGAGAGGTTTCCGGACTTTCTTaGGCTTCCCGTTCACTATTC | + |
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Preference number: 5 (lower is better) Translates to: TQEVNNRSGLELRPGAGEVSGLS*ASRSLF Trigger: GAATAGTGAACGGGAAGCCAAAGAAAGTCCGGAAAC...CTCTCCTGCTCCAGGCCTCAGCTCCAGTCCGCTTCGGTTATTGACCTCCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | GAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAAGTTCGAGCTAATTTGCTGCTGCTGCTGTaGCTGTTGCCGCCAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: EICTDTLIYKLCIEVRANLLLLL*LLPPGP Trigger: CGGCCCTGGCGGCAACAGCAACAGCAGCAGCAGCAA...ATTAGCTCGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | AATAAATGTGGGGAAATCTGCACAGACACCCTTATTTACAAACTCTGCATCGAATTGTCCGGCTCGTTGTaGACCGGAGACGAACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: NKCGEICTDTLIYKLCIELSGSL*TGDELV Trigger: CACCAGTTCGTCTCCGGTCAACAACGAGCCGGACAA...TTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCCACATTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS-3UTR CAA 90 bp | AACCCCCAAATACCTTGCATTTCAAGAACAAAGACTTTAGGACAAGATAAAAACGATTTTGACCTGAGTTaGGGTGAGGCCCAGGGACGC | + |
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Preference number: 5 (lower is better) Translates to: NPQIPCISRTKTLGQDKNDFDLS*GEAQGR Trigger: GCGTCCCTGGGCCTCACCCAAACTCAGGTCAAAATC...GTTTTTATCTTGTCCTAAAGTCTTTGTTCTTGAAATGCAAGGTATTTGGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 72 bp | GCCAGCCATCCGCTGCGGCGCGCCGAAGTCCCAGGATaGTGGCGCCGAGACCGGCGGGGAGGCACAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASHPLRRAEVPG*WRRDRRGGTRR Trigger: CCTCCTTGTGCCTCCCCGCCGGTCTCGGCGCCAGCATCCTGGGACTTCGGCGCGCCGCAGCGGATGGCTGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | CCGGCGCCCGCACCGCTCGGGGGCTGCTGGTGCTGGTaGTACGTGCTGGAGGCGGTGATCTGGGTCGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: PAPAPLGGCWCW*YVLEAVIWVEC Trigger: GCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCCCGAGCGGTGCGGGCGCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 72 bp | ACCACGGGTAGTTTCCCAGAAAGGCCGAGGCGGCGCTaGTCGGGCTGGAGCCAGAGCTGCCCGCACCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TTGSFPERPRRR*SGWSQSCPHRR Trigger: GCGGCGGTGCGGGCAGCTCTGGCTCCAGCCCGAGCAGCGCCGCCTCGGCCTTTCTGGGAAACTACCCGTGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CAA 72 bp | TTGTGCAGGCTGCTGTTGCTGCTGCTGCTGTTGCTGTaGCCGCCAGGGCCGGCGCCCGCACCGCTCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LCRLLLLLLLLL*PPGPAPAPLGG Trigger: GCCCCCGAGCGGTGCGGGCGCCGGCCCTGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | CCGAGACCGGCGGGGAGGCACAAGGAGGAGAAGCGCTaGCTCCAGGGTGCTGCTCGGTGGGTATCTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRPAGRHKEEKR*LQGAARWVSRR Trigger: GCGGCGAGATACCCACCGAGCAGCACCCTGGAGCCAGCGCTTCTCCTCCTTGTGCCTCCCCGCCGGTCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CAA 90 bp | GACACCGGGAGGGTTGGCGACTCCTGGGGCTTGTGCAGGCTGCTGTaGCTGCTGCTGCTGTTGCTGTTGCCGCCAGGGCCGGCGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: DTGRVGDSWGLCRLL*LLLLLLLPPGPAPA Trigger: TGCGGGCGCCGGCCCTGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | TCCGTAGCCGTGGACACCGGGAGGGTTGGCGACTCCTaGGGCTTGTGCAGGCTGCTGTTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVAVDTGRVGDS*GLCRLLLLLLL Trigger: CAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGCTACGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CAA 72 bp | AGGGTTGGCGACTCCTGGGGCTTGTGCAGGCTGCTGTaGCTGCTGCTGCTGTTGCTGTTGCCGCCAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RVGDSWGLCRLL*LLLLLLLPPGP Trigger: CGGCCCTGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CAA 72 bp | GCCGTGGACACCGGGAGGGTTGGCGACTCCTGGGGCTaGTGCAGGCTGCTGTTGCTGCTGCTGCTGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: AVDTGRVGDSWG*CRLLLLLLLLL Trigger: CAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CAA 90 bp | CTGTCCGTAGCCGTGGACACCGGGAGGGTTGGCGACTCCTGGGGCTaGTGCAGGCTGCTGTTGCTGCTGCTGCTGTTGCTGTTGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSVAVDTGRVGDSWG*CRLLLLLLLLLLPP Trigger: TGGCGGCAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGCTACGGACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | GTAGCTGCTGTCCGTAGCCGTGGACACCGGGAGGGTTaGCGACTCCTGGGGCTTGTGCAGGCTGCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VAAVRSRGHREG*RLLGLVQAAVA Trigger: AGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCACGGCTACGGACAGCAGCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | CCTGCGGAGTCTGCGAAGGATGCAGAAGTGGCGCTGTaGCCTGCAGGTGTGAAGCGGAGCCCGAAGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PAESAKDAEVAL*PAGVKRSPKPG Trigger: ACCAGGCTTCGGGCTCCGCTTCACACCTGCAGGCCACAGCGCCACTTCTGCATCCTTCGCAGACTCCGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS TCA 72 bp | CGAAGGATGCAGAAGTGGCGCTGTGGCCTGCAGGTGTaGAGCGGAGCCCGAAGCCTGGTGGTACCACGGGTA | + |
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Preference number: 6 (lower is better) Translates to: RRMQKWRCGLQV*SGARSLVVPRV Trigger: TACCCGTGGTACCACCAGGCTTCGGGCTCCGCTTCACACCTGCAGGCCACAGCGCCACTTCTGCATCCTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS GCA 72 bp | GTGGACACCGGGAGGGTTGGCGACTCCTGGGGCTTGTaGAGGCTGCTGTTGCTGCTGCTGCTGTTGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VDTGRVGDSWGL*RLLLLLLLLLL Trigger: CAACAGCAACAGCAGCAGCAGCAACAGCAGCCTGCACAAGCCCCAGGAGTCGCCAACCCTCCCGGTGTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS TCA 72 bp | GGGGCTGCTGGTGCTGGTGGTACGTGCTGGAGGCGGTaGTCTGGGTCGAGTGCATATCAGCCACCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: GAAGAGGTCWRR*SGSSAYQPPDC Trigger: ACAGTCTGGTGGCTGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS TCA 72 bp | TTTCAGGCTCAAGGTCTTCCTTGTCCGGCTCGTTGTTaGCCGGAGACGAACTGGTGCCGTAGGGCGCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: FQAQGLPCPARC*PETNWCRRARR Trigger: CCTACGCGCCCTACGGCACCAGTTCGTCTCCGGTCAACAACGAGCCGGACAAGGAAGACCTTGAGCCTGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | TGCTGGTGCTGGTGGTACGTGCTGGAGGCGGTGATCTaGGTCGAGTGCATATCAGCCACCAGACTGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: CWCWWYVLEAVI*VECISATRLSK Trigger: CTTTGACAGTCTGGTGGCTGATATGCACTCGACCCAGATCACCGCCTCCAGCACGTACCACCAGCACCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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| CDS CCA 72 bp | TCTGGAAGCGTCGTTGAAGGGCCGCCAGCTGGAAACTaGAGTAGATGGTGCGTGGTTTCCGGACTTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSVVEGPPAGN*SRWCVVSGLSL Trigger: CAAAGAAAGTCCGGAAACCACGCACCATCTACTCCAGTTTCCAGCTGGCGGCCCTTCAACGACGCTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024159.8 |
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